Pancreatic adenocarcinoma (PAAD) Samples Report
Overview
Introduction

The Broad GDAC mirrors data from the DCC on a daily basis. Although all data is mirrored, not every sample is ingested into Firehose. There are three main mechanisms that filter samples to ensure that only the most scientifically relevant samples make it into our standard data and analyses runs. These three mechanisms are redactions, replicate filtering, and blacklisting. This report summarizes the data that is ingested into Firehose, describes the three filtering mechanisms, lists those samples that are removed, and gives all available annotations from the DCC's Annotation Manager.

Summary

There were 7 redactions, 0 replicate aliquots, 0 blacklisted aliquots, and 0 FFPE aliquots. The table below represents the sample counts for those samples that were ingested into firehose after filtering out redactions, replicates, and blacklisted data, and segregating FFPEs.

Table 1.  This table provides a breakdown of sample counts on a per sample type and, if applicable, per subtype basis. Each count is a link to a table containing a list of the samples that comprise that count and details pertaining to each individual sample (e.g. platform, sequencing center, etc.). Please note, there are usually multiple protocols per data type, so there are typically many more rows than the count implies.

Sample Type BCR Clinical CN LowP Methylation mRNA mRNASeq miR miRSeq RPPA MAF
TP 147 81 91 0 91 0 85 0 85 0 91
NB 78 66 75 0 0 0 0 0 0 0 0
NT 17 11 17 0 9 0 3 0 3 0 0
Totals 147 81 91 0 91 0 85 0 85 0 91
PAAD Primary Solid Tumor BCR Data

Table S1. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-2L-AAQA Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-2L-AAQE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-2L-AAQI Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-2L-AAQJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-2L-AAQL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-2L-AAQM Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9I5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9I7 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9I9 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IB Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IC Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IJ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IN Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3A-A9IU Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3E-AAAY Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-3E-AAAZ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-6879 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-F2-6879 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-6880 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-F2-6880 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-7273 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-F2-7273 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-7276 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-F2-7276 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-A44G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-A44H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-A7TX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-A8YN Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A4P5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A4P6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A545 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A5VM Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A78T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A7DR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-AAPS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5919 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5919 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5920 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5921 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5921 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5922 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5923 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5924 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5924 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5926 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5926 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H6-8124 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-H6-8124 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H6-A45N Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H8-A6C1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A7OL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A7OP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-AA8X Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7289 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7289 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7918 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7918 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7919 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7919 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7920 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7922 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7923 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7924 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7924 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7925 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7925 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7926 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7926 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8001 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8001 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8002 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8002 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8003 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8003 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8005 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8005 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8315 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8315 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8317 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8317 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8519 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8519 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8636 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8636 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8637 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8637 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8638 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8638 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A49G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A49H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A49I Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A4BH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A4BK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A77O Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A77P Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A77Q Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A8P0 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A8P1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7644 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7644 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7645 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7645 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7646 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7646 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7647 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7647 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7649 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7649 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7651 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7651 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7652 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7652 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7654 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7654 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7885 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7885 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7886 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7886 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7887 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7887 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7888 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7888 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7889 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7889 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7890 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7890 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7891 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7891 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7893 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7893 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7897 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7897 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-8126 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-8126 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-8127 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-8127 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5ST Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A6UF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A6UG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A7LX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A7M4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUM Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUN Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUT Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUU Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUV Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-AAUW Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-L1-A7W4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-LB-A7SX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-LB-A8F3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-LB-A9Q5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-M8-A5N4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-OE-A75W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-PZ-A5RE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-Q3-A5QY Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-Q3-AA2A Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-RB-A7B8 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-RB-AA9M Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-RL-AAAS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-S4-A8RM Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-S4-A8RO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-S4-A8RP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A774 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A776 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A779 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A77E Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A77G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A77J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-XD-AAUL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-XN-A8T3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-XN-A8T5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-YB-A89D Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-YH-A8SY Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-YY-A8LH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
PAAD Primary Solid Tumor Clinical Data

