Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
A1CF	29974	genome.wustl.edu	37	10	52595854	52595854	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	52595854	52595854	G	A	SNP	A1CF	NM_138932	human	genbank	57_37b	-1	reviewed	missense	c.584	p.A195V	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,superfamily_dsRNA-binding domain-like	-	no_errors	
A2ML1	144568	genome.wustl.edu	37	12	9001389	9001389	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	9001389	9001389	C	G	SNP	A2ML1	NM_144670	human	genbank	57_37b	+1	validated	missense	c.1907	p.S636C	0.165	NULL	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep	-	no_errors	
ABCA13	154664	genome.wustl.edu	37	7	48427518	48427518	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	48427518	48427518	C	T	SNP	ABCA13	NM_152701	human	genbank	57_37b	+1	reviewed	missense	c.11435	p.S3812F	0.093	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	-	no_errors	
ADNP	23394	genome.wustl.edu	37	20	49508164	49508164	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	49508164	49508164	C	G	SNP	ADNP	NM_015339	human	genbank	57_37b	-1	reviewed	missense	c.3087	p.K1029N	1.000	NULL	PatternScan_HOMEOBOX_1,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	-	no_errors	
ADNP	23394	genome.wustl.edu	37	20	49508391	49508391	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	49508391	49508391	C	G	SNP	ADNP	NM_015339	human	genbank	57_37b	-1	reviewed	missense	c.2860	p.D954H	0.948	NULL	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1	-	no_errors	
ADNP	23394	genome.wustl.edu	37	20	49508687	49508687	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	49508687	49508687	C	G	SNP	ADNP	NM_015339	human	genbank	57_37b	-1	reviewed	missense	c.2564	p.R855T	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1	-	no_errors	
AFF1	4299	genome.wustl.edu	37	4	87968288	87968288	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	87968288	87968288	C	T	SNP	AFF1	NM_005935	human	genbank	57_37b	+1	validated	missense	c.580	p.P194S	0.002	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors	
AFF3	3899	genome.wustl.edu	37	2	100625289	100625289	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	100625289	100625289	G	T	SNP	AFF3	NM_001025108	human	genbank	57_37b	-1	reviewed	missense	c.234	p.F78L	1.000	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors	
AHI1	54806	genome.wustl.edu	37	6	135749885	135749885	+	Silent	SNP	C	C	T	rs41288017	byCluster	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	135749885	135749885	C	T	SNP	AHI1	NM_001134830	human	genbank	57_37b	-1	reviewed	silent	c.2505	p.R835	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-		
AHNAK2	113146	genome.wustl.edu	37	14	105409680	105409680	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105409680	105409680	G	A	SNP	AHNAK2	NM_138420	human	genbank	57_37b	-1	validated	silent	c.12108	p.L4036	0.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_Involucrin	-	no_errors	
AHNAK2	113146	genome.wustl.edu	37	14	105414690	105414690	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105414690	105414690	G	T	SNP	AHNAK2	NM_138420	human	genbank	57_37b	-1	validated	silent	c.7098	p.L2366	0.000	NULL	HMMPfam_Involucrin,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors	
AK3L1	205	genome.wustl.edu	37	1	65656505	65656505	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	65656505	65656505	C	T	SNP	AK3L1	NM_001005353	human	genbank	57_37b	+1	reviewed	silent	c.258	p.L86	0.001	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK,PatternScan_ADENYLATE_KINASE	"superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK,PatternScan_ADENYLATE_KINASE,superfamily_Microbial and mitochondrial ADK insert ""zinc finger"" domain,HMMPfam_ADK_lid"	-	no_errors	
AKR1C1	1645	genome.wustl.edu	37	10	5014915	5014915	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	5014915	5014915	G	A	SNP	AKR1C1	NM_001353	human	genbank	57_37b	+1	reviewed	missense	c.820	p.E274K	0.331	superfamily_Aldo/ket_red,HMMPfam_Aldo_ket_red,PatternScan_ALDOKETO_REDUCTASE_3	superfamily_Aldo/ket_red,HMMPfam_Aldo_ket_red,PatternScan_ALDOKETO_REDUCTASE_1,PatternScan_ALDOKETO_REDUCTASE_2,PatternScan_ALDOKETO_REDUCTASE_3	-	no_errors	
ANK3	288	genome.wustl.edu	37	10	61815778	61815778	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	61815778	61815778	C	G	SNP	ANK3	NM_020987	human	genbank	57_37b	-1	reviewed	missense	c.12703	p.D4235H	1.000	NULL	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_ZU5,HMMSmart_ZU5,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors	
ANK3	288	genome.wustl.edu	37	10	61832745	61832745	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	61832745	61832745	C	G	SNP	ANK3	NM_020987	human	genbank	57_37b	-1	reviewed	missense	c.7894	p.E2632Q	1.000	NULL	HMMPfam_Death,HMMSmart_DEATH,HMMPfam_ZU5,HMMSmart_ZU5,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_DEATH_like	-	no_errors	
ANKLE2	23141	genome.wustl.edu	37	12	133306539	133306539	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	133306539	133306539	C	G	SNP	ANKLE2	NM_015114	human	genbank	57_37b	-1	validated	missense	c.2209	p.D737H	1.000	NULL	HMMPfam_LEM,superfamily_LEM domain,superfamily_Ankyrin repeat	-	no_errors	
ANTXRL	195977	genome.wustl.edu	37	10	47682811	47682811	+	RNA	SNP	G	G	A	rs2999446	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	47682811	47682811	G	A	SNP	ANTXRL	NR_003601	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.000	-	-	-		
APAF1	317	genome.wustl.edu	37	12	99042512	99042512	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	99042512	99042512	C	T	SNP	APAF1	NM_181861	human	genbank	57_37b	+1	reviewed	missense	c.247	p.L83F	1.000	superfamily_WD40 repeat-like,HMMPfam_CARD	superfamily_WD40 repeat-like,HMMPfam_CARD,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NB-ARC,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
ARHGAP23	57636	genome.wustl.edu	37	17	36623403	36623403	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	36623403	36623403	G	A	SNP	ARHGAP23	NM_020876	human	genbank	57_37b	+1	provisional	silent	c.1197	p.Q399	1.000	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
ARHGAP30	257106	genome.wustl.edu	37	1	161018228	161018228	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	161018228	161018228	G	A	SNP	ARHGAP30	NM_001025598	human	genbank	57_37b	-1	validated	silent	c.2583	p.L861	0.033	NULL	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
ARHGAP32	0	genome.wustl.edu	37	11	128844843	128844843	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	128844843	128844843	G	C	SNP	ARHGAP32	NM_001142685	human	genbank	57_37b	-1	validated	missense	c.2207	p.S736C	1.000	NULL	superfamily_PX domain,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
ARMC7	79637	genome.wustl.edu	37	17	73106677	73106677	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73106677	73106677	G	A	SNP	ARMC7	NM_024585	human	genbank	57_37b	+1	provisional	missense	c.211	p.E71K	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_Arm	-	no_errors	
ARMCX2	9823	genome.wustl.edu	37	X	100911132	100911132	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	100911132	100911132	C	T	SNP	ARMCX2	NM_014782	human	genbank	57_37b	-1	reviewed	silent	c.1443	p.L481	1.000	superfamily_ARM-type_fold,HMMPfam_DUF634	superfamily_ARM-type_fold,HMMPfam_DUF634	-	no_errors	
ARMCX2	9823	genome.wustl.edu	37	X	100911530	100911530	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	100911530	100911530	C	G	SNP	ARMCX2	NM_014782	human	genbank	57_37b	-1	reviewed	missense	c.1045	p.E349Q	1.000	superfamily_ARM-type_fold	HMMPfam_DUF634,superfamily_ARM-type_fold	-	no_errors	
ATAD2B	54454	genome.wustl.edu	37	2	24011418	24011418	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	24011418	24011418	G	C	SNP	ATAD2B	NM_017552	human	genbank	57_37b	-1	validated	missense	c.2740	p.Q914E	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
ATP2B1	490	genome.wustl.edu	37	12	90005123	90005123	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	90005123	90005123	C	T	SNP	ATP2B1	NM_001682	human	genbank	57_37b	-1	reviewed	silent	c.2094	p.Q698	1.000	superfamily_SSF81665,superfamily_SSF56784,HMMPfam_Hydrolase	HMMPfam_Cation_ATPase_N,superfamily_SSF81665,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Cation_ATPase_C	-	no_errors	
BMP2K	55589	genome.wustl.edu	37	4	79831828	79831828	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	79831828	79831828	C	G	SNP	BMP2K	NM_198892	human	genbank	57_37b	+1	reviewed	missense	c.2127	p.I709M	0.004	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
BRCC3	79184	genome.wustl.edu	37	X	154327650	154327650	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	154327650	154327650	G	A	SNP	BRCC3	NM_024332	human	genbank	57_37b	+1	reviewed	silent	c.609	p.Q203	0.999	NULL	HMMPfam_Mov34,superfamily_JAB1/MPN domain,HMMSmart_SM00232	-	no_errors	
