Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ADAMTS1	9510	genome.wustl.edu	37	21	28214903	28214903	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	28214903	28214903	G	A	SNP	ADAMTS1	NM_006988	human	genbank	57_37b	-1	reviewed	silent	c.832	p.L278	0.988	superfamily_SSF55486,HMMPfam_Reprolysin	PatternScan_DISINTEGRIN_1,HMMPfam_Pep_M12B_propep,superfamily_SSF55486,HMMPfam_Reprolysin,PatternScan_ZINC_PROTEASE,HMMSmart_ACR,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1	-	no_errors	
AGTPBP1	23287	genome.wustl.edu	37	9	88211299	88211299	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	88211299	88211299	C	A	SNP	AGTPBP1	NM_015239	human	genbank	57_37b	-1	validated	missense	c.2281	p.G761W	1.000	NULL	superfamily_ARM-type_fold,superfamily_SSF53187,HMMPfam_Peptidase_M14	-	no_errors	
AGTPBP1	23287	genome.wustl.edu	37	9	88211299	88211299	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	88211299	88211299	C	A	SNP	AGTPBP1	NM_015239	human	genbank	57_37b	-1	validated	missense	c.2281	p.G761W	1.000	NULL	superfamily_ARM-type_fold,superfamily_SSF53187,HMMPfam_Peptidase_M14	-	no_errors	
ATL3	25923	genome.wustl.edu	37	11	63398771	63398771	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	63398771	63398771	T	G	SNP	ATL3	NM_015459	human	genbank	57_37b	-1	validated	missense	c.1280	p.N427T	0.337	superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	-	no_errors	
ATL3	25923	genome.wustl.edu	37	11	63398771	63398771	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	63398771	63398771	T	G	SNP	ATL3	NM_015459	human	genbank	57_37b	-1	validated	missense	c.1280	p.N427T	0.337	superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	-	no_errors	
BAT2L1	0	genome.wustl.edu	37	9	134362560	134362560	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	134362560	134362560	G	A	SNP	BAT2L1	NM_013318	human	genbank	57_37b	+1	validated	missense	c.5863	p.A1955T	0.995	NULL	HMMPfam_BAT2_N	-	no_errors	
BAT2L1	0	genome.wustl.edu	37	9	134362560	134362560	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	134362560	134362560	G	A	SNP	BAT2L1	NM_013318	human	genbank	57_37b	+1	validated	missense	c.5863	p.A1955T	0.995	NULL	HMMPfam_BAT2_N	-	no_errors	
C9	735	genome.wustl.edu	37	5	39289024	39289024	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	39289024	39289024	C	A	SNP	C9	NM_001737	human	genbank	57_37b	-1	reviewed	silent	c.1446	p.V482	0.958	HMMPfam_MACPF,HMMSmart_MACPF	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_Ldl_recept_a,superfamily_LDL_rcpt_classA_cys-rich,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMPfam_MACPF,HMMSmart_MACPF,PatternScan_MAC_PERFORIN,superfamily_SSF57196,PatternScan_EGF_2,PatternScan_EGF_1	-	no_errors	
CACNA1D	776	genome.wustl.edu	37	3	53844164	53844164	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	53844164	53844164	C	T	SNP	CACNA1D	NM_000720	human	genbank	57_37b	+1	validated	nonsense	c.6091	p.Q2031*	1.000	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CCDC155	147872	genome.wustl.edu	37	19	49920669	49920669	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49920669	49920669	C	A	SNP	CCDC155	NM_144688	human	genbank	57_37b	+1	provisional	missense	c.1591	p.L531M	0.999	NULL	NULL	-	no_errors	
CCDC155	147872	genome.wustl.edu	37	19	49920669	49920669	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49920669	49920669	C	A	SNP	CCDC155	NM_144688	human	genbank	57_37b	+1	provisional	missense	c.1591	p.L531M	0.999	NULL	NULL	-	no_errors	
CDH24	64403	genome.wustl.edu	37	14	23519130	23519130	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23519130	23519130	G	A	SNP	CDH24	NM_022478	human	genbank	57_37b	-1	validated	silent	c.1500	p.R500	0.002	HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CEP250	11190	genome.wustl.edu	37	20	34061226	34061226	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	34061226	34061226	C	G	SNP	CEP250	NM_007186	human	genbank	57_37b	+1	reviewed	missense	c.1237	p.Q413E	0.996	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	
