Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCD3	5825	genome.wustl.edu	37	1	94946144	94946144	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	94946144	94946144	C	T	SNP	ABCD3	NM_002858	human	genbank	57_37b	+1	reviewed	missense	c.809	p.S270F	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane_2	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane_2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACAD11	84129	genome.wustl.edu	37	3	132277859	132277859	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	132277859	132277859	T	C	SNP	ACAD11	NM_032169	human	genbank	57_37b	-1	validated	missense	c.2299	p.M767V	0.226	HMMPfam_Acyl-CoA_dh_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like	superfamily_Protein kinase-like (PK-like),HMMPfam_APH,PatternScan_PROTEIN_KINASE_TYR,superfamily_Acyl-CoA dehydrogenase NM domain-like,HMMPfam_Acyl-CoA_dh_N,HMMPfam_Acyl-CoA_dh_M,HMMPfam_Acyl-CoA_dh_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like	-	no_errors	
ACAP1	9744	genome.wustl.edu	37	17	7251307	7251307	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7251307	7251307	G	A	SNP	ACAP1	NM_014716	human	genbank	57_37b	+1	validated	silent	c.1410	p.V470	0.999	superfamily_ArfGAP,HMMPfam_ArfGap,HMMSmart_ArfGap	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_ArfGAP,HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors	
AGAP1	116987	genome.wustl.edu	37	2	236715952	236715952	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	236715952	236715952	G	A	SNP	AGAP1	NM_001037131	human	genbank	57_37b	+1	validated	missense	c.1027	p.G343S	1.000	superfamily_PH domain-like	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Miro,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors	
ANGPTL1	9068	genome.wustl.edu	37	1	178834294	178834294	+	Silent	SNP	T	T	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	178834294	178834294	T	G	SNP	ANGPTL1	NM_004673	human	genbank	57_37b	-1	reviewed	silent	c.618	p.R206	0.999	NULL	superfamily_Fibrinogen_a/b/g_C,HMMSmart_FBG,HMMPfam_Fibrinogen_C,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors	
ANGPTL1	9068	genome.wustl.edu	37	1	178834752	178834752	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	178834752	178834752	G	C	SNP	ANGPTL1	NM_004673	human	genbank	57_37b	-1	reviewed	missense	c.160	p.L54V	0.916	NULL	HMMPfam_Fibrinogen_C,HMMSmart_FBG,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen_a/b/g_C	-	no_errors	
ARSA	410	genome.wustl.edu	37	22	51064659	51064659	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	51064659	51064659	C	T	SNP	ARSA	NM_000487	human	genbank	57_37b	-1	reviewed	missense	c.896	p.R299Q	0.980	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core,PatternScan_SULFATASE_1,PatternScan_SULFATASE_2	-	no_errors	
ATG16L1	55054	genome.wustl.edu	37	2	234164823	234164823	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234164823	234164823	C	T	SNP	ATG16L1	NM_030803	human	genbank	57_37b	+1	validated	missense	c.191	p.P64L	1.000	HMMPfam_ATG16	HMMPfam_ATG16,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
ATP8B2	57198	genome.wustl.edu	37	1	154313476	154313476	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154313476	154313476	C	T	SNP	ATP8B2	NM_020452	human	genbank	57_37b	+1	reviewed	missense	c.1280	p.T427M	1.000	superfamily_SSF81665,superfamily_SSF56784,PatternScan_ATPASE_E1_E2	superfamily_SSF81665,superfamily_SSF81653,HMMPfam_E1-E2_ATPase,superfamily_SSF56784,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Hydrolase_3	-	no_errors	
BANK1	55024	genome.wustl.edu	37	4	102951292	102951292	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	102951292	102951292	G	A	SNP	BANK1	NM_017935	human	genbank	57_37b	+1	reviewed	missense	c.1770	p.M590I	0.000	NULL	superfamily_Ankyrin repeat	-	no_errors	
BAT2L1	0	genome.wustl.edu	37	9	134319670	134319670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	134319670	134319670	G	A	SNP	BAT2L1	NM_013318	human	genbank	57_37b	+1	validated	missense	c.568	p.V190I	1.000	HMMPfam_BAT2_N	HMMPfam_BAT2_N	-	no_errors	
