Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ADD3	120	genome.wustl.edu	37	10	111860581	111860581	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	111860581	111860581	G	A	SNP	ADD3	NM_016824	human	genbank	57_37b	+1	reviewed	missense	c.170	p.R57Q	1.000	NULL	superfamily_AraD-like aldolase/epimerase,HMMPfam_Aldolase_II	-	no_errors	
AKAP4	8852	genome.wustl.edu	37	X	49957446	49957446	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49957446	49957446	C	G	SNP	AKAP4	NM_003886	human	genbank	57_37b	-1	reviewed	missense	c.1918	p.E640Q	0.170	HMMSmart_SM00807,HMMPfam_AKAP_110	HMMSmart_SM00807,HMMPfam_RII_binding_1,HMMPfam_AKAP_110	-	no_errors	
AOX1	316	genome.wustl.edu	37	2	201478612	201478612	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	201478612	201478612	G	C	SNP	AOX1	NM_001159	human	genbank	57_37b	+1	reviewed	missense	c.1534	p.V512L	0.999	superfamily_CO dehydrogenase flavoprotein C-terminal domain-like,HMMPfam_CO_deh_flav_C	superfamily_2Fe-2S ferredoxin-like,HMMPfam_Fer2,PatternScan_2FE2S_FER_1,HMMPfam_Fer2_2,superfamily_CO dehydrogenase ISP C-domain like,superfamily_FAD-binding domain,HMMPfam_FAD_binding_5,superfamily_CO dehydrogenase flavoprotein C-terminal domain-like,HMMPfam_CO_deh_flav_C,superfamily_CO dehydrogenase molybdoprotein N-domain-like,HMMPfam_Ald_Xan_dh_C,superfamily_Molybdenum cofactor-binding domain,HMMPfam_Ald_Xan_dh_C2,PatternScan_MOLYBDOPTERIN_EUK	-	no_errors	
AQP12B	285192	genome.wustl.edu	37	2	241621869	241621869	+	Missense_Mutation	SNP	G	G	A	rs74882485	byFrequency	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	241621869	241621869	G	A	SNP	AQP12B	NM_001102467	human	genbank	57_37b	-1	validated	missense	c.386	p.T129M	0.017	superfamily_MIP	superfamily_MIP	-		
BAZ1B	9031	genome.wustl.edu	37	7	72892315	72892315	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	72892315	72892315	C	A	SNP	BAZ1B	NM_032408	human	genbank	57_37b	-1	validated	missense	c.1476	p.R492S	1.000	NULL	HMMPfam_WAC_Acf1_DNA_bd,HMMSmart_SM00571,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
C14orf38	729665	genome.wustl.edu	37	14	60011922	60011922	+	Silent	SNP	C	T	T	rs113568656	byCluster;by1000genomes	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	60011922	60011922	C	T	SNP	C14orf38	ENST00000281581	human	ensembl	57_37b	-1	known	silent	c.1131	p.E377	0.052	NULL	NULL	-		
C14orf48	256369	genome.wustl.edu	37	14	94464432	94464432	+	RNA	SNP	A	A	G	rs733166	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	94464432	94464432	A	G	SNP	C14orf48	NR_024182	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.099	-	-	-		
CEP290	80184	genome.wustl.edu	37	12	88514773	88514773	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	88514773	88514773	C	A	SNP	CEP290	NM_025114	human	genbank	57_37b	-1	reviewed	splice_site	c.1359+1	e13+1	1.000	-	-	-	no_errors	
CFH	3075	genome.wustl.edu	37	1	196648903	196648903	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	196648903	196648903	G	A	SNP	CFH	NM_000186	human	genbank	57_37b	+1	reviewed	missense	c.770	p.R257H	0.001	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
CITED1	4435	genome.wustl.edu	37	X	71521748	71521748	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	71521748	71521748	A	G	SNP	CITED1	NM_001144885	human	genbank	57_37b	-1	reviewed	missense	c.485	p.L162P	0.000	HMMPfam_CITED	HMMPfam_CITED	-	no_errors	
COL22A1	169044	genome.wustl.edu	37	8	139675984	139675984	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	139675984	139675984	C	A	SNP	COL22A1	NM_152888	human	genbank	57_37b	-1	validated	splice_site	c.3151-1	e41-1	0.973	-	-	-	no_errors	
COL4A5	1287	genome.wustl.edu	37	X	107829952	107829952	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	107829952	107829952	T	C	SNP	COL4A5	NM_033380	human	genbank	57_37b	+1	reviewed	silent	c.1140	p.G380	1.000	HMMPfam_Collagen	HMMPfam_Collagen,superfamily_C-type_lectin_fold,HMMPfam_C4,HMMSmart_C4	-	no_errors	
