Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCA8	10351	genome.wustl.edu	37	17	66925207	66925207	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	66925207	66925207	T	G	SNP	ABCA8	NM_007168	human	genbank	57_37b	-1	reviewed	missense	c.1108	p.M370L	0.561	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	-	no_errors	
ACTN2	88	genome.wustl.edu	37	1	236914954	236914954	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236914954	236914954	T	A	SNP	ACTN2	NM_001103	human	genbank	57_37b	+1	reviewed	splice_site	c.1839+2	e15+2	1.000	-	-	-	no_errors	
APOBEC3B	9582	genome.wustl.edu	37	22	39382037	39382037	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	39382037	39382037	G	A	SNP	APOBEC3B	NM_004900	human	genbank	57_37b	+1	reviewed	missense	c.395	p.R132Q	0.000	superfamily_Cytidine deaminase-like,HMMPfam_APOBEC_C	HMMPfam_APOBEC_N,superfamily_Cytidine deaminase-like,PatternScan_CYT_DCMP_DEAMINASES,HMMPfam_APOBEC_C	-	no_errors	
ASCC1	51008	genome.wustl.edu	37	10	73912678	73912678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	73912678	73912678	C	T	SNP	ASCC1	NM_015947	human	genbank	57_37b	-1	validated	missense	c.695	p.G232D	0.995	NULL	superfamily_SSF54791,HMMSmart_KH,HMMPfam_KH_1	-	no_errors	
ATAD2	29028	genome.wustl.edu	37	8	124359355	124359355	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	124359355	124359355	C	T	SNP	ATAD2	NM_014109	human	genbank	57_37b	-1	reviewed	missense	c.2189	p.R730K	0.013	NULL	HMMPfam_YL1,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain	-	no_errors	
ATP11C	286410	genome.wustl.edu	37	X	138886719	138886719	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	138886719	138886719	G	A	SNP	ATP11C	NM_173694	human	genbank	57_37b	-1	validated	missense	c.475	p.P159S	1.000	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors	
ATP8B3	148229	genome.wustl.edu	37	19	1783122	1783122	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1783122	1783122	G	C	SNP	ATP8B3	NM_138813	human	genbank	57_37b	-1	reviewed	missense	c.3808	p.L1270V	0.849	NULL	superfamily_SSF81653,HMMPfam_E1-E2_ATPase,superfamily_SSF56784,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Hydrolase_3,PatternScan_EF_HAND_1	-	no_errors	
BMP3	651	genome.wustl.edu	37	4	81967606	81967606	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	81967606	81967606	G	A	SNP	BMP3	NM_001201	human	genbank	57_37b	+1	reviewed	missense	c.1031	p.R344Q	0.998	NULL	superfamily_SSF57501,HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1	-	no_errors	
BRPF3	27154	genome.wustl.edu	37	6	36177594	36177594	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	36177594	36177594	G	C	SNP	BRPF3	NM_015695	human	genbank	57_37b	+1	validated	missense	c.1768	p.E590Q	1.000	superfamily_Bromodomain,HMMSmart_BROMO	HMMPfam_EPL1,superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1,superfamily_SSF63748,HMMPfam_PWWP,HMMSmart_PWWP	-	no_errors	
C14orf49	161176	genome.wustl.edu	37	14	95921720	95921720	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	95921720	95921720	G	T	SNP	C14orf49	NM_152592	human	genbank	57_37b	-1	validated	silent	c.1131	p.R377	0.041	NULL	HMMSmart_SM00150,superfamily_Spectrin repeat,HMMPfam_KASH	-	no_errors	
C19orf56	51398	genome.wustl.edu	37	19	12779204	12779204	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12779204	12779204	T	G	SNP	C19orf56	NM_016145	human	genbank	57_37b	-1	validated	missense	c.290	p.Q97P	1.000	HMMPfam_UPF0139	HMMPfam_UPF0139	-	no_errors	
C3orf25	90288	genome.wustl.edu	37	3	129120504	129120504	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	129120504	129120504	G	T	SNP	C3orf25	NM_207307	human	genbank	57_37b	-1	provisional	missense	c.1651	p.P551T	1.000	NULL	PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors	
C3orf35	339883	genome.wustl.edu	37	3	37476359	37476359	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	37476359	37476359	G	A	SNP	C3orf35	NM_178339	human	genbank	57_37b	+1	validated	missense	c.251	p.R84K	0.001	NULL	NULL	-	no_errors	
C4orf49	84709	genome.wustl.edu	37	4	140196454	140196454	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	140196454	140196454	C	T	SNP	C4orf49	NM_032623	human	genbank	57_37b	-1	validated	missense	c.175	p.G59S	1.000	NULL	NULL	-	no_errors	
C9orf41	138199	genome.wustl.edu	37	9	77613613	77613613	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	77613613	77613613	G	A	SNP	C9orf41	NM_152420	human	genbank	57_37b	-1	predicted	nonsense	c.811	p.R271*	1.000	HMMPfam_N2227,superfamily_SSF53335	HMMPfam_N2227,superfamily_SSF53335	-	no_errors	
CACNA1A	773	genome.wustl.edu	37	19	13335577	13335577	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	13335577	13335577	G	A	SNP	CACNA1A	NM_001127222	human	genbank	57_37b	-1	reviewed	missense	c.5635	p.R1879W	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CADPS2	93664	genome.wustl.edu	37	7	122114548	122114548	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	122114548	122114548	C	G	SNP	CADPS2	NM_017954	human	genbank	57_37b	-1	reviewed	missense	c.1885	p.G629R	1.000	NULL	HMMPfam_C2,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_DUF1041	-	no_errors	
CAMK1D	57118	genome.wustl.edu	37	10	12595305	12595305	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	12595305	12595305	G	A	SNP	CAMK1D	NM_153498	human	genbank	57_37b	+1	reviewed	silent	c.174	p.A58	0.992	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
CASC5	57082	genome.wustl.edu	37	15	40903684	40903684	+	Missense_Mutation	SNP	A	G	G	rs12911738	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	40903684	40903684	A	G	SNP	CASC5	NM_170589	human	genbank	57_37b	+1	validated	missense	c.337	p.T113A	0.999	NULL	NULL	-		
CBFA2T3	863	genome.wustl.edu	37	16	88952427	88952427	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	88952427	88952427	C	T	SNP	CBFA2T3	NM_005187	human	genbank	57_37b	-1	reviewed	missense	c.835	p.D279N	1.000	NULL	HMMPfam_TAFH,HMMSmart_SM00549,HMMPfam_NHR2,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1	-	no_errors	
