Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCA7	10347	genome.wustl.edu	37	19	1049269	1049269	+	Silent	SNP	G	G	A	rs4147914	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1049269	1049269	G	A	SNP	ABCA7	NM_019112	human	genbank	57_37b	+1	reviewed	silent	c.2385	p.L795	0.976	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-		
ACTR2	10097	genome.wustl.edu	37	2	65480893	65480893	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	65480893	65480893	A	G	SNP	ACTR2	NM_001005386	human	genbank	57_37b	+1	reviewed	silent	c.495	p.G165	0.994	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	HMMPfam_Actin,superfamily_Actin-like ATPase domain,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE	-	no_errors	
AIM1	202	genome.wustl.edu	37	6	106968546	106968546	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	106968546	106968546	A	T	SNP	AIM1	NM_001624	human	genbank	57_37b	+1	validated	nonsense	c.2239	p.K747*	0.652	NULL	superfamily_G_crystallin_SF,HMMSmart_XTALbg,HMMPfam_Crystall,superfamily_RicinB_like,HMMSmart_RICIN,HMMPfam_Ricin_B_lectin	-	no_errors	
BAIAP2	10458	genome.wustl.edu	37	17	79059230	79059230	+	Missense_Mutation	SNP	C	C	T	rs8080815	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79059230	79059230	C	T	SNP	BAIAP2	ENST00000435091	human	ensembl	57_37b	+1	known	missense	c.59	p.A20V	0.000	NULL	HMMPfam_IMD,superfamily_SH3,HMMSmart_SH3,HMMPfam_SH3_2	-		
C4orf50	0	genome.wustl.edu	37	4	5982066	5982066	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	5982066	5982066	C	A	SNP	C4orf50	NM_207405	human	genbank	57_37b	-1	predicted	splice_site	c.4-1	e2-1	0.091	-	-	-	no_errors	
CACNA1H	8912	genome.wustl.edu	37	16	1268013	1268013	+	Silent	SNP	G	G	C	rs57135930	byCluster;byFrequency;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1268013	1268013	G	C	SNP	CACNA1H	NM_021098	human	genbank	57_37b	+1	reviewed	silent	c.5418	p.T1806	0.015	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-		
CDH1	999	genome.wustl.edu	37	16	68844104	68844105	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	68844104	68844105	TC	-	DEL	CDH1	NM_004360	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.692_693	p.H233fs	0.001:0.001	HMMPfam_Cadherin,superfamily_Cadherin-like,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	(deletion:cds_exon[68844100,68844244])	no_errors	
DNAH6	0	genome.wustl.edu	37	2	85046494	85046494	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	85046494	85046494	G	A	SNP	DNAH6	NM_001370	human	genbank	57_37b	+1	validated	missense	c.12439	p.A4147T	0.998	HMMPfam_Dynein_heavy	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
ENSG00000245347	0	genome.wustl.edu	37	3	128199662	128199662	+	RNA	SNP	G	A	A	rs10934857	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	128199662	128199662	G	A	SNP	ENSG00000245347	ENST00000501638	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-		
ENSG00000245928	0	genome.wustl.edu	37	4	76927049	76927049	+	RNA	SNP	T	T	C	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	76927049	76927049	T	C	SNP	ENSG00000245928	ENST00000501239	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
FAM160B2	64760	genome.wustl.edu	37	8	21957342	21957342	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	21957342	21957342	G	A	SNP	FAM160B2	NM_022749	human	genbank	57_37b	+1	validated	missense	c.1279	p.G427R	0.007	HMMPfam_RAI16-like	HMMPfam_RAI16-like	-	no_errors	
FCN1	2219	genome.wustl.edu	37	9	137809681	137809681	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	137809681	137809681	C	T	SNP	FCN1	NM_002003	human	genbank	57_37b	-1	reviewed	missense	c.37	p.A13T	0.000	NULL	HMMPfam_Collagen,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like,PatternScan_LIPOCALIN,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors	
FICD	11153	genome.wustl.edu	37	12	108913081	108913081	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	108913081	108913081	G	A	SNP	FICD	NM_007076	human	genbank	57_37b	+1	validated	silent	c.1206	p.V402	0.222	NULL	superfamily_SSF48452,HMMPfam_Fic	-	no_errors	
