Broad GDAC Standard Data Status
stddata__2012_12_21 Run for Tumor Type: HNSC

TumorBCRClinicalCNLowPMethylationmRNAmRNAseqmiRmiRseqRPPAMAF
HNSC3433153069631003030309212306

Note that the links below require Broad internal Firehose login credentials.

Pipeline DatasetNot AvailableAvailableInProcessSuccessfulUnsuccessful
1Clinical_Pick_Tier100010
2CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
3CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
4CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
5CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
6CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
7CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
8Merge_Clinical00010
9Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
10Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
11Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
12Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
13Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
14Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
15Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
16Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
17Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg00010
18Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
19Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
20Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
21Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
22Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data10000
23Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
24Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
25Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
26Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
27Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
28Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
29Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
30Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
31Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
32Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
33Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data00010
34Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data00010
35Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data00010
36Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data00010
37Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data00010
38Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
39Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
40Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
41Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
42Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
43Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
44Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
45Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
46Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
47Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
48Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data00010
49Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data00010
50Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data00010
51Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
52Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
53Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
54Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
55Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
56Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
57Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
58Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
59Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
60Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
61Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
62Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
63Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
64Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
65Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
66Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
67Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
68Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
69Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
70Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
71Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
72Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
73Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
74Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
75Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
76Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
77Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
78Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
79Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
80Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
81Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
82Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
83Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
84Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
85Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
86Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
87Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
88Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
89Mutation_Packager_Calls00010
90Mutation_Packager_Coverage00010
91RPPA_AnnotateWithGene00010
92NORMALS-Clinical_Pick_Tier110000
93NORMALS-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
94NORMALS-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
95NORMALS-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
96NORMALS-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
97NORMALS-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
98NORMALS-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
99NORMALS-Merge_Clinical10000
100NORMALS-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
101NORMALS-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
102NORMALS-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
103NORMALS-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
104NORMALS-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
105NORMALS-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
106NORMALS-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
107NORMALS-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
108NORMALS-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg00010
109NORMALS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
110NORMALS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
111NORMALS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
112NORMALS-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
113NORMALS-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data10000
114NORMALS-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
115NORMALS-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
116NORMALS-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data10000
117NORMALS-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data10000
118NORMALS-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
119NORMALS-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
120NORMALS-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
121NORMALS-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
122NORMALS-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
123NORMALS-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
124NORMALS-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data10000
125NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data00010
126NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data00010
127NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data00010
128NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data00010
129NORMALS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
130NORMALS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
131NORMALS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
132NORMALS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
133NORMALS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
134NORMALS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
135NORMALS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
136NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
137NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
138NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
139NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data00010
140NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data00010
141NORMALS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data00010
142NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
143NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
144NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
145NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
146NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
147NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
148NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
149NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
150NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
151NORMALS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
152NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
153NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
154NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
155NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
156NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
157NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
158NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
159NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
160NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
161NORMALS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
162NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
163NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
164NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
165NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
166NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
167NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
168NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
169NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
170NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
171NORMALS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
172NORMALS-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
173NORMALS-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
174NORMALS-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
175NORMALS-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
176NORMALS-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
177NORMALS-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
178NORMALS-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
179NORMALS-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
180NORMALS-Mutation_Packager_Calls10000
181NORMALS-Mutation_Packager_Coverage10000
182NORMALS-RPPA_AnnotateWithGene10000
183ALL-Clinical_Pick_Tier100010
184ALL-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
185ALL-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
186ALL-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
187ALL-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
188ALL-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
189ALL-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
190ALL-Merge_Clinical00010
191ALL-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
192ALL-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
193ALL-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
194ALL-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
195ALL-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
196ALL-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
197ALL-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
198ALL-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
199ALL-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg00010
200ALL-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
201ALL-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
202ALL-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
203ALL-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
204ALL-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data10000
205ALL-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
206ALL-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
207ALL-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
208ALL-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
209ALL-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
210ALL-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
211ALL-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
212ALL-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
213ALL-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
214ALL-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
215ALL-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data00010
216ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data00010
217ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data00010
218ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data00010
219ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data00010
220ALL-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
221ALL-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
222ALL-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
223ALL-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
224ALL-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
225ALL-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
226ALL-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
227ALL-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
228ALL-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
229ALL-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
230ALL-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data00010
231ALL-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data00010
232ALL-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data00010
233ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
234ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
235ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
236ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
237ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
238ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
239ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
240ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
241ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
242ALL-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
243ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
244ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
245ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
246ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
247ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
248ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
249ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
250ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
251ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
252ALL-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
253ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
254ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
255ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
256ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
257ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
258ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
259ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
260ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
261ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
262ALL-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
263ALL-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
264ALL-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
265ALL-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
266ALL-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
267ALL-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
268ALL-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
269ALL-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
270ALL-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
271ALL-Mutation_Packager_Calls00010
272ALL-Mutation_Packager_Coverage00010
273ALL-RPPA_AnnotateWithGene00010
Total20600670

This table generated on Wed Jan 2 18:18:05 2013