Summary: Broad GDAC Ingested TCGA Data

Summary of TCGA Tumor Data
Ingested into Broad GDAC Pipeline
2012_08_25 stddata Run

Tumor	BCR	Clinical	CN	LowP	Methylation	mRNA	mRNAseq	miR	miRseq	RPPA	MAF

BLCA	126	68	88	0	78	0	85	0	88	0	28
BRCA	914	865	855	0	858	529	805	0	809	408	507
CESC	122	32	102	0	0	0	0	0	42	0	36
COADREAD	592	591	575	104	584	224	83	0	255	399	224
DLBC	27	0	17	0	0	0	0	0	0	0	0
GBM	598	565	563	0	287	542	0	491	0	214	276
HNSC	312	311	288	86	292	0	263	0	309	212	0
KICH	65	0	0	0	0	0	0	0	0	0	0
KIRC	502	502	490	0	500	72	469	0	463	454	403
KIRP	135	95	103	0	117	16	63	0	43	0	0
LAML	202	200	0	0	192	0	179	0	187	0	199
LGG	181	161	144	0	140	27	47	0	67	0	0
LIHC	99	62	82	0	0	0	17	0	54	0	0
LUAD	439	292	303	0	347	32	250	0	100	237	229
LUSC	360	279	289	0	282	154	223	0	202	195	178
OV	592	580	566	0	557	574	297	570	454	412	316
PAAD	48	0	48	0	30	0	0	0	0	0	0
PRAD	174	127	152	0	153	0	53	0	81	0	83
SARC	29	0	20	0	0	0	0	0	0	0	0
SKCM	273	138	252	101	240	0	212	0	240	0	0
STAD	226	159	161	0	133	0	57	0	151	0	133
THCA	353	193	268	81	230	0	158	0	187	0	0
UCEC	512	451	444	106	451	54	266	0	377	200	248
PANCANCER	6881	5671	5810	478	5471	2224	3527	1061	4109	2731	2860