Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ACTN2	88	genome.wustl.edu	37	1	236883433	236883433	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236883433	236883433	C	A	SNP	ACTN2	NM_001103	human	genbank	57_37b	+1	reviewed	silent	c.390	p.T130	0.981	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,PatternScan_ACTININ_2	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,HMMPfam_efhand_Ca_insen	-	no_errors	
ACTN2	88	genome.wustl.edu	37	1	236883433	236883433	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236883433	236883433	C	A	SNP	ACTN2	NM_001103	human	genbank	57_37b	+1	reviewed	silent	c.390	p.T130	0.981	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,PatternScan_ACTININ_2	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,HMMPfam_efhand_Ca_insen	-	no_errors	
ALOX12B	242	genome.wustl.edu	37	17	7980404	7980404	+	Silent	SNP	G	G	A	rs112835279	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7980404	7980404	G	A	SNP	ALOX12B	NM_001139	human	genbank	57_37b	-1	reviewed	silent	c.1179	p.H393	0.984	superfamily_Lipoxygenase,HMMPfam_Lipoxygenase,PatternScan_LIPOXYGENASE_1	HMMPfam_PLAT,HMMSmart_LH2,superfamily_Lipase_LipOase,superfamily_Lipoxygenase,HMMPfam_Lipoxygenase,PatternScan_LIPOXYGENASE_1,PatternScan_LIPOXYGENASE_2	-		
ALOX12B	242	genome.wustl.edu	37	17	7980404	7980404	+	Silent	SNP	G	G	A	rs112835279	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7980404	7980404	G	A	SNP	ALOX12B	NM_001139	human	genbank	57_37b	-1	reviewed	silent	c.1179	p.H393	0.984	superfamily_Lipoxygenase,HMMPfam_Lipoxygenase,PatternScan_LIPOXYGENASE_1	HMMPfam_PLAT,HMMSmart_LH2,superfamily_Lipase_LipOase,superfamily_Lipoxygenase,HMMPfam_Lipoxygenase,PatternScan_LIPOXYGENASE_1,PatternScan_LIPOXYGENASE_2	-		
C14orf145	145508	genome.wustl.edu	37	14	81382827	81382827	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	81382827	81382827	G	T	SNP	C14orf145	NM_152446	human	genbank	57_37b	-1	validated	missense	c.65	p.A22D	0.699	NULL	NULL	-	no_errors	
C14orf145	145508	genome.wustl.edu	37	14	81382827	81382827	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	81382827	81382827	G	T	SNP	C14orf145	NM_152446	human	genbank	57_37b	-1	validated	missense	c.65	p.A22D	0.699	NULL	NULL	-	no_errors	
C19orf25	148223	genome.wustl.edu	37	19	1475137	1475137	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1475137	1475137	C	G	SNP	C19orf25	NM_152482	human	genbank	57_37b	-1	validated	missense	c.251	p.R84T	0.000	NULL	NULL	-	no_errors	
C21orf119	84996	genome.wustl.edu	37	21	33765616	33765616	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	33765616	33765616	G	C	SNP	C21orf119	ENST00000448871	human	ensembl	57_37b	+1	known	missense	c.85	p.A29P	0.000	NULL	NULL	-	no_errors	
C21orf119	84996	genome.wustl.edu	37	21	33765616	33765616	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	33765616	33765616	G	C	SNP	C21orf119	ENST00000448871	human	ensembl	57_37b	+1	known	missense	c.85	p.A29P	0.000	NULL	NULL	-	no_errors	
CHI3L1	1116	genome.wustl.edu	37	1	203152855	203152855	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	203152855	203152855	G	C	SNP	CHI3L1	NM_001276	human	genbank	57_37b	-1	reviewed	missense	c.379	p.L127V	1.000	HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat	PatternScan_CHITINASE_18,HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat,superfamily_SSF54556	-	no_errors	
CHI3L1	1116	genome.wustl.edu	37	1	203152855	203152855	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	203152855	203152855	G	C	SNP	CHI3L1	NM_001276	human	genbank	57_37b	-1	reviewed	missense	c.379	p.L127V	1.000	HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat	PatternScan_CHITINASE_18,HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat,superfamily_SSF54556	-	no_errors	
