Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AARS	16	genome.wustl.edu	37	16	70295012	70295012	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70295012	70295012	G	A	SNP	AARS	NM_001605	human	genbank	57_37b	-1	reviewed	silent	c.1720	p.L574	1.000	HMMPfam_tRNA-synt_2c	superfamily_SSF55681,HMMPfam_tRNA-synt_2c,superfamily_Ala-tRNA-synth_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,HMMPfam_tRNA_SAD,HMMPfam_DHHA1	-	no_errors	
ACTN2	88	genome.wustl.edu	37	1	236902735	236902735	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236902735	236902735	A	-	DEL	ACTN2	NM_001103	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1010	p.E337fs	1.000	superfamily_Spectrin repeat,HMMPfam_Spectrin	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,HMMPfam_efhand_Ca_insen	(deletion:cds_exon[236902602,236902832])	no_errors	
ADAMTS19	171019	genome.wustl.edu	37	5	129040021	129040021	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	129040021	129040021	G	T	SNP	ADAMTS19	NM_133638	human	genbank	57_37b	+1	reviewed	missense	c.3231	p.R1077S	1.000	superfamily_TSP-1 type 1 repeat,HMMPfam_TSP_1,HMMSmart_SM00209	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_PLAC"	-	no_errors	
ADAMTSL2	9719	genome.wustl.edu	37	9	136412259	136412259	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	136412259	136412259	G	A	SNP	ADAMTSL2	NM_001145320	human	genbank	57_37b	+1	reviewed	missense	c.863	p.R288Q	1.000	HMMPfam_ADAM_spacer1	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,HMMPfam_PLAC	-	no_errors	
AKAP6	9472	genome.wustl.edu	37	14	33291628	33291628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	33291628	33291628	G	A	SNP	AKAP6	NM_004274	human	genbank	57_37b	+1	reviewed	missense	c.4609	p.D1537N	1.000	NULL	HMMSmart_SM00150,superfamily_Spectrin repeat,PatternScan_PFKB_KINASES_2	-	no_errors	
AMDHD1	144193	genome.wustl.edu	37	12	96360231	96360231	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	96360231	96360231	C	A	SNP	AMDHD1	NM_152435	human	genbank	57_37b	+1	validated	missense	c.1138	p.H380N	1.000	superfamily_Composite domain of metallo-dependent hydrolases,HMMPfam_Amidohydro_1	superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases,HMMPfam_Amidohydro_1	-	no_errors	
ARNT2	9915	genome.wustl.edu	37	15	80750279	80750279	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	80750279	80750279	C	T	SNP	ARNT2	NM_014862	human	genbank	57_37b	+1	reviewed	silent	c.156	p.F52	0.725	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353,HMMSmart_SM00091,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS_3,HMMSmart_SM00086	-	no_errors	
BAHCC1	57597	genome.wustl.edu	37	17	79429821	79429821	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79429821	79429821	G	A	SNP	BAHCC1	ENST00000436173	human	ensembl	57_37b	+1	known	missense	c.7439	p.G2480D	1.000	NULL	HMMPfam_BAH,HMMSmart_SM00439	-	no_errors	
C2orf55	343990	genome.wustl.edu	37	2	99443462	99443462	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	99443462	99443462	C	T	SNP	C2orf55	NM_207362	human	genbank	57_37b	-1	validated	silent	c.711	p.S237	0.506	NULL	NULL	-	no_errors	
CACNA1G	8913	genome.wustl.edu	37	17	48646591	48646591	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	48646591	48646591	C	G	SNP	CACNA1G	NM_018896	human	genbank	57_37b	+1	validated	silent	c.420	p.G140	0.925	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors	
CENPE	1062	genome.wustl.edu	37	4	104115811	104115811	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	104115811	104115811	C	T	SNP	CENPE	NM_001813	human	genbank	57_37b	-1	validated	missense	c.508	p.E170K	1.000	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,PatternScan_AA_TRNA_LIGASE_I	-	no_errors	
