Broad GDAC stddata__2012_12_06 Run Status : LUAD

Tumor	BCR	Clinical	CN	LowP	Methylation	mRNA	mRNAseq	miR	miRseq	RPPA	MAF
LUAD	473	333	356	0	430	32	353	0	365	237	229

Note that the links below require Broad internal Firehose login credentials.

	Pipeline Dataset	Not Available	Successful
1	Clinical_Pick_Tier1	0	1
2	CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB	1	0
3	CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT	1	0
4	CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB	1	0
5	CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT	1	0
6	CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB	1	0
7	CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT	1	0
8	Merge_Clinical	0	1
9	Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data	1	0
10	Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg	1	0
11	Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data	1	0
12	Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg	1	0
13	Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data	1	0
14	Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg	1	0
15	Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data	1	0
16	Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg	1	0
17	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg	1	0
18	Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data	1	0
19	Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data	1	0
20	Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data	1	0
21	Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data	1	0
22	Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data	0	1
23	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data	0	1
24	Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data	1	0
25	Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data	1	0
26	Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data	1	0
27	Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data	1	0
28	Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data	1	0
29	Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data	0	1
30	Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data	0	1
31	Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data	0	1
32	Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data	0	1
33	Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data	0	1
34	Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data	1	0
35	Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data	1	0
36	Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data	1	0
37	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data	1	0
38	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data	1	0
39	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data	1	0
40	Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data	1	0
41	Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data	1	0
42	Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data	1	0
43	Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data	0	1
44	Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data	0	1
45	Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data	0	1
46	Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data	0	1
47	Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data	0	1
48	Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data	0	1
49	Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data	0	1
50	Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data	0	1
51	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data	1	0
52	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed	0	1
53	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data	1	0
54	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data	1	0
55	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data	1	0
56	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data	1	0
57	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg	0	1
58	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg	0	1
59	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg	0	1
60	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg	0	1
61	Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data	1	0
62	Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data	1	0
63	Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data	1	0
64	Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data	1	0
65	Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data	1	0
66	Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data	1	0
67	Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data	1	0
68	Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg	1	0
69	Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg	1	0
70	Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg	1	0
71	Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data	1	0
72	Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data	1	0
73	Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data	1	0
74	Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data	1	0
75	Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data	1	0
76	Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data	1	0
77	Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data	1	0
78	Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg	1	0
79	Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg	1	0
80	Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg	1	0
81	Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	1	0
82	Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	1	0
83	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	1	0
84	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	1	0
85	Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	0	1
86	Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	0	1
87	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data	1	0
88	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data	1	0
89	Mutation_Packager_Calls	0	1
90	Mutation_Packager_Coverage	0	1
91	RPPA_AnnotateWithGene	0	1
92	NORMALS-Clinical_Pick_Tier1	1	0
93	NORMALS-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB	1	0
94	NORMALS-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT	1	0
95	NORMALS-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB	1	0
96	NORMALS-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT	1	0
97	NORMALS-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB	1	0
98	NORMALS-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT	1	0
99	NORMALS-Merge_Clinical	1	0
100	NORMALS-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data	1	0
101	NORMALS-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg	1	0
102	NORMALS-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data	1	0
103	NORMALS-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg	1	0
104	NORMALS-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data	1	0
105	NORMALS-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg	1	0
106	NORMALS-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data	1	0
107	NORMALS-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg	1	0
108	NORMALS-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg	1	0
109	NORMALS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data	1	0
110	NORMALS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data	1	0
111	NORMALS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data	1	0
112	NORMALS-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data	1	0
113	NORMALS-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data	0	1
114	NORMALS-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data	0	1
115	NORMALS-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data	1	0
116	NORMALS-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data	1	0
117	NORMALS-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data	1	0
118	NORMALS-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data	1	0
119	NORMALS-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data	1	0
120	NORMALS-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data	1	0
121	NORMALS-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data	1	0
122	NORMALS-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data	0	1
123	NORMALS-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data	0	1
124	NORMALS-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data	1	0
125	NORMALS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data	1	0
126	NORMALS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data	1	0
127	NORMALS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data	1	0
128	NORMALS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data	1	0
129	NORMALS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data	1	0
130	NORMALS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data	1	0
131	NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data	1	0
132	NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data	1	0
133	NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data	1	0
134	NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data	0	1
135	NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data	0	1
136	NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data	0	1
137	NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data	0	1