CCDC106	29903	genome.wustl.edu	37	19	56164049	56164049	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	56164049	56164049	G	C	SNP	CCDC106	NM_013301	human	genbank	57_37b	+1	validated	missense	c.780	p.K260N	1.000	NULL	NULL	-	no_errors	
CCDC113	29070	genome.wustl.edu	37	16	58287992	58287992	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	58287992	58287992	G	T	SNP	CCDC113	NM_014157	human	genbank	57_37b	+1	validated	nonsense	c.319	p.E107*	0.995	NULL	NULL	-	no_errors	
CCDC13	152206	genome.wustl.edu	37	3	42754772	42754772	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	42754772	42754772	C	G	SNP	CCDC13	NM_144719	human	genbank	57_37b	-1	validated	missense	c.1755	p.E585D	0.949	NULL	NULL	-	no_errors	
CCND1	595	genome.wustl.edu	37	11	69465940	69465940	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	69465940	69465940	C	T	SNP	CCND1	NM_053056	human	genbank	57_37b	+1	reviewed	missense	c.778	p.R260C	1.000	HMMPfam_Cyclin_C	superfamily_Cyclin-like,HMMPfam_Cyclin_N,PatternScan_CYCLINS,HMMSmart_SM00385,HMMPfam_Cyclin_C	-	no_errors	
CD300LF	146722	genome.wustl.edu	37	17	72699172	72699172	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72699172	72699172	A	T	SNP	CD300LF	NM_139018	human	genbank	57_37b	-1	validated	splice_site	c.446+2	e3+2	0.992	-	-	-	no_errors	
CD93	22918	genome.wustl.edu	37	20	23065739	23065739	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	23065739	23065739	C	A	SNP	CD93	NM_012072	human	genbank	57_37b	-1	reviewed	missense	c.1091	p.G364V	0.996	PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,superfamily_SSF57196,PatternScan_ASX_HYDROXYL	PatternScan_C_TYPE_LECTIN_1,HMMSmart_CLECT,superfamily_C-type_lectin_fold,HMMPfam_Lectin_C,HMMSmart_EGF,superfamily_SSF57196,PatternScan_EGF_2,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL	-	no_errors	
CEACAM18	729767	genome.wustl.edu	37	19	51986358	51986358	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51986358	51986358	A	G	SNP	CEACAM18	NM_001080405	human	genbank	57_37b	+1	provisional	missense	c.944	p.E315G	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	-	no_errors	
CHD3	1107	genome.wustl.edu	37	17	7798780	7798780	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7798780	7798780	C	T	SNP	CHD3	NM_001005271	human	genbank	57_37b	+1	reviewed	nonsense	c.1804	p.Q602*	1.000	HMMSmart_SM00298,superfamily_Chromo domain-like	HMMPfam_CHDNT,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00298,superfamily_Chromo domain-like,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_CHROMO_1,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_DUF1087,HMMPfam_DUF1086,HMMPfam_CHDCT2	-	no_errors	
CHN1	1123	genome.wustl.edu	37	2	175673727	175673727	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	175673727	175673727	G	A	SNP	CHN1	NM_001822	human	genbank	57_37b	-1	reviewed	silent	c.1008	p.I336	1.000	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
CLPX	10845	genome.wustl.edu	37	15	65456441	65456441	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	65456441	65456441	C	G	SNP	CLPX	NM_006660	human	genbank	57_37b	-1	provisional	missense	c.599	p.R200T	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA_2,HMMSmart_SM00382,HMMPfam_ClpB_D2-small	-	no_errors	
COG4	25839	genome.wustl.edu	37	16	70542309	70542309	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70542309	70542309	C	T	SNP	COG4	NM_015386	human	genbank	57_37b	-1	validated	missense	c.1061	p.R354K	1.000	HMMPfam_COG4,HMMSmart_SM00762	HMMPfam_COG4,HMMSmart_SM00762	-	no_errors	
COL29A1	256076	genome.wustl.edu	37	3	130119918	130119918	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	130119918	130119918	T	C	SNP	COL29A1	NM_153264	human	genbank	57_37b	+1	validated	silent	c.4035	p.H1345	0.002	superfamily_SSF53300	superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_Collagen	-	no_errors	
CSMD1	64478	genome.wustl.edu	37	8	3216706	3216706	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	3216706	3216706	C	T	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	missense	c.3275	p.R1092H	1.000	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors	
CTCF	10664	genome.wustl.edu	37	16	67644837	67644837	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	67644837	67644837	A	G	SNP	CTCF	NM_006565	human	genbank	57_37b	+1	reviewed	silent	c.102	p.E34	1.000	NULL	HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors	
CTNNA2	1496	genome.wustl.edu	37	2	80620360	80620360	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	80620360	80620360	C	T	SNP	CTNNA2	NM_004389	human	genbank	57_37b	+1	validated	missense	c.1081	p.P361S	1.000	HMMPfam_Vinculin	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin,PatternScan_VINCULIN_1	-	no_errors	
DBNDD2	55861	genome.wustl.edu	37	20	44037247	44037248	+	Splice_Site	INS	-	-	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	44037247	44037248	-	T	INS	DBNDD2	NM_001048221	human	genbank	57_37b	+1	validated	splice_site_ins	c.139+1_139+1	e1+1	1.000:1.000	-	-	-	no_errors	
DCHS2	54798	genome.wustl.edu	37	4	155410719	155410719	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	155410719	155410719	C	A	SNP	DCHS2	NM_001142552	human	genbank	57_37b	-1	validated	missense	c.1789	p.V597F	0.018	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1	-	no_errors	
DNAH10	196385	genome.wustl.edu	37	12	124417966	124417966	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124417966	124417966	G	A	SNP	DNAH10	NM_207437	human	genbank	57_37b	+1	validated	missense	c.13031	p.R4344Q	1.000	HMMPfam_Dynein_heavy	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DOPEY1	23033	genome.wustl.edu	37	6	83847715	83847715	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	83847715	83847715	C	T	SNP	DOPEY1	NM_015018	human	genbank	57_37b	+1	validated	silent	c.3954	p.L1318	0.991	NULL	HMMPfam_Dopey_N	-	no_errors	