FOLR3	2352	genome.wustl.edu	37	11	71847146	71847146	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	71847146	71847146	G	A	SNP	FOLR3	ENST00000456237	human	ensembl	57_37b	+1	known	missense	c.148	p.E50K	0.994	HMMPfam_Folate_rec	HMMPfam_Folate_rec	-	no_errors	
JPH3	57338	genome.wustl.edu	37	16	87723838	87723838	+	Silent	SNP	T	C	C	rs34767155	byCluster;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	87723838	87723838	T	C	SNP	JPH3	NM_020655	human	genbank	57_37b	+1	reviewed	silent	c.1872	p.H624	1.000	NULL	superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain,HMMSmart_SM00698,HMMPfam_MORN	-		
LOC100288508	0	genome.wustl.edu	37	21	47538691	47538691	+	Missense_Mutation	SNP	G	G	T	rs9917540	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	47538691	47538691	G	T	SNP	LOC100288508	XM_002343757	human	genbank	57_37b	-1	model	missense	c.1172	p.T391N	0.017	NULL	NULL	-		
MAGEA10	4109	genome.wustl.edu	37	X	151303750	151303750	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	151303750	151303750	C	A	SNP	MAGEA10	NM_001011543	human	genbank	57_37b	-1	reviewed	nonsense	c.343	p.E115*	0.002	NULL	HMMPfam_MAGE	-	no_errors	
MAGIX	79917	genome.wustl.edu	37	X	49021699	49021699	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49021699	49021699	G	-	DEL	MAGIX	NM_024859	human	genbank	57_37b	+1	validated	frame_shift_del	c.679	p.V227fs	0.009	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	(deletion:cds_exon[49021528,49021699])	no_errors	
MLL3	58508	genome.wustl.edu	37	7	151878506	151878506	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	151878506	151878506	G	A	SNP	MLL3	NM_170606	human	genbank	57_37b	-1	reviewed	nonsense	c.6439	p.Q2147*	0.997	NULL	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1,PatternScan_ATPASE_ALPHA_BETA,HMMSmart_SM00398,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MYO9A	4649	genome.wustl.edu	37	15	72252308	72252308	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	72252308	72252308	G	A	SNP	MYO9A	NM_006901	human	genbank	57_37b	-1	validated	nonsense	c.2116	p.R706*	0.960	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242	HMMPfam_RA,HMMSmart_SM00314,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
N4BP2	55728	genome.wustl.edu	37	4	40104198	40104198	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	40104198	40104198	C	A	SNP	N4BP2	NM_018177	human	genbank	57_37b	+1	reviewed	missense	c.733	p.L245I	0.123	NULL	superfamily_UBA-like,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_DUF1771,HMMSmart_SM00463,HMMPfam_Smr	-	no_errors	
NCOR1	9611	genome.wustl.edu	37	17	15973687	15973687	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	15973687	15973687	A	C	SNP	NCOR1	NM_006311	human	genbank	57_37b	-1	reviewed	nonsense	c.4305	p.Y1435*	0.288	NULL	superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors	
NCOR1	9611	genome.wustl.edu	37	17	16055257	16055258	+	Splice_Site	INS	-	-	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	16055257	16055258	-	A	INS	NCOR1	NM_006311	human	genbank	57_37b	-1	reviewed	splice_site_ins	c.842+2_842+1	e7+2	1.000:1.000	-	-	-	no_errors	
NCRNA00181	0	genome.wustl.edu	37	19	58864150	58864150	+	Silent	SNP	T	T	C	rs6510137	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58864150	58864150	T	C	SNP	NCRNA00181	ENST00000415594	human	ensembl	57_37b	+1	known	silent	c.519	p.L173	0.000	NULL	NULL	-		
NPEPL1	79716	genome.wustl.edu	37	20	57282190	57282190	+	Silent	SNP	G	A	A	rs41310841	byCluster;byFrequency;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	57282190	57282190	G	A	SNP	NPEPL1	NM_024663	human	genbank	57_37b	+1	validated	silent	c.834	p.P278	0.003	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M17	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M17,PatternScan_CYTOSOL_AP,PatternScan_RCC1_2	-		
