stddata__2013_07_15 Samples Summary Report
- Overview
+ Introduction
- Summary

There were 77 redacted samples, 2848 replicate aliquots, and 21 blacklisted aliquots. The table below represents the sample counts for those samples that were ingested into firehose after filtering out redactions, replicates, and blacklisted data.

Table 1.  Get Full Table Summary of TCGA Tumor Data. Click on a tumor type to display a tumor type specific Samples Summary Report.

Tumor BCR Clinical CN LowP Methylation mRNA mRNASeq miR miRSeq RPPA MAF
ACC 92 0 0 0 0 0 0 0 0 0 0
BLCA 201 151 153 111 185 0 149 0 185 127 28
BRCA 1002 934 949 0 928 526 915 0 980 408 772
CESC 163 59 129 0 163 0 116 0 134 0 39
COAD 439 425 422 69 420 153 388 0 407 331 155
COADREAD 608 593 586 104 582 222 538 0 550 461 224
DLBC 28 0 18 0 18 0 0 0 17 0 0
ESCA 63 7 50 15 63 0 0 0 12 0 0
GBM 598 576 580 0 405 542 160 491 0 214 291
HNSC 427 348 372 108 373 0 304 0 372 212 306
KICH 66 64 66 0 66 0 66 0 66 0 65
KIRC 513 503 508 0 511 72 480 0 492 454 417
KIRP 190 118 166 0 142 16 106 0 142 0 111
LAML 200 200 200 0 194 0 179 0 188 0 197
LGG 296 221 222 0 266 27 220 0 295 0 217
LIHC 152 99 110 0 125 0 84 0 136 0 0
LUAD 563 449 495 120 555 32 446 0 488 237 229
LUSC 494 388 417 0 493 154 375 0 468 195 178
OV 592 580 579 0 584 574 296 570 453 412 316
PAAD 66 44 50 0 65 0 40 0 52 0 0
PANCAN12 5723 5196 5337 549 5322 2176 4285 1061 4679 2920 3206
PRAD 250 161 188 15 198 0 176 0 194 0 83
READ 169 168 164 35 162 69 150 0 143 130 69
SARC 111 39 52 0 73 0 32 0 82 0 0
SKCM 357 243 316 119 336 0 282 0 283 205 264
STAD 308 282 308 77 308 0 274 0 308 0 221
THCA 496 475 496 95 496 0 482 0 495 222 402
UCEC 525 474 498 106 512 54 443 0 503 200 248
UCS 57 2 0 0 57 0 0 0 0 0 0
Totals 8418 7010 7508 870 7698 2219 6163 1061 6895 3347 4608
- Results
+ Sample Heatmaps
+ Filtered Samples
+ Methods & Data
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