BUB1	699	genome.wustl.edu	37	2	111398712	111398712	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	111398712	111398712	C	G	SNP	BUB1	NM_004336	human	genbank	57_37b	-1	reviewed	missense	c.2854	p.D952H	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220	HMMPfam_Mad3_BUB1_I,HMMSmart_SM00777,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
C10orf93	255352	genome.wustl.edu	37	10	134751139	134751139	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	134751139	134751139	C	T	SNP	C10orf93	NM_173572	human	genbank	57_37b	-1	validated	missense	c.577	p.E193K	0.998	NULL	NULL	-	no_errors	
C16orf63	123811	genome.wustl.edu	37	16	15973705	15973705	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15973705	15973705	G	C	SNP	C16orf63	NM_144600	human	genbank	57_37b	-1	provisional	silent	c.267	p.L89	1.000	NULL	HMMSmart_LisH	-	no_errors	
C1QTNF2	114898	genome.wustl.edu	37	5	159776212	159776212	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	159776212	159776212	A	T	SNP	C1QTNF2	NM_031908	human	genbank	57_37b	-1	validated	missense	c.956	p.L319Q	1.000	HMMSmart_SM00110,superfamily_TNF-like,HMMPfam_C1q	HMMPfam_Collagen,HMMSmart_SM00110,superfamily_TNF-like,HMMPfam_C1q	-	no_errors	
C20orf111	51526	genome.wustl.edu	37	20	42835595	42835595	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	42835595	42835595	C	G	SNP	C20orf111	NM_016470	human	genbank	57_37b	-1	provisional	missense	c.3	p.M1I	1.000	HMMPfam_DUF776	HMMPfam_DUF776	-	no_errors	
C22orf28	51493	genome.wustl.edu	37	22	32788229	32788229	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	32788229	32788229	C	G	SNP	C22orf28	NM_014306	human	genbank	57_37b	-1	validated	missense	c.1408	p.E470Q	1.000	superfamily_Hypothetical protein PH1602,HMMPfam_UPF0027	superfamily_Hypothetical protein PH1602,HMMPfam_UPF0027,PatternScan_UPF0027	-	no_errors	
C3orf33	285315	genome.wustl.edu	37	3	155493550	155493550	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	155493550	155493550	C	G	SNP	C3orf33	NM_173657	human	genbank	57_37b	-1	predicted	missense	c.133	p.E45Q	0.805	superfamily_Staphylococal_nuclease_OB-fold	superfamily_Staphylococal_nuclease_OB-fold	-	no_errors	
CABYR	26256	genome.wustl.edu	37	18	21741479	21741479	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	21741479	21741479	G	C	SNP	CABYR	NM_012189	human	genbank	57_37b	+1	reviewed	splice_site	c.1482-1	e4-1	1.000	-	-	-	no_errors	
CACNA1E	777	genome.wustl.edu	37	1	181767970	181767970	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	181767970	181767970	G	A	SNP	CACNA1E	NM_000721	human	genbank	57_37b	+1	reviewed	silent	c.6813	p.*2271	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CACNA1S	779	genome.wustl.edu	37	1	201030419	201030419	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	201030419	201030419	C	T	SNP	CACNA1S	NM_000069	human	genbank	57_37b	-1	reviewed	silent	c.3231	p.K1077	1.000	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CATSPER2	117155	genome.wustl.edu	37	15	43940233	43940233	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	43940233	43940233	C	T	SNP	CATSPER2	NM_172095	human	genbank	57_37b	-1	reviewed	silent	c.27	p.Q9	0.010	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors	
CCNB3	85417	genome.wustl.edu	37	X	50052923	50052923	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	50052923	50052923	C	T	SNP	CCNB3	NM_033031	human	genbank	57_37b	+1	reviewed	missense	c.1754	p.S585L	0.001	NULL	superfamily_Cyclin-like,HMMPfam_Cyclin_N,HMMSmart_SM00385,HMMPfam_Cyclin_C	-	no_errors	
CDH1	999	genome.wustl.edu	37	16	68844099	68844099	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	68844099	68844099	G	A	SNP	CDH1	NM_004360	human	genbank	57_37b	+1	reviewed	splice_site	c.688-1	e6-1	1.000	-	-	-	no_errors	
CDON	50937	genome.wustl.edu	37	11	125871671	125871671	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	125871671	125871671	C	G	SNP	CDON	NM_016952	human	genbank	57_37b	-1	validated	missense	c.2101	p.E701Q	0.965	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
CENPN	55839	genome.wustl.edu	37	16	81062223	81062223	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	81062223	81062223	G	C	SNP	CENPN	NM_001100624	human	genbank	57_37b	+1	validated	missense	c.987	p.K329N	0.615	HMMPfam_CHL4	HMMPfam_CHL4	-	no_errors	
CFH	3075	genome.wustl.edu	37	1	196695948	196695948	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	196695948	196695948	C	T	SNP	CFH	NM_000186	human	genbank	57_37b	+1	reviewed	missense	c.2114	p.S705F	0.256	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
CHD1L	9557	genome.wustl.edu	37	1	146759364	146759364	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	146759364	146759364	C	T	SNP	CHD1L	NM_004284	human	genbank	57_37b	+1	validated	nonsense	c.2272	p.R758*	0.948	NULL	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
CHRNA9	55584	genome.wustl.edu	37	4	40351124	40351124	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	40351124	40351124	C	T	SNP	CHRNA9	NM_017581	human	genbank	57_37b	+1	reviewed	silent	c.591	p.F197	1.000	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors	
CLSTN1	22883	genome.wustl.edu	37	1	9794165	9794165	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	9794165	9794165	C	T	SNP	CLSTN1	NM_001009566	human	genbank	57_37b	-1	validated	missense	c.2146	p.D716N	0.998	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors	
CNNM2	54805	genome.wustl.edu	37	10	104836880	104836880	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104836880	104836880	G	A	SNP	CNNM2	NM_017649	human	genbank	57_37b	+1	validated	silent	c.2571	p.Q857	1.000	NULL	HMMPfam_DUF21,HMMPfam_CBS	-	no_errors	
CNPY1	285888	genome.wustl.edu	37	7	155301698	155301698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	155301698	155301698	G	A	SNP	CNPY1	NM_001103176	human	genbank	57_37b	-1	validated	missense	c.35	p.T12M	0.142	NULL	NULL	-	no_errors	
CREB3L1	90993	genome.wustl.edu	37	11	46334219	46334219	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	46334219	46334219	G	C	SNP	CREB3L1	NM_052854	human	genbank	57_37b	+1	validated	missense	c.960	p.K320N	1.000	HMMPfam_bZIP_1,HMMSmart_SM00338	superfamily_A DNA-binding domain in eukaryotic transcription factors,HMMPfam_bZIP_1,HMMSmart_SM00338,PatternScan_BZIP_BASIC	-	no_errors	
CSF2RB	1439	genome.wustl.edu	37	22	37334464	37334464	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	37334464	37334464	C	A	SNP	CSF2RB	NM_000395	human	genbank	57_37b	+1	reviewed	missense	c.2614	p.Q872K	0.998	NULL	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_S_F1	-	no_errors	
CSTF3	1479	genome.wustl.edu	37	11	33107491	33107491	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	33107491	33107491	G	A	SNP	CSTF3	NM_001326	human	genbank	57_37b	-1	reviewed	missense	c.1840	p.P614S	1.000	HMMPfam_Suf	superfamily_TPR-like,HMMSmart_SM00386,HMMPfam_Suf	-	no_errors	
CTDSPL	10217	genome.wustl.edu	37	3	38006086	38006086	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38006086	38006086	G	A	SNP	CTDSPL	NM_001008392	human	genbank	57_37b	+1	validated	missense	c.292	p.E98K	1.000	superfamily_HAD-like,HMMPfam_NIF	superfamily_HAD-like,HMMPfam_NIF,HMMSmart_SM00577	-	no_errors	
CYP2C18	1562	genome.wustl.edu	37	10	96447986	96447986	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	96447986	96447986	C	T	SNP	CYP2C18	NM_000772	human	genbank	57_37b	+1	reviewed	nonsense	c.436	p.Q146*	0.118	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors	
CYP4B1	1580	genome.wustl.edu	37	1	47283813	47283813	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	47283813	47283813	C	T	SNP	CYP4B1	NM_001099772	human	genbank	57_37b	+1	reviewed	missense	c.1283	p.S428F	0.999	superfamily_Cytochrome_P450,HMMPfam_p450	superfamily_Cytochrome_P450,HMMPfam_p450,PatternScan_CYTOCHROME_P450	-	no_errors	
DDX11	1663	genome.wustl.edu	37	12	31249282	31249282	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	31249282	31249282	G	A	SNP	DDX11	NM_152438	human	genbank	57_37b	+1	reviewed	missense	c.1490	p.R497Q	0.999	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00488,HMMPfam_DEAD_2,HMMSmart_SM00491	-	no_errors	
DMXL1	1657	genome.wustl.edu	37	5	118468832	118468832	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	118468832	118468832	G	A	SNP	DMXL1	NM_005509	human	genbank	57_37b	+1	validated	missense	c.1321	p.D441N	1.000	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_SUBTILASE_ASP,PatternScan_WD_REPEATS_1	-	no_errors	
DNAH3	55567	genome.wustl.edu	37	16	20975814	20975814	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20975814	20975814	C	G	SNP	DNAH3	NM_017539	human	genbank	57_37b	-1	provisional	missense	c.9392	p.G3131A	1.000	NULL	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_Prefoldin,HMMPfam_Dynein_heavy	-	no_errors	
DNAJC11	55735	genome.wustl.edu	37	1	6727831	6727831	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6727831	6727831	C	G	SNP	DNAJC11	NM_018198	human	genbank	57_37b	-1	validated	missense	c.316	p.E106Q	1.000	superfamily_Chaperone J-domain	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ,PatternScan_DNAJ_1	-	no_errors	
