Liver Hepatocellular Carcinoma (LIHC) Samples Summary Report
Overview
Introduction

The Broad GDAC mirrors data from the DCC on a daily basis. Although all data is mirrored, not every sample is ingested into Firehose. There are three main mechanisms that filter samples to ensure that only the most scientifically relevant samples make it into our standard data and analyses runs. These three mechanisms are redactions, replicate filtering, and blacklisting. This report summarizes the data that is ingested into Firehose, describes the three filtering mechanisms, and lists those samples that are removed.

Summary

There were 0 redacted samples, 0 replicate aliquots, and 0 blacklisted aliquots. The table below represents the sample counts for those samples that were ingested into firehose after filtering out redactions, replicates, and blacklisted data.

Table 1.  Get Full Table Summary of TCGA Tumor Data.

Tumor BCR Clinical CN LowP Methylation mRNA mRNASeq miR miRSeq RPPA MAF
LIHC 126 73 99 0 98 0 69 0 96 0 0
Results
Ingested Samples

This section includes a more granular look at the samples ingested into Firehose. A sample counts table is provided that is broken down by sample type (e.g. Primary Solid Tumor, Recurrent Solid Tumor, Normal Blood, etc.). Furthermore, each count is a link to an additional table containing a breakdown of the samples and their specific details (e.g. platform, sequencing center, etc.).

The following platforms are outdated and are not included in the counts depicted in the table below.

  • Agilent SurePrint G3 Human CGH Microarray Kit 1x1M

  • Agilent Human Genome CGH Microarray 244A

  • Agilent Human Genome CGH Custom Microarray 2x415K

  • Affymetrix Human Exon 1.0 ST Array

  • Illumina DNA Methylation OMA002 Cancer Panel I

  • Illumina DNA Methylation OMA003 Cancer Panel I

  • Illumina Human1M-Duo BeadChip

  • Illumina 550K Infinium HumanHap550 SNP Chip

The sample type short letter codes in the table below are defined in the following list.

  • TP: Primary Solid Tumor

  • TR: Recurrent Solid Tumor

  • TB: Primary Blood Derived Cancer - Peripheral Blood

  • TM: Metastatic

  • TAM: Additional Metastatic

  • NB: Blood Derived Normal

  • NT: Solid Tissue Normal

Table 2.  Click on any sample count to display a table detailing all the samples that comprise that count. Please note, there are usually multiple protocols per data type, so there are typically many more rows than the count implies.

Sample Type BCR Clinical CN LowP Methylation mRNA mRNASeq miR miRSeq RPPA MAF
TP 126 73 99 0 98 0 69 0 96 0 0
NB 56 50 56 0 0 0 0 0 0 0 0
NT 63 41 59 0 50 0 36 0 50 0 0
Totals 126 73 99 0 98 0 69 0 96 0 0
LIHC Primary Solid Tumor BCR Data

Table S1. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-4073 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10Q Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10R Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A110 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A112 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A216 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A217 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A3KF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A3KG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BD-A2L6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BD-A3EP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BD-A3ER Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BW-A5NO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BW-A5NP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BW-A5NQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5258 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5259 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5260 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5261 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5262 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5263 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5264 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A123 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A1HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3M9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3MA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3MB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3MC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A113 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A114 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A115 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A116 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A118 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A119 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11A Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11C Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11D Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1E9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1ED Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39V Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A0 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A2 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A7 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A8 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4ND Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A4NJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-ED-A459 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-ED-A4XI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-ED-A5KG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A12J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A26S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A2KA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A2KB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A2KC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A3JL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A3RK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-ES-A2HS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-ES-A2HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A23B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A2QQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A2QR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3I0 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3I1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3R2 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3R3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A495 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A496 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A4ZP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A4ZQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25V Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A5SI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A5SJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A5SK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A5SL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HP-A5MZ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-MR-A520 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-PD-A5DF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
LIHC Primary Solid Tumor Clinical Data

Table S2. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-4073 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10Q Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10R Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A110 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A112 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A216 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A217 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A3KF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A3KG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5258 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5260 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5261 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5262 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5263 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5264 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A123 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A1HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A3MA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A3MB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A3MC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A113 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A114 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A115 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A116 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A118 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A119 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11A Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11C Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11D Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1E9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1ED Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A12J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A26S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A2KA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A2KB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A2KC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A3JL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A3RK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-ES-A2HS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-ES-A2HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FV-A2QR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FV-A3I1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FV-A3R3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25V Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
LIHC Primary Solid Tumor CN Data