CSPG4	1464	genome.wustl.edu	37	15	75969495	75969495	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75969495	75969495	C	T	SNP	CSPG4	NM_001897	human	genbank	57_37b	-1	reviewed	missense	c.5365	p.G1789S	0.870	NULL	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_ATPASE_ALPHA_BETA	-	no_errors	
DAPK1	1612	genome.wustl.edu	37	9	90266523	90266523	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	90266523	90266523	G	A	SNP	DAPK1	NM_004938	human	genbank	57_37b	+1	reviewed	missense	c.1708	p.V570I	0.012	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_SSF52540,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors	
DCLK1	9201	genome.wustl.edu	37	13	36700191	36700191	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	36700191	36700191	G	A	SNP	DCLK1	NM_004734	human	genbank	57_37b	-1	validated	silent	c.84	p.N28	0.956	NULL	superfamily_SSF89837,HMMSmart_DCX,HMMPfam_DCX,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
DGKG	1608	genome.wustl.edu	37	3	185960291	185960291	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	185960291	185960291	A	G	SNP	DGKG	NM_001346	human	genbank	57_37b	-1	reviewed	splice_site	c.1826+2	e19+2	1.000	-	-	-	no_errors	
DGKG	1608	genome.wustl.edu	37	3	185960291	185960291	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	185960291	185960291	A	G	SNP	DGKG	NM_001346	human	genbank	57_37b	-1	reviewed	splice_site	c.1826+2	e19+2	1.000	-	-	-	no_errors	
DHRS7C	201140	genome.wustl.edu	37	17	9680524	9680524	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	9680524	9680524	G	A	SNP	DHRS7C	NM_001105571	human	genbank	57_37b	-1	validated	missense	c.557	p.P186L	0.999	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short,PatternScan_ADH_SHORT	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short,PatternScan_ADH_SHORT	-	no_errors	
DSP	1832	genome.wustl.edu	37	6	7570674	7570674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	7570674	7570674	G	A	SNP	DSP	NM_004415	human	genbank	57_37b	+1	reviewed	missense	c.1579	p.E527K	1.000	superfamily_Spectrin repeat	superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	-	no_errors	
DSP	1832	genome.wustl.edu	37	6	7570674	7570674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	7570674	7570674	G	A	SNP	DSP	NM_004415	human	genbank	57_37b	+1	reviewed	missense	c.1579	p.E527K	1.000	superfamily_Spectrin repeat	superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	-	no_errors	
DYRK1A	1859	genome.wustl.edu	37	21	38884440	38884440	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	38884440	38884440	A	G	SNP	DYRK1A	NM_001396	human	genbank	57_37b	+1	reviewed	missense	c.1898	p.Y633C	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
DYRK1A	1859	genome.wustl.edu	37	21	38884440	38884440	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	38884440	38884440	A	G	SNP	DYRK1A	NM_001396	human	genbank	57_37b	+1	reviewed	missense	c.1898	p.Y633C	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
EED	8726	genome.wustl.edu	37	11	85961453	85961453	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	85961453	85961453	A	G	SNP	EED	NM_003797	human	genbank	57_37b	+1	reviewed	missense	c.230	p.K77R	1.000	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
EED	8726	genome.wustl.edu	37	11	85961453	85961453	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	85961453	85961453	A	G	SNP	EED	NM_003797	human	genbank	57_37b	+1	reviewed	missense	c.230	p.K77R	1.000	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
EFTUD2	9343	genome.wustl.edu	37	17	42929146	42929146	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	42929146	42929146	G	A	SNP	EFTUD2	NM_004247	human	genbank	57_37b	-1	validated	missense	c.2755	p.R919C	0.999	superfamily_EFG_III_V	PatternScan_EFACTOR_GTP,superfamily_SSF52540,HMMPfam_GTP_EFTU,superfamily_Translat_factor,HMMPfam_GTP_EFTU_D2,superfamily_EFG_III_V,superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_EFG_IV,HMMPfam_EFG_C	-	no_errors	