DNAJC6	9829	genome.wustl.edu	37	1	65878608	65878608	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	65878608	65878608	C	G	SNP	DNAJC6	NM_014787	human	genbank	57_37b	+1	validated	missense	c.2642	p.A881G	1.000	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_PTEN_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ	-	no_errors	
DNPEP	23549	genome.wustl.edu	37	2	220251466	220251466	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	220251466	220251466	G	T	SNP	DNPEP	NM_012100	human	genbank	57_37b	-1	reviewed	missense	c.254	p.A85D	1.000	superfamily_SSF53187,HMMPfam_Peptidase_M18	superfamily_SSF53187,HMMPfam_Peptidase_M18	-	no_errors	
DSPP	1834	genome.wustl.edu	37	4	88537602	88537602	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	88537602	88537602	C	T	SNP	DSPP	NM_014208	human	genbank	57_37b	+1	reviewed	missense	c.3788	p.S1263F	0.993	NULL	NULL	-	no_errors	
DSTYK	25778	genome.wustl.edu	37	1	205130512	205130512	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205130512	205130512	C	T	SNP	DSTYK	NM_015375	human	genbank	57_37b	-1	reviewed	missense	c.1822	p.E608K	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
DYRK1A	1859	genome.wustl.edu	37	21	38845021	38845021	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	38845021	38845021	C	T	SNP	DYRK1A	NM_001396	human	genbank	57_37b	+1	reviewed	missense	c.46	p.R16W	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
DYRK1A	1859	genome.wustl.edu	37	21	38853104	38853104	+	Missense_Mutation	SNP	G	G	C	rs1049775	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	38853104	38853104	G	C	SNP	DYRK1A	NM_001396	human	genbank	57_37b	+1	reviewed	missense	c.492	p.L164F	0.982	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-		
EDDM3A	0	genome.wustl.edu	37	14	21216085	21216085	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	21216085	21216085	G	A	SNP	EDDM3A	NM_006683	human	genbank	57_37b	+1	validated	missense	c.346	p.E116K	0.001	superfamily_RNaseA	superfamily_RNaseA	-	no_errors	
EIF2S2	8894	genome.wustl.edu	37	20	32685285	32685285	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	32685285	32685285	G	C	SNP	EIF2S2	NM_003908	human	genbank	57_37b	-1	reviewed	missense	c.471	p.I157M	1.000	NULL	superfamily_Translation initiation factor 2 beta aIF2beta N-terminal domain,HMMPfam_eIF-5_eIF-2B,HMMSmart_SM00653,superfamily_Zinc-binding domain of translation initiation factor 2 beta	-	no_errors	
EML2	24139	genome.wustl.edu	37	19	46116900	46116900	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	46116900	46116900	C	G	SNP	EML2	NM_012155	human	genbank	57_37b	-1	provisional	missense	c.1723	p.D575H	0.991	superfamily_Peptidase_S9A_N,HMMSmart_WD40	PatternScan_WD_REPEATS_1,HMMPfam_HELP,HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40,superfamily_Peptidase_S9A_N	-	no_errors	
ENAH	55740	genome.wustl.edu	37	1	225742783	225742783	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	225742783	225742783	G	A	SNP	ENAH	NM_001008493	human	genbank	57_37b	-1	validated	silent	c.174	p.V58	0.925	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like,HMMPfam_VASP_tetra	-	no_errors	
ENPP2	5168	genome.wustl.edu	37	8	120598503	120598503	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	120598503	120598503	G	C	SNP	ENPP2	NM_006209	human	genbank	57_37b	-1	reviewed	silent	c.1446	p.P482	1.000	superfamily_Alkaline phosphatase-like,HMMPfam_Phosphodiest	HMMSmart_SM00201,HMMPfam_Somatomedin_B,superfamily_Somatomedin B domain,PatternScan_SMB_1,superfamily_Alkaline phosphatase-like,HMMPfam_Phosphodiest,superfamily_His-Me finger endonucleases,HMMSmart_SM00477,HMMPfam_Endonuclease_NS	-	no_errors	
ENSG00000222189	0	genome.wustl.edu	37	1	156955709	156955709	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156955709	156955709	C	T	SNP	ENSG00000222189	ENST00000410257	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.010	-	-	-	no_errors	
ENSG00000234444	0	genome.wustl.edu	37	7	63797334	63797334	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	63797334	63797334	G	A	SNP	ENSG00000234444	ENST00000423484	human	ensembl	57_37b	+1	known	missense	c.200	p.R67K	0.003	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ENSG00000245239	0	genome.wustl.edu	37	10	11963139	11963139	+	RNA	SNP	T	T	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	11963139	11963139	T	G	SNP	ENSG00000245239	ENST00000499091	human	ensembl	57_37b	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	
ENSG00000245461	0	genome.wustl.edu	37	X	51488761	51488761	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	51488761	51488761	C	T	SNP	ENSG00000245461	ENST00000502175	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors	
ENSG00000247770	0	genome.wustl.edu	37	1	11184539	11184539	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	11184539	11184539	C	T	SNP	ENSG00000247770	ENST00000499978	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	
ERBB4	2066	genome.wustl.edu	37	2	212285277	212285277	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	212285277	212285277	C	T	SNP	ERBB4	NM_005235	human	genbank	57_37b	-1	reviewed	silent	c.3024	p.L1008	1.000	superfamily_Protein kinase-like (PK-like)	superfamily_L domain-like,HMMPfam_Recep_L_domain,HMMSmart_SM00261,HMMPfam_Furin-like,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_YLP	-	no_errors	
ERN2	10595	genome.wustl.edu	37	16	23702689	23702689	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	23702689	23702689	C	T	SNP	ERN2	NM_033266	human	genbank	57_37b	-1	validated	missense	c.2578	p.E860K	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Ribonuc_2-5A	superfamily_Quinoprotein alcohol dehydrogenase-like,HMMSmart_SM00564,HMMPfam_PQQ,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMPfam_Ribonuc_2-5A,HMMSmart_SM00580	-	no_errors	
ESPN	83715	genome.wustl.edu	37	1	6504709	6504709	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6504709	6504709	C	A	SNP	ESPN	NM_031475	human	genbank	57_37b	+1	reviewed	missense	c.1159	p.H387N	1.000	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMPfam_WH2,HMMSmart_SM00246	-	no_errors	
EVI5L	115704	genome.wustl.edu	37	19	7918195	7918195	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7918195	7918195	G	A	SNP	EVI5L	NM_145245	human	genbank	57_37b	+1	validated	silent	c.1122	p.E374	0.997	NULL	superfamily_RabGAP_TBC,HMMPfam_TBC,HMMSmart_TBC	-	no_errors	
EXOC5	10640	genome.wustl.edu	37	14	57696455	57696455	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	57696455	57696455	A	G	SNP	EXOC5	NM_006544	human	genbank	57_37b	-1	reviewed	silent	c.1293	p.H431	1.000	HMMPfam_Sec10	HMMPfam_Sec10	-	no_errors	
FAM126B	285172	genome.wustl.edu	37	2	201887608	201887608	+	Silent	SNP	C	C	G	rs17853917	byCluster	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	201887608	201887608	C	G	SNP	FAM126B	NM_173822	human	genbank	57_37b	-1	validated	silent	c.99	p.R33	1.000	HMMPfam_Hyccin	HMMPfam_Hyccin	-		
FAM166A	401565	genome.wustl.edu	37	9	140140154	140140154	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140140154	140140154	G	-	DEL	FAM166A	NM_001001710	human	genbank	57_37b	-1	predicted	frame_shift_del	c.208	p.Q70fs	0.035	HMMPfam_DUF2475	HMMPfam_DUF2475	(deletion:cds_exon[140140091,140140305])	no_errors	
FBXO21	23014	genome.wustl.edu	37	12	117583909	117583909	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	117583909	117583909	C	T	SNP	FBXO21	NM_033624	human	genbank	57_37b	-1	reviewed	missense	c.1870	p.E624K	0.995	NULL	superfamily_F-box domain,HMMPfam_F-box,HMMPfam_YccV-like	-	no_errors	
FMO1	2326	genome.wustl.edu	37	1	171251126	171251126	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	171251126	171251126	G	A	SNP	FMO1	NM_002021	human	genbank	57_37b	+1	reviewed	silent	c.837	p.L279	0.005	HMMPfam_FMO-like,superfamily_NAD(P)-binding Rossmann-fold domains	superfamily_FAD/NAD(P)-binding domain,HMMPfam_FMO-like,PatternScan_LIPOCALIN,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors	
FRMD4A	55691	genome.wustl.edu	37	10	13838563	13838563	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	13838563	13838563	C	A	SNP	FRMD4A	NM_018027	human	genbank	57_37b	-1	validated	missense	c.232	p.D78Y	1.000	superfamily_SSF54236,HMMSmart_B41,HMMPfam_FERM_N,PatternScan_FERM_1	superfamily_SSF54236,HMMSmart_B41,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,HMMPfam_FERM_C	-	no_errors	
FRRS1	391059	genome.wustl.edu	37	1	100174482	100174482	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	100174482	100174482	G	A	SNP	FRRS1	NM_001013660	human	genbank	57_37b	-1	validated	missense	c.1853	p.S618L	0.000	NULL	HMMPfam_Reeler,HMMPfam_DOMON,HMMSmart_DoH,HMMSmart_B561	-	no_errors	
GATA3	2625	genome.wustl.edu	37	10	8106058	8106058	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	8106058	8106058	T	A	SNP	GATA3	NM_001002295	human	genbank	57_37b	+1	reviewed	missense	c.881	p.M294K	1.000	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,HMMPfam_GATA	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors	