Table S3. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072-01B-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-4072-01B-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-4072-01B-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-4072-01B-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-4072-01B-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-4073-01B-02D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-4073-01B-02D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-4073-01B-02D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-4073-01B-02D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-4073-01B-02D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10Q-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10Q-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10Q-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10Q-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10Q-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10R-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10R-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10R-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10R-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10R-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10S-01A-22D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10S-01A-22D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10S-01A-22D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10S-01A-22D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10S-01A-22D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10T-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10T-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10T-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10T-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10T-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10U-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10U-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10U-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10U-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10U-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10W-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10W-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10W-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10W-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10W-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10X-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10X-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10X-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10X-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10X-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10Y-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10Y-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10Y-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10Y-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10Y-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10Z-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10Z-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10Z-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10Z-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10Z-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A110-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A110-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A110-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A110-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A110-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A112-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A112-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A112-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A112-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A112-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A216-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A216-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A216-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A216-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A216-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A217-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A217-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A217-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A217-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A217-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A3KF-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A3KF-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A3KF-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A3KF-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A3KF-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A3KG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A3KG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A3KG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A3KG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A3KG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BD-A2L6-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BD-A2L6-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BD-A2L6-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BD-A2L6-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BD-A2L6-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BD-A3EP-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BD-A3EP-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BD-A3EP-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BD-A3EP-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BD-A3EP-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BD-A3ER-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BD-A3ER-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BD-A3ER-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BD-A3ER-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BD-A3ER-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5258-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5258-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5258-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5258-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5258-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5259-01A-31D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5260-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5260-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5260-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5260-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5260-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5261-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5261-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5261-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5261-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5261-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5262-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5262-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5262-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5262-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5262-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5263-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5263-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5263-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5263-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5263-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5264-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5264-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5264-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5264-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5264-01A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A123-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A1HT-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A1HT-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A1HT-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A1HT-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A1HT-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3M9-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3M9-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3M9-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3M9-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3M9-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3MA-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3MA-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3MA-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3MA-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3MA-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3MB-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3MB-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3MB-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3MB-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3MB-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3MC-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3MC-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3MC-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3MC-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3MC-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A113-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A113-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A113-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A113-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A113-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A114-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A114-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A114-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A114-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A114-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A115-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A115-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A115-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A115-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A115-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A116-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A116-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A116-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A116-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A116-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A118-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A118-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A118-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A118-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A118-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A119-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A119-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A119-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A119-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A119-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11A-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11A-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11A-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11A-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11A-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11B-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11B-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11B-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11B-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11B-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11C-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11C-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11C-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11C-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11C-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11D-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11D-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11D-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11D-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11D-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1E9-01A-21D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1E9-01A-21D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1E9-01A-21D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1E9-01A-21D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1E9-01A-21D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EA-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EA-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EA-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EA-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EA-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EB-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EB-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EB-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EB-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EB-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EC-01A-21D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EC-01A-21D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EC-01A-21D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EC-01A-21D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EC-01A-21D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1ED-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1ED-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1ED-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1ED-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1ED-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EE-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EE-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EE-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EE-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EE-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EF-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EF-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EF-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EF-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EF-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EH-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EH-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EH-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EH-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EH-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EI-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EI-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EI-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EI-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EI-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EJ-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EJ-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EJ-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EJ-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EJ-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EL-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EL-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EL-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EL-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EL-01A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39V-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39V-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39V-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39V-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39V-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39W-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39W-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39W-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39W-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39W-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39X-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39X-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39X-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39X-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39X-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39Y-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39Y-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39Y-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39Y-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39Y-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39Z-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39Z-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39Z-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39Z-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39Z-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A0-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A0-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A0-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A0-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A0-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A1-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A1-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A1-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A1-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A1-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A2-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A2-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A2-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A2-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A2-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A4-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A4-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A4-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A4-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A4-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A5-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A5-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A5-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A5-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A5-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A6-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A6-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A6-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A6-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A6-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A7-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A7-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A7-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A7-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A7-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A8-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A8-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A8-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A8-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A8-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A12J-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A12J-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A12J-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A12J-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A12J-01A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A26S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A26S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A26S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A26S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A26S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A2KA-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A2KA-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A2KA-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A2KA-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A2KA-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A2KB-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A2KB-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A2KB-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A2KB-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A2KB-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A2KC-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A2KC-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A2KC-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A2KC-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A2KC-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A3JL-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A3JL-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A3JL-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A3JL-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A3JL-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A3RK-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A3RK-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A3RK-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A3RK-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A3RK-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-ES-A2HS-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-ES-A2HS-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-ES-A2HS-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-ES-A2HS-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-ES-A2HS-01A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-ES-A2HT-01A-12D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-ES-A2HT-01A-12D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-ES-A2HT-01A-12D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-ES-A2HT-01A-12D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-ES-A2HT-01A-12D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A23B-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A23B-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A23B-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A23B-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A23B-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A2QQ-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A2QQ-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A2QQ-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A2QQ-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A2QQ-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A2QR-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A2QR-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A2QR-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A2QR-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A2QR-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3I0-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3I0-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3I0-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3I0-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3I0-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3I1-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3I1-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3I1-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3I1-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3I1-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3R2-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3R2-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3R2-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3R2-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3R2-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3R3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3R3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3R3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3R3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3R3-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25S-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25T-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25T-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25T-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25T-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25T-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25U-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25U-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25U-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25U-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25U-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25V-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25V-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25V-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25V-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25V-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25W-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25W-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25W-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25W-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25W-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25X-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25X-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25X-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25X-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25X-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25Y-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25Y-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25Y-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25Y-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25Y-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25Z-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25Z-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25Z-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25Z-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25Z-01A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CG-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CH-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CH-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CH-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CH-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CH-01A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CI-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CI-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CI-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CI-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CI-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CJ-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CJ-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CJ-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CJ-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CJ-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CK-01A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
LIHC Primary Solid Tumor Methylation Data

