Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCC10	89845	genome.wustl.edu	37	6	43412867	43412867	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43412867	43412867	C	A	SNP	ABCC10	NM_033450	human	genbank	57_37b	+1	reviewed	missense	c.2761	p.P921T	1.000	superfamily_ABC_TM_1	superfamily_ABC_TM_1,HMMPfam_ABC_membrane,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACAT2	39	genome.wustl.edu	37	6	160189602	160189602	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	160189602	160189602	C	T	SNP	ACAT2	NM_005891	human	genbank	57_37b	+1	reviewed	silent	c.432	p.D144	1.000	HMMPfam_Thiolase_N,superfamily_Thiolase-like	PatternScan_THIOLASE_1,HMMPfam_Thiolase_N,superfamily_Thiolase-like,HMMPfam_Thiolase_C,PatternScan_THIOLASE_2,PatternScan_THIOLASE_3	-	no_errors	
ADAMTS14	140766	genome.wustl.edu	37	10	72498656	72498656	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	72498656	72498656	G	T	SNP	ADAMTS14	NM_139155	human	genbank	57_37b	+1	reviewed	missense	c.1667	p.G556V	1.000	superfamily_TSP1	HMMPfam_Pep_M12B_propep,superfamily_SSF55486,HMMPfam_Reprolysin,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1	-	no_errors	
ADCY9	115	genome.wustl.edu	37	16	4057542	4057542	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4057542	4057542	T	A	SNP	ADCY9	NM_001116	human	genbank	57_37b	-1	reviewed	missense	c.1711	p.I571L	1.000	HMMPfam_Guanylate_cyc	HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors	
AEBP1	165	genome.wustl.edu	37	7	44147485	44147485	+	Missense_Mutation	SNP	C	C	A	rs2537188	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44147485	44147485	C	A	SNP	AEBP1	NM_001129	human	genbank	57_37b	+1	reviewed	missense	c.817	p.P273T	0.069	NULL	superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_Zn-dependent exopeptidases,HMMSmart_SM00631,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,superfamily_Carboxypeptidase regulatory domain	-		
AIM1	202	genome.wustl.edu	37	6	106967226	106967226	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	106967226	106967226	G	C	SNP	AIM1	NM_001624	human	genbank	57_37b	+1	validated	missense	c.919	p.A307P	1.000	NULL	superfamily_G_crystallin_SF,HMMSmart_XTALbg,HMMPfam_Crystall,superfamily_RicinB_like,HMMSmart_RICIN,HMMPfam_Ricin_B_lectin	-	no_errors	
ALMS1	7840	genome.wustl.edu	37	2	73747041	73747041	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	73747041	73747041	C	T	SNP	ALMS1	NM_015120	human	genbank	57_37b	+1	reviewed	missense	c.9676	p.H3226Y	0.000	NULL	NULL	-	no_errors	
ANKRD30A	91074	genome.wustl.edu	37	10	37490246	37490246	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	37490246	37490246	A	T	SNP	ANKRD30A	NM_052997	human	genbank	57_37b	+1	validated	missense	c.2694	p.K898N	0.001	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,PatternScan_ASP_PROTEASE	-	no_errors	
ARID3C	138715	genome.wustl.edu	37	9	34623463	34623463	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	34623463	34623463	G	A	SNP	ARID3C	NM_001017363	human	genbank	57_37b	-1	reviewed	missense	c.824	p.A275V	0.002	NULL	superfamily_ARID,HMMPfam_ARID,HMMSmart_BRIGHT	-	no_errors	
B3GALT1	8708	genome.wustl.edu	37	2	168725803	168725803	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	168725803	168725803	G	A	SNP	B3GALT1	NM_020981	human	genbank	57_37b	+1	reviewed	missense	c.254	p.S85N	1.000	NULL	HMMPfam_Galactosyl_T	-	no_errors	
BBS2	583	genome.wustl.edu	37	16	56553673	56553673	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	56553673	56553673	G	A	SNP	BBS2	NM_031885	human	genbank	57_37b	-1	reviewed	silent	c.102	p.A34	1.000	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMPfam_FG-GAP	-	no_errors	
BCL2L11	10018	genome.wustl.edu	37	2	111881572	111881572	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	111881572	111881572	A	G	SNP	BCL2L11	NM_138621	human	genbank	57_37b	+1	reviewed	missense	c.250	p.R84G	1.000	NULL	HMMPfam_Bim_N,HMMPfam_Bclx_interact	-	no_errors	
BRCA2	675	genome.wustl.edu	37	13	32936802	32936802	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	32936802	32936802	G	C	SNP	BRCA2	NM_000059	human	genbank	57_37b	+1	reviewed	missense	c.7948	p.E2650Q	1.000	superfamily_BRCA2_helical,HMMPfam_BRCA-2_helical	HMMPfam_BRCA2,superfamily_BRCA2_helical,HMMPfam_BRCA-2_helical,superfamily_Nucleic_acid_OB,HMMPfam_BRCA-2_OB1,HMMPfam_Tower,superfamily_SSF81878,HMMPfam_BRCA-2_OB3	-	no_errors	
C14orf106	55320	genome.wustl.edu	37	14	45711518	45711518	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	45711518	45711518	G	C	SNP	C14orf106	NM_018353	human	genbank	57_37b	-1	validated	missense	c.862	p.L288V	0.000	NULL	HMMPfam_SANTA,superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors	
C15orf39	56905	genome.wustl.edu	37	15	75500670	75500670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75500670	75500670	G	A	SNP	C15orf39	NM_015492	human	genbank	57_37b	+1	validated	missense	c.2281	p.D761N	0.000	NULL	NULL	-	no_errors	
C20orf117	140710	genome.wustl.edu	37	20	35444226	35444226	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	35444226	35444226	A	C	SNP	C20orf117	NM_199181	human	genbank	57_37b	-1	validated	missense	c.905	p.L302R	1.000	NULL	NULL	-	no_errors	
C20orf195	79025	genome.wustl.edu	37	20	62187736	62187736	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62187736	62187736	T	C	SNP	C20orf195	NM_024059	human	genbank	57_37b	+1	predicted	silent	c.720	p.Y240	0.033	superfamily_FN_III-like	superfamily_FN_III-like	-	no_errors	
C5orf60	285679	genome.wustl.edu	37	5	179069969	179069969	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	179069969	179069969	G	C	SNP	C5orf60	NM_001142306	human	genbank	57_37b	-1	predicted	missense	c.584	p.S195C	0.013	NULL	NULL	-	no_errors	
C6orf97	80129	genome.wustl.edu	37	6	151907108	151907108	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	151907108	151907108	A	G	SNP	C6orf97	NM_025059	human	genbank	57_37b	+1	validated	missense	c.1177	p.R393G	1.000	NULL	superfamily_Prefoldin	-	no_errors	