EFTUD2	9343	genome.wustl.edu	37	17	42929146	42929146	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	42929146	42929146	G	A	SNP	EFTUD2	NM_004247	human	genbank	57_37b	-1	validated	missense	c.2755	p.R919C	0.999	superfamily_EFG_III_V	PatternScan_EFACTOR_GTP,superfamily_SSF52540,HMMPfam_GTP_EFTU,superfamily_Translat_factor,HMMPfam_GTP_EFTU_D2,superfamily_EFG_III_V,superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_EFG_IV,HMMPfam_EFG_C	-	no_errors	
ENSG00000222806	0	genome.wustl.edu	37	6	153741613	153741613	+	RNA	SNP	G	G	C	rs270288	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	153741613	153741613	G	C	SNP	ENSG00000222806	ENST00000410874	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.032	-	-	-		
ENSG00000236623	0	genome.wustl.edu	37	10	42391485	42391485	+	RNA	SNP	G	G	A	rs78556608	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	42391485	42391485	G	A	SNP	ENSG00000236623	ENST00000423802	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.000	-	-	-		
ETS1	2113	genome.wustl.edu	37	11	128443000	128443000	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	128443000	128443000	C	T	SNP	ETS1	NM_001143820	human	genbank	57_37b	-1	validated	missense	c.26	p.G9E	0.000	NULL	superfamily_SAM_homology,HMMPfam_SAM_PNT,HMMSmart_SAM_PNT,superfamily_SSF46785,HMMPfam_Ets,HMMSmart_ETS,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2	-	no_errors	
ETS1	2113	genome.wustl.edu	37	11	128443000	128443000	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	128443000	128443000	C	T	SNP	ETS1	NM_001143820	human	genbank	57_37b	-1	validated	missense	c.26	p.G9E	0.000	NULL	superfamily_SAM_homology,HMMPfam_SAM_PNT,HMMSmart_SAM_PNT,superfamily_SSF46785,HMMPfam_Ets,HMMSmart_ETS,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2	-	no_errors	
FLRT1	23769	genome.wustl.edu	37	11	63884260	63884260	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	63884260	63884260	C	T	SNP	FLRT1	NM_013280	human	genbank	57_37b	+1	reviewed	missense	c.521	p.A174V	0.899	superfamily_L domain-like,HMMSmart_SM00369	superfamily_L domain-like,HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00364,HMMSmart_SM00082,HMMPfam_fn3	-	no_errors	
GAK	2580	genome.wustl.edu	37	4	860994	860994	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	860994	860994	A	G	SNP	GAK	NM_005255	human	genbank	57_37b	-1	validated	silent	c.2622	p.P874	0.003	NULL	PatternScan_PROTEIN_KINASE_ATP,PatternScan_DNAJ_1,superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,superfamily_SSF52799,HMMPfam_PTEN_C2,superfamily_C2_CaLB,superfamily_DnaJ_N,HMMSmart_DnaJ,HMMPfam_DnaJ	-	no_errors	
GPR61	83873	genome.wustl.edu	37	1	110086562	110086562	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	110086562	110086562	C	T	SNP	GPR61	NM_031936	human	genbank	57_37b	+1	validated	silent	c.918	p.F306	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
GPR61	83873	genome.wustl.edu	37	1	110086562	110086562	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	110086562	110086562	C	T	SNP	GPR61	NM_031936	human	genbank	57_37b	+1	validated	silent	c.918	p.F306	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
GRIN2B	2904	genome.wustl.edu	37	12	13906449	13906449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	13906449	13906449	G	A	SNP	GRIN2B	NM_000834	human	genbank	57_37b	-1	reviewed	missense	c.812	p.A271V	0.995	superfamily_SSF53822	superfamily_SSF53822,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C	-	no_errors	
