Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ANKAR	150709	genome.wustl.edu	37	2	190560903	190560903	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	190560903	190560903	G	C	SNP	ANKAR	NM_144708	human	genbank	57_37b	+1	validated	missense	c.1303	p.V435L	1.000	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors	
AVPI1	60370	genome.wustl.edu	37	10	99439541	99439541	+	Missense_Mutation	SNP	G	G	C	rs2275047	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	99439541	99439541	G	C	SNP	AVPI1	NM_021732	human	genbank	57_37b	-1	validated	missense	c.122	p.A41G	1.000	NULL	NULL	-		
C6orf225	619208	genome.wustl.edu	37	6	112421934	112421934	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	112421934	112421934	T	A	SNP	C6orf225	NM_001033564	human	genbank	57_37b	+1	validated	missense	c.187	p.Y63N	1.000	NULL	NULL	-	no_errors	
C9orf64	84267	genome.wustl.edu	37	9	86571300	86571300	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	86571300	86571300	G	T	SNP	C9orf64	NM_032307	human	genbank	57_37b	-1	validated	missense	c.116	p.A39E	0.001	NULL	HMMPfam_DUF2419	-	no_errors	
CACNA1C	775	genome.wustl.edu	37	12	2714315	2714315	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	2714315	2714315	A	G	SNP	CACNA1C	NM_199460	human	genbank	57_37b	+1	reviewed	missense	c.3089	p.N1030S	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CCDC144A	9720	genome.wustl.edu	37	17	16593944	16593944	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	16593944	16593944	G	A	SNP	CCDC144A	NM_014695	human	genbank	57_37b	+1	provisional	missense	c.230	p.R77H	0.000	NULL	NULL	-	no_errors	
CCDC37	348807	genome.wustl.edu	37	3	126137618	126137618	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	126137618	126137618	G	A	SNP	CCDC37	NM_182628	human	genbank	57_37b	+1	validated	splice_site	c.650+1	e6+1	0.994	-	-	-	no_errors	
COL19A1	1310	genome.wustl.edu	37	6	70733563	70733563	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	70733563	70733563	T	G	SNP	COL19A1	NM_001858	human	genbank	57_37b	+1	reviewed	missense	c.1071	p.N357K	0.994	NULL	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMPfam_Collagen	-	no_errors	
CTNNBL1	56259	genome.wustl.edu	37	20	36488710	36488710	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	36488710	36488710	G	A	SNP	CTNNBL1	NM_030877	human	genbank	57_37b	+1	reviewed	missense	c.1567	p.G523R	1.000	NULL	HMMPfam_DUF1716,superfamily_ARM repeat	-	no_errors	
DAG1	1605	genome.wustl.edu	37	3	49568483	49568483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49568483	49568483	C	T	SNP	DAG1	NM_004393	human	genbank	57_37b	+1	reviewed	missense	c.539	p.S180F	0.999	HMMPfam_DAG1	HMMPfam_DAG1,superfamily_Cadherin,HMMSmart_CADG,superfamily_SSF111006	-	no_errors	
DDX11L8	0	genome.wustl.edu	37	12	9464152	9464152	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	9464152	9464152	C	T	SNP	DDX11L8	ENST00000341155	human	ensembl	57_37b	+1	known	nonsense	c.2209	p.Q737*	1.000	HMMSmart_SM00491	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00488,HMMPfam_DEAD_2,HMMSmart_SM00491	-	no_errors	
DQX1	165545	genome.wustl.edu	37	2	74746321	74746321	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74746321	74746321	G	T	SNP	DQX1	NM_133637	human	genbank	57_37b	-1	validated	missense	c.1843	p.L615I	0.932	HMMPfam_DUF1605	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors	