CACNA1B	774	genome.wustl.edu	37	9	140970316	140970316	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140970316	140970316	C	T	SNP	CACNA1B	NM_000718	human	genbank	57_37b	+1	validated	missense	c.4903	p.H1635Y	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CAD	790	genome.wustl.edu	37	2	27448725	27448725	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27448725	27448725	C	A	SNP	CAD	NM_004341	human	genbank	57_37b	+1	reviewed	missense	c.1773	p.D591E	1.000	HMMPfam_CPSase_L_D2,superfamily_SSF56059	superfamily_CP_synthsmall,HMMPfam_CPSase_sm_chain,superfamily_SSF52317,HMMPfam_GATase,superfamily_PreATP-grasp-like,HMMPfam_CPSase_L_chain,HMMPfam_CPSase_L_D2,superfamily_SSF56059,PatternScan_CPSASE_1,PatternScan_CPSASE_2,superfamily_CarbamoylP_synth_lsu_oligo,HMMPfam_CPSase_L_D3,superfamily_SSF52335,HMMPfam_MGS,HMMPfam_Amidohydro_1,superfamily_SSF51556,PatternScan_DIHYDROOROTASE_1,PatternScan_DIHYDROOROTASE_2,superfamily_Metalo_hydrolase,superfamily_Asp/Orn_carbamoyltranf,HMMPfam_OTCace_N,PatternScan_CARBAMOYLTRANSFERASE,HMMPfam_OTCace	-	no_errors	
CALCA	796	genome.wustl.edu	37	11	14989307	14989307	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	14989307	14989307	G	C	SNP	CALCA	NM_001033953	human	genbank	57_37b	-1	reviewed	missense	c.321	p.N107K	0.995	HMMPfam_Calc_CGRP_IAPP,HMMSmart_SM00113	HMMPfam_Calc_CGRP_IAPP,HMMSmart_SM00113,PatternScan_CALCITONIN	-	no_errors	
CEACAM21	90273	genome.wustl.edu	37	19	42085765	42085765	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42085765	42085765	G	A	SNP	CEACAM21	NM_001098506	human	genbank	57_37b	+1	validated	missense	c.484	p.V162M	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
CHRM2	1129	genome.wustl.edu	37	7	136700174	136700174	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	136700174	136700174	T	A	SNP	CHRM2	NM_000739	human	genbank	57_37b	+1	reviewed	missense	c.562	p.F188I	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
CNTNAP5	129684	genome.wustl.edu	37	2	125262113	125262113	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	125262113	125262113	G	A	SNP	CNTNAP5	NM_130773	human	genbank	57_37b	+1	reviewed	missense	c.1304	p.R435H	0.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	PatternScan_FA58C_1,PatternScan_FIBRIN_AG_C_DOMAIN,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_FA58C,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_2,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMSmart_EGF,HMMPfam_EGF,superfamily_Fibrinogen_a/b/g_C	-	no_errors	
CREBBP	1387	genome.wustl.edu	37	16	3823824	3823825	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3823824	3823825	-	T	INS	CREBBP	NM_004380	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.2391_2390	p.N797fs	0.983:0.987	NULL	superfamily_TAZ_finger,HMMPfam_zf-TAZ,HMMSmart_ZnF_TAZ,HMMPfam_KIX,superfamily_KIX,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1,HMMPfam_DUF902,HMMPfam_DUF906,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,HMMPfam_Creb_binding,superfamily_Nuc_recept_coact	-	no_errors	
CTCF	10664	genome.wustl.edu	37	16	67645308	67645308	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	67645308	67645308	G	A	SNP	CTCF	NM_006565	human	genbank	57_37b	+1	reviewed	nonsense	c.573	p.W191*	1.000	NULL	HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors	
CTSF	8722	genome.wustl.edu	37	11	66335548	66335548	+	Silent	SNP	A	A	G	rs1127894	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66335548	66335548	A	G	SNP	CTSF	NM_003793	human	genbank	57_37b	-1	reviewed	silent	c.219	p.G73	0.030	NULL	PatternScan_THIOL_PROTEASE_ASN,HMMPfam_Inhibitor_I29,superfamily_SSF54001,HMMPfam_Peptidase_C1,HMMSmart_Pept_C1,PatternScan_THIOL_PROTEASE_CYS,PatternScan_THIOL_PROTEASE_HIS	-		
CTTNBP2NL	55917	genome.wustl.edu	37	1	112999478	112999478	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	112999478	112999478	T	A	SNP	CTTNBP2NL	NM_018704	human	genbank	57_37b	+1	validated	missense	c.1364	p.I455N	1.000	HMMPfam_CortBP2	HMMPfam_CortBP2	-	no_errors	
CUL5	8065	genome.wustl.edu	37	11	107968417	107968417	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	107968417	107968417	G	A	SNP	CUL5	NM_003478	human	genbank	57_37b	+1	validated	missense	c.1960	p.V654I	1.000	HMMPfam_Cullin,superfamily_Cullin homology domain	"superfamily_Cullin repeat,HMMPfam_Cullin,superfamily_Cullin homology domain,HMMSmart_SM00182,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Cullin_Nedd8,PatternScan_CULLIN_1"	-	no_errors	
CYFIP1	23191	genome.wustl.edu	37	15	22960793	22960793	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	22960793	22960793	G	C	SNP	CYFIP1	NM_014608	human	genbank	57_37b	+1	validated	missense	c.1986	p.E662D	1.000	HMMPfam_FragX_IP	HMMPfam_FragX_IP	-	no_errors	
DDX20	11218	genome.wustl.edu	37	1	112298582	112298582	+	Silent	SNP	A	A	G	rs197392	byCluster;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	112298582	112298582	A	G	SNP	DDX20	NM_007204	human	genbank	57_37b	+1	reviewed	silent	c.36	p.A12	0.000	NULL	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C	-		
DGKI	9162	genome.wustl.edu	37	7	137266623	137266623	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	137266623	137266623	C	A	SNP	DGKI	NM_004717	human	genbank	57_37b	-1	reviewed	missense	c.1615	p.V539F	1.000	HMMPfam_DAGK_acc,HMMSmart_DAGKa	PatternScan_ZF_DAG_PE_1,HMMSmart_C1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_DAGKc,HMMPfam_DAGK_acc,HMMSmart_DAGKa,superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	-	no_errors	
DHX40	79665	genome.wustl.edu	37	17	57654510	57654510	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	57654510	57654510	G	A	SNP	DHX40	ENST00000451169	human	ensembl	57_37b	+1	known	missense	c.811	p.V271M	0.140	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00490,HMMPfam_Helicase_C	superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors	