EFTUD1	79631	genome.wustl.edu	37	15	82533624	82533624	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	82533624	82533624	C	T	SNP	EFTUD1	NM_024580	human	genbank	57_37b	-1	validated	missense	c.365	p.G122E	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU,superfamily_Translation proteins,superfamily_EF-G C-terminal domain-like,superfamily_Ribosomal protein S5 domain 2-like,HMMPfam_EFG_IV,HMMPfam_EFG_C	-	no_errors	
EGFLAM	133584	genome.wustl.edu	37	5	38407076	38407076	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	38407076	38407076	C	A	SNP	EGFLAM	NM_152403	human	genbank	57_37b	+1	validated	silent	c.975	p.P325	0.998	NULL	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,HMMSmart_EGF,superfamily_ConA_like_lec_gl,PatternScan_EGF_1,HMMSmart_LamG,HMMPfam_Laminin_G_1,HMMPfam_EGF,PatternScan_EGF_2,HMMPfam_Laminin_G_2	-	no_errors	
ENPP4	22875	genome.wustl.edu	37	6	46108029	46108029	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	46108029	46108029	G	T	SNP	ENPP4	NM_014936	human	genbank	57_37b	+1	validated	missense	c.709	p.D237Y	1.000	superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest	superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest	-	no_errors	
ENSG00000146677	0	genome.wustl.edu	37	7	44507638	44507638	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44507638	44507638	G	C	SNP	ENSG00000146677	ENST00000275524	human	ensembl	57_37b	+1	known	missense	c.143	p.R48T	0.984	superfamily_Ribosomal protein L32e,HMMPfam_Ribosomal_L32e	superfamily_Ribosomal protein L32e,HMMPfam_Ribosomal_L32e	-	no_errors	
ENSG00000245472	0	genome.wustl.edu	37	19	53208097	53208097	+	RNA	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53208097	53208097	C	A	SNP	ENSG00000245472	ENST00000500065	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	
EPHA3	2042	genome.wustl.edu	37	3	89176423	89176423	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	89176423	89176423	G	T	SNP	EPHA3	NM_005233	human	genbank	57_37b	+1	reviewed	silent	c.153	p.G51	1.000	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMSmart_SM00454,HMMPfam_SAM_2,superfamily_SAM/Pointed domain	-	no_errors	
EPHA5	2044	genome.wustl.edu	37	4	66467434	66467434	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	66467434	66467434	C	T	SNP	EPHA5	NM_004439	human	genbank	57_37b	-1	reviewed	missense	c.835	p.E279K	1.000	PatternScan_RECEPTOR_TYR_KIN_V_2	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,HMMPfam_BmKX,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors	
FAM167B	84734	genome.wustl.edu	37	1	32713189	32713189	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	32713189	32713189	G	A	SNP	FAM167B	NM_032648	human	genbank	57_37b	+1	validated	missense	c.167	p.R56H	0.000	NULL	NULL	-	no_errors	
FIGN	55137	genome.wustl.edu	37	2	164467143	164467143	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	164467143	164467143	G	A	SNP	FIGN	NM_018086	human	genbank	57_37b	-1	validated	missense	c.1199	p.T400I	1.000	NULL	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
GAS6	2621	genome.wustl.edu	37	13	114530000	114530000	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	114530000	114530000	C	T	SNP	GAS6	NM_000820	human	genbank	57_37b	-1	reviewed	silent	c.1446	p.G482	0.070	superfamily_ConA_like_lec_gl	HMMSmart_GLA,superfamily_VitK_dep_GLA,HMMPfam_Gla,PatternScan_GLA_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF,HMMPfam_EGF_CA,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	-	no_errors	
GCK	2645	genome.wustl.edu	37	7	44189394	44189394	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44189394	44189394	T	A	SNP	GCK	NM_033507	human	genbank	57_37b	-1	reviewed	missense	c.647	p.Y216F	1.000	HMMPfam_Hexokinase_1,superfamily_SSF53067	HMMPfam_Hexokinase_1,superfamily_SSF53067,PatternScan_HEXOKINASES,HMMPfam_Hexokinase_2	-	no_errors	
GIMAP1	170575	genome.wustl.edu	37	7	150417441	150417441	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150417441	150417441	C	T	SNP	GIMAP1	NM_130759	human	genbank	57_37b	+1	reviewed	silent	c.349	p.L117	0.998	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AIG1	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AIG1	-	no_errors	
GRID1	2894	genome.wustl.edu	37	10	87362343	87362343	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	87362343	87362343	C	A	SNP	GRID1	NM_017551	human	genbank	57_37b	-1	reviewed	missense	c.2717	p.G906V	1.000	PatternScan_ALDEHYDE_DEHYDR_GLU	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors	
GYG1	2992	genome.wustl.edu	37	3	148744285	148744285	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	148744285	148744285	G	C	SNP	GYG1	NM_004130	human	genbank	57_37b	+1	provisional	missense	c.875	p.R292T	1.000	NULL	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_8	-	no_errors	
HCN4	10021	genome.wustl.edu	37	15	73635795	73635795	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	73635795	73635795	C	T	SNP	HCN4	NM_005477	human	genbank	57_37b	-1	reviewed	silent	c.1140	p.T380	0.998	superfamily_SSF81324,HMMPfam_Ion_trans	PatternScan_CNMP_BINDING_2,HMMPfam_Ion_trans_N,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1	-	no_errors	
HIST1H1E	3008	genome.wustl.edu	37	6	26156800	26156800	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26156800	26156800	C	T	SNP	HIST1H1E	NM_005321	human	genbank	57_37b	+1	reviewed	missense	c.182	p.A61V	1.000	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00526,HMMPfam_Linker_histone"	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00526,HMMPfam_Linker_histone"	-	no_errors	
HKR1	284459	genome.wustl.edu	37	19	37853010	37853010	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37853010	37853010	G	A	SNP	HKR1	NM_181786	human	genbank	57_37b	+1	provisional	splice_site	c.314-1	e4-1	0.981	-	-	-	no_errors	