CEP170	9859	genome.wustl.edu	37	1	243329334	243329334	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	243329334	243329334	C	T	SNP	CEP170	NM_014812	human	genbank	57_37b	-1	reviewed	missense	c.1928	p.R643Q	1.000	NULL	superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA	-	no_errors	
CHCHD9	645345	genome.wustl.edu	37	9	82006647	82006647	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	82006647	82006647	G	A	SNP	CHCHD9	ENST00000338392	human	ensembl	57_37b	+1	known	silent	c.429	p.Q143	1.000	HMMPfam_CHCH	HMMPfam_CHCH	-	no_errors	
DCAF4L2	138009	genome.wustl.edu	37	8	88885659	88885659	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	88885659	88885659	G	T	SNP	DCAF4L2	NM_152418	human	genbank	57_37b	-1	validated	missense	c.541	p.Q181K	1.000	superfamily_WD40_like	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
DOCK11	139818	genome.wustl.edu	37	X	117699984	117699984	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	117699984	117699984	G	A	SNP	DOCK11	NM_144658	human	genbank	57_37b	+1	validated	missense	c.710	p.R237H	1.000	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_Ded_cyto	-	no_errors	
DOCK9	23348	genome.wustl.edu	37	13	99575591	99575591	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	99575591	99575591	C	T	SNP	DOCK9	NM_001130049	human	genbank	57_37b	-1	validated	missense	c.454	p.V152I	1.000	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
DPYSL5	56896	genome.wustl.edu	37	2	27169788	27169788	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27169788	27169788	C	T	SNP	DPYSL5	NM_020134	human	genbank	57_37b	+1	validated	silent	c.1620	p.I540	0.987	NULL	superfamily_Metalo_hydrolase,HMMPfam_Amidohydro_1,superfamily_SSF51556	-	no_errors	
F5	2153	genome.wustl.edu	37	1	169541460	169541460	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169541460	169541460	T	G	SNP	F5	NM_000130	human	genbank	57_37b	-1	reviewed	missense	c.372	p.E124D	1.000	superfamily_Cupredoxins	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3,PatternScan_MULTICOPPER_OXIDASE1,HMMPfam_LSPR,superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2	-	no_errors	
FAM131A	131408	genome.wustl.edu	37	3	184055444	184055444	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	184055444	184055444	A	G	SNP	FAM131A	ENST00000383847	human	ensembl	57_37b	+1	known	missense	c.26	p.K9R	1.000	NULL	NULL	-	no_errors	
FOSL2	2355	genome.wustl.edu	37	2	28627062	28627062	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	28627062	28627062	T	G	SNP	FOSL2	NM_005253	human	genbank	57_37b	+1	reviewed	missense	c.191	p.V64G	1.000	NULL	HMMSmart_SM00338,HMMPfam_bZIP_2,PatternScan_BZIP_BASIC	-	no_errors	
GPSM1	26086	genome.wustl.edu	37	9	139231983	139231983	+	Silent	SNP	T	T	C	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139231983	139231983	T	C	SNP	GPSM1	NM_001145638	human	genbank	57_37b	+1	validated	silent	c.664	p.L222	1.000	superfamily_TPR-like,HMMPfam_TPR_1,HMMSmart_SM00028	superfamily_TPR-like,HMMPfam_TPR_1,HMMSmart_SM00028,HMMPfam_TPR_2,HMMPfam_GoLoco,HMMSmart_SM00390	-	no_errors	
GRPEL2	134266	genome.wustl.edu	37	5	148730599	148730599	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	148730599	148730599	C	-	DEL	GRPEL2	NM_152407	human	genbank	57_37b	+1	validated	frame_shift_del	c.432	p.R145fs	0.999	HMMPfam_GrpE	HMMPfam_GrpE,superfamily_GrpE_head,PatternScan_GRPE	(deletion:cds_exon[148730481,148730845])	no_errors	
HAAO	23498	genome.wustl.edu	37	2	42997323	42997323	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	42997323	42997323	G	A	SNP	HAAO	NM_012205	human	genbank	57_37b	-1	reviewed	silent	c.444	p.F148	1.000	HMMPfam_3-HAO,superfamily_RmlC-like cupins	HMMPfam_3-HAO,superfamily_RmlC-like cupins	-	no_errors	