DNAH6	0	genome.wustl.edu	37	2	84785059	84785059	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	84785059	84785059	G	T	SNP	DNAH6	NM_001370	human	genbank	57_37b	+1	validated	missense	c.1803	p.K601N	1.000	NULL	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DNMBP	23268	genome.wustl.edu	37	10	101648689	101648689	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	101648689	101648689	C	T	SNP	DNMBP	NM_015221	human	genbank	57_37b	-1	validated	missense	c.3178	p.V1060M	1.000	HMMSmart_SM00721,HMMPfam_BAR	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,HMMSmart_SM00721,HMMPfam_BAR	-	no_errors	
DOCK11	139818	genome.wustl.edu	37	X	117814519	117814519	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	117814519	117814519	A	G	SNP	DOCK11	NM_144658	human	genbank	57_37b	+1	validated	silent	c.5535	p.K1845	1.000	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_Ded_cyto	-	no_errors	
DPH2	1802	genome.wustl.edu	37	1	44436295	44436295	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	44436295	44436295	T	C	SNP	DPH2	NM_001384	human	genbank	57_37b	+1	reviewed	silent	c.175	p.L59	0.091	HMMPfam_Diphthamide_syn	HMMPfam_Diphthamide_syn	-	no_errors	
DST	667	genome.wustl.edu	37	6	56357785	56357785	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	56357785	56357785	A	T	SNP	DST	NM_001144769	human	genbank	57_37b	-1	reviewed	missense	c.14140	p.S4714T	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_GAS2,HMMSmart_SM00243	-	no_errors	
ENSG00000233836	0	genome.wustl.edu	37	19	24014850	24014850	+	Missense_Mutation	SNP	C	C	T	rs1987967	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	24014850	24014850	C	T	SNP	ENSG00000233836	ENST00000432090	human	ensembl	57_37b	+1	known	missense	c.133	p.P45S	0.998	superfamily_SSF57667	superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-		
ENSG00000246992	0	genome.wustl.edu	37	12	111159109	111159109	+	RNA	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	111159109	111159109	A	G	SNP	ENSG00000246992	ENST00000500171	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	
ENSG00000247043	0	genome.wustl.edu	37	10	11297602	11297602	+	RNA	SNP	C	T	T	rs3740196	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	11297602	11297602	C	T	SNP	ENSG00000247043	ENST00000500991	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.000	-	-	-		
ENSG00000247527	0	genome.wustl.edu	37	17	28575451	28575452	+	RNA	DEL	CA	CA	-	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	28575451	28575452	CA	-	DEL	ENSG00000247527	ENST00000500776	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000:0.006	-	-	(deletion:rna[28575223,28577301])	no_errors	
ENSG00000247866	0	genome.wustl.edu	37	1	180150902	180150902	+	RNA	SNP	A	A	G	rs3820307	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	180150902	180150902	A	G	SNP	ENSG00000247866	ENST00000500066	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.065	-	-	-		
ENSG00000247987	0	genome.wustl.edu	37	6	20142048	20142048	+	RNA	SNP	G	G	C	rs13212096	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	20142048	20142048	G	C	SNP	ENSG00000247987	ENST00000499357	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-		
ERBB4	2066	genome.wustl.edu	37	2	212248654	212248654	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	212248654	212248654	C	T	SNP	ERBB4	NM_005235	human	genbank	57_37b	-1	reviewed	missense	c.3613	p.E1205K	1.000	NULL	superfamily_L domain-like,HMMPfam_Recep_L_domain,HMMSmart_SM00261,HMMPfam_Furin-like,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_YLP	-	no_errors	
ERLEC1	27248	genome.wustl.edu	37	2	54035587	54035587	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	54035587	54035587	G	T	SNP	ERLEC1	NM_015701	human	genbank	57_37b	+1	validated	missense	c.1031	p.C344F	1.000	superfamily_Mannose 6-phosphate receptor domain,HMMPfam_PRKCSH	HMMPfam_PRKCSH,superfamily_Mannose 6-phosphate receptor domain	-	no_errors	
EXOC1	55763	genome.wustl.edu	37	4	56744164	56744164	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	56744164	56744164	C	T	SNP	EXOC1	NM_001024924	human	genbank	57_37b	+1	reviewed	missense	c.1156	p.L386F	1.000	HMMPfam_Sec3	HMMPfam_Sec3	-	no_errors	
FADS2	9415	genome.wustl.edu	37	11	61608167	61608167	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61608167	61608167	T	A	SNP	FADS2	NM_004265	human	genbank	57_37b	+1	reviewed	silent	c.588	p.L196	0.000	HMMPfam_FA_desaturase	superfamily_Cytochrome b5-like heme/steroid binding domain,HMMPfam_Cyt-b5,HMMPfam_FA_desaturase	-	no_errors	
FAM129C	199786	genome.wustl.edu	37	19	17650053	17650053	+	Silent	SNP	G	G	A	rs74546231	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17650053	17650053	G	A	SNP	FAM129C	NM_173544	human	genbank	57_37b	+1	validated	silent	c.783	p.V261	0.697	NULL	superfamily_PH domain-like,HMMSmart_SM00233	-		
FLG	2312	genome.wustl.edu	37	1	152280687	152280687	+	Silent	SNP	C	C	A	rs117449510	by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152280687	152280687	C	A	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	silent	c.6675	p.V2225	0.000	HMMPfam_Filaggrin	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-		
FMN2	56776	genome.wustl.edu	37	1	240497202	240497202	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	240497202	240497202	C	A	SNP	FMN2	NM_020066	human	genbank	57_37b	+1	validated	missense	c.4600	p.L1534I	1.000	HMMSmart_FH2,superfamily_FH2_actin_bd,HMMPfam_FH2	HMMSmart_FH2,HMMPfam_Drf_FH1,superfamily_FH2_actin_bd,HMMPfam_FH2	-	no_errors	
FZD7	8324	genome.wustl.edu	37	2	202899638	202899638	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	202899638	202899638	G	C	SNP	FZD7	NM_003507	human	genbank	57_37b	+1	reviewed	missense	c.268	p.V90L	1.000	HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063	HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063,HMMPfam_Frizzled	-	no_errors	
GATM	2628	genome.wustl.edu	37	15	45658366	45658366	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	45658366	45658366	C	A	SNP	GATM	NM_001482	human	genbank	57_37b	-1	reviewed	missense	c.856	p.A286S	0.999	superfamily_Pentein,HMMPfam_Amidinotransf	PatternScan_TONB_DEPENDENT_REC_1,superfamily_Pentein,HMMPfam_Amidinotransf	-	no_errors	