HOXA3	3200	genome.wustl.edu	37	7	27148069	27148069	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	27148069	27148069	C	T	SNP	HOXA3	NM_030661	human	genbank	57_37b	-1	reviewed	missense	c.797	p.R266H	1.000	NULL	PatternScan_ANTENNAPEDIA,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
HPSE	10855	genome.wustl.edu	37	4	84216541	84216542	+	Frame_Shift_Del	DEL	TA	TA	-	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	TA	TA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	84216541	84216542	TA	-	DEL	HPSE	NM_001098540	human	genbank	57_37b	-1	validated	frame_shift_del	c.1588_1587	p.Y529fs	0.412:0.338	NULL	superfamily_(Trans)glycosidases,HMMPfam_Glyco_hydro_79n	(deletion:cds_exon[84216497,84216656])	no_errors	
IAPP	3375	genome.wustl.edu	37	12	21526336	21526336	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	21526336	21526336	G	T	SNP	IAPP	NM_000415	human	genbank	57_37b	+1	reviewed	missense	c.51	p.L17F	0.000	NULL	HMMPfam_Calc_CGRP_IAPP,HMMSmart_CALCITONIN,PatternScan_CALCITONIN	-	no_errors	
IFNA4	3441	genome.wustl.edu	37	9	21187338	21187338	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	21187338	21187338	C	T	SNP	IFNA4	NM_021068	human	genbank	57_37b	-1	validated	missense	c.193	p.E65K	0.000	HMMPfam_Interferon,superfamily_4_helix_cytokine,HMMSmart_IFabd	HMMPfam_Interferon,superfamily_4_helix_cytokine,HMMSmart_IFabd,PatternScan_INTERFERON_A_B_D	-	no_errors	
ITGA7	3679	genome.wustl.edu	37	12	56086681	56086681	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56086681	56086681	T	G	SNP	ITGA7	NM_001144996	human	genbank	57_37b	-1	reviewed	missense	c.2803	p.S935R	0.997	HMMPfam_Integrin_alpha2,superfamily_Integrin domains	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors	
KCNH7	90134	genome.wustl.edu	37	2	163302698	163302698	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	163302698	163302698	A	T	SNP	KCNH7	NM_033272	human	genbank	57_37b	-1	reviewed	missense	c.1384	p.F462I	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_PYP-like sensor domain (PAS domain),superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	-	no_errors	
KDM4B	23030	genome.wustl.edu	37	19	5131979	5131979	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5131979	5131979	C	A	SNP	KDM4B	NM_015015	human	genbank	57_37b	+1	validated	missense	c.1867	p.P623T	1.000	NULL	HMMSmart_SM00545,HMMPfam_JmjN,HMMSmart_SM00558,HMMPfam_JmjC,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,HMMSmart_SM00333,superfamily_Tudor/PWWP/MBT,HMMPfam_LBR_tudor	-	no_errors	
KIAA1797	54914	genome.wustl.edu	37	9	20862673	20862673	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	20862673	20862673	C	G	SNP	KIAA1797	NM_017794	human	genbank	57_37b	+1	validated	missense	c.2017	p.L673V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	
KNG1	3827	genome.wustl.edu	37	3	186459855	186459855	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	186459855	186459855	C	T	SNP	KNG1	NM_001102416	human	genbank	57_37b	+1	reviewed	missense	c.1670	p.T557I	0.001	NULL	HMMSmart_SM00043,HMMPfam_Cystatin,superfamily_Cystatin/monellin,PatternScan_CYSTATIN	-	no_errors	
LMAN1	3998	genome.wustl.edu	37	18	57016441	57016441	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	57016441	57016441	C	T	SNP	LMAN1	NM_005570	human	genbank	57_37b	-1	reviewed	missense	c.667	p.D223N	1.000	superfamily_ConA_like_lec_gl,HMMPfam_Lectin_leg-like	superfamily_ConA_like_lec_gl,HMMPfam_Lectin_leg-like	-	no_errors	
LOC100287226	0	genome.wustl.edu	37	19	22499779	22499779	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	22499779	22499779	C	T	SNP	LOC100287226	XM_002343636	human	genbank	57_37b	+1	model	missense	c.3161	p.P1054L	0.048	superfamily_C2H2 and C2HC zinc fingers	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
LOC100287308	0	genome.wustl.edu	37	15	65386863	65386863	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	65386863	65386863	C	G	SNP	LOC100287308	XM_002343349	human	genbank	57_37b	-1	model	missense	c.286	p.E96Q	1.000	NULL	NULL	-	no_errors	
LOC441228	441228	genome.wustl.edu	37	7	56358575	56358575	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	56358575	56358575	C	T	SNP	LOC441228	XR_016387	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-	no_errors	
LOC442308	442308	genome.wustl.edu	37	7	55714565	55714565	+	RNA	SNP	T	T	C	rs113994822	by1000genomes	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	55714565	55714565	T	C	SNP	LOC442308	NR_003598	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	1.000	-	-	-		
LOC643677	643677	genome.wustl.edu	37	13	103390877	103390877	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	103390877	103390877	G	C	SNP	LOC643677	XM_002344085	human	genbank	57_37b	-1	model	nonsense	c.11957	p.S3986*	0.001	NULL	NULL	-	no_errors	
LOC647546	647546	genome.wustl.edu	37	12	3223535	3223535	+	Missense_Mutation	SNP	C	T	T	rs2335345	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	3223535	3223535	C	T	SNP	LOC647546	XM_936601	human	genbank	57_37b	-1	model	missense	c.9827	p.R3276H	0.011	NULL	NULL	-		
LPCAT1	79888	genome.wustl.edu	37	5	1463771	1463771	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	1463771	1463771	C	G	SNP	LPCAT1	NM_024830	human	genbank	57_37b	-1	validated	missense	c.1600	p.D534H	0.788	NULL	PatternScan_EF_HAND_1,superfamily_SSF69593,HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF47473,HMMSmart_EFh	-	no_errors	
LRP1B	53353	genome.wustl.edu	37	2	141253162	141253162	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	141253162	141253162	A	T	SNP	LRP1B	NM_018557	human	genbank	57_37b	-1	validated	missense	c.9006	p.D3002E	1.000	HMMPfam_EGF_CA,HMMSmart_EGF_CA	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b,HMMPfam_EGF,HMMPfam_NHL,HMMPfam_EGF_2,PatternScan_EGF_1	-	no_errors	