ETV3	2117	genome.wustl.edu	37	1	157105452	157105452	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	157105452	157105452	G	A	SNP	ETV3	NM_001145312	human	genbank	57_37b	-1	validated	missense	c.95	p.S32F	1.000	"superfamily_""Winged helix"" DNA-binding domain"	"superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2"	-	no_errors	
FAM111A	63901	genome.wustl.edu	37	11	58919922	58919923	+	Frame_Shift_Ins	INS	-	-	GCAGATACTT	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	58919922	58919923	-	GCAGATACTT	INS	FAM111A	NM_001142519	human	genbank	57_37b	+1	validated	frame_shift_ins	c.781_782	p.F264fs	0.556:0.451	NULL	superfamily_Pept_Ser_Cys	-	no_errors	
FAM123B	139285	genome.wustl.edu	37	X	63411643	63411643	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	63411643	63411643	G	A	SNP	FAM123B	NM_152424	human	genbank	57_37b	-1	validated	silent	c.1524	p.F508	1.000	HMMPfam_WTX	HMMPfam_WTX	-	no_errors	
FAM189A2	9413	genome.wustl.edu	37	9	71998865	71998865	+	Silent	SNP	A	A	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	71998865	71998865	A	T	SNP	FAM189A2	NM_001127608	human	genbank	57_37b	+1	validated	silent	c.627	p.G209	0.998	NULL	NULL	-	no_errors	
FDX1L	112812	genome.wustl.edu	37	19	10426628	10426628	+	Silent	SNP	T	T	C	rs395782	byCluster;byFrequency;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10426628	10426628	T	C	SNP	FDX1L	NM_001031734	human	genbank	57_37b	-1	validated	silent	c.45	p.L15	0.004	NULL	superfamily_Ferredoxin,HMMPfam_Fer2,PatternScan_ADX	-		
FMR1	2332	genome.wustl.edu	37	X	147024827	147024827	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	147024827	147024827	C	T	SNP	FMR1	NM_002024	human	genbank	57_37b	+1	reviewed	silent	c.1452	p.R484	0.998	NULL	HMMPfam_Agenet,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	-	no_errors	
FPR1	2357	genome.wustl.edu	37	19	52249706	52249706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52249706	52249706	G	A	SNP	FPR1	NM_002029	human	genbank	57_37b	-1	validated	missense	c.542	p.S181L	0.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
FZD8	8325	genome.wustl.edu	37	10	35929970	35929970	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	35929970	35929970	G	C	SNP	FZD8	NM_031866	human	genbank	57_37b	-1	reviewed	missense	c.388	p.P130A	1.000	HMMPfam_Fz,superfamily_Frizzled_Cys-rich,HMMSmart_FRI	HMMPfam_Fz,superfamily_Frizzled_Cys-rich,HMMSmart_FRI,HMMPfam_Frizzled	-	no_errors	
GABRA6	2559	genome.wustl.edu	37	5	161116329	161116329	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	161116329	161116329	C	T	SNP	GABRA6	NM_000811	human	genbank	57_37b	+1	reviewed	silent	c.516	p.L172	1.000	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors	
GOLGA7B	0	genome.wustl.edu	37	10	99619286	99619286	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	99619286	99619286	C	T	SNP	GOLGA7B	NM_001010917	human	genbank	57_37b	+1	provisional	silent	c.84	p.S28	0.992	HMMPfam_Erf4	HMMPfam_Erf4	-	no_errors	
GPHN	10243	genome.wustl.edu	37	14	67610087	67610087	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	67610087	67610087	A	G	SNP	GPHN	NM_020806	human	genbank	57_37b	+1	reviewed	missense	c.1757	p.D586G	1.000	superfamily_MoCF_biosynth,HMMPfam_MoCF_biosynth	superfamily_MoCF_biosynth,HMMPfam_MoCF_biosynth,PatternScan_MOCF_BIOSYNTHESIS_1,superfamily_MoeA_N,HMMPfam_MoeA_N,PatternScan_MOCF_BIOSYNTHESIS_2,superfamily_MoeA_C,HMMPfam_MoeA_C	-	no_errors	
IFI16	3428	genome.wustl.edu	37	1	159021640	159021640	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	159021640	159021640	G	C	SNP	IFI16	NM_005531	human	genbank	57_37b	+1	reviewed	missense	c.1669	p.V557L	0.970	HMMPfam_HIN	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,HMMPfam_HIN	-	no_errors	
