Redactions
For TCGA data, redaction is the removal of cases from the data prior to publication or release. Redacted cases are generally rare, but cases must be redacted when the TSS/BCR subject link is incorrect ("unknown patient identity"), or in the case of genotype mismatch, completely wrong cancer, or completely wrong organ/tissue. Redaction occurs regardless of a case's analyte characterization or DCC data deposition status.
Rescission is the removal of samples from the list of redactions. This happens if the reason for redaction is eventually cleared up. For clarity, rescinded redactions do not appear in this report.
Table 1. Get Full Table
| Barcode | UUID | Date | Type | Category | Notes |
|---|---|---|---|---|---|
| TCGA-01-0629 | (none) | 09/02/2010 | GBM | Tumor tissue origin incorrect | [intgen.org]: Case was of non-ovarian origin |
| TCGA-02-0002 | (none) | 09/15/2010 | GBM | Genotype mismatch | [intgen.org]: Genotype mismatch |
| TCGA-02-0117 | (none) | 09/15/2010 | GBM | Genotype mismatch | [intgen.org]: Genotype mismatch |
| TCGA-02-2488 | 741c2eb3-db33-4a6c-9878-2587aa375134 | 10/27/2011 | GBM | Genotype mismatch | Note: Scheduled for shipment in B38 but was withdrawn due to SSTR mismatch. Case was uploaded, withdrawal was initiated after upload. Worked with DCC to remove data. |
| TCGA-06-0131 | d75996d6-9f02-4478-a4a1-dfa7ab41de77 | 06/17/2011 | GBM | Subject withdrew consent | [intgen.org]: Subject Withdrew Consent |
| TCGA-06-0748 | c8f21beb-e3ca-4e5e-a386-a486776cfe88 | 10/27/2011 | GBM | Genotype mismatch | Note: Scheduled for shipment in B8 but was withdrawn due to SSTR mismatch. Case was uploaded, withdrawal was initiated after upload. Worked with DCC to remove data. |
| TCGA-08-0384 | (none) | 11/22/2010 | GBM | Genotype mismatch | IGC new redactions as of 11/10/2010 |
| TCGA-12-0653 | a7b55dae-c9b8-45c6-986f-fb1055f1c67b | 09/02/2010 | GBM | Subject withdrew consent | [intgen.org]: Subject Withdrew Consent Subject_Withdrew_Consent_Date=1/12/2010 |
| TCGA-12-1601 | cc1459be-de8f-482e-9efe-65937db9dc45 | 09/02/2010 | GBM | Subject withdrew consent | [intgen.org]: Subject Withdrew Consent Subject_Withdrew_Consent_Date=10/15/2009 |
| TCGA-14-0784 | fc52a226-9306-45d4-b608-4bdda831ad01 | 09/12/2011 | GBM | Genotype mismatch | [intgen.org]: Genotype mismatch |
| TCGA-14-1036 | f45a2391-4c79-4269-8cdd-12a914d6c4b5 | 10/27/2011 | GBM | Genotype mismatch | Note: Scheduled for shipment in B38 but was withdrawn due to SSTR mismatch. Case was uploaded, withdrawal was initiated after upload. Worked with DCC to remove data |
| TCGA-14-1824 | 270b9238-1567-4930-968a-a408b808ea1b | 10/27/2011 | GBM | Genotype mismatch | Note: Scheduled for shipment in B38 but was withdrawn due to SSTR mismatch. Case was uploaded, withdrawal was initiated after upload. Worked with DCC to remove data. |
| TCGA-32-2498 | 0d5e5a6b-5113-43f2-836c-776207b21b56 | 12/19/2010 | GBM | Subject withdrew consent | [intgen.org]: Subject Withdrew Consent Subject_Withdrew_Consent_Date=12/16/2010 |