MAP3K4	4216	genome.wustl.edu	37	6	161470713	161470713	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	161470713	161470713	G	-	DEL	MAP3K4	NM_005922	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1409	p.V471fs	0.001	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	(deletion:cds_exon[161469648,161471011])	no_errors	
MEFV	4210	genome.wustl.edu	37	16	3293384	3293384	+	Silent	SNP	C	C	T	rs104895095	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3293384	3293384	C	T	SNP	MEFV	NM_000243	human	genbank	57_37b	-1	reviewed	silent	c.2103	p.A701	0.000	HMMPfam_SPRY,HMMSmart_SM00449	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-		
MRC2	9902	genome.wustl.edu	37	17	60758213	60758213	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	60758213	60758213	C	-	DEL	MRC2	NM_006039	human	genbank	57_37b	+1	validated	frame_shift_del	c.2526	p.H843fs	0.994	HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C	superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin,superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,PatternScan_LIPOCALIN	(deletion:cds_exon[60758161,60758321])	no_errors	
MSMP	0	genome.wustl.edu	37	9	35754070	35754070	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35754070	35754070	C	A	SNP	MSMP	NM_001044264	human	genbank	57_37b	-1	provisional	silent	c.57	p.G19	0.024	NULL	NULL	-	no_errors	
MTIF2	4528	genome.wustl.edu	37	2	55463924	55463924	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55463924	55463924	C	T	SNP	MTIF2	NM_001005369	human	genbank	57_37b	-1	reviewed	missense	c.2044	p.D682N	1.000	superfamily_Translat_factor,PatternScan_IF2	superfamily_SSF52540,HMMPfam_GTP_EFTU,superfamily_Translat_factor,HMMPfam_GTP_EFTU_D2,superfamily_SSF52156,PatternScan_IF2	-	no_errors	
MUC16	94025	genome.wustl.edu	37	19	9085910	9085910	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9085910	9085910	G	T	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.5905	p.P1969T	0.345	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MUC16	94025	genome.wustl.edu	37	19	9090329	9090329	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9090329	9090329	T	A	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.1486	p.S496C	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors	
MUC6	4588	genome.wustl.edu	37	11	1016361	1016361	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1016361	1016361	G	T	SNP	MUC6	NM_005961	human	genbank	57_37b	-1	validated	missense	c.6440	p.S2147Y	0.004	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00215,HMMSmart_SM00041	-	no_errors	
MYH1	4619	genome.wustl.edu	37	17	10408797	10408797	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10408797	10408797	C	T	SNP	MYH1	NM_005963	human	genbank	57_37b	-1	reviewed	missense	c.2206	p.E736K	1.000	superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
MYO5C	55930	genome.wustl.edu	37	15	52497096	52497096	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	52497096	52497096	C	T	SNP	MYO5C	NM_018728	human	genbank	57_37b	-1	validated	missense	c.4786	p.D1596N	1.000	HMMPfam_DIL	superfamily_Myosin S1 fragment N-terminal domain,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_DIL	-	no_errors	
MYO9A	4649	genome.wustl.edu	37	15	72144513	72144513	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	72144513	72144513	G	C	SNP	MYO9A	NM_006901	human	genbank	57_37b	-1	validated	silent	c.6435	p.L2145	1.000	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	HMMPfam_RA,HMMSmart_SM00314,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
NEBL	10529	genome.wustl.edu	37	10	21157693	21157693	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	21157693	21157693	G	T	SNP	NEBL	NM_006393	human	genbank	57_37b	-1	validated	missense	c.584	p.A195E	1.000	HMMSmart_SM00227	HMMSmart_SM00227,HMMPfam_Nebulin,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
NELL2	4753	genome.wustl.edu	37	12	44926499	44926499	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	44926499	44926499	C	T	SNP	NELL2	NM_001145107	human	genbank	57_37b	-1	reviewed	missense	c.1819	p.D607N	1.000	superfamily_SSF57196,PatternScan_EGF_CA,HMMSmart_EGF_CA	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_EGF_1	-	no_errors	
NEUROD1	4760	genome.wustl.edu	37	2	182542944	182542944	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	182542944	182542944	G	A	SNP	NEUROD1	NM_002500	human	genbank	57_37b	-1	reviewed	missense	c.644	p.P215L	0.910	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors	
NLRC4	58484	genome.wustl.edu	37	2	32476391	32476391	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	32476391	32476391	C	T	SNP	NLRC4	ENST00000360906	human	ensembl	57_37b	-1	known	missense	c.542	p.R181Q	0.989	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT	HMMPfam_CARD,superfamily_DEATH domain,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,superfamily_RNI-like	-	no_errors	
NUP160	23279	genome.wustl.edu	37	11	47833723	47833723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47833723	47833723	C	T	SNP	NUP160	NM_015231	human	genbank	57_37b	-1	validated	missense	c.2134	p.A712T	0.818	NULL	PatternScan_HIS_ACID_PHOSPHAT_1	-	no_errors	
NUPL2	11097	genome.wustl.edu	37	7	23221797	23221798	+	In_Frame_Ins	INS	-	-	CGGCAGCAACCG	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	23221797	23221798	-	CGGCAGCAACCG	INS	NUPL2	NM_007342	human	genbank	57_37b	+1	validated	in_frame_ins	c.93_94	p.35in_frame_insRQQP	0.999:1.000	NULL	HMMPfam_zf-CCCH,HMMSmart_SM00356	-	no_errors	
OBFC1	79991	genome.wustl.edu	37	10	105658674	105658674	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105658674	105658674	G	T	SNP	OBFC1	NM_024928	human	genbank	57_37b	-1	validated	missense	c.542	p.P181H	1.000	HMMPfam_DUF1879	superfamily_Nucleic_acid_OB,HMMPfam_tRNA_anti,HMMPfam_DUF1879	-	no_errors	