KIAA1409	57578	genome.wustl.edu	37	14	94097185	94097185	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	94097185	94097185	C	T	SNP	KIAA1409	NM_020818	human	genbank	57_37b	+1	validated	nonsense	c.5116	p.R1706*	1.000	NULL	NULL	-	no_errors	
KIF26A	26153	genome.wustl.edu	37	14	104642341	104642341	+	Silent	SNP	A	A	G	rs2487304	byCluster;byHapMap;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	104642341	104642341	A	G	SNP	KIF26A	NM_015656	human	genbank	57_37b	+1	validated	silent	c.3216	p.P1072	0.028	NULL	PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540,HMMSmart_KISc,HMMPfam_Kinesin	-		
KRTAP9-9	81870	genome.wustl.edu	37	17	39412058	39412058	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39412058	39412058	C	T	SNP	KRTAP9-9	NM_030975	human	genbank	57_37b	+1	reviewed	missense	c.361	p.R121C	0.004	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors	
LOC100130996	0	genome.wustl.edu	37	1	182151909	182151909	+	Silent	SNP	A	A	G	rs1689791	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	182151909	182151909	A	G	SNP	LOC100130996	XM_001726581	human	genbank	57_37b	-1	model	silent	c.381	p.V127	0.996	NULL	HMMPfam_Yippee	-		
LOC100287423	0	genome.wustl.edu	37	12	110778619	110778619	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	110778619	110778619	C	T	SNP	LOC100287423	XM_002343207	human	genbank	57_37b	-1	model	missense	c.3	p.M1I	1.000	NULL	NULL	-	no_errors	
LOC100289470	0	genome.wustl.edu	37	5	178951453	178951453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	178951453	178951453	G	A	SNP	LOC100289470	XM_002342585	human	genbank	57_37b	+1	model	missense	c.494	p.R165Q	0.030	NULL	NULL	-	no_errors	
LOC100289589	0	genome.wustl.edu	37	4	1656801	1656801	+	Missense_Mutation	SNP	A	A	C	rs62287700	byCluster;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	1656801	1656801	A	C	SNP	LOC100289589	XM_002342423	human	genbank	57_37b	+1	model	missense	c.741	p.Q247H	0.001	NULL	NULL	-		
LOC100290137	0	genome.wustl.edu	37	19	1074252	1074252	+	Missense_Mutation	SNP	T	T	G	rs11084881	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1074252	1074252	T	G	SNP	LOC100290137	XM_002347886	human	genbank	57_37b	+1	model	missense	c.475	p.C159G	0.000	NULL	NULL	-		
LOC442249	442249	genome.wustl.edu	37	6	112683392	112683392	+	RNA	SNP	G	G	A	rs12055528	byCluster;byFrequency;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	112683392	112683392	G	A	SNP	LOC442249	XR_016871	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.997	-	-	-		
LOC728767	728767	genome.wustl.edu	37	13	110435953	110435953	+	Missense_Mutation	SNP	A	A	G	rs4773092	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	110435953	110435953	A	G	SNP	LOC728767	XM_001714911	human	genbank	57_37b	+1	model	missense	c.1504	p.T502A	0.000	NULL	PatternScan_LIPOCALIN	-		
LPHN1	22859	genome.wustl.edu	37	19	14274041	14274041	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14274041	14274041	T	C	SNP	LPHN1	NM_001008701	human	genbank	57_37b	-1	reviewed	missense	c.587	p.Y196C	0.998	HMMPfam_OLF,HMMSmart_SM00284	HMMPfam_Gal_Lectin,HMMPfam_OLF,HMMSmart_SM00284,HMMSmart_SM00008,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2,HMMPfam_Latrophilin	-	no_errors	