GNAQ	2776	genome.wustl.edu	37	9	80412549	80412549	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	80412549	80412549	C	A	SNP	GNAQ	NM_002072	human	genbank	57_37b	-1	provisional	missense	c.492	p.L164F	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_Transducin (alpha subunit) insertion domain	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_Transducin (alpha subunit) insertion domain	-	no_errors	
GON4L	54856	genome.wustl.edu	37	1	155753882	155753882	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155753882	155753882	T	G	SNP	GON4L	NM_001037533	human	genbank	57_37b	-1	validated	splice_site	c.1789-2	e13-2	0.986	-	-	-	no_errors	
GRIN3B	116444	genome.wustl.edu	37	19	1008683	1008683	+	Missense_Mutation	SNP	G	G	A	rs2285906	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1008683	1008683	G	A	SNP	GRIN3B	NM_138690	human	genbank	57_37b	+1	provisional	missense	c.2533	p.A845T	0.947	HMMPfam_Lig_chan	superfamily_SSF53822,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-		
HAO2	51179	genome.wustl.edu	37	1	119927617	119927617	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	119927617	119927617	G	A	SNP	HAO2	NM_001005783	human	genbank	57_37b	+1	reviewed	missense	c.502	p.D168N	0.159	superfamily_FMN-linked oxidoreductases,HMMPfam_FMN_dh	superfamily_FMN-linked oxidoreductases,HMMPfam_FMN_dh,PatternScan_FMN_HYDROXY_ACID_DH_1	-	no_errors	
HIVEP2	3097	genome.wustl.edu	37	6	143091275	143091275	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	143091275	143091275	C	A	SNP	HIVEP2	NM_006734	human	genbank	57_37b	-1	provisional	missense	c.4601	p.R1534M	0.786	NULL	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors	
HYDIN	54768	genome.wustl.edu	37	16	71098655	71098655	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	71098655	71098655	G	C	SNP	HYDIN	NM_032821	human	genbank	57_37b	-1	validated	missense	c.2164	p.L722V	0.993	NULL	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
IGDCC3	9543	genome.wustl.edu	37	15	65667575	65667575	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	65667575	65667575	A	C	SNP	IGDCC3	NM_004884	human	genbank	57_37b	-1	validated	missense	c.269	p.L90W	0.913	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
IL6R	3570	genome.wustl.edu	37	1	154437823	154437823	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154437823	154437823	C	G	SNP	IL6R	NM_000565	human	genbank	57_37b	+1	reviewed	missense	c.1374	p.D458E	0.245	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMPfam_IL6Ra-bind,PatternScan_HEMATOPO_REC_L_F3,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
INSRR	3645	genome.wustl.edu	37	1	156814280	156814283	+	Frame_Shift_Del	DEL	CTGT	CTGT	-	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	CTGT	CTGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156814280	156814283	CTGT	-	DEL	INSRR	NM_014215	human	genbank	57_37b	-1	validated	frame_shift_del	c.2711_2708	p.D903fs	0.005:0.003:0.002:0.830	superfamily_FN_III-like	superfamily_SSF52058,HMMPfam_Recep_L_domain,HMMPfam_Furin-like,superfamily_Grow_fac_recept,HMMSmart_FU,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_fn3,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	(deletion:cds_exon[156814254,156814416])	no_errors	
IQSEC2	23096	genome.wustl.edu	37	X	53268410	53268410	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	53268410	53268410	C	G	SNP	IQSEC2	NM_001111125	human	genbank	57_37b	-1	validated	missense	c.3082	p.V1028L	1.000	superfamily_SSF50729,HMMSmart_PH	superfamily_Sec7,HMMPfam_Sec7,HMMSmart_Sec7,superfamily_SSF50729,HMMSmart_PH	-	no_errors	
ITGAD	3681	genome.wustl.edu	37	16	31422067	31422067	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31422067	31422067	C	A	SNP	ITGAD	NM_005353	human	genbank	57_37b	+1	validated	silent	c.1224	p.T408	0.000	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors	
KCNT1	57582	genome.wustl.edu	37	9	138660471	138660471	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	138660471	138660471	G	T	SNP	KCNT1	NM_020822	human	genbank	57_37b	+1	validated	missense	c.1353	p.E451D	1.000	superfamily_NAD(P)-bd	superfamily_SSF81324,HMMPfam_Ion_trans_2,superfamily_NAD(P)-bd,HMMPfam_BK_channel_a	-	no_errors	
KIAA1804	84451	genome.wustl.edu	37	1	233515008	233515008	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	233515008	233515008	G	A	SNP	KIAA1804	NM_032435	human	genbank	57_37b	+1	validated	silent	c.2256	p.L752	0.632	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
KIR2DL3	3804	genome.wustl.edu	37	19	55250982	55250982	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55250982	55250982	C	T	SNP	KIR2DL3	NM_015868	human	genbank	57_37b	+1	reviewed	missense	c.64	p.H22Y	0.041	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig	-	no_errors	
KLK8	11202	genome.wustl.edu	37	19	51503734	51503734	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51503734	51503734	C	A	SNP	KLK8	NM_144505	human	genbank	57_37b	-1	reviewed	missense	c.311	p.G104V	1.000	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
KREMEN1	83999	genome.wustl.edu	37	22	29521252	29521252	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	29521252	29521252	T	G	SNP	KREMEN1	NM_032045	human	genbank	57_37b	+1	reviewed	missense	c.479	p.F160C	1.000	HMMPfam_WSC	superfamily_Kringle-like,HMMSmart_KR,HMMPfam_Kringle,PatternScan_KRINGLE_1,HMMPfam_WSC,superfamily_CUB,HMMPfam_CUB,HMMSmart_CUB	-	no_errors	
LEPREL2	10536	genome.wustl.edu	37	12	6946247	6946247	+	Missense_Mutation	SNP	G	G	T	rs1129646	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6946247	6946247	G	T	SNP	LEPREL2	NM_014262	human	genbank	57_37b	+1	validated	missense	c.1556	p.R519L	0.006	NULL	NULL	-		
LILRA6	79168	genome.wustl.edu	37	19	54746380	54746380	+	Missense_Mutation	SNP	C	C	T	rs1132588	byCluster;byFrequency	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54746380	54746380	C	T	SNP	LILRA6	NM_024318	human	genbank	57_37b	-1	validated	missense	c.61	p.V21M	0.000	NULL	superfamily_SSF48726,HMMPfam_ig,HMMSmart_IG	-		