EPAS1	2034	genome.wustl.edu	37	2	46588075	46588075	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	46588075	46588075	A	G	SNP	EPAS1	NM_001430	human	genbank	57_37b	+1	reviewed	missense	c.625	p.N209D	0.678	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH,HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS_3,HMMSmart_PAC,HMMPfam_HIF-1a_CTAD	-	no_errors	
EPPK1	83481	genome.wustl.edu	37	8	144946345	144946345	+	Silent	SNP	G	A	A	rs34753358	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	144946345	144946345	G	A	SNP	EPPK1	NM_031308	human	genbank	57_37b	-1	validated	silent	c.1077	p.A359	0.992	superfamily_Plakin repeat,HMMPfam_Plectin,HMMSmart_SM00250	HMMSmart_SM00250,superfamily_Plakin repeat,HMMPfam_Plectin	-		
FAM47B	170062	genome.wustl.edu	37	X	34961802	34961802	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	34961802	34961802	C	T	SNP	FAM47B	NM_152631	human	genbank	57_37b	+1	predicted	missense	c.854	p.P285L	0.874	NULL	NULL	-	no_errors	
FREM2	341640	genome.wustl.edu	37	13	39450219	39450219	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	39450219	39450219	G	A	SNP	FREM2	NM_207361	human	genbank	57_37b	+1	reviewed	missense	c.8342	p.R2781H	0.995	NULL	HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors	
GPR156	165829	genome.wustl.edu	37	3	119886712	119886712	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	119886712	119886712	G	A	SNP	GPR156	NM_153002	human	genbank	57_37b	-1	validated	missense	c.1612	p.R538W	0.000	NULL	HMMPfam_7tm_3,PatternScan_PEROXIDASE_1	-	no_errors	
KCNH4	23415	genome.wustl.edu	37	17	40328183	40328183	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40328183	40328183	C	T	SNP	KCNH4	NM_012285	human	genbank	57_37b	-1	reviewed	missense	c.718	p.V240I	1.000	superfamily_SSF81324	PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS,HMMSmart_PAC,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	-	no_errors	
LHX9	56956	genome.wustl.edu	37	1	197890729	197890729	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	197890729	197890729	G	A	SNP	LHX9	NM_020204	human	genbank	57_37b	+1	reviewed	missense	c.673	p.G225R	1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
LOC440043	440043	genome.wustl.edu	37	11	64943166	64943166	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64943166	64943166	G	A	SNP	LOC440043	XR_015843	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.183	-	-	-	no_errors	
MADD	8567	genome.wustl.edu	37	11	47304168	47304168	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47304168	47304168	G	T	SNP	MADD	NM_003682	human	genbank	57_37b	+1	reviewed	splice_site	c.1705+1	e8+1	1.000	-	-	-	no_errors	
MAP3K1	4214	genome.wustl.edu	37	5	56170931	56170932	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	56170931	56170932	-	T	INS	MAP3K1	NM_005921	human	genbank	57_37b	+1	validated	frame_shift_ins	c.1759_1760	p.S588fs	1.000:1.000	NULL	PatternScan_ZF_RING_1,HMMPfam_SWIM,superfamily_SSF57850,HMMSmart_RING,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
NUP210	23225	genome.wustl.edu	37	3	13368892	13368892	+	Silent	SNP	G	G	A	rs2271509	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	13368892	13368892	G	A	SNP	NUP210	NM_024923	human	genbank	57_37b	-1	reviewed	silent	c.4332	p.C1444	0.211	NULL	superfamily_Invasin/intimin cell-adhesion fragments,HMMPfam_Big_2,HMMSmart_SM00635	-		
OR14C36	127066	genome.wustl.edu	37	1	248512969	248512969	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248512969	248512969	C	T	SNP	OR14C36	NM_001001918	human	genbank	57_37b	+1	provisional	missense	c.893	p.A298V	0.089	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
PEX14	5195	genome.wustl.edu	37	1	10689942	10689942	+	Silent	SNP	G	G	T	rs11539794	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	10689942	10689942	G	T	SNP	PEX14	NM_004565	human	genbank	57_37b	+1	reviewed	silent	c.1032	p.G344	0.998	NULL	HMMPfam_Pex14_N	-		
RAD17	5884	genome.wustl.edu	37	5	68692264	68692264	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	68692264	68692264	C	T	SNP	RAD17	NM_133339	human	genbank	57_37b	+1	reviewed	missense	c.1496	p.T499M	0.996	HMMPfam_Rad17	HMMPfam_Rad17,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