LRRC8A	56262	genome.wustl.edu	37	9	131670265	131670265	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	131670265	131670265	G	C	SNP	LRRC8A	NM_001127244	human	genbank	57_37b	+1	reviewed	missense	c.822	p.K274N	1.000	NULL	superfamily_L domain-like,HMMSmart_SM00369,HMMSmart_SM00365,HMMPfam_LRR_1	-	no_errors	
MAGEB6	158809	genome.wustl.edu	37	X	26212547	26212547	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	26212547	26212547	T	G	SNP	MAGEB6	NM_173523	human	genbank	57_37b	+1	reviewed	missense	c.584	p.V195G	0.086	NULL	HMMPfam_MAGE	-	no_errors	
MBD6	114785	genome.wustl.edu	37	12	57918753	57918754	+	Frame_Shift_Ins	INS	-	-	TTGGCCCC	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57918753	57918754	-	TTGGCCCC	INS	MBD6	NM_052897	human	genbank	57_37b	+1	validated	frame_shift_ins	c.234_235	p.V81fs	1.000:0.995	HMMPfam_MBD	HMMPfam_MBD	-	no_errors	
MEN1	4221	genome.wustl.edu	37	11	64577330	64577333	+	Frame_Shift_Del	DEL	AGAC	AGAC	-	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	AGAC	AGAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64577330	64577333	AGAC	-	DEL	MEN1	NM_000244	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.252_249	p.I85fs	0.999:0.998:0.970:0.066	HMMPfam_Menin	HMMPfam_Menin	(deletion:cds_exon[64577122,64577581])	no_errors	
MSI2	124540	genome.wustl.edu	37	17	55478762	55478762	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	55478762	55478762	T	A	SNP	MSI2	NM_138962	human	genbank	57_37b	+1	reviewed	missense	c.335	p.I112K	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
MUC16	94025	genome.wustl.edu	37	19	8982254	8982254	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8982254	8982254	C	T	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	silent	c.42021	p.L14007	0.002	superfamily_SEA domain,HMMPfam_SEA	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MYO16	23026	genome.wustl.edu	37	13	109793246	109793246	+	Silent	SNP	G	G	C	rs80260507	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	109793246	109793246	G	C	SNP	MYO16	NM_015011	human	genbank	57_37b	+1	validated	silent	c.4620	p.P1540	0.201	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMPfam_IQ	-		
MYO1H	283446	genome.wustl.edu	37	12	109831184	109831184	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	109831184	109831184	G	A	SNP	MYO1H	NM_001101421	human	genbank	57_37b	+1	provisional	missense	c.175	p.G59R	0.717	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMPfam_Myosin_TH1	-	no_errors	
MYO9B	4650	genome.wustl.edu	37	19	17317135	17317135	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17317135	17317135	C	G	SNP	MYO9B	NM_004145	human	genbank	57_37b	+1	reviewed	missense	c.5336	p.P1779R	1.000	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	HMMPfam_RA,HMMSmart_RA,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors	
NCOR1	9611	genome.wustl.edu	37	17	16068397	16068397	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	16068397	16068397	A	-	DEL	NCOR1	NM_006311	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.514	p.S172fs	1.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	(deletion:cds_exon[16068293,16068475])	no_errors	
NEIL3	55247	genome.wustl.edu	37	4	178231219	178231219	+	Missense_Mutation	SNP	C	C	T	rs34007209	byCluster;byFrequency;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	178231219	178231219	C	T	SNP	NEIL3	NM_018248	human	genbank	57_37b	+1	validated	missense	c.112	p.R38C	0.000	NULL	superfamily_N-terminal domain of MutM-like DNA repair proteins,HMMPfam_H2TH,superfamily_S13-like H2TH domain,PatternScan_ZF_FPG_1,superfamily_NZF domain,HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,HMMPfam_zf-GRF	-		