Table S2. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-6880 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-7273 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-7276 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-A44G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-A44H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-A7TX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-A8YN Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A4P5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A4P6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A545 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A5VM Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A78T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A7DR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FZ-5920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FZ-5922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FZ-5923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H6-8124 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H6-A45N Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H8-A6C1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7289 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7918 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7919 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7924 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7925 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7926 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8001 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8002 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8003 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8005 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8315 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8317 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8519 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8636 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8637 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8638 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A49G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A49H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A49I Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A4BH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A4BK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7644 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7645 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7646 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7647 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7649 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7651 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7652 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7885 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7886 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7887 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7888 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7889 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7890 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7891 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7893 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7897 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-8126 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-8127 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5ST Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A6UG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A7LX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A7M4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-L1-A7W4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-LB-A7SX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-LB-A8F3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-OE-A75W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-PZ-A5RE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-Q3-A5QY Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A774 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A779 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A77E Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A77G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A77J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
PAAD Primary Solid Tumor CN Data

Table S3. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-6879-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-6879-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-6879-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-6880-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-6880-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-6880-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-6880-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-7273-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-7273-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-7273-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-7273-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-7276-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-7276-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-7276-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-7276-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-A44G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-A44G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-A44G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-A44G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-A44H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-A44H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-A44H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-A44H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A4P5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A4P5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A4P5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A4P5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A545-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A545-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A545-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A545-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A5VM-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A5VM-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A5VM-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A5VM-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A78T-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A78T-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A78T-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A78T-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A7DR-01A-21D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A7DR-01A-21D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A7DR-01A-21D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A7DR-01A-21D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5919-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5919-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5919-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5919-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5920-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5920-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5920-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5920-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5921-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5921-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5921-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5921-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5922-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5922-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5922-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5922-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5923-01A-12D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5923-01A-12D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5923-01A-12D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5923-01A-12D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5924-01A-13D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5924-01A-13D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5924-01A-13D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5924-01A-13D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5926-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5926-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5926-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5926-01A-11D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-H6-8124-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-H6-8124-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-H6-8124-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-H6-8124-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-H6-A45N-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-H6-A45N-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-H6-A45N-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-H6-A45N-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-H8-A6C1-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-H8-A6C1-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-H8-A6C1-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-H8-A6C1-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A3-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A3-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A3-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A3-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A5-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A6-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A6-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A6-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A6-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A7OL-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A7OL-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A7OL-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A7OL-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A7OP-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A7OP-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A7OP-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A7OP-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7289-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7289-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7289-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7289-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7918-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7918-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7918-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7918-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7919-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7919-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7919-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7919-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7920-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7920-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7920-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7920-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7922-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7922-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7922-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7922-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7923-01A-12D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7923-01A-12D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7923-01A-12D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7923-01A-12D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7924-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7924-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7924-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7924-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7925-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7925-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7925-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7925-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7926-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7926-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7926-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7926-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8001-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8001-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8001-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8001-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8002-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8002-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8002-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8002-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8003-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8003-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8003-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8003-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8005-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8005-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8005-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8005-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8315-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8315-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8315-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8315-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8317-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8317-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8317-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8317-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8519-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8519-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8519-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8519-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8636-01A-21D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8636-01A-21D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8636-01A-21D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8636-01A-21D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8637-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8637-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8637-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8637-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8638-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8638-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8638-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8638-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A49G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A49G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A49G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A49G-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A49H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A49H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A49H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A49H-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A49I-01A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A49I-01A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A49I-01A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A49I-01A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A4BH-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A4BH-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A4BH-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A4BH-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A4BK-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A4BK-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A4BK-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A4BK-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A77O-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A77O-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A77O-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A77O-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A77P-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A77P-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A77P-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A77P-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7644-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7644-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7644-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7644-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7645-01A-22D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7645-01A-22D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7645-01A-22D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7645-01A-22D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7646-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7646-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7646-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7646-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7647-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7647-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7647-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7647-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7649-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7649-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7649-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7649-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7651-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7651-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7651-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7651-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7652-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7652-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7652-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7652-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7654-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7654-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7654-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7654-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7885-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7885-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7885-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7885-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7886-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7886-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7886-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7886-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7887-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7887-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7887-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7887-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7888-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7888-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7888-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7888-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7889-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7889-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7889-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7889-01A-11D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7890-01A-12D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7890-01A-12D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7890-01A-12D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7890-01A-12D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7891-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7891-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7891-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7891-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7893-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7893-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7893-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7893-01A-11D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7897-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7897-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7897-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7897-01A-21D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-8126-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-8126-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-8126-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-8126-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-8127-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-8127-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-8127-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-8127-01A-11D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5SO-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5SO-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5SO-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5SO-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5SP-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5SP-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5SP-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5SP-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5SQ-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5SQ-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5SQ-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5SQ-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5SS-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5SS-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5SS-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5SS-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5ST-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5ST-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5ST-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5ST-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A6UF-01A-23D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A6UF-01A-23D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A6UF-01A-23D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A6UF-01A-23D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A6UG-01A-32D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A6UG-01A-32D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A6UG-01A-32D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A6UG-01A-32D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-LB-A7SX-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-LB-A7SX-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-LB-A7SX-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-LB-A7SX-01A-11D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-M8-A5N4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-M8-A5N4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-M8-A5N4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-M8-A5N4-01A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-OE-A75W-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-OE-A75W-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-OE-A75W-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-OE-A75W-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-PZ-A5RE-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-PZ-A5RE-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-PZ-A5RE-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-PZ-A5RE-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-Q3-A5QY-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-Q3-A5QY-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-Q3-A5QY-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-Q3-A5QY-01A-12D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-RB-A7B8-01A-12D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-RB-A7B8-01A-12D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-RB-A7B8-01A-12D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-RB-A7B8-01A-12D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A774-01A-21D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A774-01A-21D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A774-01A-21D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A774-01A-21D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A776-01A-13D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A776-01A-13D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A776-01A-13D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A776-01A-13D-A33S-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A779-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A779-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A779-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A779-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A77E-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A77E-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A77E-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A77E-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A77G-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A77G-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A77G-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A77G-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A77J-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A77J-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A77J-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A77J-01A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
PAAD Primary Solid Tumor Methylation Data

