| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/KIRC/2895936/0.GDAC_clinicalDataMerger.Finished/KIRC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_kirc.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | KIRC |
| Execution Times: | |
| Submitted: | 11:58:32 08-04-13 |
| Completed: | |
| Elapsed: | 06 hrs 50 mins 28 secs |
step 1. GDAC_clinicalDataPicker [id: 372282] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/KIRC/2895936/0.GDAC_clinicalDataMerger.Finished/KIRC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_30/stage3_params_clin_kirc.tsv |
| nodeColumn | 1 |
| outPrefix | KIRC |
| Output Files: | |
| KIRC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 12:02:23 08-04-13 |
| Completed: | 12:52:07 08-04-13 |
| Elapsed: | 00 hrs 49 mins 43 secs |
step 2. GDAC_clinicalDataPickerReport [id: 372283] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | KIRC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 12:02:23 08-04-13 |
| Completed: | 18:48:59 08-04-13 |
| Elapsed: | 06 hrs 46 mins 35 secs |