GDPD2	54857	genome.wustl.edu	37	X	69652507	69652507	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	69652507	69652507	C	T	SNP	GDPD2	NM_017711	human	genbank	57_37b	+1	reviewed	nonsense	c.1534	p.Q512*	0.022	NULL	superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_GDPD	-	no_errors	
GLB1	2720	genome.wustl.edu	37	3	33059951	33059951	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	33059951	33059951	C	G	SNP	GLB1	NM_000404	human	genbank	57_37b	-1	reviewed	missense	c.1336	p.A446P	0.056	NULL	HMMPfam_Glyco_hydro_35,superfamily_(Trans)glycosidases,PatternScan_GLYCOSYL_HYDROL_F35	-	no_errors	
GLT25D1	79709	genome.wustl.edu	37	19	17690311	17690311	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17690311	17690311	G	C	SNP	GLT25D1	NM_024656	human	genbank	57_37b	+1	provisional	missense	c.1287	p.Q429H	1.000	HMMPfam_Glyco_transf_25	superfamily_SSF53448,HMMPfam_Glyco_transf_25,PatternScan_ER_TARGET	-	no_errors	
GOLGA4	2803	genome.wustl.edu	37	3	37369998	37369998	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	37369998	37369998	G	A	SNP	GOLGA4	NM_002078	human	genbank	57_37b	+1	reviewed	missense	c.6031	p.E2011K	1.000	NULL	superfamily_Prefoldin,PatternScan_PHOSPHOPANTETHEINE,HMMPfam_GRIP,HMMSmart_SM00755,superfamily_GRIP domain	-	no_errors	
GPR81	27198	genome.wustl.edu	37	12	123214164	123214164	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	123214164	123214164	G	A	SNP	GPR81	NM_032554	human	genbank	57_37b	-1	validated	silent	c.723	p.L241	0.139	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
GRIK2	2898	genome.wustl.edu	37	6	102124653	102124653	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	102124653	102124653	G	A	SNP	GRIK2	NM_021956	human	genbank	57_37b	+1	reviewed	missense	c.697	p.E233K	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors	
HAAO	23498	genome.wustl.edu	37	2	42997320	42997320	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	42997320	42997320	G	A	SNP	HAAO	NM_012205	human	genbank	57_37b	-1	reviewed	silent	c.447	p.F149	1.000	HMMPfam_3-HAO,superfamily_RmlC-like cupins	HMMPfam_3-HAO,superfamily_RmlC-like cupins	-	no_errors	
HMCN1	83872	genome.wustl.edu	37	1	186014856	186014856	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	186014856	186014856	C	T	SNP	HMCN1	NM_031935	human	genbank	57_37b	+1	reviewed	missense	c.6341	p.S2114F	0.999	superfamily_Immunoglobulin,HMMSmart_SM00406,HMMPfam_I-set,HMMSmart_SM00409	superfamily_vWA-like,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00406,PatternScan_CECROPIN,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00682,HMMPfam_G2F,superfamily_GFP-like,PatternScan_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMPfam_EGF_CA,PatternScan_EGF_2	-	no_errors	
HNRNPA2B1	3181	genome.wustl.edu	37	7	26237271	26237271	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	26237271	26237271	C	G	SNP	HNRNPA2B1	NM_031243	human	genbank	57_37b	-1	reviewed	missense	c.124	p.E42Q	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
HS3ST4	9951	genome.wustl.edu	37	16	26147248	26147248	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	26147248	26147248	C	T	SNP	HS3ST4	ENST00000331351	human	ensembl	57_37b	+1	known	silent	c.1050	p.S350	0.937	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	-	no_errors	
HSPB7	27129	genome.wustl.edu	37	1	16342076	16342076	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16342076	16342076	C	T	SNP	HSPB7	NM_014424	human	genbank	57_37b	-1	validated	silent	c.512	p.*171	1.000	NULL	superfamily_HSP20-like chaperones,HMMPfam_HSP20	-	no_errors	
IDE	3416	genome.wustl.edu	37	10	94230067	94230067	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	94230067	94230067	G	C	SNP	IDE	NM_004969	human	genbank	57_37b	-1	reviewed	missense	c.2152	p.Q718E	1.000	superfamily_Metalloenz_metal-bd,HMMPfam_Peptidase_M16_C	superfamily_Metalloenz_metal-bd,HMMPfam_Peptidase_M16,PatternScan_INSULINASE,HMMPfam_Peptidase_M16_C	-	no_errors	
INPP4A	3631	genome.wustl.edu	37	2	99203969	99203969	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	99203969	99203969	G	C	SNP	INPP4A	NM_001134224	human	genbank	57_37b	+1	reviewed	missense	c.2832	p.K944N	1.000	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors	
ITGA11	22801	genome.wustl.edu	37	15	68600011	68600011	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	68600011	68600011	G	A	SNP	ITGA11	NM_001004439	human	genbank	57_37b	-1	reviewed	silent	c.3198	p.V1066	0.485	HMMPfam_Integrin_alpha2,superfamily_Integrin domains	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains	-	no_errors	
ITK	3702	genome.wustl.edu	37	5	156672782	156672782	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	156672782	156672782	C	T	SNP	ITK	NM_005546	human	genbank	57_37b	+1	reviewed	missense	c.1496	p.S499F	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00107,HMMPfam_BTK,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
KAT2B	8850	genome.wustl.edu	37	3	20161094	20161094	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	20161094	20161094	C	A	SNP	KAT2B	NM_003884	human	genbank	57_37b	+1	reviewed	silent	c.1155	p.I385	1.000	NULL	HMMPfam_PCAF_N,superfamily_Acyl_CoA_acyltransferase,HMMPfam_Acetyltransf_1,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
KDM3B	51780	genome.wustl.edu	37	5	137721882	137721882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	137721882	137721882	G	A	SNP	KDM3B	NM_016604	human	genbank	57_37b	+1	validated	missense	c.952	p.E318K	1.000	NULL	superfamily_Clavaminate synthase-like,HMMSmart_SM00558,HMMPfam_JmjC	-	no_errors	
KIAA0754	643314	genome.wustl.edu	37	1	39877483	39877483	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	39877483	39877483	G	C	SNP	KIAA0754	NM_015038	human	genbank	57_37b	+1	predicted	missense	c.1546	p.E516Q	0.933	NULL	NULL	-	no_errors	
KIAA0754	643314	genome.wustl.edu	37	1	39877816	39877816	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	39877816	39877816	G	C	SNP	KIAA0754	NM_015038	human	genbank	57_37b	+1	predicted	missense	c.1879	p.D627H	1.000	NULL	NULL	-	no_errors	
KIAA1239	57495	genome.wustl.edu	37	4	37445636	37445636	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	37445636	37445636	G	A	SNP	KIAA1239	NM_001144990	human	genbank	57_37b	+1	validated	missense	c.2026	p.E676K	1.000	NULL	superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMSmart_WD40	-	no_errors	
KIAA1432	57589	genome.wustl.edu	37	9	5762597	5762597	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	5762597	5762597	G	A	SNP	KIAA1432	NM_020829	human	genbank	57_37b	+1	validated	silent	c.1812	p.Q604	1.000	NULL	superfamily_Amine_DH_B_like,HMMPfam_RIC1	-	no_errors	
KIF3C	3797	genome.wustl.edu	37	2	26203692	26203692	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	26203692	26203692	G	T	SNP	KIF3C	NM_002254	human	genbank	57_37b	-1	validated	silent	c.1095	p.I365	0.999	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin,PatternScan_RIBOSOMAL_L2,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KPNA4	3840	genome.wustl.edu	37	3	160225904	160225904	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	160225904	160225904	C	G	SNP	KPNA4	NM_002268	human	genbank	57_37b	-1	reviewed	missense	c.1363	p.E455Q	1.000	superfamily_ARM repeat	HMMPfam_IBB,superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors	
LAG3	3902	genome.wustl.edu	37	12	6886451	6886451	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6886451	6886451	C	T	SNP	LAG3	NM_002286	human	genbank	57_37b	+1	reviewed	missense	c.1079	p.S360L	0.001	NULL	HMMSmart_IG,superfamily_SSF48726,HMMPfam_ig,HMMPfam_V-set	-	no_errors	
LARGE	9215	genome.wustl.edu	37	22	33960864	33960864	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	33960864	33960864	C	G	SNP	LARGE	NM_004737	human	genbank	57_37b	-1	reviewed	missense	c.757	p.E253Q	1.000	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_8	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_8	-	no_errors	
LGTN	1939	genome.wustl.edu	37	1	206776375	206776375	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	206776375	206776375	G	C	SNP	LGTN	NM_006893	human	genbank	57_37b	-1	reviewed	silent	c.714	p.L238	0.000	NULL	superfamily_PUA domain-like,HMMSmart_SM00359,superfamily_SWIB/MDM2 domain,superfamily_eIF1-like,HMMPfam_SUI1	-	no_errors	
LIFR	3977	genome.wustl.edu	37	5	38493737	38493737	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	38493737	38493737	G	A	SNP	LIFR	NM_001127671	human	genbank	57_37b	-1	reviewed	missense	c.2036	p.S679L	0.982	superfamily_Fibronectin type III	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_L_F2	-	no_errors	
LILRB5	10990	genome.wustl.edu	37	19	54756786	54756786	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54756786	54756786	G	T	SNP	LILRB5	NM_001081442	human	genbank	57_37b	-1	reviewed	silent	c.1422	p.L474	0.015	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