Table S4. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072-01B-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-4073-01B-02D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10Q-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10R-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10S-01A-22D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10T-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10U-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10W-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10X-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10Y-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10Z-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A110-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A112-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A216-01A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A217-01A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A3KF-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A3KG-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BD-A2L6-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BD-A3EP-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BD-A3ER-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-5258-01A-01D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-5259-01A-31D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-5260-01A-01D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-5261-01A-01D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-5262-01A-01D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-5263-01A-01D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-5264-01A-01D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-A123-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-A1HT-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-A3M9-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-A3MA-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-A3MB-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-CC-A3MC-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A113-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A114-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A115-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A116-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A118-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A119-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11A-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11B-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11C-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11D-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1E9-01A-21D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EA-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EB-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EC-01A-21D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1ED-01A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EE-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EF-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EG-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EH-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EI-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EJ-01A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EK-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EL-01A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39V-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39W-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39X-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39Y-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39Z-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A0-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A1-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A2-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A3-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A4-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A5-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A6-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A7-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A8-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A12J-01A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A26S-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A2KA-01A-11D-A17Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A2KB-01A-11D-A17Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A2KC-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A3JL-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A3RK-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-ES-A2HT-01A-12D-A17Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A23B-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A2QQ-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A2QR-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A3I0-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A3I1-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A3R2-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A3R3-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25S-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25T-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25U-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25V-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25W-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25X-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25Y-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25Z-01A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A3CG-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A3CH-01A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A3CI-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A3CJ-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A3CK-01A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
LIHC Primary Solid Tumor mRNASeq Data