CEP250	11190	genome.wustl.edu	37	20	34061226	34061226	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	34061226	34061226	C	G	SNP	CEP250	NM_007186	human	genbank	57_37b	+1	reviewed	missense	c.1237	p.Q413E	0.996	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	
CLASP2	23122	genome.wustl.edu	37	3	33759390	33759390	+	Silent	SNP	G	C	C	rs115396290	by1000genomes	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	33759390	33759390	G	C	SNP	CLASP2	NM_015097	human	genbank	57_37b	-1	validated	silent	c.105	p.P35	0.013	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-		
CLASP2	23122	genome.wustl.edu	37	3	33759390	33759390	+	Silent	SNP	G	G	C	rs115396290	by1000genomes	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	33759390	33759390	G	C	SNP	CLASP2	NM_015097	human	genbank	57_37b	-1	validated	silent	c.105	p.P35	0.013	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-		
DOPEY2	9980	genome.wustl.edu	37	21	37618234	37618234	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	37618234	37618234	G	A	SNP	DOPEY2	NM_005128	human	genbank	57_37b	+1	validated	missense	c.3956	p.C1319Y	1.000	NULL	HMMPfam_Dopey_N	-	no_errors	
DPEP1	1800	genome.wustl.edu	37	16	89702958	89702958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	89702958	89702958	C	T	SNP	DPEP1	NM_001128141	human	genbank	57_37b	+1	validated	missense	c.388	p.R130W	0.746	superfamily_SSF51556,HMMPfam_Peptidase_M19	superfamily_SSF51556,HMMPfam_Peptidase_M19,PatternScan_RENAL_DIPEPTIDASE_1	-	no_errors	
DPEP1	1800	genome.wustl.edu	37	16	89702958	89702958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	89702958	89702958	C	T	SNP	DPEP1	NM_001128141	human	genbank	57_37b	+1	validated	missense	c.388	p.R130W	0.746	superfamily_SSF51556,HMMPfam_Peptidase_M19	superfamily_SSF51556,HMMPfam_Peptidase_M19,PatternScan_RENAL_DIPEPTIDASE_1	-	no_errors	
ENSG00000198923	0	genome.wustl.edu	37	12	76358765	76358765	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	76358765	76358765	G	A	SNP	ENSG00000198923	ENST00000361500	human	ensembl	57_37b	+1	known	silent	c.183	p.P61	0.000	NULL	HMMPfam_Nop10p	-	no_errors	
ENSG00000247165	0	genome.wustl.edu	37	19	6190819	6190819	+	RNA	SNP	T	T	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6190819	6190819	T	C	SNP	ENSG00000247165	ENST00000502114	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
EPHA2	1969	genome.wustl.edu	37	1	16464453	16464453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16464453	16464453	C	T	SNP	EPHA2	NM_004431	human	genbank	57_37b	-1	reviewed	missense	c.1207	p.E403K	1.000	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	superfamily_Gal_bind_like,HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,superfamily_Grow_fac_recept,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-	no_errors	
EXOC2	55770	genome.wustl.edu	37	6	564578	564578	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	564578	564578	C	A	SNP	EXOC2	NM_018303	human	genbank	57_37b	-1	reviewed	missense	c.1634	p.G545V	0.997	NULL	superfamily_Ig_E-set,HMMPfam_TIG	-	no_errors	
F2	2147	genome.wustl.edu	37	11	46741275	46741275	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	46741275	46741275	C	G	SNP	F2	NM_000506	human	genbank	57_37b	+1	reviewed	missense	c.103	p.R35G	0.000	HMMSmart_GLA	HMMSmart_GLA,superfamily_VitK_dep_GLA,HMMPfam_Gla,PatternScan_GLA_1,HMMSmart_KR,HMMPfam_Kringle,superfamily_Kringle-like,PatternScan_KRINGLE_1,HMMPfam_Thrombin_light,superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
FAM184A	79632	genome.wustl.edu	37	6	119345581	119345581	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	119345581	119345581	G	T	SNP	FAM184A	NM_024581	human	genbank	57_37b	-1	validated	missense	c.557	p.A186E	0.998	NULL	NULL	-	no_errors	
