Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABAT	18	genome.wustl.edu	37	16	8862091	8862091	+	Silent	SNP	C	C	T	rs1139522	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	8862091	8862091	C	T	SNP	ABAT	NM_000663	human	genbank	57_37b	+1	reviewed	silent	c.645	p.G215	0.975	superfamily_PyrdxlP-dep_Trfase_major,HMMPfam_Aminotran_3	superfamily_PyrdxlP-dep_Trfase_major,HMMPfam_Aminotran_3,PatternScan_AA_TRANSFER_CLASS_3	-		
ABCA7	10347	genome.wustl.edu	37	19	1045173	1045173	+	Missense_Mutation	SNP	G	G	A	rs3752233	byCluster;byFrequency;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1045173	1045173	G	A	SNP	ABCA7	NM_019112	human	genbank	57_37b	+1	reviewed	missense	c.1388	p.R463H	0.008	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-		
ABCB11	8647	genome.wustl.edu	37	2	169826581	169826581	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	169826581	169826581	C	A	SNP	ABCB11	NM_003742	human	genbank	57_37b	-1	reviewed	missense	c.1783	p.A595S	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACTR8	93973	genome.wustl.edu	37	3	53908256	53908256	+	Silent	SNP	A	A	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	53908256	53908256	A	C	SNP	ACTR8	NM_022899	human	genbank	57_37b	-1	validated	silent	c.1047	p.T349	0.645	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067	superfamily_SSF53067,HMMPfam_Actin,HMMSmart_ACTIN	-	no_errors	
ADAMTS1	9510	genome.wustl.edu	37	21	28216595	28216595	+	Missense_Mutation	SNP	C	G	G	rs428785	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	28216595	28216595	C	G	SNP	ADAMTS1	NM_006988	human	genbank	57_37b	-1	reviewed	missense	c.679	p.A227P	0.000	NULL	PatternScan_DISINTEGRIN_1,HMMPfam_Pep_M12B_propep,superfamily_SSF55486,HMMPfam_Reprolysin,PatternScan_ZINC_PROTEASE,HMMSmart_ACR,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1	-		
AHNAK2	113146	genome.wustl.edu	37	14	105417688	105417688	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105417688	105417688	A	G	SNP	AHNAK2	NM_138420	human	genbank	57_37b	-1	validated	missense	c.4100	p.M1367T	0.001	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_Involucrin	-	no_errors	
APOH	350	genome.wustl.edu	37	17	64219815	64219815	+	Splice_Site	SNP	C	C	T	rs113148457	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	64219815	64219815	C	T	SNP	APOH	NM_000042	human	genbank	57_37b	-1	reviewed	splice_site	c.415+1	e4+1	1.000	-	-	-		
ARPC1B	10095	genome.wustl.edu	37	7	98988555	98988555	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	98988555	98988555	G	A	SNP	ARPC1B	NM_005720	human	genbank	57_37b	+1	reviewed	silent	c.540	p.P180	0.033	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
ASTL	431705	genome.wustl.edu	37	2	96789787	96789787	+	Silent	SNP	T	T	C	rs893173	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	96789787	96789787	T	C	SNP	ASTL	NM_001002036	human	genbank	57_37b	-1	validated	silent	c.1098	p.L366	0.000	NULL	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMSmart_SM00235,HMMPfam_Astacin"	-		
ATP6V0A2	23545	genome.wustl.edu	37	12	124241429	124241429	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124241429	124241429	C	T	SNP	ATP6V0A2	NM_012463	human	genbank	57_37b	+1	reviewed	silent	c.2361	p.V787	0.945	HMMPfam_V_ATPase_I	HMMPfam_V_ATPase_I	-	no_errors	
AWAT1	158833	genome.wustl.edu	37	X	69456923	69456923	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	69456923	69456923	G	C	SNP	AWAT1	NM_001013579	human	genbank	57_37b	+1	reviewed	missense	c.285	p.E95D	0.881	HMMPfam_DAGAT	HMMPfam_DAGAT	-	no_errors	
C16orf38	0	genome.wustl.edu	37	16	1536323	1536323	+	Silent	SNP	A	A	G	rs2667671	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1536323	1536323	A	G	SNP	C16orf38	NM_001013658	human	genbank	57_37b	-1	provisional	silent	c.1039	p.L347	0.357	HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Pentaxin	HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Pentaxin	-		