Table S4. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-F2-6880-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-F2-7273-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-F2-7276-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-F2-A44G-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-F2-A44H-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FB-A4P5-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FB-A4P6-01A-12D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FB-A545-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FB-A5VM-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FB-A78T-01A-12D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FB-A7DR-01A-21D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5919-01A-11D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5920-01A-11D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5922-01A-11D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5923-01A-12D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5924-01A-13D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5926-01A-11D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-H6-8124-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-H6-A45N-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-H8-A6C1-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HV-A5A3-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HV-A5A4-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HV-A5A5-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HV-A5A6-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HV-A7OL-01A-11D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HV-A7OP-01A-11D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7289-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7918-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7919-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7920-01A-11D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7922-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7923-01A-12D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7924-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7925-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-7926-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8001-01A-11D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8002-01A-11D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8003-01A-21D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8005-01A-11D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8315-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8317-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8519-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8636-01A-21D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8637-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-8638-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-A49G-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-A49H-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-A49I-01A-12D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-A4BH-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-A4BK-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-A77O-01A-11D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HZ-A77P-01A-11D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7644-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7645-01A-22D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7646-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7647-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7649-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7651-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7652-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7654-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7885-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7886-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7887-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7888-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7889-01A-11D-2157-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7890-01A-12D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7891-01A-11D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7893-01A-11D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-7897-01A-21D-2202-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-8126-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-8127-01A-11D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-A5SO-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-A5SP-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-A5SQ-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-A5SS-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-A5ST-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-A6UF-01A-23D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-IB-A6UG-01A-32D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-LB-A7SX-01A-11D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-M8-A5N4-01A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-OE-A75W-01A-12D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-PZ-A5RE-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-Q3-A5QY-01A-12D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-RB-A7B8-01A-12D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-US-A774-01A-21D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-US-A776-01A-13D-A33U-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-US-A779-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-US-A77E-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-US-A77G-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-US-A77J-01A-11D-A32S-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
PAAD Primary Solid Tumor mRNASeq Data

