Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ASPM	259266	genome.wustl.edu	37	1	197059075	197059075	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	197059075	197059075	C	T	SNP	ASPM	NM_018136	human	genbank	57_37b	-1	reviewed	silent	c.9969	p.L3323	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00033,HMMPfam_CH,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors	
BTNL9	153579	genome.wustl.edu	37	5	180486582	180486582	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	180486582	180486582	G	A	SNP	BTNL9	NM_152547	human	genbank	57_37b	+1	validated	missense	c.1328	p.R443H	0.001	HMMPfam_SPRY,HMMSmart_SM00449	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors	
CASC1	55259	genome.wustl.edu	37	12	25307302	25307302	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	25307302	25307302	G	T	SNP	CASC1	NM_018272	human	genbank	57_37b	-1	validated	missense	c.389	p.T130K	0.791	NULL	NULL	-	no_errors	
CBFB	865	genome.wustl.edu	37	16	67100598	67100598	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	67100598	67100598	C	T	SNP	CBFB	NM_022845	human	genbank	57_37b	+1	reviewed	missense	c.296	p.A99V	1.000	HMMPfam_CBF_beta,superfamily_CBF_beta	HMMPfam_CBF_beta,superfamily_CBF_beta	-	no_errors	
CCNB3	85417	genome.wustl.edu	37	X	50094618	50094618	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	50094618	50094618	A	T	SNP	CCNB3	NM_033031	human	genbank	57_37b	+1	reviewed	missense	c.4104	p.E1368D	1.000	HMMPfam_Cyclin_C,superfamily_Cyclin-like	superfamily_Cyclin-like,HMMPfam_Cyclin_N,HMMSmart_SM00385,HMMPfam_Cyclin_C	-	no_errors	
CEP170	9859	genome.wustl.edu	37	1	243289876	243289876	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	243289876	243289876	G	A	SNP	CEP170	NM_014812	human	genbank	57_37b	-1	reviewed	missense	c.4630	p.L1544F	0.998	NULL	superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA	-	no_errors	
FBXW12	285231	genome.wustl.edu	37	3	48416853	48416853	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48416853	48416853	C	T	SNP	FBXW12	NM_207102	human	genbank	57_37b	+1	validated	missense	c.296	p.T99M	0.000	superfamily_SSF81383	PatternScan_WD_REPEATS_1,HMMPfam_F-box,HMMSmart_FBOX,superfamily_SSF81383,superfamily_WD40_like	-	no_errors	
GABRG2	2566	genome.wustl.edu	37	5	161522529	161522529	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	161522529	161522529	G	A	SNP	GABRG2	NM_198903	human	genbank	57_37b	+1	reviewed	missense	c.288	p.M96I	1.000	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors	
GBP1	2633	genome.wustl.edu	37	1	89521803	89521805	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	89521803	89521805	CTT	-	DEL	GBP1	NM_002053	human	genbank	57_37b	-1	validated	in_frame_del	c.1264_1262	p.E421in_frame_del	0.012:0.000:0.000	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP,HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	(deletion:cds_exon[89521699,89521911])	no_errors	
GSPT2	23708	genome.wustl.edu	37	X	51488514	51488514	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	51488514	51488514	A	G	SNP	GSPT2	NM_018094	human	genbank	57_37b	+1	validated	missense	c.1792	p.K598E	1.000	HMMPfam_GTP_EFTU_D3,superfamily_Elong_init_C	HMMPfam_PAM2,superfamily_SSF52540,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,superfamily_Translat_factor,HMMPfam_GTP_EFTU_D2,HMMPfam_GTP_EFTU_D3,superfamily_Elong_init_C	-	no_errors	
HFM1	164045	genome.wustl.edu	37	1	91727807	91727807	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	91727807	91727807	A	G	SNP	HFM1	NM_001017975	human	genbank	57_37b	-1	validated	missense	c.4229	p.V1410A	0.832	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_Sec63	-	no_errors	
IL33	90865	genome.wustl.edu	37	9	6252949	6252949	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	6252949	6252949	T	G	SNP	IL33	NM_033439	human	genbank	57_37b	+1	validated	missense	c.427	p.Y143D	0.078	NULL	NULL	-	no_errors	
JUN	3725	genome.wustl.edu	37	1	59248498	59248498	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	59248498	59248498	T	-	DEL	JUN	NM_002228	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.245	p.Q82fs	1.000	HMMPfam_Jun	HMMPfam_Jun,superfamily_Euk_transcr_DNA,HMMPfam_bZIP_1,HMMSmart_BRLZ,PatternScan_BZIP_BASIC	(deletion:cds_exon[59247747,59248742])	no_errors	