C3orf19	51244	genome.wustl.edu	37	3	14708387	14708387	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	14708387	14708387	G	A	SNP	C3orf19	NM_016474	human	genbank	57_37b	+1	validated	silent	c.657	p.E219	0.958	NULL	NULL	-	no_errors	
C7orf27	221927	genome.wustl.edu	37	7	2577781	2577781	+	Silent	SNP	T	T	C	rs1043291	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	2577781	2577781	T	C	SNP	C7orf27	NM_152743	human	genbank	57_37b	-1	provisional	silent	c.2388	p.E796	0.958	NULL	superfamily_ARM repeat,HMMPfam_HEAT	-		
CACNA1B	774	genome.wustl.edu	37	9	140901245	140901245	+	Silent	SNP	A	A	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140901245	140901245	A	T	SNP	CACNA1B	NM_000718	human	genbank	57_37b	+1	validated	silent	c.2001	p.A667	0.069	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CDH12	1010	genome.wustl.edu	37	5	21752184	21752184	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	21752184	21752184	C	A	SNP	CDH12	NM_004061	human	genbank	57_37b	-1	reviewed	missense	c.2047	p.V683L	1.000	HMMPfam_Cadherin_C	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CDK19	0	genome.wustl.edu	37	6	110942402	110942402	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	110942402	110942402	C	G	SNP	CDK19	NM_015076	human	genbank	57_37b	-1	reviewed	missense	c.1282	p.D428H	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
CPAMD8	27151	genome.wustl.edu	37	19	17008578	17008578	+	Missense_Mutation	SNP	G	C	C	rs2608732	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17008578	17008578	G	C	SNP	CPAMD8	ENST00000443236	human	ensembl	57_37b	-1	known	missense	c.5162	p.P1721R	1.000	superfamily_Alpha-macroglobulin receptor domain	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep,superfamily_Kazal-type serine protease inhibitors,HMMSmart_SM00280,HMMPfam_Kazal_1	-		
CYP4F11	57834	genome.wustl.edu	37	19	16035659	16035659	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	16035659	16035659	C	T	SNP	CYP4F11	NM_001128932	human	genbank	57_37b	-1	reviewed	missense	c.559	p.A187T	0.000	superfamily_Cytochrome P450,HMMPfam_p450	superfamily_Cytochrome P450,HMMPfam_p450,PatternScan_CYTOCHROME_P450	-	no_errors	
DEPDC4	120863	genome.wustl.edu	37	12	100660730	100660730	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	100660730	100660730	C	G	SNP	DEPDC4	NM_152317	human	genbank	57_37b	-1	provisional	missense	c.125	p.R42P	0.000	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049"	-	no_errors	
DPPA2	151871	genome.wustl.edu	37	3	109027096	109027096	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	109027096	109027096	C	G	SNP	DPPA2	NM_138815	human	genbank	57_37b	-1	validated	silent	c.441	p.S147	0.000	NULL	HMMSmart_SAP	-	no_errors	
ENSG00000196758	0	genome.wustl.edu	37	2	240500438	240500438	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	240500438	240500438	G	A	SNP	ENSG00000196758	ENST00000358775	human	ensembl	57_37b	+1	known	missense	c.319	p.V107I	0.003	NULL	NULL	-	no_errors	
ENTPD1	953	genome.wustl.edu	37	10	97602252	97602252	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	97602252	97602252	G	A	SNP	ENTPD1	NM_001776	human	genbank	57_37b	+1	validated	splice_site	c.413+1	e4+1	1.000	-	-	-	no_errors	
ETF1	2107	genome.wustl.edu	37	5	137844062	137844062	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	137844062	137844062	G	A	SNP	ETF1	NM_004730	human	genbank	57_37b	-1	validated	nonsense	c.1246	p.R416*	1.000	superfamily_L30e-like,HMMPfam_eRF1_3	superfamily_N-terminal domain of eukaryotic peptide chain release factor subunit 1 ERF1,HMMPfam_eRF1_1,superfamily_Translational machinery components,HMMPfam_eRF1_2,superfamily_L30e-like,HMMPfam_eRF1_3	-	no_errors	
FAM21A	387680	genome.wustl.edu	37	10	51827934	51827934	+	Missense_Mutation	SNP	G	A	A	rs55875820	byCluster	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	51827934	51827934	G	A	SNP	FAM21A	NM_001005751	human	genbank	57_37b	+1	validated	missense	c.73	p.V25M	1.000	NULL	NULL	-		