OBSCN	84033	genome.wustl.edu	37	1	228432172	228432172	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	228432172	228432172	C	T	SNP	OBSCN	NM_001098623	human	genbank	57_37b	+1	reviewed	silent	c.3381	p.C1127	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_V-set,HMMSmart_SM00015,HMMPfam_IQ,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Protein kinase-like (PK-like),PatternScan_GLYCOSYL_HYDROL_F5,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
OR4F5	79501	genome.wustl.edu	37	1	69523	69523	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	69523	69523	G	T	SNP	OR4F5	NM_001005484	human	genbank	57_37b	+1	provisional	missense	c.433	p.G145C	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR51V1	283111	genome.wustl.edu	37	11	5221089	5221089	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5221089	5221089	G	A	SNP	OR51V1	NM_001004760	human	genbank	57_37b	-1	validated	missense	c.842	p.A281V	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR6S1	341799	genome.wustl.edu	37	14	21109676	21109676	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	21109676	21109676	T	A	SNP	OR6S1	NM_001001968	human	genbank	57_37b	-1	provisional	missense	c.175	p.T59S	0.575	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR8H2	390151	genome.wustl.edu	37	11	55872841	55872841	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55872841	55872841	G	T	SNP	OR8H2	NM_001005200	human	genbank	57_37b	+1	provisional	missense	c.323	p.G108V	0.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
PARP10	84875	genome.wustl.edu	37	8	145057946	145057946	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145057946	145057946	C	G	SNP	PARP10	NM_032789	human	genbank	57_37b	-1	validated	missense	c.1811	p.G604A	0.750	NULL	HMMSmart_UIM,superfamily_SSF56399,HMMPfam_PARP	-	no_errors	
PCDHGA3	56112	genome.wustl.edu	37	5	140725012	140725012	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140725012	140725012	T	A	SNP	PCDHGA3	NM_018916	human	genbank	57_37b	+1	reviewed	missense	c.1412	p.I471N	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCLO	27445	genome.wustl.edu	37	7	82764214	82764214	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	82764214	82764214	G	A	SNP	PCLO	NM_033026	human	genbank	57_37b	-1	validated	silent	c.2652	p.T884	0.000	NULL	superfamily_FYVE/PHD zinc finger,HMMPfam_zf-piccolo,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
PDE4D	5144	genome.wustl.edu	37	5	58334711	58334711	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	58334711	58334711	G	T	SNP	PDE4D	NM_001104631	human	genbank	57_37b	-1	validated	missense	c.896	p.S299Y	1.000	NULL	superfamily_HD-domain/PDEase-like,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors	
PEX1	5189	genome.wustl.edu	37	7	92143236	92143236	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	92143236	92143236	C	T	SNP	PEX1	NM_000466	human	genbank	57_37b	-1	reviewed	missense	c.1285	p.V429I	1.000	NULL	superfamily_Cdc48 domain 2-like,HMMPfam_PEX-2N,superfamily_ADC-like,HMMPfam_PEX-1N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
PLAU	5328	genome.wustl.edu	37	10	75675049	75675049	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75675049	75675049	G	A	SNP	PLAU	NM_002658	human	genbank	57_37b	+1	reviewed	silent	c.1011	p.V337	0.929	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	superfamily_Kringle-like,PatternScan_EGF_1,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
PLG	5340	genome.wustl.edu	37	6	161137755	161137755	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	161137755	161137755	C	A	SNP	PLG	NM_000301	human	genbank	57_37b	+1	reviewed	missense	c.747	p.D249E	0.966	superfamily_Kringle-like,HMMSmart_KR,HMMPfam_Kringle	HMMPfam_PAN_1,superfamily_SSF57414,HMMSmart_PAN_AP,superfamily_Kringle-like,HMMSmart_KR,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
PPM1G	5496	genome.wustl.edu	37	2	27606873	27606873	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27606873	27606873	G	A	SNP	PPM1G	NM_002707	human	genbank	57_37b	-1	reviewed	silent	c.912	p.D304	0.024	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C,PatternScan_PP2C	-	no_errors	
PRRT2	112476	genome.wustl.edu	37	16	29824982	29824982	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	29824982	29824982	C	T	SNP	PRRT2	NM_145239	human	genbank	57_37b	+1	validated	missense	c.607	p.P203S	0.339	NULL	HMMPfam_CD225	-	no_errors	
PTPLAD2	401494	genome.wustl.edu	37	9	21011668	21011668	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	21011668	21011668	A	G	SNP	PTPLAD2	NM_001010915	human	genbank	57_37b	-1	validated	missense	c.410	p.I137T	0.958	HMMPfam_PTPLA	HMMPfam_PTPLA	-	no_errors	
RAD51L3	5892	genome.wustl.edu	37	17	33430502	33430502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	33430502	33430502	G	A	SNP	RAD51L3	NM_001142571	human	genbank	57_37b	-1	reviewed	missense	c.698	p.S233F	1.000	superfamily_SSF52540,HMMPfam_HhH-GPD,HMMSmart_AAA	superfamily_SSF52540,HMMPfam_HhH-GPD,HMMSmart_AAA	-	no_errors	
RASAL2	9462	genome.wustl.edu	37	1	178435229	178435229	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	178435229	178435229	G	T	SNP	RASAL2	NM_170692	human	genbank	57_37b	+1	reviewed	missense	c.3529	p.D1177Y	1.000	NULL	HMMSmart_PH,superfamily_SSF50729,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,HMMSmart_RasGAP,superfamily_Rho_GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1	-	no_errors	
RTKN2	219790	genome.wustl.edu	37	10	64000922	64000922	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	64000922	64000922	C	G	SNP	RTKN2	NM_145307	human	genbank	57_37b	-1	provisional	missense	c.349	p.D117H	1.000	NULL	HMMSmart_SM00742,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
SCN1B	6324	genome.wustl.edu	37	19	35530584	35530584	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	35530584	35530584	G	A	SNP	SCN1B	NM_001037	human	genbank	57_37b	+1	reviewed	silent	c.636	p.T212	0.879	NULL	superfamily_Immunoglobulin,HMMPfam_ig	-	no_errors	