RYR3	6263	genome.wustl.edu	37	15	33927942	33927942	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	33927942	33927942	C	T	SNP	RYR3	NM_001036	human	genbank	57_37b	+1	validated	silent	c.3303	p.V1101	0.003	HMMPfam_SPRY,HMMSmart_SM00449	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,HMMPfam_efhand,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors	
SCAPER	49855	genome.wustl.edu	37	15	77025641	77025641	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	77025641	77025641	T	C	SNP	SCAPER	NM_020843	human	genbank	57_37b	-1	validated	missense	c.1948	p.R650G	1.000	NULL	HMMSmart_SM00451,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
SLC7A1	6541	genome.wustl.edu	37	13	30097477	30097477	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	30097477	30097477	G	A	SNP	SLC7A1	NM_003045	human	genbank	57_37b	-1	validated	silent	c.975	p.D325	0.019	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors	
SMARCD3	6604	genome.wustl.edu	37	7	150936239	150936239	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150936239	150936239	G	-	DEL	SMARCD3	NM_001003801	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.1402	p.Q468fs	1.000	NULL	superfamily_SWIB/MDM2 domain,HMMPfam_SWIB,HMMSmart_SM00151	(deletion:cds_exon[150936189,150936242])	no_errors	
TAF1	6872	genome.wustl.edu	37	X	70627430	70627430	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70627430	70627430	C	T	SNP	TAF1	NM_004606	human	genbank	57_37b	+1	reviewed	missense	c.4174	p.H1392Y	1.000	superfamily_Bromodomain	HMMPfam_TBP-binding,superfamily_TAF_II_230,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
TEAD2	8463	genome.wustl.edu	37	19	49850509	49850509	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49850509	49850509	C	T	SNP	TEAD2	NM_003598	human	genbank	57_37b	-1	provisional	missense	c.847	p.G283S	1.000	HMMPfam_TEA	HMMPfam_TEA,HMMSmart_TEA,PatternScan_TEA_1	-	no_errors	
TGFA	7039	genome.wustl.edu	37	2	70742012	70742012	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	70742012	70742012	T	C	SNP	TGFA	NM_003236	human	genbank	57_37b	-1	validated	missense	c.73	p.N25D	1.000	NULL	superfamily_EGF/Laminin,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors	
TIMELESS	8914	genome.wustl.edu	37	12	56815795	56815795	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56815795	56815795	C	A	SNP	TIMELESS	NM_003920	human	genbank	57_37b	-1	validated	missense	c.2530	p.D844Y	1.000	HMMPfam_TIMELESS_C	HMMPfam_TIMELESS,HMMPfam_TIMELESS_C	-	no_errors	
TMEM44	93109	genome.wustl.edu	37	3	194331653	194331653	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	194331653	194331653	C	G	SNP	TMEM44	NM_138399	human	genbank	57_37b	-1	validated	missense	c.1009	p.V337L	0.721	NULL	NULL	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7579356	7579358	+	In_Frame_Del	DEL	GAC	GAC	-	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	GAC	GAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7579356	7579358	GAC	-	DEL	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	in_frame_del	c.331_329	p.R110in_frame_del	0.011:0.000:0.004	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	(deletion:cds_exon[7579312,7579590])	no_errors	
TTN	7273	genome.wustl.edu	37	2	179455719	179455719	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179455719	179455719	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	nonsense	c.53023	p.R17675*	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
WRNIP1	56897	genome.wustl.edu	37	6	2785330	2785330	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	2785330	2785330	G	A	SNP	WRNIP1	NM_020135	human	genbank	57_37b	+1	reviewed	silent	c.1812	p.L604	1.000	NULL	HMMSmart_SM00734,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	-	no_errors	
ZNF711	7552	genome.wustl.edu	37	X	84525072	84525072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AS-01A-11W-A019-09	TCGA-AN-A0AS-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	84525072	84525072	G	A	SNP	ZNF711	NM_021998	human	genbank	57_37b	+1	reviewed	missense	c.1028	p.C343Y	1.000	HMMPfam_Zfx_Zfy_act	HMMPfam_Zfx_Zfy_act,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