C10orf12	26148	genome.wustl.edu	37	10	98742267	98742267	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	98742267	98742267	G	A	SNP	C10orf12	NM_015652	human	genbank	57_37b	+1	predicted	missense	c.1120	p.D374N	0.097	NULL	NULL	-	no_errors	
C5orf42	65250	genome.wustl.edu	37	5	37169245	37169245	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	37169245	37169245	C	G	SNP	C5orf42	NM_023073	human	genbank	57_37b	-1	predicted	missense	c.3521	p.R1174T	0.000	NULL	NULL	-	no_errors	
CD83	9308	genome.wustl.edu	37	6	14131848	14131848	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	14131848	14131848	C	T	SNP	CD83	NM_004233	human	genbank	57_37b	+1	validated	missense	c.251	p.A84V	0.001	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig	-	no_errors	
CLCN3	1182	genome.wustl.edu	37	4	170628037	170628037	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	170628037	170628037	C	T	SNP	CLCN3	NM_173872	human	genbank	57_37b	+1	validated	missense	c.1769	p.T590I	1.000	superfamily_Cl-channel_core,HMMPfam_Voltage_CLC	superfamily_Cl-channel_core,HMMPfam_Voltage_CLC,HMMPfam_CBS,HMMSmart_CBS,superfamily_SSF54631	-	no_errors	
COBL	23242	genome.wustl.edu	37	7	51093013	51093013	+	Silent	SNP	A	A	T	rs2240087	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	51093013	51093013	A	T	SNP	COBL	NM_015198	human	genbank	57_37b	-1	validated	silent	c.3561	p.A1187	0.000	NULL	HMMPfam_Cobl,HMMPfam_WH2,HMMSmart_SM00246	-		
DAGLA	747	genome.wustl.edu	37	11	61508016	61508016	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61508016	61508016	C	G	SNP	DAGLA	NM_006133	human	genbank	57_37b	+1	validated	silent	c.1935	p.A645	1.000	NULL	superfamily_SSF53474,HMMPfam_Lipase_3,PatternScan_LIPASE_SER	-	no_errors	
DHRS4	10901	genome.wustl.edu	37	14	24424404	24424404	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24424404	24424404	G	A	SNP	DHRS4	NM_021004	human	genbank	57_37b	+1	validated	missense	c.289	p.E97K	0.994	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short,PatternScan_ADH_SHORT	-	no_errors	
ENSG00000214754	0	genome.wustl.edu	37	7	47093148	47093148	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	47093148	47093148	G	T	SNP	ENSG00000214754	ENST00000442518	human	ensembl	57_37b	+1	known	missense	c.1526	p.R509L	0.993	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
ENSG00000228637	0	genome.wustl.edu	37	10	42392701	42392701	+	RNA	SNP	C	C	G	rs4124039	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	42392701	42392701	C	G	SNP	ENSG00000228637	ENST00000439345	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.000	-	-	-		
ENSG00000245859	0	genome.wustl.edu	37	5	176910532	176910532	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176910532	176910532	G	A	SNP	ENSG00000245859	ENST00000499364	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.005	-	-	-	no_errors	
EPHA1	2041	genome.wustl.edu	37	7	143104718	143104718	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	143104718	143104718	G	A	SNP	EPHA1	NM_005232	human	genbank	57_37b	-1	reviewed	missense	c.136	p.P46S	0.997	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors	
FLG	2312	genome.wustl.edu	37	1	152286754	152286754	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152286754	152286754	C	G	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	missense	c.608	p.R203T	0.000	NULL	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors	
FRYL	285527	genome.wustl.edu	37	4	48584566	48584566	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	48584566	48584566	A	C	SNP	FRYL	NM_015030	human	genbank	57_37b	-1	validated	missense	c.1934	p.I645R	1.000	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors	
FUT9	10690	genome.wustl.edu	37	6	96651553	96651553	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	96651553	96651553	C	T	SNP	FUT9	NM_006581	human	genbank	57_37b	+1	validated	silent	c.522	p.S174	1.000	HMMPfam_Glyco_transf_10	HMMPfam_Glyco_transf_10	-	no_errors	
GDI1	2664	genome.wustl.edu	37	X	153668757	153668757	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153668757	153668757	G	A	SNP	GDI1	NM_001493	human	genbank	57_37b	+1	reviewed	missense	c.623	p.R208H	1.000	superfamily_FAD/NAD(P)-binding domain,HMMPfam_GDI	superfamily_FAD/NAD(P)-binding domain,HMMPfam_GDI	-	no_errors	