LIMA1	51474	genome.wustl.edu	37	12	50616256	50616256	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	50616256	50616256	G	C	SNP	LIMA1	NM_001113546	human	genbank	57_37b	-1	validated	missense	c.178	p.L60V	0.980	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors	
LIMCH1	22998	genome.wustl.edu	37	4	41634777	41634777	+	Missense_Mutation	SNP	G	G	C	rs4590080	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	41634777	41634777	G	C	SNP	LIMCH1	ENST00000313875	human	ensembl	57_37b	+1	known	missense	c.1613	p.C538S	0.533	NULL	HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-		
LOC100289049	0	genome.wustl.edu	37	12	72058275	72058275	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	72058275	72058275	G	A	SNP	LOC100289049	XM_002343199	human	genbank	57_37b	-1	model	silent	c.279	p.L93	1.000	NULL	NULL	-	no_errors	
LOC100289107	0	genome.wustl.edu	37	4	77082717	77082717	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	77082717	77082717	C	T	SNP	LOC100289107	XM_002342483	human	genbank	57_37b	+1	model	missense	c.23	p.S8F	0.016	NULL	NULL	-	no_errors	
LOC338651	0	genome.wustl.edu	37	11	1618885	1618885	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1618885	1618885	C	T	SNP	LOC338651	NR_021489	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.007	-	-	-	no_errors	
LOC648809	648809	genome.wustl.edu	37	15	84782452	84782452	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	84782452	84782452	G	T	SNP	LOC648809	XM_001713991	human	genbank	57_37b	+1	model	silent	c.54	p.L18	1.000	superfamily_Translation proteins	superfamily_Translation proteins	-	no_errors	
LRP12	29967	genome.wustl.edu	37	8	105503585	105503585	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	105503585	105503585	C	T	SNP	LRP12	NM_013437	human	genbank	57_37b	-1	reviewed	silent	c.1896	p.Q632	0.938	NULL	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	-	no_errors	
LRRC6	23639	genome.wustl.edu	37	8	133637540	133637540	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	133637540	133637540	G	C	SNP	LRRC6	NM_012472	human	genbank	57_37b	-1	provisional	missense	c.814	p.R272G	0.992	NULL	superfamily_Outer arm dynein light chain 1,HMMSmart_SM00365,HMMPfam_LRR_1,HMMSmart_SM00446,HMMPfam_CS	-	no_errors	
LTBP4	8425	genome.wustl.edu	37	19	41114263	41114263	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41114263	41114263	C	G	SNP	LTBP4	ENST00000308370	human	ensembl	57_37b	+1	known	missense	c.1495	p.R499G	0.000	NULL	superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,superfamily_Fibril-assoc,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,superfamily_Grow_fac_recept	-	no_errors	
LZIC	84328	genome.wustl.edu	37	1	9995660	9995660	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	9995660	9995660	C	T	SNP	LZIC	NM_032368	human	genbank	57_37b	-1	provisional	missense	c.127	p.E43K	1.000	NULL	HMMPfam_ICAT,superfamily_beta-catenin-interacting protein ICAT	-	no_errors	
MAGI2	9863	genome.wustl.edu	37	7	77789382	77789382	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77789382	77789382	G	A	SNP	MAGI2	NM_012301	human	genbank	57_37b	-1	reviewed	silent	c.2805	p.I935	1.000	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1	-	no_errors	
MAP2	4133	genome.wustl.edu	37	2	210557864	210557864	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	210557864	210557864	C	G	SNP	MAP2	NM_002374	human	genbank	57_37b	+1	reviewed	missense	c.970	p.L324V	1.000	NULL	HMMPfam_RII_binding_1,HMMPfam_MAP2_projctn,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors	
MDC1	9656	genome.wustl.edu	37	6	30671702	30671702	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30671702	30671702	G	C	SNP	MDC1	NM_014641	human	genbank	57_37b	-1	reviewed	nonsense	c.5258	p.S1753*	0.000	NULL	superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA,superfamily_BRCT domain,HMMPfam_BRCT	-	no_errors	
METTL8	79828	genome.wustl.edu	37	2	172196014	172196014	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	172196014	172196014	G	C	SNP	METTL8	ENST00000375258	human	ensembl	57_37b	-1	known	missense	c.286	p.H96D	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	-	no_errors	
MFSD6	54842	genome.wustl.edu	37	2	191301691	191301691	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	191301691	191301691	C	T	SNP	MFSD6	NM_017694	human	genbank	57_37b	+1	validated	silent	c.936	p.V312	0.103	superfamily_MFS_gen_substrate_transporter	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors	
MGA	23269	genome.wustl.edu	37	15	42052536	42052536	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	42052536	42052536	C	G	SNP	MGA	NM_001080541	human	genbank	57_37b	+1	validated	missense	c.7354	p.L2452V	0.003	NULL	superfamily_p53-like transcription factors,HMMSmart_SM00425,HMMPfam_T-box,PatternScan_TBOX_2,HMMPfam_HLH,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353	-	no_errors	
MGAT4C	25834	genome.wustl.edu	37	12	86383282	86383282	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	86383282	86383282	C	G	SNP	MGAT4C	NM_013244	human	genbank	57_37b	-1	validated	missense	c.43	p.D15H	1.000	NULL	HMMPfam_Glyco_transf_54	-	no_errors	
MON2	23041	genome.wustl.edu	37	12	62954645	62954645	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	62954645	62954645	G	C	SNP	MON2	NM_015026	human	genbank	57_37b	+1	validated	missense	c.3784	p.D1262H	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_DUF1981	-	no_errors	
MTOR	2475	genome.wustl.edu	37	1	11174872	11174872	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	11174872	11174872	C	G	SNP	MTOR	NM_004958	human	genbank	57_37b	-1	reviewed	missense	c.7162	p.E2388Q	1.000	superfamily_ARM-type_fold,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc	superfamily_ARM-type_fold,superfamily_SSF48452,HMMPfam_FAT,HMMPfam_Rapamycin_bind,superfamily_FRAP_FKBP12_bind,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	-	no_errors	
MUC12	10071	genome.wustl.edu	37	7	100635483	100635483	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100635483	100635483	C	A	SNP	MUC12	ENST00000379442	human	ensembl	57_37b	+1	known	missense	c.2068	p.Q690K	0.019	NULL	PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_SEA,HMMSmart_SEA	-	no_errors	
NEB	4703	genome.wustl.edu	37	2	152404198	152404198	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	152404198	152404198	C	T	SNP	NEB	NM_004543	human	genbank	57_37b	-1	reviewed	missense	c.15109	p.D5037N	1.000	HMMSmart_SM00227,HMMPfam_Nebulin	HMMSmart_SM00227,HMMPfam_Nebulin,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
NEDD4L	23327	genome.wustl.edu	37	18	55916155	55916155	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	55916155	55916155	G	C	SNP	NEDD4L	NM_001144967	human	genbank	57_37b	+1	validated	missense	c.229	p.E77Q	1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
NEK5	341676	genome.wustl.edu	37	13	52663415	52663415	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	52663415	52663415	G	A	SNP	NEK5	NM_199289	human	genbank	57_37b	-1	provisional	nonsense	c.1243	p.Q415*	1.000	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
NOP58	51602	genome.wustl.edu	37	2	203139857	203139857	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	203139857	203139857	C	G	SNP	NOP58	NM_015934	human	genbank	57_37b	+1	provisional	missense	c.67	p.Q23E	1.000	HMMPfam_NOP5NT	HMMPfam_NOP5NT,HMMPfam_NOSIC,superfamily_SSF89124,HMMPfam_Nop	-	no_errors	
NUF2	83540	genome.wustl.edu	37	1	163318851	163318851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	163318851	163318851	G	A	SNP	NUF2	NM_031423	human	genbank	57_37b	+1	reviewed	missense	c.1241	p.R414K	0.874	NULL	HMMPfam_Nuf2	-	no_errors	
OPALIN	93377	genome.wustl.edu	37	10	98108092	98108092	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	98108092	98108092	C	T	SNP	OPALIN	NM_033207	human	genbank	57_37b	-1	validated	missense	c.203	p.R68K	0.779	NULL	NULL	-	no_errors	
OR1L4	254973	genome.wustl.edu	37	9	125487177	125487177	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	125487177	125487177	G	A	SNP	OR1L4	NM_001005235	human	genbank	57_37b	+1	provisional	silent	c.909	p.K303	0.089	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
OR51D1	390038	genome.wustl.edu	37	11	4661785	4661785	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	4661785	4661785	C	T	SNP	OR51D1	NM_001004751	human	genbank	57_37b	+1	validated	silent	c.765	p.I255	0.898	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR7A17	26333	genome.wustl.edu	37	19	14992033	14992033	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14992033	14992033	G	A	SNP	OR7A17	NM_030901	human	genbank	57_37b	-1	provisional	silent	c.135	p.I45	0.947	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
ORM2	5005	genome.wustl.edu	37	9	117092822	117092822	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	117092822	117092822	G	C	SNP	ORM2	NM_000608	human	genbank	57_37b	+1	reviewed	missense	c.223	p.E75Q	0.001	superfamily_Lipocalins,HMMPfam_Lipocalin	superfamily_Lipocalins,HMMPfam_Lipocalin	-	no_errors	
