Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ACSL5	51703	genome.wustl.edu	37	10	114168281	114168281	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	114168281	114168281	T	C	SNP	ACSL5	NM_016234	human	genbank	57_37b	+1	reviewed	splice_site	c.700+2	e6+2	1.000	-	-	-	no_errors	
ACTRT1	139741	genome.wustl.edu	37	X	127186074	127186074	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	127186074	127186074	C	T	SNP	ACTRT1	NM_138289	human	genbank	57_37b	-1	validated	missense	c.112	p.V38I	0.970	HMMPfam_Actin,superfamily_SSF53067,HMMSmart_ACTIN	HMMPfam_Actin,superfamily_SSF53067,HMMSmart_ACTIN	-	no_errors	
AP3B1	8546	genome.wustl.edu	37	5	77385315	77385315	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	77385315	77385315	C	A	SNP	AP3B1	NM_003664	human	genbank	57_37b	-1	reviewed	missense	c.2479	p.V827L	0.982	NULL	HMMPfam_Adaptin_N,superfamily_ARM repeat	-	no_errors	
BRD7P3	23629	genome.wustl.edu	37	6	118822566	118822566	+	RNA	SNP	C	C	T	rs933257	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-11A-12D-A100-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	118822566	118822566	C	T	SNP	BRD7P3	NR_002730	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.007	-	-	-		
C14orf106	55320	genome.wustl.edu	37	14	45687625	45687625	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	45687625	45687625	C	A	SNP	C14orf106	NM_018353	human	genbank	57_37b	-1	validated	missense	c.2702	p.G901V	1.000	superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	HMMPfam_SANTA,superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors	
C15orf58	390637	genome.wustl.edu	37	15	90784678	90784678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	90784678	90784678	C	T	SNP	C15orf58	NM_001013657	human	genbank	57_37b	+1	validated	missense	c.538	p.R180C	1.000	NULL	PatternScan_PHOSPHOPANTETHEINE	-	no_errors	
CCDC102B	79839	genome.wustl.edu	37	18	66504078	66504078	+	Silent	SNP	C	C	T	rs61998185	by1000genomes	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	66504078	66504078	C	T	SNP	CCDC102B	NM_001093729	human	genbank	57_37b	+1	validated	silent	c.78	p.R26	0.000	NULL	NULL	-		
CDYL	9425	genome.wustl.edu	37	6	4892446	4892446	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	4892446	4892446	A	G	SNP	CDYL	NM_004824	human	genbank	57_37b	+1	reviewed	missense	c.524	p.D175G	1.000	NULL	superfamily_Chromodomain-like,HMMSmart_CHROMO,HMMPfam_Chromo,PatternScan_CHROMO_1,superfamily_SSF52096,HMMPfam_ECH	-	no_errors	
COL16A1	1307	genome.wustl.edu	37	1	32127285	32127285	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	32127285	32127285	G	A	SNP	COL16A1	NM_001856	human	genbank	57_37b	-1	reviewed	silent	c.3702	p.G1234	0.922	HMMPfam_Collagen	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Collagen	-	no_errors	
CSMD3	114788	genome.wustl.edu	37	8	113564901	113564901	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	113564901	113564901	G	C	SNP	CSMD3	NM_198123	human	genbank	57_37b	-1	validated	missense	c.4283	p.S1428C	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors	
DMXL1	1657	genome.wustl.edu	37	5	118469457	118469457	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	118469457	118469457	T	G	SNP	DMXL1	NM_005509	human	genbank	57_37b	+1	validated	missense	c.1838	p.V613G	1.000	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_SUBTILASE_ASP,PatternScan_WD_REPEATS_1	-	no_errors	
EEF1A2	1917	genome.wustl.edu	37	20	62119747	62119747	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62119747	62119747	C	T	SNP	EEF1A2	NM_001958	human	genbank	57_37b	-1	reviewed	silent	c.1296	p.T432	0.813	HMMPfam_GTP_EFTU_D3,superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,superfamily_Translation proteins,HMMPfam_GTP_EFTU_D2,HMMPfam_GTP_EFTU_D3,superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	-	no_errors	
ENSG00000230626	0	genome.wustl.edu	37	7	128766822	128766822	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	128766822	128766822	T	G	SNP	ENSG00000230626	ENST00000423578	human	ensembl	57_37b	+1	known	missense	c.251	p.V84G	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	-	no_errors	
FAM127C	441518	genome.wustl.edu	37	X	134156265	134156265	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	134156265	134156265	G	A	SNP	FAM127C	NM_001078173	human	genbank	57_37b	-1	validated	silent	c.225	p.P75	0.394	NULL	NULL	-	no_errors	
GTF2H3	2967	genome.wustl.edu	37	12	124144342	124144342	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124144342	124144342	T	A	SNP	GTF2H3	NM_001516	human	genbank	57_37b	+1	provisional	missense	c.685	p.W229R	1.000	HMMPfam_Tfb4	HMMPfam_Tfb4	-	no_errors	