FAM58A	92002	genome.wustl.edu	37	X	152860089	152860089	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	152860089	152860089	C	T	SNP	FAM58A	ENST00000276345	human	ensembl	57_37b	-1	known	nonsense	c.339	p.W113*	1.000	HMMSmart_CYCLIN,superfamily_Cyclin_like	HMMSmart_CYCLIN,superfamily_Cyclin_like	-	no_errors	
FDPS	2224	genome.wustl.edu	37	1	155290277	155290277	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155290277	155290277	G	A	SNP	FDPS	NM_001135821	human	genbank	57_37b	+1	reviewed	silent	c.1137	p.V379	0.001	superfamily_Terpenoid_synth,HMMPfam_polyprenyl_synt	superfamily_Terpenoid_synth,HMMPfam_polyprenyl_synt,PatternScan_POLYPRENYL_SYNTHET_1,PatternScan_POLYPRENYL_SYNTHET_2	-	no_errors	
FGD5	152273	genome.wustl.edu	37	3	14862067	14862067	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	14862067	14862067	G	A	SNP	FGD5	NM_152536	human	genbank	57_37b	+1	validated	missense	c.1489	p.V497I	1.000	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger,PatternScan_C_TYPE_LECTIN_1	-	no_errors	
FGFR1	2260	genome.wustl.edu	37	8	38275446	38275446	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	38275446	38275446	G	A	SNP	FGFR1	NM_023110	human	genbank	57_37b	-1	reviewed	silent	c.1494	p.I498	0.060	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
FRMPD4	9758	genome.wustl.edu	37	X	12704307	12704307	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	12704307	12704307	G	T	SNP	FRMPD4	NM_014728	human	genbank	57_37b	+1	reviewed	missense	c.665	p.C222F	1.000	HMMSmart_B41	PatternScan_WW_DOMAIN_1,PatternScan_FERM_1,PatternScan_FERM_2,superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ,HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	-	no_errors	
FSD2	123722	genome.wustl.edu	37	15	83437686	83437686	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	83437686	83437686	G	A	SNP	FSD2	NM_001007122	human	genbank	57_37b	-1	provisional	missense	c.1499	p.S500L	1.000	HMMPfam_fn3,superfamily_FN_III-like,HMMSmart_FN3	HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like,HMMPfam_SPRY	-	no_errors	
GALNT7	51809	genome.wustl.edu	37	4	174223291	174223291	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	174223291	174223291	T	C	SNP	GALNT7	NM_017423	human	genbank	57_37b	+1	reviewed	silent	c.1242	p.G414	1.000	superfamily_Nucleotide-diphospho-sugar transferases	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMPfam_Ricin_B_lectin,HMMSmart_SM00458	-	no_errors	
GLI3	2737	genome.wustl.edu	37	7	42005086	42005086	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	42005086	42005086	G	A	SNP	GLI3	NM_000168	human	genbank	57_37b	-1	reviewed	silent	c.3585	p.N1195	0.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
GRIA2	2891	genome.wustl.edu	37	4	158282695	158282695	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	158282695	158282695	C	T	SNP	GRIA2	NM_000826	human	genbank	57_37b	+1	reviewed	missense	c.2297	p.P766L	1.000	superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan	superfamily_SSF53822,HMMPfam_ANF_receptor,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors	
GRIA3	2892	genome.wustl.edu	37	X	122598837	122598837	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	122598837	122598837	C	A	SNP	GRIA3	ENST00000264357	human	ensembl	57_37b	+1	known	missense	c.2198	p.A733D	1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors	
HDAC9	9734	genome.wustl.edu	37	7	18833076	18833076	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	18833076	18833076	G	T	SNP	HDAC9	NM_178425	human	genbank	57_37b	+1	reviewed	splice_site	c.2322+1	e16+1	1.000	-	-	-	no_errors	