PCDHA2	56146	genome.wustl.edu	37	5	140175827	140175827	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140175827	140175827	C	T	SNP	PCDHA2	NM_018905	human	genbank	57_37b	+1	reviewed	silent	c.1278	p.T426	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMSmart_SM00112,HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PIK3CA	5290	genome.wustl.edu	37	3	178916876	178916876	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178916876	178916876	G	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.263	p.R88Q	1.000	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PRAF2	11230	genome.wustl.edu	37	X	48931491	48931491	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48931491	48931491	G	A	SNP	PRAF2	NM_007213	human	genbank	57_37b	-1	provisional	silent	c.156	p.F52	0.001	HMMPfam_PRA1	HMMPfam_PRA1	-	no_errors	
PTPRB	5787	genome.wustl.edu	37	12	70988244	70988245	+	Splice_Site	INS	-	-	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	70988244	70988245	-	A	INS	PTPRB	NM_001109754	human	genbank	57_37b	-1	reviewed	splice_site_ins	c.1516+2_1516+1	e6+2	1.000:1.000	-	-	-	no_errors	
RETSAT	54884	genome.wustl.edu	37	2	85571790	85571790	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	85571790	85571790	G	A	SNP	RETSAT	NM_017750	human	genbank	57_37b	-1	validated	nonsense	c.1183	p.R395*	0.003	superfamily_FAD/NAD(P)-binding domain	superfamily_FAD/NAD(P)-binding domain,HMMPfam_FAD_binding_2,PatternScan_RCC1_2	-	no_errors	
SCN5A	6331	genome.wustl.edu	37	3	38651294	38651294	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38651294	38651294	C	T	SNP	SCN5A	NM_001099404	human	genbank	57_37b	-1	reviewed	missense	c.865	p.G289S	0.239	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMPfam_IQ	-	no_errors	
SEZ6L2	26470	genome.wustl.edu	37	16	29908433	29908433	+	Missense_Mutation	SNP	C	C	G	rs11649499	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	29908433	29908433	C	G	SNP	SEZ6L2	NM_201575	human	genbank	57_37b	-1	validated	missense	c.221	p.R74P	0.995	NULL	superfamily_Spermadhesin CUB domain,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB	-		
SHF	90525	genome.wustl.edu	37	15	45470457	45470457	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	45470457	45470457	A	G	SNP	SHF	NM_138356	human	genbank	57_37b	-1	validated	silent	c.351	p.T117	0.550	NULL	superfamily_Nucleotidylyl transferase,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors	
SLC23A3	151295	genome.wustl.edu	37	2	220034618	220034618	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	220034618	220034618	T	A	SNP	SLC23A3	NM_001144890	human	genbank	57_37b	-1	validated	missense	c.89	p.N30I	0.000	NULL	HMMPfam_Xan_ur_permease	-	no_errors	
TBC1D19	55296	genome.wustl.edu	37	4	26750062	26750062	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	26750062	26750062	G	A	SNP	TBC1D19	NM_018317	human	genbank	57_37b	+1	validated	missense	c.1349	p.R450Q	0.998	HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	-	no_errors	
TBC1D3B	414059	genome.wustl.edu	37	17	34493524	34493524	+	Missense_Mutation	SNP	G	A	A	rs78834724	byFrequency	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	34493524	34493524	G	A	SNP	TBC1D3B	NM_001001417	human	genbank	57_37b	-1	reviewed	missense	c.1501	p.R501W	0.101	NULL	superfamily_RabGAP_TBC,HMMPfam_TBC,HMMSmart_TBC	-		
TMEM132A	54972	genome.wustl.edu	37	11	60699241	60699241	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	60699241	60699241	C	T	SNP	TMEM132A	NM_017870	human	genbank	57_37b	+1	reviewed	missense	c.1100	p.P367L	0.942	NULL	NULL	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179436055	179436055	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179436055	179436055	T	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.67094	p.D22365V	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
ZNF594	84622	genome.wustl.edu	37	17	5084992	5084995	+	Frame_Shift_Del	DEL	AAAG	AAAG	-	novel	unknown	TCGA-B6-A0IP-01A-11D-A045-09	TCGA-B6-A0IP-10A-01W-A055-09	AAAG	AAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	5084992	5084995	AAAG	-	DEL	ZNF594	ENST00000381752	human	ensembl	57_37b	-1	known	frame_shift_del	c.195_192	p.F65fs	0.743:0.774:0.719:0.033	superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	(deletion:cds_exon[5084191,5085186])	no_errors	