HSP90AA4P	0	genome.wustl.edu	37	4	190395259	190395259	+	Missense_Mutation	SNP	C	C	G	rs13143685	byCluster;by1000genomes	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-11A-12D-A100-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	190395259	190395259	C	G	SNP	HSP90AA4P	ENST00000378770	human	ensembl	57_37b	+1	known	missense	c.538	p.L180V	1.000	HMMPfam_HSP90,superfamily_Ribosomal protein S5 domain 2-like	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_HATPase_c,HMMPfam_HSP90,superfamily_Ribosomal protein S5 domain 2-like,superfamily_HSP90 C-terminal domain (C-terminal part of Pfam 00183)	-		
INPP4B	8821	genome.wustl.edu	37	4	143067052	143067052	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	143067052	143067052	C	T	SNP	INPP4B	NM_001101669	human	genbank	57_37b	-1	reviewed	missense	c.1661	p.G554D	0.216	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors	
KIAA0913	23053	genome.wustl.edu	37	10	75560085	75560085	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75560085	75560085	A	-	DEL	KIAA0913	NM_015037	human	genbank	57_37b	+1	validated	frame_shift_del	c.4881	p.A1628fs	0.990	NULL	HMMPfam_SWIM	(deletion:cds_exon[75560054,75560230])	no_errors	
KIAA0913	23053	genome.wustl.edu	37	10	75560085	75560085	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-11A-12D-A100-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75560085	75560085	A	-	DEL	KIAA0913	NM_015037	human	genbank	57_37b	+1	validated	frame_shift_del	c.4881	p.A1628fs	0.990	NULL	HMMPfam_SWIM	(deletion:cds_exon[75560054,75560230])	no_errors	
LAMA1	284217	genome.wustl.edu	37	18	7040119	7040119	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	7040119	7040119	C	T	SNP	LAMA1	NM_005559	human	genbank	57_37b	-1	validated	missense	c.1378	p.G460S	1.000	superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_2,HMMSmart_SM00281,HMMPfam_Laminin_B,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMSmart_SM00282,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-	no_errors	
MAP2K7	5609	genome.wustl.edu	37	19	7974955	7974956	+	Frame_Shift_Ins	INS	-	-	TT	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7974955	7974956	-	TT	INS	MAP2K7	NM_145185	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.274_275	p.D93fs	1.000:1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MFI2	4241	genome.wustl.edu	37	3	196751207	196751207	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	196751207	196751207	G	A	SNP	MFI2	NM_005929	human	genbank	57_37b	-1	reviewed	missense	c.454	p.R152C	1.000	superfamily_Periplasmic binding protein-like II,HMMPfam_Transferrin,HMMSmart_SM00094	superfamily_Periplasmic binding protein-like II,HMMPfam_Transferrin,HMMSmart_SM00094,PatternScan_TRANSFERRIN_1,PatternScan_TRANSFERRIN_2,PatternScan_TRANSFERRIN_3	-	no_errors	
MINK1	50488	genome.wustl.edu	37	17	4796018	4796018	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	4796018	4796018	G	A	SNP	MINK1	NM_153827	human	genbank	57_37b	+1	reviewed	missense	c.2266	p.G756R	0.107	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_ZINC_FINGER_C2H2_1,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00036,HMMPfam_CNH	-	no_errors	
NOD1	10392	genome.wustl.edu	37	7	30491714	30491714	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	30491714	30491714	C	T	SNP	NOD1	NM_006092	human	genbank	57_37b	-1	reviewed	missense	c.1319	p.S440N	1.000	NULL	superfamily_DEATH_like,HMMPfam_CARD,HMMPfam_NACHT,superfamily_SSF52047	-	no_errors	
NRP2	8828	genome.wustl.edu	37	2	206610543	206610543	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	206610543	206610543	G	A	SNP	NRP2	NM_201266	human	genbank	57_37b	+1	reviewed	missense	c.1715	p.R572Q	1.000	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMSmart_SM00137,HMMPfam_MAM	-	no_errors	
PERP	64065	genome.wustl.edu	37	6	138413301	138413301	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	138413301	138413301	C	T	SNP	PERP	NM_022121	human	genbank	57_37b	-1	validated	missense	c.460	p.G154S	1.000	NULL	NULL	-	no_errors	
PGAP1	80055	genome.wustl.edu	37	2	197709249	197709249	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	197709249	197709249	A	G	SNP	PGAP1	NM_024989	human	genbank	57_37b	-1	validated	missense	c.2336	p.V779A	0.986	NULL	HMMPfam_PGAP1,superfamily_alpha/beta-Hydrolases	-	no_errors	
RING1	6015	genome.wustl.edu	37	6	33179664	33179664	+	Missense_Mutation	SNP	A	A	G	rs117965510	by1000genomes	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	33179664	33179664	A	G	SNP	RING1	NM_002931	human	genbank	57_37b	+1	reviewed	missense	c.1004	p.E335G	1.000	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1	-		