HLA-DRB1	3123	genome.wustl.edu	37	6	32549362	32549362	+	Silent	SNP	G	G	A	rs3200488	byFrequency	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32549362	32549362	G	A	SNP	HLA-DRB1	NM_002124	human	genbank	57_37b	-1	reviewed	silent	c.624	p.S208	0.270	superfamily_SSF48726,HMMPfam_C1-set,HMMSmart_IGc1	superfamily_MHC_I/II-like_Ag-recog,HMMPfam_MHC_II_beta,superfamily_SSF48726,HMMPfam_C1-set,HMMSmart_IGc1,PatternScan_IG_MHC	-		
INTS7	25896	genome.wustl.edu	37	1	212148707	212148707	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	212148707	212148707	T	C	SNP	INTS7	NM_015434	human	genbank	57_37b	-1	provisional	missense	c.1616	p.H539R	1.000	NULL	superfamily_ARM repeat	-	no_errors	
KERA	11081	genome.wustl.edu	37	12	91449597	91449597	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	91449597	91449597	C	T	SNP	KERA	NM_007035	human	genbank	57_37b	-1	validated	silent	c.462	p.V154	0.997	superfamily_SSF52058,HMMPfam_LRR_1	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1	-	no_errors	
KIAA1009	22832	genome.wustl.edu	37	6	84904772	84904772	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	84904772	84904772	C	T	SNP	KIAA1009	NM_014895	human	genbank	57_37b	-1	validated	missense	c.857	p.S286N	0.971	NULL	NULL	-	no_errors	
KLC4	89953	genome.wustl.edu	37	6	43029294	43029294	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43029294	43029294	C	T	SNP	KLC4	NM_201523	human	genbank	57_37b	+1	validated	missense	c.275	p.S92F	1.000	superfamily_TPR-like	superfamily_TPR-like,HMMPfam_Rab5-bind,HMMPfam_TPR_1,HMMSmart_SM00028,PatternScan_KINESIN_LIGHT	-	no_errors	
LENEP	55891	genome.wustl.edu	37	1	154966145	154966145	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154966145	154966145	G	A	SNP	LENEP	NM_018655	human	genbank	57_37b	+1	reviewed	missense	c.62	p.R21Q	0.000	NULL	NULL	-	no_errors	
LGSN	51557	genome.wustl.edu	37	6	63989962	63989962	+	Silent	SNP	A	A	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	63989962	63989962	A	T	SNP	LGSN	NM_016571	human	genbank	57_37b	-1	reviewed	silent	c.1494	p.A498	0.903	superfamily_Glutamine synthetase/guanido kinase	superfamily_Glutamine synthetase N-terminal domain,HMMPfam_Gln-synt_N,HMMPfam_Gln-synt_C,superfamily_Glutamine synthetase/guanido kinase	-	no_errors	
LOC100288105	0	genome.wustl.edu	37	5	140242970	140242970	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140242970	140242970	G	A	SNP	LOC100288105	XM_002342568	human	genbank	57_37b	-1	model	silent	c.6	p.H2	0.000	NULL	NULL	-	no_errors	
LOC342346	342346	genome.wustl.edu	37	16	4626490	4626490	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4626490	4626490	C	-	DEL	LOC342346	NM_001145011	human	genbank	57_37b	+1	predicted	frame_shift_del	c.2009	p.K671fs	0.006	NULL	NULL	(deletion:cds_exon[4625175,4626636])	no_errors	
LOC441228	441228	genome.wustl.edu	37	7	56358575	56358575	+	RNA	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	56358575	56358575	C	T	SNP	LOC441228	XR_016387	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-	no_errors	
LRRC40	55631	genome.wustl.edu	37	1	70641557	70641557	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	70641557	70641557	G	A	SNP	LRRC40	NM_017768	human	genbank	57_37b	-1	provisional	missense	c.913	p.P305S	1.000	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors	
LRRC7	57554	genome.wustl.edu	37	1	70446130	70446130	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	70446130	70446130	A	G	SNP	LRRC7	NM_020794	human	genbank	57_37b	+1	validated	silent	c.666	p.L222	0.996	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	superfamily_L domain-like,HMMSmart_SM00364,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_RNI-like,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors	
MEP1A	4224	genome.wustl.edu	37	6	46787380	46787380	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	46787380	46787380	C	A	SNP	MEP1A	NM_005588	human	genbank	57_37b	+1	validated	missense	c.495	p.H165Q	0.948	superfamily_SSF55486,HMMSmart_ZnMc,HMMPfam_Astacin	PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF55486,HMMSmart_ZnMc,HMMPfam_Astacin,PatternScan_ZINC_PROTEASE,HMMSmart_MAM,HMMPfam_MAM,PatternScan_MAM_1,superfamily_Traf_like,HMMSmart_MATH,HMMPfam_MATH,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF	-	no_errors	