NLGN1	22871	genome.wustl.edu	37	3	173998327	173998327	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	173998327	173998327	G	T	SNP	NLGN1	NM_014932	human	genbank	57_37b	+1	reviewed	missense	c.1706	p.R569L	1.000	HMMPfam_COesterase,superfamily_SSF53474	HMMPfam_COesterase,superfamily_SSF53474,PatternScan_CARBOXYLESTERASE_B_2	-	no_errors	
OAS1	4938	genome.wustl.edu	37	12	113357242	113357242	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	113357242	113357242	C	G	SNP	OAS1	NM_016816	human	genbank	57_37b	+1	reviewed	missense	c.1087	p.Q363E	0.000	NULL	superfamily_Nucleotidyltransferase,PatternScan_25A_SYNTH_1,HMMPfam_OAS1_C,superfamily_PAP/OAS1 substrate-binding domain,PatternScan_25A_SYNTH_2	-	no_errors	
OR4M1	441670	genome.wustl.edu	37	14	20249411	20249411	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20249411	20249411	T	G	SNP	OR4M1	NM_001005500	human	genbank	57_37b	+1	provisional	missense	c.930	p.C310W	0.979	NULL	superfamily_Family A G protein-coupled receptor-like,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PASK	23178	genome.wustl.edu	37	2	242066754	242066754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	242066754	242066754	C	T	SNP	PASK	NM_015148	human	genbank	57_37b	-1	validated	missense	c.1576	p.G526R	0.000	NULL	HMMSmart_SM00091,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain),superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
PDE4DIP	9659	genome.wustl.edu	37	1	145075683	145075683	+	Nonsense_Mutation	SNP	C	C	T	rs2762779	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145075683	145075683	C	T	SNP	PDE4DIP	NM_022359	human	genbank	57_37b	-1	validated	nonsense	c.180	p.W60*	1.000	NULL	HMMPfam_Microtub_assoc	-		
PDZD2	23037	genome.wustl.edu	37	5	32101025	32101025	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32101025	32101025	G	A	SNP	PDZD2	ENST00000397559	human	ensembl	57_37b	+1	known	missense	c.68	p.R23K	0.000	superfamily_PDZ	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PLIN2	123	genome.wustl.edu	37	9	19126264	19126264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	19126264	19126264	G	A	SNP	PLIN2	NM_001122	human	genbank	57_37b	-1	reviewed	missense	c.74	p.T25M	1.000	HMMPfam_Perilipin	HMMPfam_Perilipin,superfamily_Mannose-6-phosphate receptor binding protein 1 (Tip47) C-terminal domain	-	no_errors	
PLXNB2	23654	genome.wustl.edu	37	22	50720419	50720421	+	In_Frame_Del	DEL	GTG	GTG	-	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	GTG	GTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	50720419	50720421	GTG	-	DEL	PLXNB2	NM_012401	human	genbank	57_37b	-1	validated	in_frame_del	c.3209_3207	p.T1070in_frame_del	0.999:1.000:1.000	superfamily_Ig_E-set,HMMSmart_IPT,HMMPfam_TIG	superfamily_Sema,HMMPfam_Sema,HMMSmart_Sema,HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold,superfamily_Ig_E-set,HMMSmart_IPT,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_Rho_GAP	(deletion:cds_exon[50720283,50720510])	no_errors	
PRKG1	5592	genome.wustl.edu	37	10	52834557	52834557	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	52834557	52834557	G	T	SNP	PRKG1	NM_006258	human	genbank	57_37b	+1	validated	missense	c.207	p.Q69H	0.996	NULL	superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133	-	no_errors	