HAUS7	55559	genome.wustl.edu	37	X	152722094	152722094	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	152722094	152722094	G	A	SNP	HAUS7	NM_017518	human	genbank	57_37b	-1	reviewed	silent	c.492	p.F164	0.000	NULL	NULL	-	no_errors	
IRX4	50805	genome.wustl.edu	37	5	1878883	1878884	+	In_Frame_Ins	INS	-	-	TTT	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	1878883	1878884	-	TTT	INS	IRX4	NM_016358	human	genbank	57_37b	-1	validated	in_frame_ins	c.760_759	p.253in_frame_insK	1.000:1.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMSmart_SM00548	-	no_errors	
KDM4DL	0	genome.wustl.edu	37	11	94759830	94759830	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	94759830	94759830	G	T	SNP	KDM4DL	ENST00000450979	human	ensembl	57_37b	+1	known	missense	c.1109	p.G370V	0.032	NULL	HMMPfam_JmjN,HMMSmart_JmjC,HMMPfam_JmjC	-	no_errors	
KLHL23	151230	genome.wustl.edu	37	2	170592266	170592266	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	170592266	170592266	A	C	SNP	KLHL23	NM_144711	human	genbank	57_37b	+1	validated	missense	c.742	p.T248P	0.595	superfamily_Gal_oxid_central	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_oxid_central,HMMSmart_Kelch,HMMPfam_Kelch_1	-	no_errors	
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	25398284	25398284	C	A	SNP	KRAS	NM_033360	human	genbank	57_37b	-1	reviewed	missense	c.35	p.G12V	1.000	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174,HMMSmart_SM00176	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174,HMMSmart_SM00176	-	no_errors	
MYH7	4625	genome.wustl.edu	37	14	23894523	23894523	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23894523	23894523	G	-	DEL	MYH7	NM_000257	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.2391	p.R798fs	0.693	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00015,HMMPfam_IQ	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	(deletion:cds_exon[23894491,23894627])	no_errors	
MYO3A	53904	genome.wustl.edu	37	10	26243835	26243835	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	26243835	26243835	C	T	SNP	MYO3A	NM_017433	human	genbank	57_37b	+1	reviewed	silent	c.201	p.N67	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ	-	no_errors	
NOP2	4839	genome.wustl.edu	37	12	6670928	6670928	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6670928	6670928	C	T	SNP	NOP2	NM_001033714	human	genbank	57_37b	-1	validated	missense	c.1097	p.G366E	1.000	superfamily_SSF53335,HMMPfam_Nol1_Nop2_Fmu	superfamily_SSF53335,HMMPfam_Nol1_Nop2_Fmu,PatternScan_NOL1_NOP2_SUN,HMMPfam_P120R	-	no_errors	
NR4A1	3164	genome.wustl.edu	37	12	52451283	52451283	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	52451283	52451283	C	T	SNP	NR4A1	NM_002135	human	genbank	57_37b	+1	reviewed	silent	c.1509	p.F503	0.991	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
NTHL1	4913	genome.wustl.edu	37	16	2090176	2090176	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2090176	2090176	G	A	SNP	NTHL1	NM_002528	human	genbank	57_37b	-1	reviewed	missense	c.773	p.S258F	0.869	superfamily_DNA_glycsylse,HMMPfam_HhH-GPD,HMMSmart_ENDO3c	PatternScan_ENDONUCLEASE_III_1,superfamily_DNA_glycsylse,HMMPfam_HhH-GPD,HMMSmart_ENDO3c,HMMPfam_HHH,PatternScan_ENDONUCLEASE_III_2,HMMSmart_FES	-	no_errors	
OSMR	9180	genome.wustl.edu	37	5	38904586	38904586	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	38904586	38904586	C	A	SNP	OSMR	NM_003999	human	genbank	57_37b	+1	reviewed	missense	c.1266	p.N422K	0.000	superfamily_Fibronectin type III	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_L_F2	-	no_errors	