OXCT1	5019	genome.wustl.edu	37	5	41731843	41731843	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	41731843	41731843	C	G	SNP	OXCT1	NM_000436	human	genbank	57_37b	-1	reviewed	missense	c.1551	p.Q517H	1.000	superfamily_SSF100950	superfamily_SSF100950,HMMPfam_CoA_trans,PatternScan_COA_TRANSF_1,PatternScan_COA_TRANSF_2	-	no_errors	
PCDH19	57526	genome.wustl.edu	37	X	99662072	99662072	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	99662072	99662072	G	C	SNP	PCDH19	NM_001105243	human	genbank	57_37b	-1	validated	missense	c.1524	p.I508M	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PEX11B	8799	genome.wustl.edu	37	1	145522859	145522859	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145522859	145522859	C	T	SNP	PEX11B	NM_003846	human	genbank	57_37b	+1	provisional	silent	c.720	p.L240	0.017	HMMPfam_PEX11	HMMPfam_PEX11	-	no_errors	
PHIP	55023	genome.wustl.edu	37	6	79672892	79672892	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	79672892	79672892	C	T	SNP	PHIP	NM_017934	human	genbank	57_37b	-1	validated	missense	c.3457	p.D1153N	1.000	NULL	HMMSmart_SM00320,HMMPfam_WD40,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
PHKA2	5256	genome.wustl.edu	37	X	18936866	18936866	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	18936866	18936866	G	A	SNP	PHKA2	NM_000292	human	genbank	57_37b	-1	reviewed	silent	c.2070	p.F690	1.000	HMMPfam_PHK_AB	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors	
PLAC1L	219990	genome.wustl.edu	37	11	59810970	59810970	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59810970	59810970	G	A	SNP	PLAC1L	NM_173801	human	genbank	57_37b	+1	provisional	silent	c.93	p.L31	0.102	NULL	NULL	-	no_errors	
POLH	5429	genome.wustl.edu	37	6	43550143	43550143	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43550143	43550143	G	C	SNP	POLH	NM_006502	human	genbank	57_37b	+1	reviewed	missense	c.87	p.L29F	1.000	superfamily_DNA/RNA polymerases,HMMPfam_IMS	superfamily_DNA/RNA polymerases,HMMPfam_IMS	-	no_errors	
PQBP1	10084	genome.wustl.edu	37	X	48759632	48759632	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48759632	48759632	G	A	SNP	PQBP1	NM_001032381	human	genbank	57_37b	+1	reviewed	missense	c.415	p.D139N	0.994	NULL	superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW	-	no_errors	
PRAMEF4	400735	genome.wustl.edu	37	1	12939611	12939611	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	12939611	12939611	C	T	SNP	PRAMEF4	NM_001009611	human	genbank	57_37b	-1	validated	silent	c.1191	p.L397	0.001	superfamily_SSF52047	superfamily_SSF52047	-	no_errors	
PRAMEF4	400735	genome.wustl.edu	37	1	12943161	12943161	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	12943161	12943161	G	T	SNP	PRAMEF4	NM_001009611	human	genbank	57_37b	-1	validated	missense	c.55	p.L19M	0.074	superfamily_SSF52047	superfamily_SSF52047	-	no_errors	
PREX1	57580	genome.wustl.edu	37	20	47267491	47267491	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	47267491	47267491	G	-	DEL	PREX1	NM_020820	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.2758	p.R920fs	0.994	NULL	"superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00049,HMMPfam_DEP,superfamily_PDZ domain-like,HMMSmart_SM00228"	(deletion:cds_exon[47267432,47267593])	no_errors	
PROK1	84432	genome.wustl.edu	37	1	110998922	110998922	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	110998922	110998922	C	T	SNP	PROK1	NM_032414	human	genbank	57_37b	+1	validated	silent	c.267	p.F89	0.042	HMMPfam_Prokineticin,superfamily_SSF57190	HMMPfam_Prokineticin,superfamily_SSF57190	-	no_errors	
PROM1	8842	genome.wustl.edu	37	4	16010727	16010727	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	16010727	16010727	G	C	SNP	PROM1	NM_006017	human	genbank	57_37b	-1	reviewed	missense	c.1146	p.I382M	0.956	HMMPfam_Prominin	HMMPfam_Prominin	-	no_errors	
PRR21	0	genome.wustl.edu	37	2	240982327	240982327	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	240982327	240982327	G	C	SNP	PRR21	NM_001080835	human	genbank	57_37b	-1	provisional	missense	c.73	p.Q25E	0.004	NULL	NULL	-	no_errors	
PSMC6	5706	genome.wustl.edu	37	14	53177881	53177881	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	53177881	53177881	C	T	SNP	PSMC6	NM_002806	human	genbank	57_37b	+1	reviewed	silent	c.363	p.I121	0.998	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
PTEN	5728	genome.wustl.edu	37	10	89712018	89712018	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	89712018	89712018	T	C	SNP	PTEN	ENST00000371953	human	ensembl	57_37b	+1	known	splice_site	c.634+2	e6+2	1.000	-	-	-	no_errors	
PTPRF	5792	genome.wustl.edu	37	1	44079330	44079330	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	44079330	44079330	G	A	SNP	PTPRF	NM_002840	human	genbank	57_37b	+1	reviewed	missense	c.4015	p.D1339N	1.000	superfamily_(Phosphotyrosine protein) phosphatases II	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
PTPRF	5792	genome.wustl.edu	37	1	44087660	44087660	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	44087660	44087660	C	A	SNP	PTPRF	NM_002840	human	genbank	57_37b	+1	reviewed	missense	c.5710	p.H1904N	1.000	NULL	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,PatternScan_TYR_PHOSPHATASE_1,superfamily_Immunoglobulin,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors	
PTPRH	5794	genome.wustl.edu	37	19	55715306	55715306	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55715306	55715306	G	A	SNP	PTPRH	NM_002842	human	genbank	57_37b	-1	validated	nonsense	c.730	p.Q244*	0.177	superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	HMMPfam_fn3,superfamily_Fibronectin type III,HMMSmart_SM00060,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
RASAL3	64926	genome.wustl.edu	37	19	15575074	15575074	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	15575074	15575074	C	A	SNP	RASAL3	NM_022904	human	genbank	57_37b	-1	validated	missense	c.96	p.E32D	0.912	NULL	superfamily_PH domain-like,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2,HMMSmart_SM00323,superfamily_GTPase activation domain GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1	-	no_errors	
RENBP	5973	genome.wustl.edu	37	X	153206997	153206997	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153206997	153206997	G	-	DEL	RENBP	NM_002910	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.879	p.G294fs	0.025	superfamily_Six-hairpin glycosidases,HMMPfam_GlcNAc_2-epim	superfamily_Six-hairpin glycosidases,HMMPfam_GlcNAc_2-epim	(deletion:cds_exon[153206931,153207106])	no_errors	
RGS20	8601	genome.wustl.edu	37	8	54852243	54852243	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	54852243	54852243	C	T	SNP	RGS20	NM_170587	human	genbank	57_37b	+1	validated	silent	c.618	p.N206	0.272	NULL	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315	-	no_errors	
RGS4	5999	genome.wustl.edu	37	1	163043290	163043290	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	163043290	163043290	G	A	SNP	RGS4	NM_001102445	human	genbank	57_37b	+1	reviewed	missense	c.547	p.E183K	1.000	superfamily_Regulat_G_prot_signal_superfam,HMMPfam_RGS,HMMSmart_RGS	superfamily_Regulat_G_prot_signal_superfam,HMMPfam_RGS,HMMSmart_RGS	-	no_errors	
RIPK1	8737	genome.wustl.edu	37	6	3085612	3085612	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	3085612	3085612	G	T	SNP	RIPK1	NM_003804	human	genbank	57_37b	+1	validated	missense	c.808	p.A270S	0.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors	
RLF	6018	genome.wustl.edu	37	1	40705986	40705986	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	40705986	40705986	G	A	SNP	RLF	NM_012421	human	genbank	57_37b	+1	validated	missense	c.5612	p.C1871Y	1.000	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,superfamily_SSF57667	-	no_errors	
RNASEN	29102	genome.wustl.edu	37	5	31401613	31401613	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	31401613	31401613	C	G	SNP	RNASEN	NM_013235	human	genbank	57_37b	-1	validated	missense	c.4051	p.E1351Q	1.000	NULL	superfamily_RNase III catalytic domain-like (Pfam 00636),HMMSmart_SM00535,PatternScan_RNASE_3_1,HMMPfam_Ribonuclease_3,superfamily_dsRNA-binding domain-like,HMMPfam_dsrm,HMMSmart_SM00358	-	no_errors	
RPTN	126638	genome.wustl.edu	37	1	152129019	152129019	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152129019	152129019	C	G	SNP	RPTN	NM_001122965	human	genbank	57_37b	-1	validated	missense	c.556	p.E186Q	0.714	NULL	superfamily_EF-hand,HMMPfam_S_100,HMMPfam_efhand,PatternScan_S100_CABP,PatternScan_EF_HAND_1	-	no_errors	
RTP4	64108	genome.wustl.edu	37	3	187088789	187088789	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	187088789	187088789	G	A	SNP	RTP4	NM_022147	human	genbank	57_37b	+1	validated	silent	c.369	p.L123	0.012	NULL	NULL	-	no_errors	