FBXL17	64839	genome.wustl.edu	37	5	107216863	107216863	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	107216863	107216863	G	A	SNP	FBXL17	ENST00000496714	human	ensembl	57_37b	-1	known	nonsense	c.646	p.R216*	1.000	superfamily_SSF52047	superfamily_SSF52047	-	no_errors	
GLRA3	8001	genome.wustl.edu	37	4	175565062	175565062	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	175565062	175565062	G	A	SNP	GLRA3	NM_006529	human	genbank	57_37b	-1	validated	missense	c.1270	p.R424W	0.980	superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors	
GPR20	2843	genome.wustl.edu	37	8	142367400	142367400	+	Silent	SNP	G	A	A	rs11167054	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	142367400	142367400	G	A	SNP	GPR20	NM_005293	human	genbank	57_37b	-1	validated	silent	c.624	p.P208	0.037	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
GPR20	2843	genome.wustl.edu	37	8	142367400	142367400	+	Silent	SNP	G	A	A	rs11167054	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	142367400	142367400	G	A	SNP	GPR20	NM_005293	human	genbank	57_37b	-1	validated	silent	c.624	p.P208	0.037	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
GPR98	84059	genome.wustl.edu	37	5	90052933	90052933	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	90052933	90052933	A	C	SNP	GPR98	NM_032119	human	genbank	57_37b	+1	reviewed	missense	c.11895	p.E3965D	1.000	HMMSmart_SM00237	HMMSmart_SM00237,HMMPfam_Calx-beta,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EPTP,PatternScan_A_DEAMINASE,PatternScan_LIPOYL,HMMPfam_GPS	-	no_errors	
GPR98	84059	genome.wustl.edu	37	5	90052933	90052933	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	90052933	90052933	A	C	SNP	GPR98	NM_032119	human	genbank	57_37b	+1	reviewed	missense	c.11895	p.E3965D	1.000	HMMSmart_SM00237	HMMSmart_SM00237,HMMPfam_Calx-beta,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EPTP,PatternScan_A_DEAMINASE,PatternScan_LIPOYL,HMMPfam_GPS	-	no_errors	
GTPBP4	23560	genome.wustl.edu	37	10	1038429	1038429	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	1038429	1038429	G	T	SNP	GTPBP4	NM_012341	human	genbank	57_37b	+1	reviewed	missense	c.49	p.D17Y	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NOG1,HMMPfam_NOGCT	-	no_errors	
KCNH2	3757	genome.wustl.edu	37	7	150648593	150648593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150648593	150648593	C	T	SNP	KCNH2	NM_000238	human	genbank	57_37b	-1	reviewed	missense	c.1888	p.V630I	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS,HMMSmart_SM00086,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	-	no_errors	
KCNH2	3757	genome.wustl.edu	37	7	150648593	150648593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150648593	150648593	C	T	SNP	KCNH2	NM_000238	human	genbank	57_37b	-1	reviewed	missense	c.1888	p.V630I	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS,HMMSmart_SM00086,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	-	no_errors	
KIAA1191	57179	genome.wustl.edu	37	5	175782743	175782743	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	175782743	175782743	G	C	SNP	KIAA1191	NM_001079685	human	genbank	57_37b	-1	validated	missense	c.38	p.A13G	0.391	NULL	NULL	-	no_errors	
MEGF11	84465	genome.wustl.edu	37	15	66209156	66209156	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	66209156	66209156	T	G	SNP	MEGF11	ENST00000360698	human	ensembl	57_37b	-1	known	missense	c.2225	p.H742P	0.540	NULL	HMMPfam_EMI,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,HMMPfam_EGF_2,superfamily_SSF57196	-	no_errors	
MGAT5B	146664	genome.wustl.edu	37	17	74902269	74902269	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74902269	74902269	G	A	SNP	MGAT5B	NM_198955	human	genbank	57_37b	+1	validated	missense	c.1058	p.S353N	1.000	NULL	NULL	-	no_errors	