Table S5. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072-01B-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-4072-01B-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-4072-01B-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-4072-01B-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-4072-01B-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-4073-01B-02R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10Q-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10R-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10S-01A-22R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10T-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10T-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10T-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10T-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10T-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10U-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10U-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10U-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10U-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10U-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10W-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10W-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10W-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10W-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10W-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10X-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10X-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10X-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10X-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10X-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10Y-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10Y-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10Y-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10Y-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10Y-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10Z-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A112-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A216-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A216-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A216-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A216-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A216-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A217-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A217-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A217-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A217-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A217-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A3KF-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A3KF-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A3KF-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A3KF-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A3KF-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A3KG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A3KG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A3KG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A3KG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A3KG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BD-A2L6-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BD-A2L6-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BD-A2L6-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BD-A2L6-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BD-A2L6-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-CC-5258-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-CC-5258-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-CC-5258-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-CC-5258-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-CC-5258-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-CC-5260-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-CC-5260-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-CC-5260-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-CC-5260-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-CC-5260-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-CC-5262-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-CC-5262-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-CC-5262-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-CC-5262-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-CC-5262-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-CC-5263-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-CC-5264-01A-01R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-CC-A1HT-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-CC-A3MB-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-CC-A3MB-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-CC-A3MB-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-CC-A3MB-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-CC-A3MB-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A113-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A113-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A113-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A113-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A113-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A114-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A114-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A114-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A114-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A114-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A115-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A115-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A115-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A115-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A115-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A116-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A118-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A119-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A11B-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A11C-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A11C-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A11C-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A11C-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A11C-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A11D-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A11D-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A11D-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A11D-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A11D-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EA-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EA-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EA-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EA-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EA-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EB-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EC-01A-21R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1ED-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1ED-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1ED-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1ED-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1ED-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EE-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EF-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EF-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EF-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EF-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EF-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EG-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EH-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EI-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EI-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EI-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EI-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EI-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EJ-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EJ-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EJ-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EJ-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EJ-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EL-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EL-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EL-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EL-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EL-01A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A39X-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A39X-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A39X-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A39X-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A39X-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A39Y-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A39Y-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A39Y-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A39Y-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A39Y-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A3A2-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A3A2-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A3A2-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A3A2-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A3A2-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-EP-A12J-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-EP-A12J-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-EP-A12J-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-EP-A12J-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-EP-A12J-01A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-EP-A26S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-EP-A26S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-EP-A26S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-EP-A26S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-EP-A26S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-EP-A2KA-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-EP-A2KA-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-EP-A2KA-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-EP-A2KA-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-EP-A2KA-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-EP-A2KB-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-EP-A2KB-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-EP-A2KB-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-EP-A2KB-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-EP-A2KB-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-EP-A2KC-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-EP-A2KC-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-EP-A2KC-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-EP-A2KC-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-EP-A2KC-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-ES-A2HS-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-ES-A2HS-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-ES-A2HS-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-ES-A2HS-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-ES-A2HS-01A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-ES-A2HT-01A-12R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-ES-A2HT-01A-12R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-ES-A2HT-01A-12R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-ES-A2HT-01A-12R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-ES-A2HT-01A-12R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A23B-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A23B-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A23B-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A23B-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A23B-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A2QQ-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A2QQ-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A2QQ-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A2QQ-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A2QQ-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A3I1-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A3I1-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A3I1-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A3I1-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A3I1-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A3R2-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A3R2-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A3R2-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A3R2-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A3R2-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A3R3-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A3R3-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A3R3-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A3R3-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A3R3-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A25S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A25S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A25S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A25S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A25S-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A25T-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A25T-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A25T-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A25T-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A25T-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A25U-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A25U-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A25U-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A25U-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A25U-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A25V-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A25V-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A25V-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A25V-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A25V-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A25X-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A25X-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A25X-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A25X-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A25X-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A25Y-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A25Y-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A25Y-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A25Y-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A25Y-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A25Z-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A25Z-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A25Z-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A25Z-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A25Z-01A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A3CH-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A3CH-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A3CH-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A3CH-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A3CH-01A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A3CJ-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A3CJ-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A3CJ-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A3CJ-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A3CJ-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A3CK-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A3CK-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A3CK-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A3CK-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A3CK-01A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
LIHC Primary Solid Tumor miRSeq Data

Table S6. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072-01B-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-4072-01B-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-4073-01B-02R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-4073-01B-02R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10Q-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10Q-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10R-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10R-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10S-01A-22R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10S-01A-22R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10T-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10T-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10U-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10U-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10W-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10W-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10X-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10X-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10Y-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10Y-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10Z-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10Z-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A110-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A110-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A112-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A112-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A216-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A216-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A217-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A217-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A3KF-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A3KF-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A3KG-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A3KG-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BD-A2L6-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BD-A2L6-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BD-A3EP-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BD-A3EP-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BD-A3ER-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BD-A3ER-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-5258-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-5258-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-5259-01A-31R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-5259-01A-31R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-5260-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-5260-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-5261-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-5261-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-5262-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-5262-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-5263-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-5263-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-5264-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-5264-01A-01R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-A123-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-A123-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-A1HT-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-A1HT-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-A3M9-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-A3M9-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-A3MA-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-A3MA-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-A3MB-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-A3MB-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-CC-A3MC-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-CC-A3MC-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A113-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A113-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A114-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A114-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A115-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A115-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A116-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A116-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A118-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A118-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A119-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A119-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11A-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11A-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11B-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11B-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11C-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11C-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11D-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11D-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EA-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EA-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EB-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EB-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EC-01A-21R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EC-01A-21R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1ED-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1ED-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EE-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EE-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EF-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EF-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EG-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EG-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EH-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EH-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EI-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EI-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EJ-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EJ-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EK-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EK-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EL-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EL-01A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39V-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39V-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39W-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39W-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39X-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39X-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39Y-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39Y-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39Z-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39Z-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A0-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A0-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A1-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A1-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A2-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A2-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A3-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A3-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A4-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A4-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A5-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A5-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A6-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A6-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A7-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A7-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A8-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A8-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A12J-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A12J-01A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A26S-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A26S-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A2KA-01A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A2KA-01A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A2KB-01A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A2KB-01A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A2KC-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A2KC-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A3JL-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A3JL-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A3RK-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A3RK-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-ES-A2HS-01A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-ES-A2HS-01A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-ES-A2HT-01A-12R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-ES-A2HT-01A-12R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A23B-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A23B-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A2QQ-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A2QQ-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A2QR-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A2QR-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A3I0-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A3I0-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A3I1-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A3I1-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25S-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25S-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25T-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25T-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25U-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25U-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25V-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25V-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25W-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25W-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25X-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25X-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25Y-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25Y-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A25Z-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A25Z-01A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A3CG-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A3CG-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A3CH-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A3CH-01A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A3CI-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A3CI-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A3CJ-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A3CJ-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A3CK-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A3CK-01A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
LIHC Blood Derived Normal BCR Data

