stddata__2013_09_23 Samples Summary Report
- Overview
+ Introduction
- Summary

There were 115 redacted samples, 2463 replicate aliquots, and 23 blacklisted aliquots. The table below represents the sample counts for those samples that were ingested into firehose after filtering out redactions, replicates, and blacklisted data.

Table 1.  Get Full Table Summary of TCGA Tumor Data. Click on a tumor type to display a tumor type specific Samples Summary Report.

Tumor BCR Clinical CN LowP Methylation mRNA mRNASeq miR miRSeq RPPA MAF
ACC 92 0 77 0 80 0 0 0 48 0 0
BLCA 213 158 185 111 201 0 182 0 185 127 28
BRCA 1014 971 1000 0 985 526 988 0 982 408 772
CESC 163 74 158 0 163 0 145 0 134 0 39
COAD 437 431 436 69 434 153 404 0 406 62 154
COADREAD 605 599 600 104 596 222 560 0 549 89 223
DLBC 38 21 18 0 18 0 0 0 17 0 0
ESCA 73 19 63 15 63 0 0 0 12 0 0
GBM 595 575 503 0 393 469 151 416 0 214 290
HNSC 458 360 392 108 426 0 304 0 424 0 306
KICH 66 64 66 0 66 0 66 0 66 0 66
KIRC 513 503 508 0 511 72 480 0 492 0 417
KIRP 204 129 197 0 158 16 141 0 142 0 112
LAML 200 200 200 0 194 0 179 0 188 0 197
LGG 307 243 271 0 291 27 271 0 295 258 220
LIHC 152 127 141 0 125 0 134 0 136 0 0
LUAD 563 456 495 120 555 32 468 0 491 0 229
LUSC 493 394 484 0 484 146 475 0 462 0 178
OV 592 580 564 0 569 569 295 565 452 0 316
PAAD 66 53 62 0 62 0 56 0 59 0 57
PANCAN12 5781 5275 5441 549 5426 2090 4572 981 4728 1038 3204
PRAD 263 166 198 15 248 0 195 0 232 164 83
READ 168 168 164 35 162 69 156 0 143 27 69
SARC 111 74 83 0 83 0 75 0 97 0 0
SKCM 357 280 336 119 336 0 332 0 327 205 264
STAD 322 307 307 66 307 0 273 0 307 263 221
THCA 496 477 496 95 496 0 482 0 495 222 402
UCEC 535 479 510 106 512 54 490 0 503 200 248
UCS 57 15 57 0 57 0 56 0 56 0 0
Totals 8548 7324 7971 859 7979 2133 6798 981 7151 2150 4668
- Results
+ Sample Heatmaps
+ Filtered Samples
+ Methods & Data
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