RUNX1	861	genome.wustl.edu	37	21	36252856	36252857	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	36252856	36252857	-	T	INS	RUNX1	NM_001754	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.506_505	p.R169fs	1.000:0.998	HMMPfam_Runt,superfamily_p53-like transcription factors	HMMPfam_Runt,superfamily_p53-like transcription factors,HMMPfam_RunxI	-	no_errors	
SCN11A	11280	genome.wustl.edu	37	3	38968358	38968358	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38968358	38968358	G	C	SNP	SCN11A	NM_014139	human	genbank	57_37b	-1	validated	missense	c.553	p.L185V	0.575	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc	-	no_errors	
SCN4A	6329	genome.wustl.edu	37	17	62041972	62041972	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	62041972	62041972	G	C	SNP	SCN4A	NM_000334	human	genbank	57_37b	-1	reviewed	missense	c.1308	p.F436L	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMPfam_IQ	-	no_errors	
SF3B1	23451	genome.wustl.edu	37	2	198267361	198267361	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	198267361	198267361	T	C	SNP	SF3B1	NM_012433	human	genbank	57_37b	-1	reviewed	missense	c.1996	p.K666E	1.000	superfamily_ARM repeat	HMMPfam_SF3b1,superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
SFRS12	140890	genome.wustl.edu	37	5	65474672	65474672	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	65474672	65474672	C	T	SNP	SFRS12	NM_001077199	human	genbank	57_37b	+1	validated	silent	c.1851	p.L617	0.858	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors	
SHISA9	0	genome.wustl.edu	37	16	13010601	13010601	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	13010601	13010601	G	A	SNP	SHISA9	NM_001145204	human	genbank	57_37b	+1	validated	missense	c.743	p.R248K	1.000	NULL	NULL	-	no_errors	
SIK3	23387	genome.wustl.edu	37	11	116798097	116798097	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	116798097	116798097	C	A	SNP	SIK3	NM_025164	human	genbank	57_37b	-1	validated	splice_site	c.281-1	e4-1	1.000	-	-	-	no_errors	
SLAIN1	122060	genome.wustl.edu	37	13	78327410	78327410	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	78327410	78327410	C	T	SNP	SLAIN1	NM_001040153	human	genbank	57_37b	+1	validated	missense	c.608	p.S203F	0.997	NULL	NULL	-	no_errors	
SLC13A3	64849	genome.wustl.edu	37	20	45188729	45188729	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	45188729	45188729	C	T	SNP	SLC13A3	NM_022829	human	genbank	57_37b	-1	reviewed	missense	c.1741	p.D581N	0.000	NULL	HMMPfam_Na_sulph_symp	-	no_errors	
SLC22A16	85413	genome.wustl.edu	37	6	110763662	110763662	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	110763662	110763662	G	A	SNP	SLC22A16	NM_033125	human	genbank	57_37b	-1	provisional	missense	c.968	p.S323L	0.906	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	-	no_errors	
SLC30A5	64924	genome.wustl.edu	37	5	68419174	68419174	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	68419174	68419174	G	A	SNP	SLC30A5	NM_022902	human	genbank	57_37b	+1	provisional	silent	c.1920	p.L640	1.000	HMMPfam_Cation_efflux	HMMPfam_Cation_efflux	-	no_errors	
SMARCC1	6599	genome.wustl.edu	37	3	47680259	47680259	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47680259	47680259	C	G	SNP	SMARCC1	NM_003074	human	genbank	57_37b	-1	validated	missense	c.2332	p.E778Q	1.000	NULL	superfamily_BRCT,HMMSmart_CHROMO,HMMPfam_SWIRM,superfamily_Homeodomain_like,HMMSmart_SANT,HMMPfam_Myb_DNA-binding	-	no_errors	
SMC5	23137	genome.wustl.edu	37	9	72913049	72913049	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	72913049	72913049	G	C	SNP	SMC5	NM_015110	human	genbank	57_37b	+1	validated	silent	c.1221	p.L407	0.999	HMMPfam_SMC_N,superfamily_SSF52540	HMMPfam_SMC_N,superfamily_SSF52540	-	no_errors	
SNCB	6620	genome.wustl.edu	37	5	176048277	176048277	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176048277	176048277	C	T	SNP	SNCB	NM_001001502	human	genbank	57_37b	-1	reviewed	missense	c.310	p.E104K	1.000	HMMPfam_Synuclein	HMMPfam_Synuclein	-	no_errors	
SPEG	10290	genome.wustl.edu	37	2	220338317	220338317	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	220338317	220338317	C	G	SNP	SPEG	NM_005876	human	genbank	57_37b	+1	validated	missense	c.4239	p.F1413L	1.000	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00219	-	no_errors	
SPEN	23013	genome.wustl.edu	37	1	16257914	16257914	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16257914	16257914	C	T	SNP	SPEN	NM_015001	human	genbank	57_37b	+1	reviewed	nonsense	c.5179	p.Q1727*	0.015	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1,superfamily_SPOC-like,HMMPfam_SPOC	-	no_errors	
SPRYD5	84767	genome.wustl.edu	37	11	55653691	55653691	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55653691	55653691	G	A	SNP	SPRYD5	NM_032681	human	genbank	57_37b	+1	validated	nonsense	c.504	p.W168*	0.117	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY	-	no_errors	
SREBF2	6721	genome.wustl.edu	37	22	42293122	42293122	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	42293122	42293122	G	A	SNP	SREBF2	NM_004599	human	genbank	57_37b	+1	reviewed	missense	c.2562	p.M854I	0.006	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	-	no_errors	
SRL	6345	genome.wustl.edu	37	16	4247856	4247856	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4247856	4247856	G	T	SNP	SRL	NM_001098814	human	genbank	57_37b	-1	validated	missense	c.320	p.S107Y	1.000	superfamily_SSF52540	superfamily_SSF52540	-	no_errors	
STAB1	23166	genome.wustl.edu	37	3	52547786	52547786	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52547786	52547786	C	T	SNP	STAB1	NM_015136	human	genbank	57_37b	+1	reviewed	silent	c.3324	p.N1108	0.471	superfamily_FAS1 domain,HMMPfam_Fasciclin,HMMSmart_SM00554	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,HMMSmart_SM00180,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_FAS1 domain,HMMSmart_SM00554,HMMPfam_Fasciclin,PatternScan_CYTOCHROME_P450,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_LAM_1,HMMPfam_Laminin_EGF,superfamily_Growth factor receptor domain,HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	-	no_errors	
STOX2	56977	genome.wustl.edu	37	4	184932148	184932148	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	184932148	184932148	G	C	SNP	STOX2	NM_020225	human	genbank	57_37b	+1	provisional	silent	c.2157	p.S719	0.000	NULL	HMMPfam_Stork_head	-	no_errors	
SUSD4	55061	genome.wustl.edu	37	1	223402560	223402560	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	223402560	223402560	G	C	SNP	SUSD4	NM_017982	human	genbank	57_37b	-1	validated	missense	c.895	p.Q299E	0.997	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
TAF1	6872	genome.wustl.edu	37	X	70607298	70607298	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70607298	70607298	G	A	SNP	TAF1	NM_004606	human	genbank	57_37b	+1	reviewed	missense	c.2474	p.R825Q	1.000	NULL	HMMPfam_TBP-binding,superfamily_TAF_II_230,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
TAP1	6890	genome.wustl.edu	37	6	32816574	32816574	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32816574	32816574	G	T	SNP	TAP1	NM_000593	human	genbank	57_37b	-1	reviewed	missense	c.1601	p.S534Y	1.000	superfamily_ABC_TM_1	superfamily_ABC_TM_1,HMMPfam_ABC_membrane,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
TCEA1	6917	genome.wustl.edu	37	8	54897032	54897032	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	54897032	54897032	C	G	SNP	TCEA1	NM_006756	human	genbank	57_37b	-1	validated	missense	c.569	p.R190T	1.000	superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510	superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70,HMMPfam_TFIIS,HMMSmart_SM00509,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,superfamily_Zinc beta-ribbon,HMMPfam_TFIIS_C,HMMSmart_SM00440,PatternScan_ZF_TFIIS_1	-	no_errors	
TFDP2	7029	genome.wustl.edu	37	3	141671859	141671859	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	141671859	141671859	C	G	SNP	TFDP2	NM_006286	human	genbank	57_37b	-1	provisional	splice_site	c.872-1	e9-1	1.000	-	-	-	no_errors	
THSD7A	221981	genome.wustl.edu	37	7	11676040	11676040	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	11676040	11676040	C	T	SNP	THSD7A	NM_015204	human	genbank	57_37b	-1	validated	missense	c.739	p.E247K	0.606	HMMSmart_SM00209	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	-	no_errors	
TLL2	7093	genome.wustl.edu	37	10	98205902	98205902	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	98205902	98205902	C	G	SNP	TLL2	NM_012465	human	genbank	57_37b	-1	reviewed	missense	c.310	p.E104Q	0.038	NULL	PatternScan_EGF_1,superfamily_SSF55486,HMMSmart_ZnMc,HMMPfam_Astacin,PatternScan_ZINC_PROTEASE,superfamily_CUB,HMMPfam_CUB,HMMSmart_CUB,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF_CA,superfamily_SSF57196,PatternScan_EGF_2,HMMPfam_EGF	-	no_errors	
TMEM132D	121256	genome.wustl.edu	37	12	130015639	130015639	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	130015639	130015639	G	A	SNP	TMEM132D	NM_133448	human	genbank	57_37b	-1	validated	silent	c.1080	p.I360	0.030	NULL	NULL	-	no_errors	