LOC643677	643677	genome.wustl.edu	37	13	103393999	103393999	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	103393999	103393999	G	A	SNP	LOC643677	XM_002344085	human	genbank	57_37b	-1	model	silent	c.8835	p.C2945	0.000	NULL	NULL	-	no_errors	
LYPD4	147719	genome.wustl.edu	37	19	42342215	42342215	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42342215	42342215	C	T	SNP	LYPD4	NM_173506	human	genbank	57_37b	-1	validated	missense	c.332	p.R111Q	0.824	NULL	HMMPfam_UPAR_LY6	-	no_errors	
MIDN	90007	genome.wustl.edu	37	19	1256998	1256998	+	Silent	SNP	C	C	T	rs9823	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1256998	1256998	C	T	SNP	MIDN	NM_177401	human	genbank	57_37b	+1	validated	silent	c.1134	p.D378	1.000	NULL	superfamily_Ubiquitin-like,HMMSmart_SM00213,HMMPfam_ubiquitin	-		
MYH9	4627	genome.wustl.edu	37	22	36697633	36697634	+	In_Frame_Ins	INS	-	-	GAG	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	36697633	36697634	-	GAG	INS	MYH9	NM_002473	human	genbank	57_37b	-1	reviewed	in_frame_ins	c.2578_2577	p.859in_frame_insL	1.000:1.000	NULL	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1,superfamily_Regulator of G-protein signaling RGS	-	no_errors	
NEIL1	79661	genome.wustl.edu	37	15	75647320	75647320	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75647320	75647320	G	A	SNP	NEIL1	NM_024608	human	genbank	57_37b	+1	validated	missense	c.1118	p.R373Q	0.000	NULL	superfamily_N-terminal domain of MutM-like DNA repair proteins,HMMPfam_Fapy_DNA_glyco,superfamily_S13-like H2TH domain,HMMPfam_H2TH,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMPfam_Neil1-DNA_bind	-	no_errors	
NEK1	4750	genome.wustl.edu	37	4	170321765	170321765	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	170321765	170321765	G	A	SNP	NEK1	NM_012224	human	genbank	57_37b	-1	validated	silent	c.3537	p.C1179	0.991	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
OR1L6	392390	genome.wustl.edu	37	9	125512494	125512494	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	125512494	125512494	G	A	SNP	OR1L6	NM_001004453	human	genbank	57_37b	+1	validated	missense	c.476	p.R159Q	0.976	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
PANK4	55229	genome.wustl.edu	37	1	2453186	2453186	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	2453186	2453186	T	C	SNP	PANK4	NM_018216	human	genbank	57_37b	-1	reviewed	missense	c.178	p.K60E	0.987	HMMPfam_Fumble	HMMPfam_Fumble,superfamily_Hypothetical protein At2g17340,HMMPfam_DUF89	-	no_errors	
PCDHGC3	5098	genome.wustl.edu	37	5	140857180	140857180	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140857180	140857180	A	G	SNP	PCDHGC3	NM_002588	human	genbank	57_37b	+1	reviewed	silent	c.1497	p.Q499	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCOLCE	5118	genome.wustl.edu	37	7	100203382	100203382	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100203382	100203382	C	G	SNP	PCOLCE	NM_002593	human	genbank	57_37b	+1	reviewed	silent	c.672	p.A224	0.033	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_TIMP-like,HMMSmart_SM00643,HMMPfam_NTR	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PNPLA6	10908	genome.wustl.edu	37	19	7605077	7605077	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7605077	7605077	C	T	SNP	PNPLA6	NM_006702	human	genbank	57_37b	+1	reviewed	silent	c.480	p.C160	1.000	superfamily_cNMP_binding,HMMSmart_cNMP	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,superfamily_Acyl_Trfase/lysoPlipase,HMMPfam_Patatin,PatternScan_UPF0028	-	no_errors	
PTCH1	5727	genome.wustl.edu	37	9	98215818	98215818	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	98215818	98215818	C	T	SNP	PTCH1	NM_000264	human	genbank	57_37b	-1	reviewed	missense	c.3391	p.V1131M	0.997	HMMPfam_Patched,superfamily_SSF82866	HMMPfam_Patched,superfamily_SSF82866	-	no_errors	
RP1	6101	genome.wustl.edu	37	8	55533670	55533670	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	55533670	55533670	C	T	SNP	RP1	NM_006269	human	genbank	57_37b	+1	reviewed	silent	c.144	p.F48	0.008	superfamily_SSF89837,HMMSmart_DCX	superfamily_SSF89837,HMMSmart_DCX,HMMPfam_DCX	-	no_errors	