MGAT5B	146664	genome.wustl.edu	37	17	74902269	74902269	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74902269	74902269	G	A	SNP	MGAT5B	NM_198955	human	genbank	57_37b	+1	validated	missense	c.1058	p.S353N	1.000	NULL	NULL	-	no_errors	
MYLK2	85366	genome.wustl.edu	37	20	30414482	30414482	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30414482	30414482	C	T	SNP	MYLK2	NM_033118	human	genbank	57_37b	+1	reviewed	silent	c.1047	p.I349	0.840	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
NHSL2	340527	genome.wustl.edu	37	X	71359966	71359968	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	71359966	71359968	AGA	-	DEL	NHSL2	NM_001013627	human	genbank	57_37b	+1	provisional	in_frame_del	c.1470_1472	p.E492in_frame_del	0.005:0.010:0.004	NULL	NULL	(deletion:cds_exon[71358497,71360626])	no_errors	
NPAS4	266743	genome.wustl.edu	37	11	66192244	66192244	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66192244	66192244	A	G	SNP	NPAS4	NM_178864	human	genbank	57_37b	+1	validated	missense	c.1883	p.E628G	1.000	NULL	HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS_3	-	no_errors	
NPAS4	266743	genome.wustl.edu	37	11	66192244	66192244	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66192244	66192244	A	G	SNP	NPAS4	NM_178864	human	genbank	57_37b	+1	validated	missense	c.1883	p.E628G	1.000	NULL	HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS_3	-	no_errors	
ODZ2	57451	genome.wustl.edu	37	5	167626024	167626024	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	167626024	167626024	G	C	SNP	ODZ2	NM_001122679	human	genbank	57_37b	+1	inferred	missense	c.3040	p.G1014R	1.000	superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_Ten_N,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Carboxypeptidase regulatory domain,superfamily_NHL repeat,HMMPfam_NHL,HMMPfam_RHS_repeat	-	no_errors	
OR14C36	127066	genome.wustl.edu	37	1	248512348	248512348	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248512348	248512348	C	A	SNP	OR14C36	NM_001001918	human	genbank	57_37b	+1	provisional	missense	c.272	p.S91Y	0.310	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
PDHB	5162	genome.wustl.edu	37	3	58413894	58413894	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	58413894	58413894	T	G	SNP	PDHB	NM_000925	human	genbank	57_37b	-1	validated	missense	c.947	p.N316T	1.000	superfamily_TK C-terminal domain-like,HMMPfam_Transketolase_C	superfamily_Thiamin diphosphate-binding fold (THDP-binding),HMMPfam_Transket_pyr,superfamily_TK C-terminal domain-like,HMMPfam_Transketolase_C	-	no_errors	
PDHB	5162	genome.wustl.edu	37	3	58413894	58413894	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	58413894	58413894	T	G	SNP	PDHB	NM_000925	human	genbank	57_37b	-1	validated	missense	c.947	p.N316T	1.000	superfamily_TK C-terminal domain-like,HMMPfam_Transketolase_C	superfamily_Thiamin diphosphate-binding fold (THDP-binding),HMMPfam_Transket_pyr,superfamily_TK C-terminal domain-like,HMMPfam_Transketolase_C	-	no_errors	
PHF16	9767	genome.wustl.edu	37	X	46887292	46887292	+	Splice_Site	DEL	A	A	-	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	46887292	46887292	A	-	DEL	PHF16	NM_001077445	human	genbank	57_37b	+1	reviewed	splice_site_del	c.476-2	e5-2	1.000	-	-	(deletion:intron[46884317,46887293])	no_errors	
PHF16	9767	genome.wustl.edu	37	X	46887292	46887292	+	Splice_Site	DEL	A	A	-	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	46887292	46887292	A	-	DEL	PHF16	NM_001077445	human	genbank	57_37b	+1	reviewed	splice_site_del	c.476-2	e5-2	1.000	-	-	(deletion:intron[46884317,46887293])	no_errors	
PLEC	0	genome.wustl.edu	37	8	145004699	145004699	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145004699	145004699	C	T	SNP	PLEC	NM_201380	human	genbank	57_37b	-1	reviewed	silent	c.2721	p.E907	1.000	superfamily_Spectrin repeat,HMMSmart_SM00150	HMMPfam_S10_plectin,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	-	no_errors	