MIR342	0	genome.wustl.edu	37	14	100576047	100576047	+	RNA	SNP	A	A	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	100576047	100576047	A	G	SNP	MIR342	ENST00000362212	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	
MTMR12	54545	genome.wustl.edu	37	5	32233991	32233991	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32233991	32233991	A	C	SNP	MTMR12	NM_001040446	human	genbank	57_37b	-1	reviewed	missense	c.1562	p.V521G	1.000	superfamily_(Phosphotyrosine protein) phosphatases II	superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related	-	no_errors	
MUC5B	727897	genome.wustl.edu	37	11	1269544	1269544	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1269544	1269544	A	-	DEL	MUC5B	NM_002458	human	genbank	57_37b	+1	validated	frame_shift_del	c.11443	p.T3815fs	0.000	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_SM00041,HMMPfam_Cys_knot,PatternScan_CTCK_1	(deletion:cds_exon[1262081,1272973])	no_errors	
MUM1	84939	genome.wustl.edu	37	19	1370675	1370675	+	Silent	SNP	C	G	G	rs12608765	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1370675	1370675	C	G	SNP	MUM1	NM_032853	human	genbank	57_37b	+1	validated	silent	c.1587	p.V529	0.000	NULL	superfamily_Tudor/PWWP/MBT	-		
MYB	4602	genome.wustl.edu	37	6	135520049	135520049	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	135520049	135520049	T	G	SNP	MYB	NM_001130173	human	genbank	57_37b	+1	reviewed	missense	c.1570	p.L524V	1.000	HMMPfam_Cmyb_C	HMMSmart_SM00717,HMMPfam_Myb_DNA-binding,superfamily_Homeodomain-like,HMMPfam_Wos2,HMMPfam_Cmyb_C	-	no_errors	
MYOT	9499	genome.wustl.edu	37	5	137211662	137211662	+	Nonsense_Mutation	SNP	C	C	A	rs78456545	byCluster;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	137211662	137211662	C	A	SNP	MYOT	NM_006790	human	genbank	57_37b	+1	reviewed	nonsense	c.501	p.C167*	1.000	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,PatternScan_ER_TARGET	-		
NDUFA10	4705	genome.wustl.edu	37	2	240954240	240954242	+	In_Frame_Del	DEL	GAT	GAT	-	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	GAT	GAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	240954240	240954242	GAT	-	DEL	NDUFA10	NM_004544	human	genbank	57_37b	-1	reviewed	in_frame_del	c.585_583	p.I195in_frame_del	0.000:0.000:0.000	superfamily_SSF52540,HMMPfam_dNK	superfamily_SSF52540,HMMPfam_dNK	(deletion:cds_exon[240954156,240954277])	no_errors	
NINJ2	4815	genome.wustl.edu	37	12	675138	675138	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	675138	675138	G	A	SNP	NINJ2	NM_016533	human	genbank	57_37b	-1	validated	silent	c.378	p.I126	0.488	HMMPfam_Ninjurin	HMMPfam_Ninjurin	-	no_errors	
NKAIN2	154215	genome.wustl.edu	37	6	124676437	124676437	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	124676437	124676437	G	A	SNP	NKAIN2	NM_001040214	human	genbank	57_37b	+1	validated	missense	c.217	p.V73I	1.000	HMMPfam_NKAIN	HMMPfam_NKAIN	-	no_errors	
NPW	283869	genome.wustl.edu	37	16	2070568	2070568	+	Missense_Mutation	SNP	A	A	C	rs2286472	byCluster;byFrequency;by1000genomes	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2070568	2070568	A	C	SNP	NPW	NM_001099456	human	genbank	57_37b	+1	reviewed	missense	c.446	p.D149A	0.000	NULL	NULL	-		
NTHL1	4913	genome.wustl.edu	37	16	2096293	2096293	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2096293	2096293	C	T	SNP	NTHL1	NM_002528	human	genbank	57_37b	-1	reviewed	missense	c.214	p.D72N	0.034	NULL	PatternScan_ENDONUCLEASE_III_1,superfamily_DNA_glycsylse,HMMPfam_HhH-GPD,HMMSmart_ENDO3c,HMMPfam_HHH,PatternScan_ENDONUCLEASE_III_2,HMMSmart_FES	-	no_errors	