138	NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data	0	1
139	NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data	0	1
140	NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data	0	1
141	NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data	0	1
142	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data	1	0
143	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed	0	1
144	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data	1	0
145	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data	1	0
146	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data	1	0
147	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data	1	0
148	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg	0	1
149	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg	0	1
150	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg	0	1
151	NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg	0	1
152	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data	1	0
153	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data	1	0
154	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data	1	0
155	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data	1	0
156	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data	1	0
157	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data	1	0
158	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data	1	0
159	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg	1	0
160	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg	1	0
161	NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg	1	0
162	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data	1	0
163	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data	1	0
164	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data	1	0
165	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data	1	0
166	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data	1	0
167	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data	1	0
168	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data	1	0
169	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg	1	0
170	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg	1	0
171	NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg	1	0
172	NORMALS-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	1	0
173	NORMALS-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	1	0
174	NORMALS-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	1	0
175	NORMALS-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	1	0
176	NORMALS-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	1	0
177	NORMALS-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	1	0
178	NORMALS-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data	1	0
179	NORMALS-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data	1	0
180	NORMALS-Mutation_Packager_Calls	1	0
181	NORMALS-Mutation_Packager_Coverage	1	0
182	NORMALS-RPPA_AnnotateWithGene	1	0
183	ALL-Clinical_Pick_Tier1	0	1
184	ALL-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB	1	0
185	ALL-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT	1	0
186	ALL-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB	1	0
187	ALL-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT	1	0
188	ALL-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB	1	0
189	ALL-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT	1	0
190	ALL-Merge_Clinical	0	1
191	ALL-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data	1	0
192	ALL-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg	1	0
193	ALL-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data	1	0
194	ALL-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg	1	0
195	ALL-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data	1	0
196	ALL-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg	1	0
197	ALL-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data	1	0
198	ALL-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg	1	0
199	ALL-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg	1	0
200	ALL-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data	1	0
201	ALL-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data	1	0
202	ALL-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data	1	0
203	ALL-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data	1	0
204	ALL-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data	0	1
205	ALL-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data	0	1
206	ALL-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data	1	0
207	ALL-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data	1	0
208	ALL-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data	1	0
209	ALL-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data	1	0
210	ALL-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data	1	0
211	ALL-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data	0	1
212	ALL-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data	0	1
213	ALL-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data	0	1
214	ALL-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data	0	1
215	ALL-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data	0	1
216	ALL-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data	1	0
217	ALL-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data	1	0
218	ALL-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data	1	0
219	ALL-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data	1	0
220	ALL-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data	1	0
221	ALL-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data	1	0
222	ALL-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data	1	0
223	ALL-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data	1	0
224	ALL-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data	1	0
225	ALL-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data	0	1
226	ALL-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data	0	1
227	ALL-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data	0	1
228	ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data	0	1
229	ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data	0	1
230	ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data	0	1
231	ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data	0	1
232	ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data	0	1
233	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data	1	0
234	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed	0	1
235	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data	1	0
236	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data	1	0
237	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data	1	0
238	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data	1	0
239	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg	0	1
240	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg	0	1
241	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg	0	1
242	ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg	0	1
243	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data	1	0
244	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data	1	0
245	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data	1	0
246	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data	1	0
247	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data	1	0
248	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data	1	0
249	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data	1	0
250	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg	1	0
251	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg	1	0
252	ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg	1	0
253	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data	1	0
254	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data	1	0
255	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data	1	0
256	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data	1	0
257	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data	1	0
258	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data	1	0
259	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data	1	0
260	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg	1	0
261	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg	1	0
262	ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg	1	0
263	ALL-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	1	0
264	ALL-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	1	0
265	ALL-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	1	0
266	ALL-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	1	0
267	ALL-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data	0	1
268	ALL-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data	0	1
269	ALL-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data	1	0
270	ALL-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data	1	0
271	ALL-Mutation_Packager_Calls	0	1
272	ALL-Mutation_Packager_Coverage	0	1
273	ALL-RPPA_AnnotateWithGene	0	1
	Total	202	71

This table generated on Thu Dec 20 15:26:55 2012

Broad GDAC Standard Data Status stddata__2012_12_06 Run for Tumor Type: LUAD

Broad GDAC Standard Data Status
stddata__2012_12_06 Run for Tumor Type: LUAD