PARP15	165631	genome.wustl.edu	37	3	122345796	122345796	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	122345796	122345796	C	A	SNP	PARP15	NM_001113523	human	genbank	57_37b	+1	validated	missense	c.1354	p.L452M	0.008	superfamily_Macro domain-like	superfamily_Macro domain-like,HMMSmart_SM00506,HMMPfam_Macro,superfamily_ADP-ribosylation,HMMPfam_PARP	-	no_errors	
PCDHB12	56124	genome.wustl.edu	37	5	140589610	140589610	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140589610	140589610	C	G	SNP	PCDHB12	NM_018932	human	genbank	57_37b	+1	reviewed	missense	c.1131	p.D377E	0.049	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCSK7	9159	genome.wustl.edu	37	11	117089867	117089867	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	117089867	117089867	C	A	SNP	PCSK7	NM_004716	human	genbank	57_37b	-1	reviewed	missense	c.1337	p.R446L	0.006	superfamily_Pept_S8_S53,HMMPfam_Peptidase_S8	PatternScan_SUBTILASE_ASP,superfamily_Pept_S8_S53,HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Gal_bind_like,HMMPfam_P_proprotein	-	no_errors	
PDCD11	22984	genome.wustl.edu	37	10	105179384	105179384	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105179384	105179384	C	T	SNP	PDCD11	NM_014976	human	genbank	57_37b	+1	validated	silent	c.2196	p.L732	0.971	superfamily_Nucleic_acid_OB,HMMPfam_S1,HMMSmart_S1	superfamily_Nucleic_acid_OB,HMMSmart_S1,HMMPfam_S1,superfamily_SSF48452,HMMSmart_HAT	-	no_errors	
PGBD5	79605	genome.wustl.edu	37	1	230503869	230503869	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	230503869	230503869	G	T	SNP	PGBD5	NM_024554	human	genbank	57_37b	-1	reviewed	missense	c.146	p.S49Y	0.000	NULL	NULL	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PIK3CA	5290	genome.wustl.edu	37	3	178916936	178916936	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178916936	178916936	G	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.323	p.R108H	1.000	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PNPLA6	10908	genome.wustl.edu	37	19	7601348	7601348	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7601348	7601348	C	T	SNP	PNPLA6	NM_006702	human	genbank	57_37b	+1	reviewed	missense	c.212	p.T71I	1.000	NULL	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,superfamily_Acyl_Trfase/lysoPlipase,HMMPfam_Patatin,PatternScan_UPF0028	-	no_errors	
PTPRD	5789	genome.wustl.edu	37	9	8317921	8317921	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	8317921	8317921	G	A	SNP	PTPRD	NM_002839	human	genbank	57_37b	-1	reviewed	missense	c.5692	p.R1898C	1.000	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
QSOX1	5768	genome.wustl.edu	37	1	180151338	180151338	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	180151338	180151338	C	T	SNP	QSOX1	NM_002826	human	genbank	57_37b	+1	reviewed	silent	c.636	p.G212	0.019	NULL	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin,superfamily_FAD-dependent thiol oxidase,HMMPfam_Evr1_Alr	-	no_errors	
RCBTB1	55213	genome.wustl.edu	37	13	50134175	50134175	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	50134175	50134175	C	A	SNP	RCBTB1	NM_018191	human	genbank	57_37b	-1	reviewed	missense	c.323	p.G108V	1.000	superfamily_RCC1/BLIP-II,HMMPfam_RCC1	PatternScan_RCC1_1,superfamily_RCC1/BLIP-II,HMMPfam_RCC1,PatternScan_RCC1_2,superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB	-	no_errors	
RYR1	6261	genome.wustl.edu	37	19	38951038	38951038	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38951038	38951038	G	A	SNP	RYR1	NM_000540	human	genbank	57_37b	+1	reviewed	missense	c.2384	p.R795H	1.000	HMMPfam_SPRY,HMMSmart_SM00449	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors	
SSX2IP	117178	genome.wustl.edu	37	1	85135415	85135415	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	85135415	85135415	C	A	SNP	SSX2IP	NM_014021	human	genbank	57_37b	-1	reviewed	missense	c.375	p.L125F	1.000	NULL	NULL	-	no_errors	