GH2	2689	genome.wustl.edu	37	17	61958446	61958446	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61958446	61958446	G	C	SNP	GH2	NM_022557	human	genbank	57_37b	-1	reviewed	silent	c.234	p.L78	0.991	HMMPfam_Hormone_1,superfamily_4-helical cytokines	HMMPfam_Hormone_1,superfamily_4-helical cytokines,PatternScan_SOMATOTROPIN_1	-	no_errors	
HIST1H2AK	8330	genome.wustl.edu	37	6	27805754	27805754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	27805754	27805754	C	T	SNP	HIST1H2AK	NM_003510	human	genbank	57_37b	-1	reviewed	missense	c.364	p.E122K	1.000	superfamily_Histone-fold,HMMSmart_SM00414	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone,PatternScan_HISTONE_H2A	-	no_errors	
IMMT	10989	genome.wustl.edu	37	2	86397875	86397875	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	86397875	86397875	C	G	SNP	IMMT	NM_006839	human	genbank	57_37b	-1	validated	missense	c.652	p.E218Q	0.870	HMMPfam_Mitofilin	HMMPfam_Mitofilin	-	no_errors	
ITGA9	3680	genome.wustl.edu	37	3	37778398	37778398	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	37778398	37778398	G	A	SNP	ITGA9	NM_002207	human	genbank	57_37b	+1	reviewed	missense	c.2158	p.E720K	1.000	HMMPfam_Integrin_alpha2,superfamily_SSF69179	superfamily_SSF69318,HMMSmart_Int_alpha,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_SSF69179,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors	
KRT17	3872	genome.wustl.edu	37	17	39777865	39777865	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39777865	39777865	C	T	SNP	KRT17	NM_000422	human	genbank	57_37b	-1	reviewed	missense	c.814	p.E272K	0.997	HMMPfam_Filament,superfamily_Prefoldin	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-	no_errors	
METTL2B	55798	genome.wustl.edu	37	7	128141820	128141820	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	128141820	128141820	A	G	SNP	METTL2B	NM_018396	human	genbank	57_37b	+1	reviewed	silent	c.987	p.E329	0.938	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	-	no_errors	
MKL1	57591	genome.wustl.edu	37	22	40807871	40807871	+	Silent	SNP	C	C	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	40807871	40807871	C	A	SNP	MKL1	NM_020831	human	genbank	57_37b	-1	validated	silent	c.2319	p.G773	0.028	NULL	HMMSmart_RPEL,superfamily_SSF68906,HMMPfam_SAP,HMMSmart_SAP	-	no_errors	
MPV17L	255027	genome.wustl.edu	37	16	15501892	15501892	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15501892	15501892	G	C	SNP	MPV17L	NM_001128423	human	genbank	57_37b	+1	validated	missense	c.514	p.D172H	0.994	NULL	HMMPfam_Mpv17_PMP22	-	no_errors	
MX1	4599	genome.wustl.edu	37	21	42807920	42807920	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	42807920	42807920	G	C	SNP	MX1	NM_001144925	human	genbank	57_37b	+1	reviewed	missense	c.262	p.E88Q	1.000	HMMSmart_DYNc,superfamily_SSF52540,HMMPfam_Dynamin_N	HMMSmart_DYNc,superfamily_SSF52540,HMMPfam_Dynamin_N,PatternScan_DYNAMIN,HMMPfam_Dynamin_M,HMMPfam_GED,HMMSmart_GED	-	no_errors	
MYCBP2	23077	genome.wustl.edu	37	13	77817214	77817214	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	77817214	77817214	T	C	SNP	MYCBP2	NM_015057	human	genbank	57_37b	-1	validated	missense	c.2495	p.H832R	1.000	superfamily_RCC1/BLIP-II	superfamily_RCC1/BLIP-II,PatternScan_RCC1_2,HMMPfam_RCC1,HMMPfam_PHR,superfamily_E set domains,superfamily_Galactose-binding domain-like,superfamily_RING/U-box,HMMSmart_SM00184	-	no_errors	
NUP98	4928	genome.wustl.edu	37	11	3700873	3700873	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	3700873	3700873	G	A	SNP	NUP98	NM_016320	human	genbank	57_37b	-1	reviewed	missense	c.4984	p.R1662C	1.000	NULL	superfamily_SSF88633,HMMPfam_Nucleoporin2,superfamily_Peptidase_S59	-	no_errors	
PAPD5	64282	genome.wustl.edu	37	16	50259141	50259141	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	50259141	50259141	C	G	SNP	PAPD5	NM_001040284	human	genbank	57_37b	+1	validated	missense	c.1073	p.S358C	1.000	NULL	superfamily_Nucleotidyltransferase,HMMPfam_NTP_transf_2,superfamily_PAP/OAS1 substrate-binding domain,HMMPfam_PAP_assoc	-	no_errors	