GRIN2B	2904	genome.wustl.edu	37	12	13906449	13906449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	13906449	13906449	G	A	SNP	GRIN2B	NM_000834	human	genbank	57_37b	-1	reviewed	missense	c.812	p.A271V	0.995	superfamily_SSF53822	superfamily_SSF53822,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C	-	no_errors	
HLA-J	0	genome.wustl.edu	37	6	29974759	29974759	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29974759	29974759	C	T	SNP	HLA-J	ENST00000376791	human	ensembl	57_37b	+1	known	silent	c.247	p.L83	0.000	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain	-	no_errors	
KCNJ6	3763	genome.wustl.edu	37	21	39086565	39086565	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	39086565	39086565	T	C	SNP	KCNJ6	NM_002240	human	genbank	57_37b	-1	reviewed	missense	c.895	p.K299E	1.000	HMMPfam_IRK,superfamily_Ig_E-set	HMMPfam_IRK,superfamily_SSF81324,superfamily_Ig_E-set	-	no_errors	
KCNJ6	3763	genome.wustl.edu	37	21	39086565	39086565	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	39086565	39086565	T	C	SNP	KCNJ6	NM_002240	human	genbank	57_37b	-1	reviewed	missense	c.895	p.K299E	1.000	HMMPfam_IRK,superfamily_Ig_E-set	HMMPfam_IRK,superfamily_SSF81324,superfamily_Ig_E-set	-	no_errors	
LHFPL4	375323	genome.wustl.edu	37	3	9594129	9594129	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	9594129	9594129	C	G	SNP	LHFPL4	NM_198560	human	genbank	57_37b	-1	reviewed	missense	c.235	p.G79R	1.000	HMMPfam_L_HGMIC_fpl	HMMPfam_L_HGMIC_fpl	-	no_errors	
LHFPL4	375323	genome.wustl.edu	37	3	9594129	9594129	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	9594129	9594129	C	G	SNP	LHFPL4	NM_198560	human	genbank	57_37b	-1	reviewed	missense	c.235	p.G79R	1.000	HMMPfam_L_HGMIC_fpl	HMMPfam_L_HGMIC_fpl	-	no_errors	
LOC100289281	0	genome.wustl.edu	37	10	99531351	99531351	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	99531351	99531351	C	T	SNP	LOC100289281	XM_002343028	human	genbank	57_37b	+1	model	missense	c.601	p.L201F	1.000	NULL	NULL	-	no_errors	
MGA	23269	genome.wustl.edu	37	15	42032290	42032290	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	42032290	42032290	C	T	SNP	MGA	NM_001080541	human	genbank	57_37b	+1	validated	missense	c.4621	p.R1541C	1.000	NULL	superfamily_p53-like transcription factors,HMMSmart_SM00425,HMMPfam_T-box,PatternScan_TBOX_2,HMMPfam_HLH,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353	-	no_errors	
MGA	23269	genome.wustl.edu	37	15	42032290	42032290	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	42032290	42032290	C	T	SNP	MGA	NM_001080541	human	genbank	57_37b	+1	validated	missense	c.4621	p.R1541C	1.000	NULL	superfamily_p53-like transcription factors,HMMSmart_SM00425,HMMPfam_T-box,PatternScan_TBOX_2,HMMPfam_HLH,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353	-	no_errors	
MYH4	4622	genome.wustl.edu	37	17	10346782	10346782	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10346782	10346782	G	T	SNP	MYH4	NM_017533	human	genbank	57_37b	-1	validated	silent	c.5730	p.A1910	0.086	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
MYH4	4622	genome.wustl.edu	37	17	10346782	10346782	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10346782	10346782	G	T	SNP	MYH4	NM_017533	human	genbank	57_37b	-1	validated	silent	c.5730	p.A1910	0.086	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
NID1	4811	genome.wustl.edu	37	1	236141235	236141235	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236141235	236141235	T	G	SNP	NID1	NM_002508	human	genbank	57_37b	-1	reviewed	missense	c.3676	p.T1226P	1.000	superfamily_EGF/Laminin,HMMSmart_SM00181	HMMSmart_SM00539,HMMPfam_NIDO,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMSmart_SM00682,HMMPfam_G2F,superfamily_GFP-like,PatternScan_EGF_CA,HMMPfam_EGF_CA,superfamily_Thyroglobulin type-1 domain,HMMPfam_Thyroglobulin_1,PatternScan_THYROGLOBULIN_1_1,HMMSmart_SM00211,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,PatternScan_EGF_1	-	no_errors	