STXBP1	6812	genome.wustl.edu	37	9	130430385	130430385	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	130430385	130430385	C	T	SNP	STXBP1	NM_003165	human	genbank	57_37b	+1	reviewed	missense	c.821	p.A274V	0.797	superfamily_Sec1/munc18-like (SM) proteins,HMMPfam_Sec1	superfamily_Sec1/munc18-like (SM) proteins,HMMPfam_Sec1	-	no_errors	
SUPT6H	6830	genome.wustl.edu	37	17	27001584	27001584	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27001584	27001584	G	A	SNP	SUPT6H	NM_003170	human	genbank	57_37b	+1	validated	missense	c.298	p.D100N	1.000	NULL	HMMPfam_Tex_N,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMSmart_SM00316,HMMPfam_S1,superfamily_SH2 domain,HMMSmart_SM00252	-	no_errors	
SYPL2	284612	genome.wustl.edu	37	1	110018244	110018244	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	110018244	110018244	C	T	SNP	SYPL2	NM_001040709	human	genbank	57_37b	+1	validated	silent	c.171	p.S57	0.971	HMMPfam_MARVEL	HMMPfam_MARVEL	-	no_errors	
TAS2R31	0	genome.wustl.edu	37	12	11183883	11183883	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	11183883	11183883	C	G	SNP	TAS2R31	NM_176885	human	genbank	57_37b	-1	provisional	missense	c.52	p.V18L	0.001	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	-	no_errors	
TBX3	6926	genome.wustl.edu	37	12	115118711	115118711	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	115118711	115118711	G	-	DEL	TBX3	NM_016569	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.630	p.N211fs	1.000	superfamily_p53-like transcription factors,HMMSmart_SM00425,HMMPfam_T-box	superfamily_p53-like transcription factors,HMMSmart_SM00425,HMMPfam_T-box,PatternScan_TBOX_1,PatternScan_TBOX_2	(deletion:cds_exon[115118684,115118951])	no_errors	
TEP1	7011	genome.wustl.edu	37	14	20873630	20873630	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20873630	20873630	C	A	SNP	TEP1	NM_007110	human	genbank	57_37b	-1	reviewed	nonsense	c.850	p.E284*	0.999	HMMPfam_TROVE	HMMPfam_TEP1_N,HMMPfam_TROVE,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T	rs28934578	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578406	7578406	C	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.524	p.R175H	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-		
UNC5CL	222643	genome.wustl.edu	37	6	41000851	41000851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	41000851	41000851	G	A	SNP	UNC5CL	NM_173561	human	genbank	57_37b	-1	provisional	missense	c.721	p.R241C	0.028	NULL	HMMPfam_ZU5,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors	
WDR54	84058	genome.wustl.edu	37	2	74651009	74651009	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74651009	74651009	T	C	SNP	WDR54	NM_032118	human	genbank	57_37b	+1	provisional	missense	c.434	p.F145S	1.000	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
ZIC4	84107	genome.wustl.edu	37	3	147113686	147113686	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	147113686	147113686	A	G	SNP	ZIC4	ENST00000383075	human	ensembl	57_37b	-1	known	missense	c.641	p.V214A	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF211	10520	genome.wustl.edu	37	19	58153270	58153270	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58153270	58153270	G	A	SNP	ZNF211	NM_006385	human	genbank	57_37b	+1	validated	silent	c.1455	p.Q485	0.013	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF812	729648	genome.wustl.edu	37	19	9800857	9800857	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A131-01A-11D-A10Y-09	TCGA-C8-A131-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9800857	9800857	C	T	SNP	ZNF812	XM_001726949	human	genbank	57_37b	-1	model	missense	c.1103	p.G368E	0.974	superfamily_C2H2 and C2HC zinc fingers	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