PNPLA8	50640	genome.wustl.edu	37	7	108155517	108155517	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	108155517	108155517	G	C	SNP	PNPLA8	NM_015723	human	genbank	57_37b	-1	provisional	missense	c.419	p.S140W	0.245	superfamily_ARM repeat	superfamily_ARM repeat,superfamily_FabD/lysophospholipase-like,HMMPfam_Patatin	-	no_errors	
PPP2R5B	5526	genome.wustl.edu	37	11	64699064	64699064	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64699064	64699064	A	G	SNP	PPP2R5B	NM_006244	human	genbank	57_37b	+1	reviewed	missense	c.979	p.T327A	1.000	HMMPfam_B56	HMMPfam_B56	-	no_errors	
PRKCE	5581	genome.wustl.edu	37	2	46207466	46207466	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	46207466	46207466	C	T	SNP	PRKCE	NM_005400	human	genbank	57_37b	+1	reviewed	silent	c.639	p.H213	0.944	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C	-	no_errors	
PTPRD	5789	genome.wustl.edu	37	9	8500901	8500901	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	8500901	8500901	C	A	SNP	PTPRD	NM_002839	human	genbank	57_37b	-1	reviewed	nonsense	c.1981	p.E661*	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
PTPRD	5789	genome.wustl.edu	37	9	8500901	8500901	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	8500901	8500901	C	A	SNP	PTPRD	NM_002839	human	genbank	57_37b	-1	reviewed	nonsense	c.1981	p.E661*	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
RAB3GAP2	25782	genome.wustl.edu	37	1	220359016	220359016	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220359016	220359016	A	G	SNP	RAB3GAP2	NM_012414	human	genbank	57_37b	-1	reviewed	missense	c.1847	p.L616S	0.560	NULL	NULL	-	no_errors	
RAB3GAP2	25782	genome.wustl.edu	37	1	220359016	220359016	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220359016	220359016	A	G	SNP	RAB3GAP2	NM_012414	human	genbank	57_37b	-1	reviewed	missense	c.1847	p.L616S	0.560	NULL	NULL	-	no_errors	
REXO2	25996	genome.wustl.edu	37	11	114318554	114318554	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	114318554	114318554	G	C	SNP	REXO2	NM_015523	human	genbank	57_37b	+1	validated	missense	c.537	p.W179C	1.000	superfamily_Ribonuclease H-like,HMMSmart_SM00479,HMMPfam_Exonuc_X-T	superfamily_Ribonuclease H-like,HMMSmart_SM00479,HMMPfam_Exonuc_X-T	-	no_errors	
SCAI	286205	genome.wustl.edu	37	9	127781175	127781175	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	127781175	127781175	C	T	SNP	SCAI	NM_173690	human	genbank	57_37b	-1	reviewed	missense	c.833	p.R278H	1.000	NULL	NULL	-	no_errors	
SCAI	286205	genome.wustl.edu	37	9	127781175	127781175	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	127781175	127781175	C	T	SNP	SCAI	NM_173690	human	genbank	57_37b	-1	reviewed	missense	c.833	p.R278H	1.000	NULL	NULL	-	no_errors	
SCN1A	6323	genome.wustl.edu	37	2	166854657	166854657	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	166854657	166854657	C	T	SNP	SCN1A	NM_006920	human	genbank	57_37b	-1	reviewed	missense	c.4334	p.S1445N	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_IQ,HMMPfam_IQ,PatternScan_RIBONUCLEASE_P	-	no_errors	
SCN1A	6323	genome.wustl.edu	37	2	166854657	166854657	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	166854657	166854657	C	T	SNP	SCN1A	NM_006920	human	genbank	57_37b	-1	reviewed	missense	c.4334	p.S1445N	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_IQ,HMMPfam_IQ,PatternScan_RIBONUCLEASE_P	-	no_errors	
SLC10A3	8273	genome.wustl.edu	37	X	153715914	153715914	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153715914	153715914	C	T	SNP	SLC10A3	NM_001142392	human	genbank	57_37b	-1	reviewed	missense	c.1366	p.G456S	1.000	NULL	HMMPfam_SBF	-	no_errors	