RNF44	22838	genome.wustl.edu	37	5	175957174	175957174	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-11A-12D-A100-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	175957174	175957174	T	G	SNP	RNF44	NM_014901	human	genbank	57_37b	-1	reviewed	missense	c.835	p.T279P	1.000	NULL	PatternScan_ZF_RING_1,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4	-	no_errors	
SF3B1	23451	genome.wustl.edu	37	2	198266834	198266834	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	198266834	198266834	T	C	SNP	SF3B1	NM_012433	human	genbank	57_37b	-1	reviewed	missense	c.2098	p.K700E	1.000	superfamily_ARM repeat,HMMPfam_HEAT	HMMPfam_SF3b1,superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
SLC24A6	80024	genome.wustl.edu	37	12	113737727	113737727	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	113737727	113737727	C	T	SNP	SLC24A6	NM_024959	human	genbank	57_37b	-1	validated	missense	c.1610	p.S537N	1.000	HMMPfam_Na_Ca_ex	HMMPfam_Na_Ca_ex	-	no_errors	
SMYD2	56950	genome.wustl.edu	37	1	214504346	214504346	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	214504346	214504346	C	T	SNP	SMYD2	NM_020197	human	genbank	57_37b	+1	validated	silent	c.870	p.A290	0.928	NULL	HMMSmart_SET,superfamily_SSF82199,PatternScan_ZF_MYND_1,HMMPfam_zf-MYND	-	no_errors	
TECTA	7007	genome.wustl.edu	37	11	121030932	121030933	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	121030932	121030933	-	C	INS	TECTA	NM_005422	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.4778_4779	p.D1595fs	1.000:1.000	HMMSmart_SM00216,HMMPfam_VWD	HMMSmart_SM00539,HMMPfam_NIDO,HMMSmart_SM00215,HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00181,PatternScan_EGF_2,PatternScan_FA58C_2,HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1,superfamily_EGF/Laminin	-	no_errors	
TRAF3IP3	80342	genome.wustl.edu	37	1	209933427	209933427	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-11A-12D-A100-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	209933427	209933427	T	G	SNP	TRAF3IP3	NM_025228	human	genbank	57_37b	+1	provisional	missense	c.43	p.W15G	0.025	NULL	NULL	-	no_errors	
TSGA10	80705	genome.wustl.edu	37	2	99634761	99634761	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	99634761	99634761	A	T	SNP	TSGA10	NM_025244	human	genbank	57_37b	-1	validated	nonsense	c.1974	p.Y658*	0.995	NULL	NULL	-	no_errors	
TSGA10	80705	genome.wustl.edu	37	2	99634761	99634761	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-11A-12D-A100-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	99634761	99634761	A	T	SNP	TSGA10	NM_025244	human	genbank	57_37b	-1	validated	nonsense	c.1974	p.Y658*	0.995	NULL	NULL	-	no_errors	
WNK3	65267	genome.wustl.edu	37	X	54335680	54335680	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54335680	54335680	C	T	SNP	WNK3	NM_020922	human	genbank	57_37b	-1	validated	missense	c.779	p.G260E	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
WWP2	11060	genome.wustl.edu	37	16	69965057	69965057	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	69965057	69965057	C	T	SNP	WWP2	NM_007014	human	genbank	57_37b	+1	reviewed	missense	c.1448	p.T483M	0.014	NULL	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_HECT,HMMSmart_HECTc,HMMPfam_HECT	-	no_errors	
XAGE-4	139629	genome.wustl.edu	37	X	55661137	55661137	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	55661137	55661137	C	T	SNP	XAGE-4	XR_040958	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.517	-	-	-	no_errors	
ZNF460	10794	genome.wustl.edu	37	19	57802202	57802202	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57802202	57802202	G	A	SNP	ZNF460	NM_006635	human	genbank	57_37b	+1	validated	missense	c.293	p.G98E	0.002	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF574	64763	genome.wustl.edu	37	19	42584233	42584233	+	Missense_Mutation	SNP	A	A	G	rs117871439	by1000genomes	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-11A-12D-A100-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42584233	42584233	A	G	SNP	ZNF574	NM_022752	human	genbank	57_37b	+1	validated	missense	c.1475	p.E492G	1.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-		
ZNF626	199777	genome.wustl.edu	37	19	20807185	20807185	+	Missense_Mutation	SNP	C	C	T	rs10408597	byCluster;by2Hit2Allele	TCGA-BH-A0DQ-01A-11D-A099-09	TCGA-BH-A0DQ-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	20807185	20807185	C	T	SNP	ZNF626	NM_001076675	human	genbank	57_37b	-1	validated	missense	c.1498	p.E500K	0.995	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-		