Table S5. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-F2-6879-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-F2-6879-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-F2-6879-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-F2-6879-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-F2-6880-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-F2-6880-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-F2-6880-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-F2-6880-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-F2-6880-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-F2-7273-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-F2-7273-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-F2-7273-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-F2-7273-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-F2-7273-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-F2-7276-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-F2-7276-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-F2-7276-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-F2-7276-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-F2-7276-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-F2-A44G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-F2-A44G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-F2-A44G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-F2-A44G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-F2-A44G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-F2-A44H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-F2-A44H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-F2-A44H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-F2-A44H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-F2-A44H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FB-A4P5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FB-A4P5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FB-A4P5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FB-A4P5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FB-A4P5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FB-A4P6-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FB-A4P6-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FB-A4P6-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FB-A4P6-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FB-A4P6-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FB-A545-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FB-A545-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FB-A545-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FB-A545-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FB-A545-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FB-A5VM-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FB-A5VM-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FB-A5VM-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FB-A5VM-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FB-A5VM-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FB-A78T-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FB-A78T-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FB-A78T-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FB-A78T-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FB-A78T-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-FB-A7DR-01A-21R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-FB-A7DR-01A-21R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-FB-A7DR-01A-21R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-FB-A7DR-01A-21R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-FB-A7DR-01A-21R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-H6-8124-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-H6-8124-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-H6-8124-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-H6-8124-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-H6-8124-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-H6-A45N-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-H6-A45N-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-H6-A45N-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-H6-A45N-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-H6-A45N-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-H8-A6C1-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-H8-A6C1-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-H8-A6C1-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-H8-A6C1-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-H8-A6C1-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HV-A5A3-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HV-A5A3-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HV-A5A3-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HV-A5A3-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HV-A5A3-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HV-A5A4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HV-A5A4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HV-A5A4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HV-A5A4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HV-A5A4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HV-A5A5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HV-A5A5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HV-A5A5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HV-A5A5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HV-A5A5-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HV-A5A6-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HV-A5A6-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HV-A5A6-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HV-A5A6-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HV-A5A6-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HV-A7OL-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HV-A7OL-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HV-A7OL-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HV-A7OL-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HV-A7OL-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HV-A7OP-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HV-A7OP-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HV-A7OP-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HV-A7OP-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HV-A7OP-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7289-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7289-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7289-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7289-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7289-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7918-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7918-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7918-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7918-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7918-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7919-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7919-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7919-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7919-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7919-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7920-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7920-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7920-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7920-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7920-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7922-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7922-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7922-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7922-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7922-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7923-01A-12R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7923-01A-12R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7923-01A-12R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7923-01A-12R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7923-01A-12R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7924-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7924-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7924-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7924-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7924-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7925-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7925-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7925-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7925-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7925-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-7926-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-7926-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-7926-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-7926-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-7926-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8001-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8001-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8001-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8001-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8001-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8002-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8002-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8002-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8002-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8002-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8003-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8003-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8003-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8003-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8003-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8005-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8005-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8005-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8005-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8005-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8315-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8315-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8315-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8315-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8315-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8317-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8317-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8317-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8317-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8317-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8519-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8519-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8519-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8519-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8519-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8636-01A-21R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8636-01A-21R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8636-01A-21R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8636-01A-21R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8636-01A-21R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8637-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8637-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8637-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8637-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8637-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-8638-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-8638-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-8638-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-8638-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-8638-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-A49G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-A49G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-A49G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-A49G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-A49G-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-A49H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-A49H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-A49H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-A49H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-A49H-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-A49I-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-A49I-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-A49I-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-A49I-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-A49I-01A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-A4BH-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-A4BH-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-A4BH-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-A4BH-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-A4BH-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-A4BK-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-A4BK-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-A4BK-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-A4BK-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-A4BK-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-A77O-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-A77O-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-A77O-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-A77O-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-A77O-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HZ-A77P-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HZ-A77P-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HZ-A77P-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HZ-A77P-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HZ-A77P-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7644-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7644-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7644-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7644-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7644-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7645-01A-22R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7645-01A-22R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7645-01A-22R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7645-01A-22R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7645-01A-22R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7646-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7646-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7646-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7646-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7646-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7647-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7647-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7647-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7647-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7647-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7649-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7649-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7649-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7649-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7649-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7651-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7651-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7651-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7651-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7651-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7652-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7652-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7652-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7652-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7652-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7654-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7654-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7654-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7654-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7654-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7885-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7885-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7885-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7885-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7885-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7886-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7886-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7886-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7886-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7886-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7887-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7887-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7887-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7887-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7887-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7888-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7888-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7888-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7888-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7888-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7889-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7889-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7889-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7889-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7889-01A-11R-2156-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7890-01A-12R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7890-01A-12R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7890-01A-12R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7890-01A-12R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7890-01A-12R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7891-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7891-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7891-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7891-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7891-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7893-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7893-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7893-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7893-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7893-01A-11R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-7897-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-7897-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-7897-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-7897-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-7897-01A-21R-2204-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-8126-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-8126-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-8126-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-8126-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-8126-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-8127-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-8127-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-8127-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-8127-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-8127-01A-11R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-A5SO-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-A5SO-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-A5SO-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-A5SO-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-A5SO-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-A5SP-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-A5SP-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-A5SP-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-A5SP-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-A5SP-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-A5SQ-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-A5SQ-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-A5SQ-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-A5SQ-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-A5SQ-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-A5SS-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-A5SS-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-A5SS-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-A5SS-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-A5SS-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-A5ST-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-A5ST-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-A5ST-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-A5ST-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-A5ST-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-A6UF-01A-23R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-A6UF-01A-23R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-A6UF-01A-23R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-A6UF-01A-23R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-A6UF-01A-23R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-IB-A6UG-01A-32R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-IB-A6UG-01A-32R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-IB-A6UG-01A-32R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-IB-A6UG-01A-32R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-IB-A6UG-01A-32R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-LB-A7SX-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-LB-A7SX-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-LB-A7SX-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-LB-A7SX-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-LB-A7SX-01A-11R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-M8-A5N4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-M8-A5N4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-M8-A5N4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-M8-A5N4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-M8-A5N4-01A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-OE-A75W-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-OE-A75W-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-OE-A75W-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-OE-A75W-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-OE-A75W-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-PZ-A5RE-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-PZ-A5RE-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-PZ-A5RE-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-PZ-A5RE-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-PZ-A5RE-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-Q3-A5QY-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-Q3-A5QY-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-Q3-A5QY-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-Q3-A5QY-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-Q3-A5QY-01A-12R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-RB-A7B8-01A-12R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-RB-A7B8-01A-12R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-RB-A7B8-01A-12R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-RB-A7B8-01A-12R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-RB-A7B8-01A-12R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-US-A774-01A-21R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-US-A774-01A-21R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-US-A774-01A-21R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-US-A774-01A-21R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-US-A774-01A-21R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-US-A776-01A-13R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-US-A776-01A-13R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-US-A776-01A-13R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-US-A776-01A-13R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-US-A776-01A-13R-A33R-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-US-A779-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-US-A779-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-US-A779-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-US-A779-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-US-A779-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-US-A77E-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-US-A77E-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-US-A77E-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-US-A77E-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-US-A77E-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-US-A77G-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-US-A77G-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-US-A77G-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-US-A77G-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-US-A77G-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-US-A77J-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-US-A77J-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-US-A77J-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-US-A77J-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-US-A77J-01A-11R-A32O-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
PAAD Primary Solid Tumor miRSeq Data