OTUD4	54726	genome.wustl.edu	37	4	146064523	146064523	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	146064523	146064523	C	T	SNP	OTUD4	NM_001102653	human	genbank	57_37b	-1	reviewed	silent	c.1482	p.A494	0.988	NULL	superfamily_SSF54001,HMMPfam_OTU	-	no_errors	
PARP4	143	genome.wustl.edu	37	13	25058867	25058867	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25058867	25058867	C	T	SNP	PARP4	NM_006437	human	genbank	57_37b	-1	reviewed	missense	c.1372	p.V458I	0.992	HMMPfam_PARP,superfamily_SSF56399	HMMPfam_BRCT,superfamily_BRCT,HMMSmart_BRCT,superfamily_PARP_reg,HMMPfam_PARP,superfamily_SSF56399,HMMSmart_VIT,HMMPfam_VIT,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA	-	no_errors	
PSMC4	5704	genome.wustl.edu	37	19	40487109	40487109	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	40487109	40487109	T	C	SNP	PSMC4	NM_006503	human	genbank	57_37b	+1	reviewed	missense	c.1154	p.L385S	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
PTGER1	5731	genome.wustl.edu	37	19	14583533	14583533	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14583533	14583533	C	T	SNP	PTGER1	NM_000955	human	genbank	57_37b	-1	reviewed	missense	c.1048	p.V350M	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
RCAN1	1827	genome.wustl.edu	37	21	35890532	35890532	+	Silent	SNP	T	T	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	35890532	35890532	T	G	SNP	RCAN1	NM_004414	human	genbank	57_37b	-1	reviewed	silent	c.609	p.A203	0.600	HMMPfam_Calcipressin	HMMPfam_Calcipressin	-	no_errors	
RRP7B	91695	genome.wustl.edu	37	22	42972063	42972063	+	RNA	SNP	C	C	T	rs3752506	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	42972063	42972063	C	T	SNP	RRP7B	NR_002184	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.989	-	-	-		
SCARA3	51435	genome.wustl.edu	37	8	27516828	27516828	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	27516828	27516828	G	A	SNP	SCARA3	NM_016240	human	genbank	57_37b	+1	reviewed	missense	c.1141	p.V381M	1.000	NULL	HMMPfam_Collagen	-	no_errors	
SDR16C6	0	genome.wustl.edu	37	8	57307803	57307803	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	57307803	57307803	G	T	SNP	SDR16C6	NM_001145251	human	genbank	57_37b	-1	inferred	missense	c.122	p.T41K	1.000	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short	-	no_errors	
SHPRH	257218	genome.wustl.edu	37	6	146276440	146276440	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	146276440	146276440	G	C	SNP	SHPRH	NM_001042683	human	genbank	57_37b	-1	validated	missense	c.19	p.R7G	1.000	NULL	"superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00526,HMMPfam_Linker_histone,superfamily_""Winged helix"" DNA-binding domain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_RING/U-box,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMSmart_SM00490,HMMPfam_Helicase_C"	-	no_errors	
SIGLEC12	89858	genome.wustl.edu	37	19	52001438	52001438	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52001438	52001438	C	A	SNP	SIGLEC12	NM_053003	human	genbank	57_37b	-1	reviewed	missense	c.1239	p.W413C	0.084	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_ig	-	no_errors	
SLC5A4	6527	genome.wustl.edu	37	22	32614516	32614516	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	32614516	32614516	G	A	SNP	SLC5A4	NM_014227	human	genbank	57_37b	-1	validated	silent	c.1965	p.H655	0.296	NULL	HMMPfam_SSF,PatternScan_NA_SOLUT_SYMP_1,PatternScan_NA_SOLUT_SYMP_2	-	no_errors	
SNTG2	54221	genome.wustl.edu	37	2	1271265	1271265	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	1271265	1271265	C	T	SNP	SNTG2	NM_018968	human	genbank	57_37b	+1	reviewed	silent	c.1206	p.N402	0.004	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors	
SPNS3	201305	genome.wustl.edu	37	17	4389850	4389850	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	4389850	4389850	C	T	SNP	SPNS3	NM_182538	human	genbank	57_37b	+1	validated	silent	c.1422	p.D474	1.000	NULL	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	-	no_errors	