Table S7. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-4073 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A217 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A3KF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A3KG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5258 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5259 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5260 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5261 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5262 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5263 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-5264 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A123 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A1HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3M9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3MA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3MB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-CC-A3MC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A113 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A114 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A115 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A116 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A119 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11A Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1ED Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A12J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A26S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A2KA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A2KB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A2KC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A3JL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A3RK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A2QQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3I1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3R3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25V Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
LIHC Blood Derived Normal Clinical Data

Table S8. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-4073 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A217 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A3KF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A3KG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5258 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5260 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5261 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5262 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5263 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-5264 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A123 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A1HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A3MA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A3MB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-CC-A3MC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A113 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A114 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A115 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A116 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A119 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11A Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1ED Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A12J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A26S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A2KA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A2KB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A2KC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A3JL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A3RK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FV-A3I1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FV-A3R3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25V Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
LIHC Blood Derived Normal CN Data

Table S9. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-4072-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-4072-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-4072-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-4072-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-4072-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-4073-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-4073-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-4073-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-4073-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-4073-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A217-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A217-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A217-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A217-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A217-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A3KF-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A3KF-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A3KF-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A3KF-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A3KF-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A3KG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A3KG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A3KG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A3KG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A3KG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5258-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5258-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5258-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5258-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5258-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5259-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5259-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5259-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5259-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5259-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5260-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5260-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5260-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5260-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5260-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5261-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5261-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5261-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5261-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5261-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5262-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5262-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5262-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5262-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5262-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5263-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5263-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5263-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5263-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5263-10B-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-5264-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-5264-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-5264-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-5264-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-5264-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A123-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A123-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A123-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A123-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A123-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A1HT-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A1HT-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A1HT-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A1HT-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A1HT-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3M9-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3M9-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3M9-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3M9-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3M9-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3MA-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3MA-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3MA-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3MA-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3MA-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3MB-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3MB-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3MB-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3MB-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3MB-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-CC-A3MC-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-CC-A3MC-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-CC-A3MC-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-CC-A3MC-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-CC-A3MC-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A113-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A113-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A113-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A113-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A113-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A114-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A114-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A114-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A114-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A114-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A115-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A115-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A115-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A115-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A115-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A116-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A116-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A116-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A116-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A116-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A119-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A119-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A119-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A119-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A119-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11A-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11A-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11A-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11A-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11A-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11B-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11B-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11B-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11B-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11B-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EA-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EA-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EA-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EA-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EA-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EB-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EB-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EB-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EB-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EB-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1ED-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1ED-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1ED-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1ED-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1ED-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EE-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EE-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EE-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EE-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EE-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EF-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EF-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EF-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EF-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EF-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EH-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EH-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EH-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EH-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EH-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EI-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EI-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EI-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EI-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EI-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EJ-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EJ-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EJ-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EJ-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EJ-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EL-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EL-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EL-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EL-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EL-10A-01D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A12J-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A12J-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A12J-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A12J-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A12J-10A-01D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A26S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A26S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A26S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A26S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A26S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A2KA-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A2KA-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A2KA-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A2KA-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A2KA-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A2KB-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A2KB-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A2KB-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A2KB-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A2KB-10A-01D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A2KC-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A2KC-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A2KC-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A2KC-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A2KC-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A3JL-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A3JL-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A3JL-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A3JL-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A3JL-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A3RK-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A3RK-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A3RK-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A3RK-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A3RK-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A2QQ-10B-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A2QQ-10B-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A2QQ-10B-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A2QQ-10B-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A2QQ-10B-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3I1-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3I1-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3I1-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3I1-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3I1-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3R3-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3R3-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3R3-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3R3-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3R3-10A-01D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25S-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25T-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25T-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25T-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25T-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25T-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25U-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25U-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25U-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25U-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25U-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25V-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25V-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25V-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25V-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25V-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25Y-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25Y-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25Y-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25Y-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25Y-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25Z-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25Z-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25Z-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25Z-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25Z-10A-01D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CG-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CI-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CI-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CI-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CI-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CI-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CJ-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CJ-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CJ-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CJ-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CJ-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CK-10A-01D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
LIHC Solid Tissue Normal BCR Data