LOC100288244	0	genome.wustl.edu	37	17	1637458	1637458	+	Missense_Mutation	SNP	G	A	A	rs8065251	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	1637458	1637458	G	A	SNP	LOC100288244	XM_002343496	human	genbank	57_37b	-1	model	missense	c.148	p.R50W	0.001	NULL	NULL	-		
LOC100290868	0	genome.wustl.edu	37	9	35679591	35679591	+	RNA	SNP	C	T	T	rs1890595	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35679591	35679591	C	T	SNP	LOC100290868	XR_079245	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.030	-	-	-		
LOC399881	399881	genome.wustl.edu	37	11	43284075	43284075	+	RNA	SNP	G	G	A	rs16937425	byCluster;byFrequency;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	43284075	43284075	G	A	SNP	LOC399881	XR_040375	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.991	-	-	-		
LOC442421	442421	genome.wustl.edu	37	9	66499694	66499694	+	RNA	SNP	A	A	G	rs111388370	byCluster	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	66499694	66499694	A	G	SNP	LOC442421	NR_024496	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.941	-	-	-		
LOC644165	644165	genome.wustl.edu	37	22	25044198	25044198	+	RNA	SNP	T	T	C	rs61732091	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	25044198	25044198	T	C	SNP	LOC644165	NR_024494	human	genbank	57_37b	+1	validated	rna	NULL	NULL	1.000	-	-	-		
LOC728211	728211	genome.wustl.edu	37	18	12076365	12076365	+	RNA	SNP	C	C	A	rs12458258	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	12076365	12076365	C	A	SNP	LOC728211	XR_015403	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.837	-	-	-		
LRP5L	91355	genome.wustl.edu	37	22	25747801	25747801	+	Missense_Mutation	SNP	C	C	T	rs115513025	by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	25747801	25747801	C	T	SNP	LRP5L	NM_001135772	human	genbank	57_37b	-1	validated	missense	c.724	p.G242S	0.994	NULL	superfamily_YWTD domain,HMMPfam_Ldl_recept_b,HMMSmart_SM00135	-		
LRP8	7804	genome.wustl.edu	37	1	53727829	53727829	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	53727829	53727829	A	G	SNP	LRP8	NM_004631	human	genbank	57_37b	-1	reviewed	missense	c.1825	p.S609P	0.995	superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00181,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b	-	no_errors	
LRRFIP1	9208	genome.wustl.edu	37	2	238671248	238671248	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	238671248	238671248	A	G	SNP	LRRFIP1	NM_001137552	human	genbank	57_37b	+1	validated	missense	c.892	p.R298G	1.000	HMMPfam_DUF2051	HMMPfam_DUF2051	-	no_errors	
MIAT	440823	genome.wustl.edu	37	22	27070253	27070253	+	RNA	SNP	T	T	C	rs737766	byCluster;by2Hit2Allele;byHapMap	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	27070253	27070253	T	C	SNP	MIAT	NR_003491	human	genbank	57_37b	+1	reviewed	rna	NULL	NULL	0.000	-	-	-		
MRPL12	6182	genome.wustl.edu	37	17	79674249	79674249	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79674249	79674249	C	T	SNP	MRPL12	NM_002949	human	genbank	57_37b	+1	reviewed	silent	c.576	p.G192	0.038	HMMPfam_Ribosomal_L12,superfamily_Ribosomal_L7/12_C/ClpS-like	superfamily_Ribosomal_L12/7,HMMPfam_Ribosomal_L12,superfamily_Ribosomal_L7/12_C/ClpS-like	-	no_errors	
MUC2	4583	genome.wustl.edu	37	11	1093286	1093286	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1093286	1093286	C	G	SNP	MUC2	NM_002457	human	genbank	57_37b	+1	reviewed	missense	c.5105	p.T1702S	0.000	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMSmart_SM00214,PatternScan_VWFC_1,PatternScan_EGF_1,HMMPfam_VWC,HMMPfam_Cys_knot,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors	
MUC5B	727897	genome.wustl.edu	37	11	1255773	1255773	+	Silent	SNP	C	C	T	rs7116614	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1255773	1255773	C	T	SNP	MUC5B	NM_002458	human	genbank	57_37b	+1	validated	silent	c.2502	p.C834	0.507	superfamily_Serine proterase inhibitors	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_SM00041,HMMPfam_Cys_knot,PatternScan_CTCK_1	-		
MYO18B	84700	genome.wustl.edu	37	22	26422671	26422671	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	26422671	26422671	C	G	SNP	MYO18B	NM_032608	human	genbank	57_37b	+1	reviewed	missense	c.6731	p.P2244R	0.998	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMPfam_IQ	-	no_errors	
NAALADL1	10004	genome.wustl.edu	37	11	64825817	64825817	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64825817	64825817	C	T	SNP	NAALADL1	NM_005468	human	genbank	57_37b	-1	validated	silent	c.177	p.E59	1.000	NULL	PatternScan_PROTEIN_KINASE_ATP,superfamily_Transferrin receptor ectodomain apical domain,HMMPfam_PA,superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M28,superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_TFR_dimer	-	no_errors	
NFIA	4774	genome.wustl.edu	37	1	61869882	61869882	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	61869882	61869882	G	A	SNP	NFIA	NM_001145512	human	genbank	57_37b	+1	reviewed	silent	c.1317	p.E439	1.000	HMMPfam_CTF_NFI	HMMPfam_NfI_DNAbd_pre-N,PatternScan_CTF_NFI_1,HMMPfam_MH1,HMMSmart_SM00523,HMMPfam_CTF_NFI	-	no_errors	
NKD1	85407	genome.wustl.edu	37	16	50664794	50664794	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	50664794	50664794	G	T	SNP	NKD1	NM_033119	human	genbank	57_37b	+1	provisional	missense	c.668	p.W223L	0.999	NULL	PatternScan_EF_HAND_1,PatternScan_GLYOXALASE_I_2	-	no_errors	
NPTXR	23467	genome.wustl.edu	37	22	39218758	39218758	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	39218758	39218758	C	G	SNP	NPTXR	NM_014293	human	genbank	57_37b	-1	reviewed	silent	c.1359	p.L453	1.000	HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Pentaxin	HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Pentaxin	-	no_errors	
NR2E1	7101	genome.wustl.edu	37	6	108502082	108502082	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	108502082	108502082	G	C	SNP	NR2E1	NM_003269	human	genbank	57_37b	+1	validated	missense	c.811	p.V271L	1.000	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
NUMA1	4926	genome.wustl.edu	37	11	71726884	71726884	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	71726884	71726884	C	G	SNP	NUMA1	NM_006185	human	genbank	57_37b	-1	validated	missense	c.1665	p.Q555H	0.998	NULL	superfamily_Prefoldin	-	no_errors	