Table S6. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-F2-6879-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-F2-6880-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-F2-6880-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-F2-7273-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-F2-7273-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-F2-7276-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-F2-7276-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-F2-A44G-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-F2-A44G-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-F2-A44H-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-F2-A44H-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FB-A4P5-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FB-A4P5-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FB-A4P6-01A-12R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FB-A4P6-01A-12R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FB-A545-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FB-A545-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FB-A5VM-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FB-A5VM-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FB-A78T-01A-12R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FB-A78T-01A-12R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-FB-A7DR-01A-21R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-FB-A7DR-01A-21R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-H6-8124-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-H6-8124-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-H6-A45N-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-H6-A45N-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-H8-A6C1-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-H8-A6C1-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HV-A5A3-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HV-A5A3-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HV-A5A4-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HV-A5A4-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HV-A5A5-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HV-A5A5-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HV-A5A6-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HV-A5A6-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HV-A7OL-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HV-A7OL-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HV-A7OP-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HV-A7OP-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7289-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7289-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7918-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7918-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7919-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7919-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7920-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7920-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7922-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7922-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7923-01A-12R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7923-01A-12R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7924-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7924-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7925-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7925-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-7926-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-7926-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8001-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8001-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8002-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8002-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8003-01A-21R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8003-01A-21R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8005-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8005-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8315-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8315-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8317-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8317-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8519-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8519-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8636-01A-21R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8636-01A-21R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8637-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8637-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-8638-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-8638-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-A49G-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-A49G-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-A49H-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-A49H-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-A49I-01A-12R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-A49I-01A-12R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-A4BH-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-A4BH-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-A4BK-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-A4BK-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-A77O-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-A77O-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HZ-A77P-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HZ-A77P-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7644-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7644-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7645-01A-22R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7645-01A-22R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7646-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7646-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7647-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7647-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7649-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7649-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7651-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7651-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7652-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7652-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7654-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7654-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7885-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7885-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7886-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7886-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7887-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7887-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7888-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7888-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7889-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7889-01A-11R-2155-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7890-01A-12R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7890-01A-12R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7891-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7891-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7893-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7893-01A-11R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-7897-01A-21R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-7897-01A-21R-2203-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-8126-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-8126-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-8127-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-8127-01A-11R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-A5SO-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-A5SO-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-A5SP-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-A5SP-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-A5SQ-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-A5SQ-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-A5SS-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-A5SS-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-A5ST-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-A5ST-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-A6UF-01A-23R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-A6UF-01A-23R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-IB-A6UG-01A-32R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-IB-A6UG-01A-32R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-LB-A7SX-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-LB-A7SX-01A-11R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-M8-A5N4-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-M8-A5N4-01A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-OE-A75W-01A-12R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-OE-A75W-01A-12R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-PZ-A5RE-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-PZ-A5RE-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-Q3-A5QY-01A-12R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-Q3-A5QY-01A-12R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-RB-A7B8-01A-12R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-RB-A7B8-01A-12R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-US-A774-01A-21R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-US-A774-01A-21R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-US-A776-01A-13R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-US-A776-01A-13R-A343-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-US-A779-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-US-A779-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-US-A77E-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-US-A77E-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-US-A77G-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-US-A77G-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-US-A77J-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-US-A77J-01A-11R-A32J-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
PAAD Primary Solid Tumor MAF Data