NR1H2	7376	genome.wustl.edu	37	19	50885244	50885244	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50885244	50885244	A	T	SNP	NR1H2	NM_007121	human	genbank	57_37b	+1	validated	missense	c.1049	p.N350I	1.000	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
NR1H2	7376	genome.wustl.edu	37	19	50885244	50885244	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50885244	50885244	A	T	SNP	NR1H2	NM_007121	human	genbank	57_37b	+1	validated	missense	c.1049	p.N350I	1.000	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
PCDHA1	56147	genome.wustl.edu	37	5	140167773	140167773	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140167773	140167773	C	T	SNP	PCDHA1	NM_018900	human	genbank	57_37b	+1	reviewed	missense	c.1898	p.T633M	0.994	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHA1	56147	genome.wustl.edu	37	5	140167773	140167773	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140167773	140167773	C	T	SNP	PCDHA1	NM_018900	human	genbank	57_37b	+1	reviewed	missense	c.1898	p.T633M	0.994	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGB2	56103	genome.wustl.edu	37	5	140741005	140741005	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140741005	140741005	A	G	SNP	PCDHGB2	NM_018923	human	genbank	57_37b	+1	reviewed	missense	c.1303	p.S435G	0.806	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGB2	56103	genome.wustl.edu	37	5	140741005	140741005	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140741005	140741005	A	G	SNP	PCDHGB2	NM_018923	human	genbank	57_37b	+1	reviewed	missense	c.1303	p.S435G	0.806	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PPL	5493	genome.wustl.edu	37	16	4947750	4947750	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4947750	4947750	C	T	SNP	PPL	NM_002705	human	genbank	57_37b	-1	reviewed	missense	c.898	p.A300T	0.998	HMMSmart_SM00150,superfamily_Spectrin repeat	HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	-	no_errors	
PRKCZ	5590	genome.wustl.edu	37	1	2103803	2103803	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	2103803	2103803	G	A	SNP	PRKCZ	NM_002744	human	genbank	57_37b	+1	reviewed	missense	c.1261	p.E421K	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_SSF54277,HMMPfam_PB1,HMMSmart_PB1,superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors	
PVRL1	5818	genome.wustl.edu	37	11	119535677	119535678	+	In_Frame_Ins	INS	-	-	CCT	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	119535677	119535678	-	CCT	INS	PVRL1	NM_002855	human	genbank	57_37b	-1	reviewed	in_frame_ins	c.1334_1333	p.445in_frame_insE	0.902:0.989	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_C2-set_2,HMMPfam_ig	-	no_errors	
SHROOM2	357	genome.wustl.edu	37	X	9905362	9905362	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	9905362	9905362	G	A	SNP	SHROOM2	NM_001649	human	genbank	57_37b	+1	reviewed	missense	c.3776	p.R1259H	1.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_ASD1,HMMPfam_ASD2	-	no_errors	
SHROOM2	357	genome.wustl.edu	37	X	9905362	9905362	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	9905362	9905362	G	A	SNP	SHROOM2	NM_001649	human	genbank	57_37b	+1	reviewed	missense	c.3776	p.R1259H	1.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_ASD1,HMMPfam_ASD2	-	no_errors	
SRP72	6731	genome.wustl.edu	37	4	57357604	57357604	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	57357604	57357604	A	-	DEL	SRP72	NM_006947	human	genbank	57_37b	+1	validated	frame_shift_del	c.1510	p.K504fs	1.000	NULL	superfamily_SSF48452,HMMPfam_TPR_1,HMMPfam_SRP72	(deletion:cds_exon[57357597,57357734])	no_errors	