Table S10. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-A10Q Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10R Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A10Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A110 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A112 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BC-A216 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BD-A2L6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BD-A3EP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-BD-A3ER Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A113 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A114 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A115 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A116 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A118 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A119 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11A Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11C Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A11D Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1E9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1ED Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A1EL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39V Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A39Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A0 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A2 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A7 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-DD-A3A8 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A12J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A26S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-EP-A3RK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-ES-A2HS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-ES-A2HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A23B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A2QR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3I0 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3I1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FV-A3R2 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A25X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-G3-A3CH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
LIHC Solid Tissue Normal Clinical Data

Table S11. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-A10Q Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10R Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10U Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10Y Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A10Z Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A110 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A112 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-BC-A216 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A113 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A114 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A115 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A116 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A118 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A119 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11A Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11B Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11C Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A11D Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1E9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1ED Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-DD-A1EL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A12J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A26S Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-EP-A3RK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-ES-A2HS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-ES-A2HT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FV-A2QR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FV-A3I1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A25X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-G3-A3CH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
LIHC Solid Tissue Normal CN Data

Table S12. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-A10Q-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10Q-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10Q-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10Q-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10Q-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10R-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10R-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10R-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10R-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10R-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10S-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10S-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10S-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10S-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10S-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10T-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10T-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10T-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10T-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10T-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10U-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10U-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10U-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10U-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10U-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10W-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10W-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10W-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10W-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10W-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10X-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10X-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10X-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10X-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10X-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10Y-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10Y-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10Y-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10Y-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10Y-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A10Z-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A10Z-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A10Z-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A10Z-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A10Z-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A110-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A110-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A110-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A110-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A110-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A112-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A112-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A112-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A112-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A112-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BC-A216-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BC-A216-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BC-A216-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BC-A216-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BC-A216-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BD-A2L6-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BD-A2L6-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BD-A2L6-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BD-A2L6-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BD-A2L6-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BD-A3EP-11A-12D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BD-A3EP-11A-12D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BD-A3EP-11A-12D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BD-A3EP-11A-12D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BD-A3EP-11A-12D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-BD-A3ER-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-BD-A3ER-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-BD-A3ER-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-BD-A3ER-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-BD-A3ER-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A113-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A113-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A113-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A113-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A113-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A114-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A114-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A114-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A114-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A114-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A115-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A115-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A115-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A115-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A115-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A116-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A116-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A116-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A116-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A116-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A118-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A118-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A118-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A118-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A118-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A119-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A119-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A119-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A119-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A119-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11A-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11A-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11A-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11A-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11A-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11B-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11B-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11B-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11B-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11B-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11C-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11C-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11C-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11C-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11C-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A11D-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A11D-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A11D-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A11D-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A11D-11A-12D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1E9-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1E9-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1E9-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1E9-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1E9-11A-11D-A151-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EB-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EB-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EB-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EB-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EB-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EC-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EC-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EC-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EC-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EC-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EE-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EE-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EE-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EE-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EE-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EF-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EF-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EF-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EF-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EF-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EG-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EG-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EG-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EG-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EG-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EH-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EH-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EH-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EH-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EH-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A1EI-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A1EI-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A1EI-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A1EI-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A1EI-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39V-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39V-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39V-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39V-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39V-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39W-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39W-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39W-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39W-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39W-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39X-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39X-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39X-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39X-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39X-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39Y-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39Y-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39Y-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39Y-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39Y-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A39Z-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A39Z-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A39Z-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A39Z-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A39Z-11A-21D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A0-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A0-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A0-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A0-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A0-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A1-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A1-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A1-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A1-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A1-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A2-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A2-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A2-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A2-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A2-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A3-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A3-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A3-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A3-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A3-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A4-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A4-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A4-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A4-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A4-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A5-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A5-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A5-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A5-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A5-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A6-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A6-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A6-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A6-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A6-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A7-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A7-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A7-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A7-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A7-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-DD-A3A8-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-DD-A3A8-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-DD-A3A8-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-DD-A3A8-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-DD-A3A8-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A12J-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A12J-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A12J-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A12J-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A12J-11A-11D-A12Y-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A26S-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A26S-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A26S-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A26S-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A26S-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-EP-A3RK-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-EP-A3RK-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-EP-A3RK-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-EP-A3RK-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-EP-A3RK-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-ES-A2HS-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-ES-A2HS-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-ES-A2HS-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-ES-A2HS-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-ES-A2HS-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-ES-A2HT-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-ES-A2HT-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-ES-A2HT-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-ES-A2HT-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-ES-A2HT-11A-11D-A182-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A23B-11A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A23B-11A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A23B-11A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A23B-11A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A23B-11A-11D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A2QR-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A2QR-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A2QR-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A2QR-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A2QR-11A-11D-A20V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3I0-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3I0-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3I0-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3I0-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3I0-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3I1-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3I1-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3I1-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3I1-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3I1-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FV-A3R2-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-FV-A3R2-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FV-A3R2-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FV-A3R2-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FV-A3R2-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A25W-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A25W-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A25W-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A25W-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A25W-11A-12D-A16U-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-G3-A3CH-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 2 birdseed_genotype
TCGA-G3-A3CH-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-G3-A3CH-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-G3-A3CH-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-G3-A3CH-11A-11D-A22E-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
LIHC Solid Tissue Normal Methylation Data