Table S7. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-F2-6880-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-F2-7273-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-F2-7276-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-F2-A44G-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-F2-A44H-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FB-A4P5-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FB-A4P6-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FB-A545-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FB-A5VM-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FB-A78T-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FB-A7DR-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FZ-5919-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FZ-5920-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FZ-5921-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FZ-5922-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FZ-5923-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FZ-5924-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-FZ-5926-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-H6-8124-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-H6-A45N-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-H8-A6C1-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HV-A5A3-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HV-A5A4-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HV-A5A5-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HV-A5A6-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HV-A7OL-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HV-A7OP-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7289-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7918-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7919-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7920-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7922-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7923-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7924-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7925-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-7926-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8001-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8002-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8003-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8005-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8315-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8317-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8636-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8637-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-8638-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-A49G-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-A49H-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-A49I-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-A4BH-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-A4BK-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-A77O-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-HZ-A77P-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7644-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7645-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7646-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7647-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7649-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7651-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7652-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7654-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7885-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7886-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7887-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7888-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7889-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7890-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7891-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7893-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-7897-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-8126-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-8127-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-A5SO-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-A5SP-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-A5SQ-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-A5SS-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-A5ST-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-A6UF-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-IB-A6UG-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-LB-A7SX-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-M8-A5N4-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-OE-A75W-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-PZ-A5RE-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-Q3-A5QY-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-RB-A7B8-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-US-A774-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-US-A776-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-US-A779-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-US-A77E-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-US-A77G-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
TCGA-US-A77J-01 Illumina Genome Analyzer DNA Sequencing Broad Institute 2 Mutation_Calling
PAAD Blood Derived Normal BCR Data