SCN4A	6329	genome.wustl.edu	37	17	62018350	62018350	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	62018350	62018350	G	A	SNP	SCN4A	NM_000334	human	genbank	57_37b	-1	reviewed	silent	c.5292	p.D1764	0.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMPfam_IQ	-	no_errors	
SLC2A9	56606	genome.wustl.edu	37	4	9836553	9836553	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	9836553	9836553	G	A	SNP	SLC2A9	NM_020041	human	genbank	57_37b	-1	reviewed	silent	c.1371	p.V457	1.000	superfamily_MFS general substrate transporter,HMMPfam_Sugar_tr	superfamily_MFS general substrate transporter,HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_2,PatternScan_SUGAR_TRANSPORT_1	-	no_errors	
SSPO	23145	genome.wustl.edu	37	7	149489284	149489284	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149489284	149489284	C	T	SNP	SSPO	ENST00000378016	human	ensembl	57_37b	+1	known	silent	c.5529	p.C1843	0.733	superfamily_Serine proterase inhibitors	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_VWC,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_BPTI_KUNITZ_1,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_EGF_1,PatternScan_VWFC_1	-	no_errors	
TBL1XR1	79718	genome.wustl.edu	37	3	176765098	176765098	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	176765098	176765098	C	A	SNP	TBL1XR1	NM_024665	human	genbank	57_37b	-1	reviewed	missense	c.854	p.G285V	1.000	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	HMMSmart_LisH,HMMPfam_LisH,HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
THBS1	7057	genome.wustl.edu	37	15	39883768	39883768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	39883768	39883768	A	G	SNP	THBS1	NM_003246	human	genbank	57_37b	+1	reviewed	missense	c.2476	p.M826V	0.937	superfamily_TSP type-3 repeat,HMMPfam_TSP_3	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_2,superfamily_TSP type-3 repeat,HMMPfam_TSP_3,HMMPfam_TSP_C	-	no_errors	
TMEM145	284339	genome.wustl.edu	37	19	42820840	42820840	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42820840	42820840	C	A	SNP	TMEM145	NM_173633	human	genbank	57_37b	+1	validated	missense	c.754	p.L252I	1.000	HMMPfam_GpcrRhopsn4	HMMPfam_GpcrRhopsn4	-	no_errors	
TNFRSF1A	7132	genome.wustl.edu	37	12	6442643	6442643	+	Missense_Mutation	SNP	C	C	T	rs4149584	byCluster;byFrequency;by1000genomes	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6442643	6442643	C	T	SNP	TNFRSF1A	NM_001065	human	genbank	57_37b	-1	reviewed	missense	c.362	p.R121Q	0.000	HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like	superfamily_TNF receptor-like,HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,PatternScan_EGF_2,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-		
USP54	159195	genome.wustl.edu	37	10	75276172	75276172	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75276172	75276172	C	G	SNP	USP54	NM_152586	human	genbank	57_37b	-1	provisional	missense	c.4012	p.G1338R	0.998	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH	-	no_errors	
WDR60	55112	genome.wustl.edu	37	7	158734813	158734813	+	Silent	SNP	C	C	T	rs34634437	byCluster;byFrequency;by1000genomes	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	158734813	158734813	C	T	SNP	WDR60	NM_018051	human	genbank	57_37b	+1	validated	silent	c.2976	p.V992	0.864	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-		
WWTR1	25937	genome.wustl.edu	37	3	149243909	149243909	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	149243909	149243909	C	A	SNP	WWTR1	NM_015472	human	genbank	57_37b	-1	validated	silent	c.909	p.G303	0.994	NULL	superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1	-	no_errors	
ZNF469	84627	genome.wustl.edu	37	16	88504203	88504203	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	88504203	88504203	G	C	SNP	ZNF469	NM_001127464	human	genbank	57_37b	+1	reviewed	missense	c.10241	p.R3414T	0.002	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZNF592	9640	genome.wustl.edu	37	15	85341673	85341673	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RN-01A-12D-A099-09	TCGA-B6-A0RN-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	85341673	85341673	G	T	SNP	ZNF592	NM_014630	human	genbank	57_37b	+1	validated	missense	c.2704	p.V902L	1.000	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