Table S13. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-A10Q-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10R-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10S-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10T-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10U-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10W-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10X-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10Y-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A10Z-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A110-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A112-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BC-A216-11A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BD-A2L6-11A-21D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-BD-A3EP-11A-12D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A113-11A-12D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A114-11A-12D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A115-11A-12D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A116-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A118-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A119-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11A-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11B-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11C-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A11D-11A-12D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1E9-11A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EB-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EC-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1ED-11A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EE-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EF-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EG-11A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EH-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EI-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EJ-11A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A1EL-11A-11D-A153-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39V-11A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39W-11A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39X-11A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A39Z-11A-21D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A1-11A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A2-11A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-DD-A3A3-11A-11D-A22H-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A12J-11A-11D-A132-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-EP-A26S-11A-12D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-ES-A2HS-11A-11D-A17Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-ES-A2HT-11A-11D-A17Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A23B-11A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FV-A2QR-11A-11D-A20Z-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25W-11A-12D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-G3-A25X-11A-11D-A16X-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
LIHC Solid Tissue Normal mRNASeq Data

Table S14. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10Q-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10R-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10T-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10U-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10U-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10U-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10U-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10U-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10W-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10W-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10W-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10W-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10W-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10X-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10X-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10X-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10X-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10X-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10Y-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A10Z-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A10Z-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A10Z-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A10Z-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A10Z-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A110-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A110-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A110-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A110-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A110-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BC-A216-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BC-A216-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BC-A216-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BC-A216-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BC-A216-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-BD-A2L6-11A-21R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-BD-A2L6-11A-21R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-BD-A2L6-11A-21R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-BD-A2L6-11A-21R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-BD-A2L6-11A-21R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A113-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A113-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A113-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A113-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A113-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A114-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A118-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A118-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A118-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A118-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A118-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A119-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A11A-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A11A-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A11A-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A11A-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A11A-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A11B-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A11B-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A11B-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A11B-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A11B-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A11C-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A11C-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A11C-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A11C-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A11C-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A11D-11A-12R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EC-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EE-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EE-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EE-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EE-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EE-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EG-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EG-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EG-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EG-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EG-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 exon_expression
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 gene_expression
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing University of North Carolina 3 splice_junction_expression
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EH-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EI-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EI-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EI-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EI-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EI-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EJ-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EJ-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EJ-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EJ-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EJ-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A1EL-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A1EL-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A1EL-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A1EL-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A1EL-11A-11R-A155-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A39X-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A39X-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A39X-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A39X-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A39X-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-DD-A3A2-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-DD-A3A2-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-DD-A3A2-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-DD-A3A2-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-DD-A3A2-11A-11R-A213-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-EP-A12J-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-EP-A12J-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-EP-A12J-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-EP-A12J-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-EP-A12J-11A-11R-A131-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-EP-A26S-11A-12R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-EP-A26S-11A-12R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-EP-A26S-11A-12R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-EP-A26S-11A-12R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-EP-A26S-11A-12R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-ES-A2HT-11A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-ES-A2HT-11A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-ES-A2HT-11A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-ES-A2HT-11A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-ES-A2HT-11A-11R-A180-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A23B-11A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A23B-11A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A23B-11A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A23B-11A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A23B-11A-11R-A16W-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A3I0-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A3I0-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A3I0-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A3I0-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A3I0-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A3I1-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A3I1-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A3I1-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A3I1-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A3I1-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FV-A3R2-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FV-A3R2-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FV-A3R2-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FV-A3R2-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FV-A3R2-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-G3-A3CH-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-G3-A3CH-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-G3-A3CH-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-G3-A3CH-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-G3-A3CH-11A-11R-A22L-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
LIHC Solid Tissue Normal miRSeq Data

