stddata__2013_08_09 Samples Summary Report
- Overview
+ Introduction
- Summary

There were 77 redacted samples, 2858 replicate aliquots, and 30 blacklisted aliquots. The table below represents the sample counts for those samples that were ingested into firehose after filtering out redactions, replicates, and blacklisted data.

Table 1.  Get Full Table Summary of TCGA Tumor Data. Click on a tumor type to display a tumor type specific Samples Summary Report.

Tumor BCR Clinical CN LowP Methylation mRNA mRNASeq miR miRSeq RPPA MAF
ACC 92 0 0 0 80 0 0 0 0 0 0
BLCA 213 156 185 111 185 0 163 0 185 127 28
BRCA 1014 949 999 0 985 526 915 0 980 408 772
CESC 163 71 158 0 163 0 116 0 134 0 39
COAD 439 425 436 69 435 153 388 0 407 331 155
COADREAD 608 593 600 104 597 222 538 0 550 461 224
DLBC 38 15 18 0 18 0 0 0 17 0 0
ESCA 73 11 63 15 63 0 0 0 12 0 0
GBM 599 576 580 0 405 542 160 491 0 214 291
HNSC 458 349 392 108 373 0 304 0 372 212 306
KICH 66 64 66 0 66 0 66 0 66 0 65
KIRC 513 503 508 0 511 72 480 0 492 454 417
KIRP 204 121 197 0 158 16 106 0 142 0 112
LAML 200 200 200 0 194 0 179 0 188 0 197
LGG 307 222 271 0 266 27 269 0 295 0 220
LIHC 152 116 138 0 125 0 103 0 136 0 0
LUAD 563 456 495 120 555 32 446 0 491 237 229
LUSC 494 389 492 0 493 154 408 0 468 195 178
OV 592 580 579 0 584 574 296 570 453 412 316
PAAD 66 52 66 0 65 0 40 0 52 0 57
PANCAN12 5789 5228 5540 549 5394 2176 4364 1061 4682 2920 3206
PRAD 263 165 197 15 213 0 176 0 194 0 83
READ 169 168 164 35 162 69 150 0 143 130 69
SARC 111 66 83 0 83 0 47 0 82 0 0
SKCM 357 260 336 119 336 0 310 0 283 205 264
STAD 315 289 300 71 300 0 267 0 300 0 221
THCA 496 477 496 95 496 0 482 0 495 222 402
UCEC 535 477 510 106 512 54 475 0 503 200 248
UCS 57 2 53 0 57 0 0 0 0 0 0
Totals 8549 7159 7982 864 7883 2219 6346 1061 6890 3347 4669
- Results
+ Sample Heatmaps
+ Filtered Samples
+ Methods & Data
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