SEC24C	9632	genome.wustl.edu	37	10	75520490	75520490	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75520490	75520490	G	C	SNP	SEC24C	NM_004922	human	genbank	57_37b	+1	reviewed	silent	c.870	p.R290	0.958	superfamily_beta-sandwich domain of Sec23/24	superfamily_beta-sandwich domain of Sec23/24,superfamily_Zn-finger domain of Sec23/24,HMMPfam_zf-Sec23_Sec24,HMMPfam_Sec23_trunk,superfamily_vWA-like,HMMPfam_Sec23_BS,superfamily_Helical domain of Sec23/24,HMMPfam_Sec23_helical,superfamily_C-terminal gelsolin-like domain of Sec23/24,HMMPfam_Gelsolin,PatternScan_GLYCOSYL_HYDROL_F1_1	-	no_errors	
SFI1	9814	genome.wustl.edu	37	22	32009792	32009792	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	32009792	32009792	C	T	SNP	SFI1	NM_001007467	human	genbank	57_37b	+1	validated	silent	c.2947	p.L983	0.000	NULL	NULL	-	no_errors	
SH2B1	25970	genome.wustl.edu	37	16	28883552	28883552	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28883552	28883552	G	A	SNP	SH2B1	NM_015503	human	genbank	57_37b	+1	reviewed	missense	c.1555	p.D519N	1.000	superfamily_SH2 domain	HMMPfam_Phe_ZIP,superfamily_Phenylalanine zipper,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors	
SHC2	25759	genome.wustl.edu	37	19	438818	438818	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	438818	438818	G	T	SNP	SHC2	NM_012435	human	genbank	57_37b	-1	validated	missense	c.620	p.A207E	1.000	superfamily_SSF50729,HMMSmart_PTB,HMMPfam_PID	superfamily_SSF50729,HMMSmart_PTB,HMMPfam_PID,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	-	no_errors	
SHD	56961	genome.wustl.edu	37	19	4290544	4290544	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4290544	4290544	G	A	SNP	SHD	NM_020209	human	genbank	57_37b	+1	validated	missense	c.937	p.V313I	1.000	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	-	no_errors	
SLC15A1	6564	genome.wustl.edu	37	13	99364112	99364112	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	99364112	99364112	T	A	SNP	SLC15A1	NM_005073	human	genbank	57_37b	-1	validated	missense	c.896	p.Q299L	1.000	superfamily_MFS general substrate transporter,HMMPfam_PTR2	superfamily_MFS general substrate transporter,PatternScan_PTR2_1,HMMPfam_PTR2,PatternScan_PTR2_2	-	no_errors	
SLC6A18	348932	genome.wustl.edu	37	5	1232966	1232966	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	1232966	1232966	G	T	SNP	SLC6A18	NM_182632	human	genbank	57_37b	+1	validated	silent	c.402	p.L134	0.916	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_2	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors	
SLITRK4	139065	genome.wustl.edu	37	X	142718314	142718314	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	142718314	142718314	C	A	SNP	SLITRK4	NM_173078	human	genbank	57_37b	-1	validated	missense	c.611	p.R204L	1.000	superfamily_L domain-like	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00365,HMMSmart_SM00082,HMMPfam_LRRNT	-	no_errors	
SPTA1	6708	genome.wustl.edu	37	1	158648298	158648298	+	Silent	SNP	A	A	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158648298	158648298	A	T	SNP	SPTA1	NM_003126	human	genbank	57_37b	-1	reviewed	silent	c.705	p.I235	0.023	HMMPfam_Spectrin,superfamily_Spectrin repeat,HMMSmart_SM00150	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_EF-hand,HMMPfam_efhand_Ca_insen	-	no_errors	
SRGAP2P2	0	genome.wustl.edu	37	1	144014068	144014068	+	Missense_Mutation	SNP	T	T	C	rs1884146	byCluster;byFrequency;by2Hit2Allele;byHapMap	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	144014068	144014068	T	C	SNP	SRGAP2P2	ENST00000360154	human	ensembl	57_37b	+1	known	missense	c.235	p.C79R	0.998	HMMPfam_FCH,HMMSmart_SM00055	HMMPfam_FCH,HMMSmart_SM00055	-		
SSPO	23145	genome.wustl.edu	37	7	149475874	149475874	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149475874	149475874	G	A	SNP	SSPO	ENST00000378016	human	ensembl	57_37b	+1	known	silent	c.840	p.L280	0.999	HMMSmart_SM00216,HMMPfam_VWD	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_VWC,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_BPTI_KUNITZ_1,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_EGF_1,PatternScan_VWFC_1	-	no_errors	
STRN	6801	genome.wustl.edu	37	2	37111155	37111155	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	37111155	37111155	G	A	SNP	STRN	NM_003162	human	genbank	57_37b	-1	validated	missense	c.1106	p.S369L	1.000	NULL	HMMPfam_Striatin,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
STRN3	29966	genome.wustl.edu	37	14	31381308	31381308	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	31381308	31381308	T	C	SNP	STRN3	NM_001083893	human	genbank	57_37b	-1	validated	silent	c.1455	p.A485	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	HMMPfam_Striatin,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
SVIL	6840	genome.wustl.edu	37	10	29839670	29839670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	29839670	29839670	G	A	SNP	SVIL	NM_021738	human	genbank	57_37b	-1	reviewed	missense	c.683	p.S228L	0.112	NULL	superfamily_Actin depolymerizing proteins,HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_VHP Villin headpiece domain,HMMPfam_VHP,HMMSmart_SM00153	-	no_errors	
TAX1BP1	8887	genome.wustl.edu	37	7	27856569	27856569	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	27856569	27856569	C	G	SNP	TAX1BP1	NM_006024	human	genbank	57_37b	+1	validated	missense	c.1997	p.S666C	0.004	NULL	HMMPfam_CALCOCO1	-	no_errors	
TCTN2	79867	genome.wustl.edu	37	12	124191321	124191321	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124191321	124191321	C	G	SNP	TCTN2	NM_024809	human	genbank	57_37b	+1	validated	missense	c.1818	p.H606Q	0.001	NULL	HMMPfam_DUF1619	-	no_errors	