OGDHL	55753	genome.wustl.edu	37	10	50946058	50946058	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	50946058	50946058	A	T	SNP	OGDHL	NM_018245	human	genbank	57_37b	-1	validated	missense	c.2452	p.C818S	1.000	superfamily_SSF52518,HMMPfam_Transket_pyr	superfamily_SSF52518,HMMPfam_E1_dh,HMMPfam_Transket_pyr	-	no_errors	
OR4K2	390431	genome.wustl.edu	37	14	20344945	20344945	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20344945	20344945	G	T	SNP	OR4K2	NM_001005501	human	genbank	57_37b	+1	provisional	missense	c.519	p.E173D	0.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PCCB	5096	genome.wustl.edu	37	3	136045650	136045650	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	136045650	136045650	T	G	SNP	PCCB	NM_000532	human	genbank	57_37b	+1	reviewed	missense	c.1096	p.L366V	1.000	superfamily_SSF52096,HMMPfam_Carboxyl_trans	superfamily_SSF52096,HMMPfam_Carboxyl_trans	-	no_errors	
PDE4DIP	9659	genome.wustl.edu	37	1	144921921	144921921	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	144921921	144921921	C	T	SNP	PDE4DIP	NM_014644	human	genbank	57_37b	-1	validated	missense	c.1108	p.A370T	0.977	NULL	HMMPfam_Microtub_assoc	-	no_errors	
PKHD1	5314	genome.wustl.edu	37	6	51890477	51890477	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	51890477	51890477	A	G	SNP	PKHD1	NM_138694	human	genbank	57_37b	-1	reviewed	silent	c.4131	p.N1377	0.013	NULL	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMSmart_SM00710,HMMPfam_G8,superfamily_Pectin lyase-like	-	no_errors	
POFUT1	23509	genome.wustl.edu	37	20	30795819	30795819	+	Silent	SNP	T	T	C	rs1923095	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30795819	30795819	T	C	SNP	POFUT1	NM_015352	human	genbank	57_37b	+1	reviewed	silent	c.75	p.P25	0.000	NULL	HMMPfam_O-FucT	-		
POU2F2	5452	genome.wustl.edu	37	19	42626508	42626508	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42626508	42626508	G	C	SNP	POU2F2	NM_002698	human	genbank	57_37b	-1	validated	missense	c.117	p.D39E	0.998	NULL	HMMPfam_Pou,HMMSmart_POU,superfamily_Lambda_like_DNA,PatternScan_POU_1,PatternScan_POU_2,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
PRDM1	639	genome.wustl.edu	37	6	106553082	106553082	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	106553082	106553082	C	G	SNP	PRDM1	NM_001198	human	genbank	57_37b	+1	reviewed	missense	c.1047	p.S349R	1.000	NULL	HMMPfam_SET,HMMSmart_SET,superfamily_SSF82199,PatternScan_AA_TRNA_LIGASE_I,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
PREPL	9581	genome.wustl.edu	37	2	44548558	44548568	+	Frame_Shift_Del	DEL	GTACAGGAATT	GTACAGGAATT	-	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	GTACAGGAATT	GTACAGGAATT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	44548558	44548568	GTACAGGAATT	-	DEL	PREPL	NM_006036	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.2121_2111	p.K704fs	0.832:0.972:0.986:0.981:0.998:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_alpha/beta-Hydrolases	HMMPfam_Peptidase_S9_N,superfamily_Prolyl oligopeptidase N-terminal domain,superfamily_alpha/beta-Hydrolases,HMMPfam_Peptidase_S9	(deletion:cds_exon[44548495,44548584])	no_errors	
PRKG2	5593	genome.wustl.edu	37	4	82125781	82125781	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	82125781	82125781	C	G	SNP	PRKG2	NM_006259	human	genbank	57_37b	-1	provisional	missense	c.421	p.E141Q	0.952	NULL	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X	-	no_errors	
PROC	5624	genome.wustl.edu	37	2	128186352	128186352	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	128186352	128186352	A	G	SNP	PROC	NM_000312	human	genbank	57_37b	+1	reviewed	missense	c.1216	p.M406V	1.000	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_SER	HMMSmart_GLA,superfamily_VitK_dep_GLA,HMMPfam_Gla,PatternScan_GLA_1,PatternScan_EGF_CA,HMMSmart_EGF_CA,superfamily_SSF57196,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_EGF,superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
PROL1	58503	genome.wustl.edu	37	4	71275628	71275628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71275628	71275628	G	A	SNP	PROL1	NM_021225	human	genbank	57_37b	+1	reviewed	missense	c.583	p.A195T	0.009	NULL	NULL	-	no_errors	
PUM1	9698	genome.wustl.edu	37	1	31439034	31439034	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	31439034	31439034	C	T	SNP	PUM1	NM_001020658	human	genbank	57_37b	-1	reviewed	silent	c.1881	p.Q627	1.000	NULL	superfamily_ARM repeat,HMMPfam_PUF,HMMSmart_SM00025	-	no_errors	
QRICH2	84074	genome.wustl.edu	37	17	74288109	74288109	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74288109	74288109	C	G	SNP	QRICH2	NM_032134	human	genbank	57_37b	-1	provisional	missense	c.2201	p.G734A	0.000	NULL	NULL	-	no_errors	
RILPL1	353116	genome.wustl.edu	37	12	124017850	124017850	+	Silent	SNP	G	G	C	rs28492040	byCluster;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124017850	124017850	G	C	SNP	RILPL1	NM_178314	human	genbank	57_37b	-1	validated	silent	c.180	p.V60	0.997	HMMPfam_Jnk-SapK_ap_N	HMMPfam_Jnk-SapK_ap_N	-		
RLF	6018	genome.wustl.edu	37	1	40654877	40654877	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	40654877	40654877	G	C	SNP	RLF	NM_012421	human	genbank	57_37b	+1	validated	missense	c.388	p.V130L	1.000	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,superfamily_SSF57667	-	no_errors	
SAFB2	9667	genome.wustl.edu	37	19	5590388	5590388	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5590388	5590388	C	T	SNP	SAFB2	NM_014649	human	genbank	57_37b	-1	validated	missense	c.2426	p.G809E	0.917	superfamily_SSF54928	superfamily_SSF68906,HMMPfam_SAP,HMMSmart_SAP,superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors	
SCN7A	6332	genome.wustl.edu	37	2	167262191	167262191	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	167262191	167262191	C	A	SNP	SCN7A	NM_002976	human	genbank	57_37b	-1	validated	missense	c.4948	p.D1650Y	0.018	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc	-	no_errors	