RAB20	55647	genome.wustl.edu	37	13	111176519	111176519	+	Silent	SNP	G	G	T	rs375814	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	111176519	111176519	G	T	SNP	RAB20	NM_017817	human	genbank	57_37b	-1	provisional	silent	c.198	p.G66	0.999	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMPfam_Ras,HMMSmart_SM00175,HMMSmart_SM00174	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMPfam_Ras,HMMSmart_SM00175,HMMSmart_SM00174	-		
RP1	6101	genome.wustl.edu	37	8	55539493	55539493	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	55539493	55539493	G	A	SNP	RP1	NM_006269	human	genbank	57_37b	+1	reviewed	silent	c.3051	p.L1017	0.000	NULL	superfamily_SSF89837,HMMSmart_DCX,HMMPfam_DCX	-	no_errors	
RTEL1	51750	genome.wustl.edu	37	20	62311271	62311271	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62311271	62311271	G	A	SNP	RTEL1	NM_032957	human	genbank	57_37b	+1	reviewed	silent	c.1107	p.L369	1.000	NULL	superfamily_SSF52540,HMMSmart_DEXDc2,HMMPfam_ResIII,HMMPfam_DEAD_2,HMMSmart_HELICc2,superfamily_SSF57850	-	no_errors	
RTEL1	51750	genome.wustl.edu	37	20	62312019	62312019	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62312019	62312019	G	A	SNP	RTEL1	NM_032957	human	genbank	57_37b	+1	reviewed	missense	c.1138	p.A380T	0.190	NULL	HMMSmart_DEXDc2,HMMSmart_HELICc2,HMMPfam_ResIII,HMMPfam_DEAD_2,superfamily_SSF52540,superfamily_SSF57850	-	no_errors	
SAG	6295	genome.wustl.edu	37	2	234235788	234235788	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234235788	234235788	G	C	SNP	SAG	NM_000541	human	genbank	57_37b	+1	reviewed	missense	c.457	p.V153L	1.000	superfamily_Ig_E-set,HMMPfam_Arrestin_N	superfamily_Ig_E-set,HMMPfam_Arrestin_N,PatternScan_ARRESTINS,HMMPfam_Arrestin_C	-	no_errors	
SDK1	221935	genome.wustl.edu	37	7	4056882	4056882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	4056882	4056882	G	A	SNP	SDK1	NM_152744	human	genbank	57_37b	+1	validated	missense	c.2500	p.D834N	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
SHISA2	387914	genome.wustl.edu	37	13	26621019	26621019	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	26621019	26621019	G	A	SNP	SHISA2	NM_001007538	human	genbank	57_37b	-1	provisional	missense	c.520	p.R174W	0.972	NULL	NULL	-	no_errors	
SLC10A2	6555	genome.wustl.edu	37	13	103698518	103698518	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	103698518	103698518	T	C	SNP	SLC10A2	NM_000452	human	genbank	57_37b	-1	reviewed	missense	c.1012	p.K338E	0.000	NULL	HMMPfam_SBF	-	no_errors	
SLC4A11	83959	genome.wustl.edu	37	20	3209309	3209309	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	3209309	3209309	C	T	SNP	SLC4A11	NM_032034	human	genbank	57_37b	-1	validated	missense	c.2285	p.S762N	1.000	HMMPfam_HCO3_cotransp	superfamily_Phoshotransferase/anion transport protein,HMMPfam_HCO3_cotransp	-	no_errors	
SP3	6670	genome.wustl.edu	37	2	174777994	174777999	+	Frame_Shift_Del	DEL	TCTAAA	TCTAAA	-	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	TCTAAA	TCTAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	174777994	174777999	TCTAAA	-	DEL	SP3	NM_003111	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.1833	p.G612fs	1.000	NULL	HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	(deletion:cds_exon[174777798,174777994], intron[174777995,174783320])	no_errors	
SPEN	23013	genome.wustl.edu	37	1	16202800	16202801	+	Frame_Shift_Ins	INS	-	-	ATAGAGATCCTCGA	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16202800	16202801	-	ATAGAGATCCTCGA	INS	SPEN	NM_015001	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.508_509	p.P174fs	1.000:1.000	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1,superfamily_SPOC-like,HMMPfam_SPOC	-	no_errors	
