| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/PANCAN8/2125170/0.GDAC_clinicalDataMerger.Finished/PANCAN8.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_pancan8.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | PANCAN8 |
| Execution Times: | |
| Submitted: | 22:17:43 10-12-12 |
| Completed: | |
| Elapsed: | 02 hrs 04 mins 28 secs |
step 1. GDAC_clinicalDataPicker [id: 251990] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/PANCAN8/2125170/0.GDAC_clinicalDataMerger.Finished/PANCAN8.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_pancan8.tsv |
| nodeColumn | 1 |
| outPrefix | PANCAN8 |
| Output Files: | |
| PANCAN8.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 22:17:57 10-12-12 |
| Completed: | 23:25:05 10-12-12 |
| Elapsed: | 01 hrs 07 mins 08 secs |
step 2. GDAC_clinicalDataPickerReport [id: 251991] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | PANCAN8.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 22:17:57 10-12-12 |
| Completed: | 00:22:09 11-12-12 |
| Elapsed: | 02 hrs 04 mins 12 secs |