PCDHB10	56126	genome.wustl.edu	37	5	140572714	140572714	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140572714	140572714	G	A	SNP	PCDHB10	NM_018930	human	genbank	57_37b	+1	reviewed	missense	c.589	p.D197N	0.992	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_CA	-	no_errors	
PIK3R1	5295	genome.wustl.edu	37	5	67591127	67591129	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	67591127	67591129	AGA	-	DEL	PIK3R1	NM_181523	human	genbank	57_37b	+1	reviewed	in_frame_del	c.1720_1722	p.R574in_frame_del	1.000:1.000:1.000	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	(deletion:cds_exon[67590976,67591152])	no_errors	
PLA2G4F	255189	genome.wustl.edu	37	15	42436738	42436738	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	42436738	42436738	G	A	SNP	PLA2G4F	NM_213600	human	genbank	57_37b	-1	validated	missense	c.1885	p.R629C	1.000	HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like,HMMPfam_PLA2_B	-	no_errors	
PUM2	23369	genome.wustl.edu	37	2	20511409	20511409	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	20511409	20511409	C	T	SNP	PUM2	NM_015317	human	genbank	57_37b	-1	provisional	missense	c.364	p.E122K	1.000	NULL	superfamily_ARM repeat,HMMPfam_PUF,HMMSmart_SM00025	-	no_errors	
RBMXL3	139804	genome.wustl.edu	37	X	114425988	114425988	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114425988	114425988	T	C	SNP	RBMXL3	NM_001145346	human	genbank	57_37b	+1	provisional	missense	c.1984	p.C662R	0.004	NULL	HMMSmart_RRM,superfamily_SSF54928,HMMPfam_RRM_1	-	no_errors	
RGS22	26166	genome.wustl.edu	37	8	100994227	100994227	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	100994227	100994227	G	A	SNP	RGS22	NM_015668	human	genbank	57_37b	-1	validated	nonsense	c.3298	p.Q1100*	1.000	superfamily_Regulator of G-protein signaling RGS,HMMSmart_SM00315,HMMPfam_RGS	superfamily_Regulator of G-protein signaling RGS,HMMSmart_SM00315,HMMPfam_RGS	-	no_errors	
RYR3	6263	genome.wustl.edu	37	15	33954810	33954810	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	33954810	33954810	G	A	SNP	RYR3	NM_001036	human	genbank	57_37b	+1	validated	silent	c.5079	p.T1693	0.223	NULL	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,HMMPfam_efhand,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors	
STAT2	6773	genome.wustl.edu	37	12	56748596	56748596	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56748596	56748596	T	C	SNP	STAT2	NM_005419	human	genbank	57_37b	-1	reviewed	missense	c.599	p.Q200R	0.998	superfamily_STAT,HMMPfam_STAT_alpha	superfamily_Transcription factor STAT-4 N-domain,HMMPfam_STAT_int,superfamily_STAT,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_p53-like transcription factors,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7574002	7574002	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7574002	7574002	C	G	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.1025	p.R342P	0.071	HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TRIP10	9322	genome.wustl.edu	37	19	6751165	6751166	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6751165	6751166	-	A	INS	TRIP10	NM_004240	human	genbank	57_37b	+1	validated	frame_shift_ins	c.1581_1582	p.E528fs	1.000:1.000	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	HMMPfam_FCH,HMMSmart_SM00055,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
WDFY4	0	genome.wustl.edu	37	10	49943941	49943941	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	49943941	49943941	C	T	SNP	WDFY4	NM_020945	human	genbank	57_37b	+1	validated	silent	c.1704	p.H568	0.491	superfamily_ARM repeat	superfamily_ARM repeat,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
ZMYM3	9203	genome.wustl.edu	37	X	70472831	70472831	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A12Z-01A-11D-A10Y-09	TCGA-C8-A12Z-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70472831	70472831	G	A	SNP	ZMYM3	NM_005096	human	genbank	57_37b	-1	reviewed	missense	c.275	p.P92L	0.999	NULL	HMMPfam_zf-FCS,HMMSmart_SM00746	-	no_errors	