TGM6	343641	genome.wustl.edu	37	20	2380303	2380303	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	2380303	2380303	A	T	SNP	TGM6	NM_198994	human	genbank	57_37b	+1	validated	missense	c.769	p.I257F	1.000	superfamily_Cysteine proteinases	HMMPfam_Transglut_N,superfamily_E set domains,superfamily_Cysteine proteinases,HMMSmart_SM00460,HMMPfam_Transglut_core,PatternScan_TRANSGLUTAMINASES,superfamily_Transglutaminase two C-terminal domains,HMMPfam_Transglut_C	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578534	7578534	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578534	7578534	C	G	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.396	p.K132N	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TRIM58	25893	genome.wustl.edu	37	1	248039226	248039226	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248039226	248039226	C	T	SNP	TRIM58	NM_015431	human	genbank	57_37b	+1	validated	missense	c.896	p.T299M	0.999	HMMSmart_PRY	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
TRIM6	117854	genome.wustl.edu	37	11	5632304	5632304	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5632304	5632304	G	A	SNP	TRIM6	NM_001003818	human	genbank	57_37b	+1	reviewed	missense	c.1283	p.G428E	0.997	HMMPfam_SPRY,HMMSmart_SPRY	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179479066	179479066	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179479066	179479066	C	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.41354	p.G13785V	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TULP1	7287	genome.wustl.edu	37	6	35477415	35477415	+	Missense_Mutation	SNP	C	C	A	rs9688653	byCluster	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	35477415	35477415	C	A	SNP	TULP1	NM_003322	human	genbank	57_37b	-1	reviewed	missense	c.714	p.K238N	1.000	NULL	superfamily_Transcriptional factor tubby C-terminal domain,HMMPfam_Tub,PatternScan_TUB_1,PatternScan_TUB_2	-		
UNC13B	10497	genome.wustl.edu	37	9	35399191	35399191	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35399191	35399191	G	A	SNP	UNC13B	NM_006377	human	genbank	57_37b	+1	reviewed	silent	c.3861	p.T1287	0.126	HMMPfam_Membr_traf_MHD	HMMSmart_C2,superfamily_C2_CaLB,HMMPfam_C2,superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD	-	no_errors	
UNC5D	137970	genome.wustl.edu	37	8	35583857	35583857	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	35583857	35583857	G	A	SNP	UNC5D	NM_080872	human	genbank	57_37b	+1	validated	silent	c.1491	p.E497	0.572	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,PatternScan_SERPIN,HMMPfam_ZU5,HMMSmart_SM00218,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors	
VSIG10	54621	genome.wustl.edu	37	12	118511558	118511558	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	118511558	118511558	G	A	SNP	VSIG10	NM_019086	human	genbank	57_37b	-1	validated	nonsense	c.1165	p.R389*	1.000	HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00408,HMMPfam_ig,HMMSmart_SM00406	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_ig	-	no_errors	
WAS	7454	genome.wustl.edu	37	X	48546700	48546700	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48546700	48546700	C	T	SNP	WAS	NM_000377	human	genbank	57_37b	+1	reviewed	silent	c.789	p.L263	0.832	HMMPfam_PBD,HMMSmart_PBD,superfamily_WASP_C	superfamily_SSF50729,HMMPfam_WH1,HMMSmart_WH1,HMMPfam_PBD,HMMSmart_PBD,superfamily_WASP_C,HMMPfam_WH2,HMMSmart_WH2	-	no_errors	
XRRA1	143570	genome.wustl.edu	37	11	74632307	74632307	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	74632307	74632307	G	A	SNP	XRRA1	NM_182969	human	genbank	57_37b	-1	validated	missense	c.584	p.T195I	0.999	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	-	no_errors	
ZFX	7543	genome.wustl.edu	37	X	24228434	24228434	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	24228434	24228434	G	A	SNP	ZFX	NM_003410	human	genbank	57_37b	+1	validated	silent	c.1359	p.K453	1.000	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_Zfx_Zfy_act,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF182	7569	genome.wustl.edu	37	X	47836619	47836619	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47836619	47836619	G	A	SNP	ZNF182	NM_006962	human	genbank	57_37b	-1	validated	silent	c.867	p.P289	0.368	superfamily_SSF57667	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF418	147686	genome.wustl.edu	37	19	58439287	58439287	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58439287	58439287	C	G	SNP	ZNF418	NM_133460	human	genbank	57_37b	-1	provisional	missense	c.262	p.G88R	0.001	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667,HMMPfam_zf-C2H2	-	no_errors	
ZNF467	168544	genome.wustl.edu	37	7	149463318	149463318	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149463318	149463318	C	G	SNP	ZNF467	NM_207336	human	genbank	57_37b	-1	provisional	missense	c.273	p.W91C	1.000	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF614	80110	genome.wustl.edu	37	19	52521663	52521663	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52521663	52521663	G	A	SNP	ZNF614	NM_025040	human	genbank	57_37b	-1	validated	missense	c.100	p.R34W	0.053	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF717	377064	genome.wustl.edu	37	3	75788181	75788184	+	Frame_Shift_Del	DEL	TGAG	TGAG	-	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	TGAG	TGAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	75788181	75788184	TGAG	-	DEL	ZNF717	NM_001128223	human	genbank	57_37b	-1	validated	frame_shift_del	c.593_590	p.T197fs	0.000:0.000:0.000:0.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	(deletion:cds_exon[75786029,75788496])	no_errors	
ZNF835	90485	genome.wustl.edu	37	19	57175732	57175732	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57175732	57175732	G	C	SNP	ZNF835	NM_001005850	human	genbank	57_37b	-1	provisional	missense	c.901	p.R301G	0.001	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF841	284371	genome.wustl.edu	37	19	52569672	52569672	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0BP-01A-11D-A10Y-09	TCGA-BH-A0BP-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52569672	52569672	T	C	SNP	ZNF841	NM_001136499	human	genbank	57_37b	-1	validated	missense	c.1463	p.N488S	0.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,PatternScan_IG_MHC	-	no_errors	