Table S15. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-BC-A10Q-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10Q-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10R-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10R-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10T-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10T-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10U-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10U-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10W-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10W-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10X-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10X-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10Y-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10Y-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A10Z-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A10Z-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A110-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A110-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BC-A216-11A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BC-A216-11A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BD-A2L6-11A-21R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BD-A2L6-11A-21R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-BD-A3EP-11A-12R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-BD-A3EP-11A-12R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A113-11A-12R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A113-11A-12R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A114-11A-12R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A114-11A-12R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A116-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A116-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A118-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A118-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A119-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A119-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11A-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11A-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11B-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11B-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11C-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11C-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A11D-11A-12R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A11D-11A-12R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EB-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EB-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EC-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EC-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EE-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EE-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EG-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EG-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EH-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EH-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EI-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EI-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EJ-11A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EJ-11A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A1EL-11A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A1EL-11A-11R-A154-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39V-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39V-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39W-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39W-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39X-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39X-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A39Z-11A-21R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A39Z-11A-21R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A1-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A1-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A2-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A2-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A3-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A3-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A4-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A4-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A5-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A5-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A6-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A6-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-DD-A3A8-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-DD-A3A8-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A12J-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A12J-11A-11R-A130-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A26S-11A-12R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A26S-11A-12R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-EP-A3RK-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-EP-A3RK-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-ES-A2HT-11A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-ES-A2HT-11A-11R-A17X-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A23B-11A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A23B-11A-11R-A16S-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A2QR-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A2QR-11A-11R-A214-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A3I0-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A3I0-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A3I1-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A3I1-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FV-A3R2-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FV-A3R2-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-G3-A3CH-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-G3-A3CH-11A-11R-A22J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression

Figure 1.  Get High-res Image This figure depicts the distribution of available data on a per participant basis.

Filtered Samples
Redactions

For TCGA data, redaction is the removal of cases from the data prior to publication or release. Redacted cases are generally rare, but cases must be redacted when the TSS/BCR subject link is incorrect ("unknown patient identity"), or in the case of genotype mismatch, completely wrong cancer, or completely wrong organ/tissue. Redaction occurs regardless of a case's analyte characterization or DCC data deposition status.

Rescission is the removal of samples from the list of redactions. This happens if the reason for redaction is eventually cleared up. For clarity, rescinded redactions do not appear in this report.

There were no redactions.

Replicate Samples

In many instances there is more than one aliquot for a given combination of individual, platform, and data type. However, only one aliquot may be ingested into Firehose. Therefore, a set of precedence rules are applied to select the most scientifically advantageous one among them. Two filters are applied to achieve this aim: an Analyte Replicate Filter and a Sort Replicate Filter.

Analyte Replicate Filter

The following precedence rules are applied when the aliquots have differing analytes. For RNA aliquots, R analytes are preferred over T analytes, since it is the more accurate extraction protocol. For DNA aliquots, D analytes (native DNA) are preferred over G, W, or X (whole-genome amplified) analytes, unless the G, W, or X analyte barcode has a higher plate number.

Sort Replicate Filter

The following precedence rules are applied when the analyte filter still produces more than one sample. The sort filter chooses the aliquot with the highest lexicographical sort value, to ensure that the barcode with the highest portion and/or plate number is selected when all other barcode fields are identical.

There were no replicate samples.

Blacklisted Samples

In certain circumstances, replicate filtering may choose the less favorable among two or more aliquots. For instance, an analyst may manually review two aliquots for a given individual and determine that one is superior. If the replicate filtering would choose the inferior sample, then the inferior sample can be added to this blacklist. This would result in the desired sample being chosen. This table lists those blacklisted samples and a reason for their being blacklisted.

There were no blacklisted samples.

Methods & Data
Redactions

Redaction data was taken from the TCGA Data Portal using the query string:

https://tcga-data.nci.nih.gov/annotations/resources/searchannotations/json?categoryId=CATEGORY_ID

for the following CATEGORY_ID values:

  • 1 = Tumor tissue origin incorrect

  • 2 = Tumor type incorrect

  • 3 = Genotype mismatch

  • 5 = Subject identity unknown

  • 27 = Duplicate case

  • 37 = Administrative Compliance

Preprocessors
mRNA Preprocessor

The mRNA preprocess median module chooses the matrix for the platform(Affymetrix HG U133, Affymetrix Exon Array and Agilent Gene Expression) with the largest number of samples.

mRNAseq Preprocessor

The mRNAseq preprocessor picks the "scaled_estimate" (RSEM) value from Illumina HiSeq/GA2 mRNAseq level_3 (v2) data set and makes the mRNAseq matrix with log2 transformed for the downstream analysis. If there are overlap samples between two different platforms, samples from illumina hiseq will be selected. The pipeline also creates the matrix with RPKM and log2 transform from HiSeq/GA2 mRNAseq level 3 (v1) data set.

miRseq Preprocessor

The miRseq preprocessor picks the "RPM" (reads per million miRNA precursor reads) from the Illumina HiSeq/GA miRseq Level_3 data set and makes the matrix with log2 transformed values.

Methylation Preprocessor

The methylation preprocessor filters methylation data for use in downstream pipelines. To learn more about this preprocessor, please visit the documentation.