SLC10A3	8273	genome.wustl.edu	37	X	153715914	153715914	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153715914	153715914	C	T	SNP	SLC10A3	NM_001142392	human	genbank	57_37b	-1	reviewed	missense	c.1366	p.G456S	1.000	NULL	HMMPfam_SBF	-	no_errors	
SLC37A1	54020	genome.wustl.edu	37	21	43984830	43984831	+	Frame_Shift_Ins	INS	-	-	AG	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	43984830	43984831	-	AG	INS	SLC37A1	NM_018964	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.1148_1149	p.G384fs	1.000:0.864	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	-	no_errors	
SORCS1	114815	genome.wustl.edu	37	10	108380241	108380241	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	108380241	108380241	C	T	SNP	SORCS1	NM_001013031	human	genbank	57_37b	-1	reviewed	nonsense	c.2741	p.W914*	1.000	HMMSmart_PKD	superfamily_SSF110296,HMMSmart_VPS10,HMMSmart_PKD,superfamily_PKD,HMMPfam_PKD	-	no_errors	
SRGN	5552	genome.wustl.edu	37	10	70863653	70863653	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	70863653	70863653	G	A	SNP	SRGN	NM_002727	human	genbank	57_37b	+1	reviewed	missense	c.254	p.R85H	0.005	HMMPfam_Serglycin	HMMPfam_Serglycin	-	no_errors	
SSPO	23145	genome.wustl.edu	37	7	149486294	149486294	+	Missense_Mutation	SNP	A	A	G	rs855691	byCluster;byFrequency;by1000genomes	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149486294	149486294	A	G	SNP	SSPO	ENST00000378016	human	ensembl	57_37b	+1	known	missense	c.4270	p.S1424G	0.626	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_VWC,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_BPTI_KUNITZ_1,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_EGF_1,PatternScan_VWFC_1	-		
SSPO	23145	genome.wustl.edu	37	7	149486294	149486294	+	Missense_Mutation	SNP	A	A	G	rs855691	byCluster;byFrequency;by1000genomes	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149486294	149486294	A	G	SNP	SSPO	ENST00000378016	human	ensembl	57_37b	+1	known	missense	c.4270	p.S1424G	0.626	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_VWC,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_BPTI_KUNITZ_1,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_EGF_1,PatternScan_VWFC_1	-		
SYT10	341359	genome.wustl.edu	37	12	33538115	33538115	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	33538115	33538115	C	T	SNP	SYT10	NM_198992	human	genbank	57_37b	-1	provisional	missense	c.1189	p.G397S	1.000	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors	
TACC2	10579	genome.wustl.edu	37	10	123845245	123845245	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	123845245	123845245	C	T	SNP	TACC2	NM_206862	human	genbank	57_37b	+1	reviewed	missense	c.3230	p.P1077L	0.693	NULL	HMMPfam_TACC	-	no_errors	
TAOK3	51347	genome.wustl.edu	37	12	118619174	118619174	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	118619174	118619174	A	C	SNP	TAOK3	NM_016281	human	genbank	57_37b	-1	validated	splice_site	c.1566+2	e13+2	1.000	-	-	-	no_errors	
TAOK3	51347	genome.wustl.edu	37	12	118619174	118619174	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	118619174	118619174	A	C	SNP	TAOK3	NM_016281	human	genbank	57_37b	-1	validated	splice_site	c.1566+2	e13+2	1.000	-	-	-	no_errors	
TBC1D8B	54885	genome.wustl.edu	37	X	106069421	106069421	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	106069421	106069421	C	A	SNP	TBC1D8B	NM_017752	human	genbank	57_37b	+1	validated	missense	c.989	p.A330D	1.000	HMMPfam_GRAM,HMMSmart_SM00568	HMMPfam_GRAM,HMMSmart_SM00568,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164,superfamily_EF-hand,PatternScan_EF_HAND_1	-	no_errors	
TREM1	54210	genome.wustl.edu	37	6	41243963	41243963	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	41243963	41243963	G	A	SNP	TREM1	NM_018643	human	genbank	57_37b	-1	provisional	missense	c.605	p.P202L	0.003	NULL	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409	-	no_errors	