SEMA4A	64218	genome.wustl.edu	37	1	156124481	156124481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156124481	156124481	C	T	SNP	SEMA4A	NM_022367	human	genbank	57_37b	+1	provisional	missense	c.112	p.P38S	0.586	superfamily_Sema	superfamily_Sema,HMMPfam_Sema,HMMSmart_Sema,HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold	-	no_errors	
SFXN5	94097	genome.wustl.edu	37	2	73268023	73268023	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	73268023	73268023	T	G	SNP	SFXN5	NM_144579	human	genbank	57_37b	-1	validated	missense	c.209	p.Y70S	1.000	HMMPfam_Mtc	HMMPfam_Mtc	-	no_errors	
SIGLEC1	6614	genome.wustl.edu	37	20	3686511	3686511	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	3686511	3686511	C	T	SNP	SIGLEC1	NM_023068	human	genbank	57_37b	-1	reviewed	missense	c.586	p.V196I	0.000	superfamily_Immunoglobulin,HMMPfam_C2-set_2,HMMSmart_SM00409	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_C2-set_2,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set	-	no_errors	
SLC17A8	246213	genome.wustl.edu	37	12	100795569	100795569	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	100795569	100795569	G	A	SNP	SLC17A8	NM_139319	human	genbank	57_37b	+1	validated	missense	c.691	p.A231T	1.000	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	-	no_errors	
SLC25A14	9016	genome.wustl.edu	37	X	129483303	129483303	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	129483303	129483303	C	T	SNP	SLC25A14	NM_003951	human	genbank	57_37b	+1	reviewed	silent	c.396	p.F132	1.000	HMMPfam_Mito_carr,superfamily_Mitochondrial carrier	HMMPfam_Mito_carr,superfamily_Mitochondrial carrier	-	no_errors	
SLC44A2	57153	genome.wustl.edu	37	19	10742750	10742750	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10742750	10742750	C	T	SNP	SLC44A2	NM_020428	human	genbank	57_37b	+1	validated	silent	c.741	p.L247	1.000	NULL	HMMPfam_DUF580	-	no_errors	
SMOC2	64094	genome.wustl.edu	37	6	168910709	168910709	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	168910709	168910709	C	A	SNP	SMOC2	NM_022138	human	genbank	57_37b	+1	reviewed	missense	c.199	p.Q67K	1.000	superfamily_Thyroglobulin_1,HMMSmart_KAZAL,HMMPfam_Kazal_1	superfamily_Thyroglobulin_1,HMMSmart_KAZAL,HMMPfam_Kazal_1,HMMPfam_Thyroglobulin_1,PatternScan_THYROGLOBULIN_1_1,HMMSmart_TY,superfamily_SSF47473,HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_SPARC_Ca_bdg	-	no_errors	
SSPO	23145	genome.wustl.edu	37	7	149516486	149516486	+	Silent	SNP	A	A	G	rs6464034	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149516486	149516486	A	G	SNP	SSPO	ENST00000378016	human	ensembl	57_37b	+1	known	silent	c.11889	p.G3963	0.921	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_VWC,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_BPTI_KUNITZ_1,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_EGF_1,PatternScan_VWFC_1	-		
STAB2	55576	genome.wustl.edu	37	12	104097010	104097010	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	104097010	104097010	A	T	SNP	STAB2	NM_017564	human	genbank	57_37b	+1	reviewed	missense	c.3799	p.I1267F	1.000	superfamily_BIgH3_FAS1,HMMPfam_Fasciclin,HMMSmart_FAS1	HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_alliinase,superfamily_SSF57196,HMMPfam_EGF,superfamily_BIgH3_FAS1,HMMPfam_Fasciclin,HMMSmart_FAS1,HMMPfam_Laminin_EGF,PatternScan_EGF_LAM_1,superfamily_Grow_fac_recept,HMMPfam_EGF_2,HMMSmart_LINK,HMMPfam_Xlink,superfamily_C-type_lectin_fold,PatternScan_LINK_1	-	no_errors	
SYNE1	23345	genome.wustl.edu	37	6	152826437	152826437	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	152826437	152826437	T	G	SNP	SYNE1	NM_182961	human	genbank	57_37b	-1	reviewed	missense	c.677	p.D226A	1.000	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,HMMPfam_KASH	-	no_errors	
TBRG1	84897	genome.wustl.edu	37	11	124494848	124494848	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	124494848	124494848	G	T	SNP	TBRG1	NM_032811	human	genbank	57_37b	+1	validated	nonsense	c.172	p.E58*	1.000	NULL	HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542	-	no_errors	
TEX13A	56157	genome.wustl.edu	37	X	104464663	104464663	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	104464663	104464663	T	G	SNP	TEX13A	ENST00000413579	human	ensembl	57_37b	-1	known	missense	c.419	p.Q140P	0.001	NULL	superfamily_SSF90209,HMMPfam_zf-RanBP,HMMSmart_ZnF_RBZ,PatternScan_ZF_RANBP2_1	-	no_errors	
TFAP4	7023	genome.wustl.edu	37	16	4312598	4312598	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4312598	4312598	T	C	SNP	TFAP4	NM_003223	human	genbank	57_37b	-1	validated	missense	c.194	p.N65S	1.000	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	-	no_errors	
TICAM1	148022	genome.wustl.edu	37	19	4817288	4817289	+	In_Frame_Ins	INS	-	-	AGG	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4817288	4817289	-	AGG	INS	TICAM1	NM_182919	human	genbank	57_37b	-1	validated	in_frame_ins	c.1102_1101	p.367in_frame_insP	0.000:0.000	NULL	NULL	-	no_errors	
TIMM44	10469	genome.wustl.edu	37	19	7998974	7998974	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7998974	7998974	C	A	SNP	TIMM44	NM_006351	human	genbank	57_37b	-1	validated	missense	c.543	p.Q181H	1.000	NULL	HMMPfam_Tim44	-	no_errors	
TJP3	27134	genome.wustl.edu	37	19	3740658	3740658	+	Silent	SNP	T	G	G	rs10416362	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	3740658	3740658	T	G	SNP	TJP3	NM_014428	human	genbank	57_37b	+1	provisional	silent	c.1839	p.L613	0.251	HMMSmart_SM00072	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	-		
TLE4	7091	genome.wustl.edu	37	9	82323054	82323054	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	82323054	82323054	G	T	SNP	TLE4	NM_007005	human	genbank	57_37b	+1	validated	missense	c.958	p.V320F	1.000	NULL	HMMPfam_TLE_N,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
TMEM57	55219	genome.wustl.edu	37	1	25810708	25810708	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	25810708	25810708	G	T	SNP	TMEM57	NM_018202	human	genbank	57_37b	+1	validated	missense	c.1256	p.R419L	1.000	HMMPfam_Macoilin,superfamily_Prefoldin	HMMPfam_Macoilin,superfamily_Prefoldin	-	no_errors	