STX7	8417	genome.wustl.edu	37	6	132792638	132792638	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	132792638	132792638	C	T	SNP	STX7	ENST00000434788	human	ensembl	57_37b	-1	known	splice_site	c.217-1	e5-1	0.970	-	-	-	no_errors	
TCF7	6932	genome.wustl.edu	37	5	133473797	133473797	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	133473797	133473797	C	T	SNP	TCF7	NM_003202	human	genbank	57_37b	+1	validated	silent	c.489	p.Y163	0.995	HMMPfam_CTNNB1_binding	HMMPfam_CTNNB1_binding,superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors	
TKT	7086	genome.wustl.edu	37	3	53263320	53263320	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	53263320	53263320	C	T	SNP	TKT	NM_001064	human	genbank	57_37b	-1	validated	missense	c.1240	p.G414S	1.000	superfamily_Thiamin diphosphate-binding fold (THDP-binding),HMMPfam_Transket_pyr	superfamily_Thiamin diphosphate-binding fold (THDP-binding),HMMPfam_Transketolase_N,PatternScan_TRANSKETOLASE_1,HMMPfam_Transket_pyr,PatternScan_TRANSKETOLASE_2,superfamily_TK C-terminal domain-like,HMMPfam_Transketolase_C	-	no_errors	
TLR8	51311	genome.wustl.edu	37	X	12937622	12937622	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	12937622	12937622	C	T	SNP	TLR8	NM_138636	human	genbank	57_37b	+1	reviewed	nonsense	c.463	p.Q155*	0.013	superfamily_SSF52047	superfamily_SSF52058,HMMPfam_LRR_1,superfamily_SSF52047,HMMSmart_LRR_TYP,HMMSmart_LRRCT,superfamily_TIR,HMMPfam_TIR	-	no_errors	
TMEM174	134288	genome.wustl.edu	37	5	72469563	72469563	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	72469563	72469563	G	A	SNP	TMEM174	NM_153217	human	genbank	57_37b	+1	validated	missense	c.493	p.G165S	0.585	NULL	NULL	-	no_errors	
ZCCHC8	55596	genome.wustl.edu	37	12	122966134	122966134	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122966134	122966134	T	C	SNP	ZCCHC8	NM_017612	human	genbank	57_37b	-1	validated	missense	c.953	p.Y318C	1.000	HMMSmart_SM00581,HMMPfam_PSP	HMMPfam_zf-CCHC,HMMSmart_SM00343,HMMSmart_SM00581,HMMPfam_PSP	-	no_errors	
ZNF18	7566	genome.wustl.edu	37	17	11881385	11881385	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	11881385	11881385	A	G	SNP	ZNF18	NM_144680	human	genbank	57_37b	-1	provisional	silent	c.1539	p.V513	0.973	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_KRAB,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF488	118738	genome.wustl.edu	37	10	48370595	48370595	+	Silent	SNP	G	G	A	rs11204210	byCluster;byFrequency;by1000genomes	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	48370595	48370595	G	A	SNP	ZNF488	NM_153034	human	genbank	57_37b	+1	provisional	silent	c.63	p.G21	0.000	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-		
ZNF804B	219578	genome.wustl.edu	37	7	88962693	88962693	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	88962693	88962693	C	-	DEL	ZNF804B	NM_181646	human	genbank	57_37b	+1	provisional	frame_shift_del	c.397	p.P133fs	1.000	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	(deletion:cds_exon[88962677,88966346])	no_errors	
ZNF814	400721	genome.wustl.edu	37	19	58384888	58384888	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A105-01A-11D-A10M-09	TCGA-E2-A105-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58384888	58384888	G	A	SNP	ZNF814	NM_001144989	human	genbank	57_37b	-1	validated	missense	c.1870	p.R624C	0.030	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