TTC9C	283237	genome.wustl.edu	37	11	62502958	62502958	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62502958	62502958	G	A	SNP	TTC9C	NM_173810	human	genbank	57_37b	+1	provisional	missense	c.343	p.G115R	1.000	superfamily_TPR-like,HMMPfam_TPR_2,HMMSmart_SM00028	HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1,HMMPfam_TPR_2	-	no_errors	
TUB	7275	genome.wustl.edu	37	11	8122413	8122413	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	8122413	8122413	C	T	SNP	TUB	NM_003320	human	genbank	57_37b	+1	reviewed	missense	c.1421	p.T474M	1.000	superfamily_Tubby_C,HMMPfam_Tub	superfamily_Tubby_C,HMMPfam_Tub,PatternScan_TUB_1,PatternScan_TUB_2	-	no_errors	
TUB	7275	genome.wustl.edu	37	11	8122413	8122413	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	8122413	8122413	C	T	SNP	TUB	NM_003320	human	genbank	57_37b	+1	reviewed	missense	c.1421	p.T474M	1.000	superfamily_Tubby_C,HMMPfam_Tub	superfamily_Tubby_C,HMMPfam_Tub,PatternScan_TUB_1,PatternScan_TUB_2	-	no_errors	
WIZ	58525	genome.wustl.edu	37	19	15559079	15559079	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	15559079	15559079	G	C	SNP	WIZ	NM_021241	human	genbank	57_37b	-1	validated	missense	c.40	p.R14G	0.658	NULL	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
WNK3	65267	genome.wustl.edu	37	X	54224848	54224848	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54224848	54224848	G	A	SNP	WNK3	NM_020922	human	genbank	57_37b	-1	validated	missense	c.5312	p.S1771F	0.693	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
WNK3	65267	genome.wustl.edu	37	X	54224848	54224848	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54224848	54224848	G	A	SNP	WNK3	NM_020922	human	genbank	57_37b	-1	validated	missense	c.5312	p.S1771F	0.693	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
ZAK	51776	genome.wustl.edu	37	2	174131293	174131293	+	Missense_Mutation	SNP	C	C	T	rs56202258	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	174131293	174131293	C	T	SNP	ZAK	NM_016653	human	genbank	57_37b	+1	reviewed	missense	c.2218	p.P740S	0.695	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-		
ZAK	51776	genome.wustl.edu	37	2	174131293	174131293	+	Missense_Mutation	SNP	C	C	T	rs56202258	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	174131293	174131293	C	T	SNP	ZAK	NM_016653	human	genbank	57_37b	+1	reviewed	missense	c.2218	p.P740S	0.695	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-		
ZNF10	7556	genome.wustl.edu	37	12	133733175	133733175	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	133733175	133733175	T	-	DEL	ZNF10	NM_015394	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1343	p.Y449fs	0.989	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	(deletion:cds_exon[133732089,133733554])	no_errors	
ZNF10	7556	genome.wustl.edu	37	12	133733175	133733175	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	133733175	133733175	T	-	DEL	ZNF10	NM_015394	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1343	p.Y449fs	0.989	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	(deletion:cds_exon[133732089,133733554])	no_errors	
ZNF214	7761	genome.wustl.edu	37	11	7021109	7021109	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15A-01A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	7021109	7021109	C	A	SNP	ZNF214	NM_013249	human	genbank	57_37b	-1	validated	missense	c.1805	p.R602I	0.460	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355	-	no_errors	
ZNF271	10778	genome.wustl.edu	37	18	32887278	32887278	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A15A-06A-11D-A12B-09	TCGA-E2-A15A-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	32887278	32887278	T	C	SNP	ZNF271	ENST00000399070	human	ensembl	57_37b	+1	known	silent	c.690	p.P230	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