TNFRSF10D	8793	genome.wustl.edu	37	8	23004508	23004512	+	Frame_Shift_Del	DEL	TTTTA	TTTTA	-	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	TTTTA	TTTTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	23004508	23004512	TTTTA	-	DEL	TNFRSF10D	NM_003840	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.448_444	p.D148fs	0.000:0.000:0.000:0.000:0.000	superfamily_TNF receptor-like,PatternScan_TNFR_NGFR_1,HMMPfam_TNFR_c6,HMMSmart_SM00208	superfamily_TNF receptor-like,HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1	(deletion:cds_exon[23004474,23004585])	no_errors	
TRMT12	55039	genome.wustl.edu	37	8	125464331	125464331	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	125464331	125464331	C	G	SNP	TRMT12	NM_017956	human	genbank	57_37b	+1	validated	missense	c.1163	p.T388S	0.009	NULL	superfamily_SSF53335,HMMPfam_Met_10	-	no_errors	
TRMT2B	79979	genome.wustl.edu	37	X	100274386	100274386	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	100274386	100274386	G	T	SNP	TRMT2B	NM_024917	human	genbank	57_37b	-1	reviewed	missense	c.1175	p.T392N	0.998	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_MTS	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_MTS	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179606022	179606022	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179606022	179606022	T	C	SNP	TTN	ENST00000342175	human	ensembl	57_37b	-1	known	missense	c.11425	p.T3809A	0.915	superfamily_Concanavalin A-like lectins/glucanases,superfamily_DBL homology domain (DH-domain),superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Concanavalin A-like lectins/glucanases,superfamily_DBL homology domain (DH-domain),superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
UPF3B	65109	genome.wustl.edu	37	X	118971940	118971940	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	118971940	118971940	C	T	SNP	UPF3B	NM_080632	human	genbank	57_37b	-1	reviewed	missense	c.1082	p.R361Q	0.355	NULL	HMMPfam_Smg4_UPF3,superfamily_RNA-binding domain RBD	-	no_errors	
VCAN	1462	genome.wustl.edu	37	5	82815833	82815833	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	82815833	82815833	A	T	SNP	VCAN	NM_004385	human	genbank	57_37b	+1	reviewed	missense	c.1708	p.T570S	0.020	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,superfamily_C-type lectin-like,HMMSmart_SM00445,HMMPfam_Xlink,PatternScan_LINK_1,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
VCX3B	425054	genome.wustl.edu	37	X	8433833	8433833	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	8433833	8433833	C	T	SNP	VCX3B	NM_001001888	human	genbank	57_37b	+1	reviewed	silent	c.150	p.R50	0.000	NULL	NULL	-	no_errors	
VPS52	6293	genome.wustl.edu	37	6	33231848	33231848	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	33231848	33231848	A	G	SNP	VPS52	NM_022553	human	genbank	57_37b	-1	reviewed	silent	c.1557	p.A519	0.995	HMMPfam_Vps52	HMMPfam_Vps52	-	no_errors	
VWA3A	146177	genome.wustl.edu	37	16	22134947	22134947	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	22134947	22134947	G	C	SNP	VWA3A	NM_173615	human	genbank	57_37b	+1	validated	missense	c.1451	p.R484T	0.031	NULL	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	-	no_errors	
WDR87	83889	genome.wustl.edu	37	19	38377392	38377409	+	In_Frame_Del	DEL	CCTCCTCCTCCTCCCTTA	CCTCCTCCTCCTCCCTTA	-	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	CCTCCTCCTCCTCCCTTA	CCTCCTCCTCCTCCCTTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38377392	38377409	CCTCCTCCTCCTCCCTTA	-	DEL	WDR87	NM_031951	human	genbank	57_37b	-1	provisional	in_frame_del	c.6802_6785	p.VREEEE2262in_frame_del	0.003:0.004:0.018:0.026:0.130:0.738:0.713:0.701:0.633:0.052:0.004:0.021:0.032:0.000:0.002:0.003:0.000:0.000	superfamily_WD40 repeat-like,superfamily_ARM repeat	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_C_TYPE_LECTIN_1,superfamily_ARM repeat	(deletion:cds_exon[38375572,38380916])	no_errors	
WFS1	7466	genome.wustl.edu	37	4	6293696	6293696	+	Silent	SNP	C	C	G	rs1801213	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	6293696	6293696	C	G	SNP	WFS1	NM_006005	human	genbank	57_37b	+1	reviewed	silent	c.684	p.R228	0.948	NULL	NULL	-		
ZFYVE1	53349	genome.wustl.edu	37	14	73464532	73464539	+	Frame_Shift_Del	DEL	CTGGGTGT	CTGGGTGT	-	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	CTGGGTGT	CTGGGTGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	73464532	73464539	CTGGGTGT	-	DEL	ZFYVE1	NM_021260	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.975_968	p.H323fs	0.995:1.000:1.000:0.964:1.000:1.000:1.000:1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE	(deletion:cds_exon[73464519,73465023])	no_errors	
ZIM3	114026	genome.wustl.edu	37	19	57647274	57647274	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57647274	57647274	T	A	SNP	ZIM3	NM_052882	human	genbank	57_37b	-1	provisional	missense	c.431	p.N144I	0.002	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors	
ZNF418	147686	genome.wustl.edu	37	19	58438056	58438056	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58438056	58438056	C	T	SNP	ZNF418	NM_133460	human	genbank	57_37b	-1	provisional	missense	c.1493	p.R498H	0.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667,HMMPfam_zf-C2H2	-	no_errors	
ZNF597	146434	genome.wustl.edu	37	16	3487525	3487525	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3487525	3487525	C	T	SNP	ZNF597	NM_152457	human	genbank	57_37b	-1	provisional	silent	c.174	p.K58	0.001	superfamily_Krueppel-associated_box,HMMSmart_KRAB	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF613	79898	genome.wustl.edu	37	19	52448266	52448266	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0AT-01A-11D-A045-09	TCGA-AN-A0AT-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52448266	52448266	G	T	SNP	ZNF613	NM_001031721	human	genbank	57_37b	+1	validated	missense	c.1130	p.C377F	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