TMEM155	132332	genome.wustl.edu	37	4	122682808	122682808	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	122682808	122682808	G	A	SNP	TMEM155	NM_152399	human	genbank	57_37b	-1	validated	silent	c.97	p.L33	0.090	NULL	NULL	-	no_errors	
TNIP1	10318	genome.wustl.edu	37	5	150439923	150439923	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	150439923	150439923	C	T	SNP	TNIP1	NM_006058	human	genbank	57_37b	-1	validated	missense	c.391	p.E131K	0.992	NULL	NULL	-	no_errors	
TRIP12	9320	genome.wustl.edu	37	2	230678948	230678948	+	Splice_Site	DEL	C	C	-	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	230678948	230678948	C	-	DEL	TRIP12	NM_004238	human	genbank	57_37b	-1	provisional	splice_site_del	c.1680+1	e10+1	1.000	-	-	(deletion:intron[230678748,230678948])	no_errors	
TRMT6	51605	genome.wustl.edu	37	20	5921753	5921753	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	5921753	5921753	C	T	SNP	TRMT6	NM_015939	human	genbank	57_37b	-1	reviewed	silent	c.1248	p.E416	0.997	NULL	HMMPfam_Gcd10p	-	no_errors	
TRPM8	79054	genome.wustl.edu	37	2	234878931	234878931	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234878931	234878931	C	T	SNP	TRPM8	NM_024080	human	genbank	57_37b	+1	validated	missense	c.2216	p.S739F	1.000	NULL	HMMPfam_Ion_trans	-	no_errors	
TSHZ2	128553	genome.wustl.edu	37	20	51872856	51872856	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	51872856	51872856	G	A	SNP	TSHZ2	NM_173485	human	genbank	57_37b	+1	validated	missense	c.2859	p.M953I	1.000	NULL	PatternScan_HOMEOBOX_1,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_HOX,HMMPfam_Homeobox,HMMPfam_zf-C2H2	-	no_errors	
TSHZ3	57616	genome.wustl.edu	37	19	31768347	31768347	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	31768347	31768347	G	C	SNP	TSHZ3	NM_020856	human	genbank	57_37b	-1	validated	silent	c.2352	p.V784	0.965	NULL	PatternScan_HOMEOBOX_1,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	-	no_errors	
TTC26	79989	genome.wustl.edu	37	7	138865859	138865859	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	138865859	138865859	G	C	SNP	TTC26	NM_024926	human	genbank	57_37b	+1	validated	missense	c.1334	p.R445T	1.000	superfamily_SSF48452	superfamily_SSF48452	-	no_errors	
TTLL9	164395	genome.wustl.edu	37	20	30486275	30486275	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30486275	30486275	G	A	SNP	TTLL9	NM_001008409	human	genbank	57_37b	+1	provisional	splice_site	c.114-1	e3-1	1.000	-	-	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179497091	179497091	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179497091	179497091	C	G	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.35826	p.E11942D	0.996	HMMPfam_I-set,HMMSmart_SM00409	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TUBD1	51174	genome.wustl.edu	37	17	57968254	57968254	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	57968254	57968254	C	G	SNP	TUBD1	NM_016261	human	genbank	57_37b	-1	validated	missense	c.110	p.R37T	0.988	superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin	superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin,PatternScan_TUBULIN,superfamily_Tubulin C-terminal domain-like	-	no_errors	
UPP2	151531	genome.wustl.edu	37	2	158991285	158991285	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	158991285	158991285	C	G	SNP	UPP2	NM_001135098	human	genbank	57_37b	+1	validated	silent	c.1008	p.L336	0.004	superfamily_Purine and uridine phosphorylases,HMMPfam_PNP_UDP_1	superfamily_Purine and uridine phosphorylases,HMMPfam_PNP_UDP_1,PatternScan_PNP_UDP_1	-	no_errors	
USH2A	7399	genome.wustl.edu	37	1	216061968	216061968	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	216061968	216061968	G	C	SNP	USH2A	NM_206933	human	genbank	57_37b	-1	reviewed	missense	c.8023	p.L2675V	0.991	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00560,HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors	
UTP20	27340	genome.wustl.edu	37	12	101776918	101776918	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	101776918	101776918	G	A	SNP	UTP20	NM_014503	human	genbank	57_37b	+1	validated	missense	c.7756	p.E2586K	0.005	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_DRIM	-	no_errors	
VAV3	10451	genome.wustl.edu	37	1	108303488	108303488	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	108303488	108303488	C	G	SNP	VAV3	NM_006113	human	genbank	57_37b	-1	reviewed	missense	c.935	p.R312T	1.000	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325	HMMPfam_CH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00033,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,HMMPfam_SH3_1	-	no_errors	
WDFY3	23001	genome.wustl.edu	37	4	85638146	85638146	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	85638146	85638146	C	G	SNP	WDFY3	NM_014991	human	genbank	57_37b	-1	reviewed	missense	c.7778	p.R2593T	0.993	superfamily_PH domain-like	superfamily_ARM repeat,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cyclin-like,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors	
WNK3	65267	genome.wustl.edu	37	X	54319370	54319370	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54319370	54319370	G	A	SNP	WNK3	NM_020922	human	genbank	57_37b	-1	validated	missense	c.1988	p.S663L	0.954	superfamily_Kinase_like	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
WWP2	11060	genome.wustl.edu	37	16	69973789	69973789	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	69973789	69973789	G	C	SNP	WWP2	NM_007014	human	genbank	57_37b	+1	reviewed	silent	c.2559	p.L853	0.995	superfamily_HECT,HMMSmart_HECTc,HMMPfam_HECT	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_HECT,HMMSmart_HECTc,HMMPfam_HECT	-	no_errors	
XPOT	11260	genome.wustl.edu	37	12	64814203	64814203	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	64814203	64814203	G	C	SNP	XPOT	NM_007235	human	genbank	57_37b	+1	reviewed	missense	c.745	p.E249Q	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_Xpo1	-	no_errors	
YEATS2	55689	genome.wustl.edu	37	3	183432996	183432996	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183432996	183432996	G	A	SNP	YEATS2	NM_018023	human	genbank	57_37b	+1	validated	missense	c.46	p.E16K	1.000	NULL	HMMPfam_YEATS	-	no_errors	
ZBTB10	65986	genome.wustl.edu	37	8	81412521	81412521	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	81412521	81412521	C	G	SNP	ZBTB10	NM_001105539	human	genbank	57_37b	+1	validated	missense	c.1765	p.P589A	1.000	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZFHX3	463	genome.wustl.edu	37	16	72830257	72830257	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	72830257	72830257	C	T	SNP	ZFHX3	NM_006885	human	genbank	57_37b	-1	reviewed	silent	c.6324	p.Q2108	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,HMMSmart_SM00451,HMMSmart_SM00389,superfamily_Homeodomain-like,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
ZHX1	11244	genome.wustl.edu	37	8	124266322	124266322	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	124266322	124266322	G	C	SNP	ZHX1	NM_001017926	human	genbank	57_37b	-1	reviewed	nonsense	c.1865	p.S622*	0.638	superfamily_Homeodomain_like,HMMSmart_HOX	PatternScan_ZINC_FINGER_C2H2_1,PatternScan_HOMEOBOX_1,HMMSmart_ZnF_C2H2,HMMSmart_HOX,superfamily_Homeodomain_like,HMMPfam_Homeobox	-	no_errors	
ZNF28	7576	genome.wustl.edu	37	19	53303801	53303801	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53303801	53303801	G	A	SNP	ZNF28	NM_006969	human	genbank	57_37b	-1	validated	missense	c.1138	p.H380Y	0.982	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF283	284349	genome.wustl.edu	37	19	44351927	44351927	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	44351927	44351927	C	T	SNP	ZNF283	NM_181845	human	genbank	57_37b	+1	validated	nonsense	c.1174	p.R392*	0.025	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF385B	151126	genome.wustl.edu	37	2	180634302	180634302	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	180634302	180634302	G	A	SNP	ZNF385B	NM_152520	human	genbank	57_37b	-1	validated	nonsense	c.181	p.R61*	0.985	HMMSmart_SM00451	HMMSmart_SM00451,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF638	27332	genome.wustl.edu	37	2	71576606	71576606	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	71576606	71576606	G	C	SNP	ZNF638	NM_001014972	human	genbank	57_37b	+1	reviewed	missense	c.522	p.L174F	0.998	NULL	HMMSmart_SM00451,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
ZNF83	55769	genome.wustl.edu	37	19	53116808	53116808	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53116808	53116808	C	T	SNP	ZNF83	NM_001105549	human	genbank	57_37b	-1	validated	missense	c.1010	p.R337K	0.035	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNHIT6	54680	genome.wustl.edu	37	1	86144457	86144457	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HP-01A-12D-A099-09	TCGA-BH-A0HP-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	86144457	86144457	C	A	SNP	ZNHIT6	NM_017953	human	genbank	57_37b	-1	validated	missense	c.1096	p.D366Y	1.000	NULL	HMMPfam_zf-HIT	-	no_errors	