SRP72	6731	genome.wustl.edu	37	4	57357604	57357604	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	57357604	57357604	A	-	DEL	SRP72	NM_006947	human	genbank	57_37b	+1	validated	frame_shift_del	c.1510	p.K504fs	1.000	NULL	superfamily_SSF48452,HMMPfam_TPR_1,HMMPfam_SRP72	(deletion:cds_exon[57357597,57357734])	no_errors	
TEX15	56154	genome.wustl.edu	37	8	30695338	30695338	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	30695338	30695338	C	G	SNP	TEX15	NM_031271	human	genbank	57_37b	-1	validated	missense	c.7313	p.R2438T	0.000	NULL	NULL	-	no_errors	
TEX15	56154	genome.wustl.edu	37	8	30695338	30695338	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	30695338	30695338	C	G	SNP	TEX15	NM_031271	human	genbank	57_37b	-1	validated	missense	c.7313	p.R2438T	0.000	NULL	NULL	-	no_errors	
TEX15	56154	genome.wustl.edu	37	8	30695447	30695447	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	30695447	30695447	C	G	SNP	TEX15	NM_031271	human	genbank	57_37b	-1	validated	missense	c.7204	p.E2402Q	0.003	NULL	NULL	-	no_errors	
TEX15	56154	genome.wustl.edu	37	8	30695512	30695512	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	30695512	30695512	C	A	SNP	TEX15	NM_031271	human	genbank	57_37b	-1	validated	missense	c.7139	p.R2380I	0.061	NULL	NULL	-	no_errors	
TMEM117	84216	genome.wustl.edu	37	12	44238679	44238679	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	44238679	44238679	C	T	SNP	TMEM117	NM_032256	human	genbank	57_37b	+1	provisional	silent	c.225	p.A75	1.000	NULL	NULL	-	no_errors	
TMEM117	84216	genome.wustl.edu	37	12	44238679	44238679	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	44238679	44238679	C	T	SNP	TMEM117	NM_032256	human	genbank	57_37b	+1	provisional	silent	c.225	p.A75	1.000	NULL	NULL	-	no_errors	
TNN	63923	genome.wustl.edu	37	1	175048679	175048679	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	175048679	175048679	G	A	SNP	TNN	NM_022093	human	genbank	57_37b	+1	validated	missense	c.620	p.S207N	1.000	HMMSmart_SM00181,HMMPfam_EGF_2,superfamily_EGF/Laminin	PatternScan_EGF_1,HMMSmart_SM00181,HMMPfam_EGF_2,superfamily_EGF/Laminin,PatternScan_EGF_2,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578271	7578271	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578271	7578271	T	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.578	p.H193R	0.998	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578271	7578271	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578271	7578271	T	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.578	p.H193R	0.998	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TSEN15	116461	genome.wustl.edu	37	1	184023924	184023924	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	184023924	184023924	G	T	SNP	TSEN15	NM_052965	human	genbank	57_37b	+1	validated	missense	c.280	p.G94C	0.911	HMMPfam_Sen15	HMMPfam_Sen15	-	no_errors	
TSEN15	116461	genome.wustl.edu	37	1	184023924	184023924	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	184023924	184023924	G	T	SNP	TSEN15	NM_052965	human	genbank	57_37b	+1	validated	missense	c.280	p.G94C	0.911	HMMPfam_Sen15	HMMPfam_Sen15	-	no_errors	
WNT7A	7476	genome.wustl.edu	37	3	13860785	13860785	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-01A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	13860785	13860785	C	T	SNP	WNT7A	NM_004625	human	genbank	57_37b	-1	reviewed	missense	c.706	p.V236I	0.994	HMMPfam_wnt,HMMSmart_SM00097	HMMPfam_wnt,HMMSmart_SM00097,PatternScan_WNT1	-	no_errors	
WNT7A	7476	genome.wustl.edu	37	3	13860785	13860785	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A15E-06A-11D-A12B-09	TCGA-E2-A15E-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	13860785	13860785	C	T	SNP	WNT7A	NM_004625	human	genbank	57_37b	-1	reviewed	missense	c.706	p.V236I	0.994	HMMPfam_wnt,HMMSmart_SM00097	HMMPfam_wnt,HMMSmart_SM00097,PatternScan_WNT1	-	no_errors	