TAOK1	57551	genome.wustl.edu	37	17	27805320	27805320	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27805320	27805320	C	G	SNP	TAOK1	NM_020791	human	genbank	57_37b	+1	validated	missense	c.404	p.A135G	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7577106	7577106	+	Missense_Mutation	SNP	G	G	C	rs17849781	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577106	7577106	G	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.832	p.P278A	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-		
TTN	7273	genome.wustl.edu	37	2	179396209	179396209	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179396209	179396209	C	G	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.97423	p.D32475H	1.000	NULL	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179569129	179569129	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179569129	179569129	C	G	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.26236	p.A8746P	0.139	HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors	
UNC5D	137970	genome.wustl.edu	37	8	35631900	35631900	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	35631900	35631900	C	A	SNP	UNC5D	NM_080872	human	genbank	57_37b	+1	validated	silent	c.2562	p.P854	1.000	superfamily_DEATH domain,HMMSmart_SM00005	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,PatternScan_SERPIN,HMMPfam_ZU5,HMMSmart_SM00218,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors	
WDR75	84128	genome.wustl.edu	37	2	190327230	190327230	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	190327230	190327230	G	A	SNP	WDR75	NM_032168	human	genbank	57_37b	+1	provisional	missense	c.799	p.G267S	0.998	superfamily_WD40_like,HMMSmart_WD40	PatternScan_WD_REPEATS_1,HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	-	no_errors	
YWHAB	7529	genome.wustl.edu	37	20	43530358	43530358	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	43530358	43530358	C	T	SNP	YWHAB	NM_003404	human	genbank	57_37b	+1	reviewed	missense	c.184	p.R62C	1.000	superfamily_14-3-3 protein,HMMPfam_14-3-3,HMMSmart_SM00101	superfamily_14-3-3 protein,HMMPfam_14-3-3,HMMSmart_SM00101,PatternScan_1433_1,PatternScan_1433_2	-	no_errors	
ZBTB41	360023	genome.wustl.edu	37	1	197169544	197169544	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	197169544	197169544	T	G	SNP	ZBTB41	NM_194314	human	genbank	57_37b	-1	validated	missense	c.60	p.K20N	0.998	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZBTB49	0	genome.wustl.edu	37	4	4314784	4314784	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	4314784	4314784	C	G	SNP	ZBTB49	NM_145291	human	genbank	57_37b	+1	validated	missense	c.1319	p.T440S	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZHX1	11244	genome.wustl.edu	37	8	124266845	124266845	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	124266845	124266845	G	A	SNP	ZHX1	NM_001017926	human	genbank	57_37b	-1	reviewed	missense	c.1342	p.P448S	0.595	NULL	PatternScan_ZINC_FINGER_C2H2_1,PatternScan_HOMEOBOX_1,HMMSmart_ZnF_C2H2,HMMSmart_HOX,superfamily_Homeodomain_like,HMMPfam_Homeobox	-	no_errors	
ZNF192	7745	genome.wustl.edu	37	6	28120996	28120996	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	28120996	28120996	G	A	SNP	ZNF192	NM_006298	human	genbank	57_37b	+1	validated	missense	c.938	p.R313Q	0.998	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,HMMPfam_KRAB,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF429	353088	genome.wustl.edu	37	19	21720707	21720707	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A142-01A-11D-A10Y-09	TCGA-D8-A142-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	21720707	21720707	G	C	SNP	ZNF429	NM_001001415	human	genbank	57_37b	+1	provisional	missense	c.1852	p.E618Q	1.000	superfamily_SSF57667	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