Table S8. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-F2-6879 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-6880 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-F2-6880 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-7276 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-F2-7276 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-A44G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-F2-A44H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A4P5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A4P6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A545 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A5VM Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A78T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FB-A7DR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H6-8124 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-H6-8124 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H6-A45N Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H8-A6C1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A7OL Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A7OP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7289 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7289 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7918 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7918 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7919 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7919 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7920 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7922 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7923 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7924 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7924 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7925 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7925 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-7926 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-7926 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8001 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8001 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8002 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8002 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8003 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8003 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8005 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8005 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8315 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8315 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8317 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8317 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8519 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8519 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8636 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8636 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8637 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8637 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-8638 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-HZ-8638 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A49G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A49H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A49I Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A4BH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A4BK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A77O Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HZ-A77P Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7644 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7644 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7645 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7645 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7646 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7646 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7647 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7647 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7649 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7649 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7651 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7651 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7652 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7652 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7654 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7654 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7885 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7885 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7886 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7886 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7887 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7887 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7888 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7888 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7889 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7889 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7890 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7890 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7891 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7891 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7893 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7893 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-7897 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-7897 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-8126 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-8126 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-8127 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-IB-8127 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5SS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A5ST Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A6UF Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-IB-A6UG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-LB-A7SX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-M8-A5N4 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-OE-A75W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-PZ-A5RE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-Q3-A5QY Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-RB-A7B8 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
PAAD Blood Derived Normal Clinical Data

Table S9. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-6880 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-7276 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-A44G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-F2-A44H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A4P5 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A4P6 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A545 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A5VM Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A78T Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FB-A7DR Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H6-8124 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H6-A45N Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H8-A6C1 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7289 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7918 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7919 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7924 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7925 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-7926 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8001 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8002 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8003 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8005 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8315 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8317 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8519 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8636 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8637 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-8638 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A49G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A49H Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A49I Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A4BH Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-HZ-A4BK Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7644 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7645 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7646 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7647 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7649 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7651 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7652 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7885 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7886 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7887 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7888 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7889 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7890 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7891 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7893 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-7897 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-8126 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-8127 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SO Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SP Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SQ Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5SS Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A5ST Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-IB-A6UG Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-LB-A7SX Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-OE-A75W Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-PZ-A5RE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-Q3-A5QY Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
PAAD Blood Derived Normal CN Data

Table S10. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-F2-6879-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-6879-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-6879-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-6879-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-6880-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-6880-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-6880-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-6880-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-7276-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-7276-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-7276-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-7276-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-A44G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-A44G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-A44G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-A44G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-F2-A44H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-F2-A44H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-F2-A44H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-F2-A44H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A4P5-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A4P5-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A4P5-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A4P5-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A4P6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A4P6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A4P6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A4P6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A545-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A545-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A545-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A545-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A5VM-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A5VM-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A5VM-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A5VM-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A78T-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A78T-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A78T-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A78T-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FB-A7DR-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FB-A7DR-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FB-A7DR-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FB-A7DR-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-H6-8124-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-H6-8124-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-H6-8124-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-H6-8124-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-H8-A6C1-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-H8-A6C1-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-H8-A6C1-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-H8-A6C1-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A3-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A3-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A3-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A3-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A6-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A7OL-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A7OL-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A7OL-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A7OL-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A7OP-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A7OP-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A7OP-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A7OP-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7289-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7289-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7289-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7289-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7918-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7918-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7918-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7918-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7919-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7919-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7919-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7919-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7920-10B-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7920-10B-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7920-10B-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7920-10B-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7922-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7922-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7922-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7922-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7923-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7923-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7923-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7923-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7924-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7924-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7924-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7924-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7925-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7925-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7925-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7925-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-7926-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-7926-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-7926-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-7926-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8001-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8001-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8001-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8001-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8002-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8002-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8002-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8002-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8003-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8003-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8003-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8003-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8005-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8005-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8005-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8005-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8315-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8315-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8315-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8315-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8317-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8317-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8317-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8317-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8519-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8519-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8519-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8519-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8636-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8636-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8636-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8636-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8637-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8637-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8637-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8637-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-8638-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-8638-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-8638-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-8638-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A49G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A49G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A49G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A49G-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A49H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A49H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A49H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A49H-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A49I-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A49I-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A49I-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A49I-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A4BH-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A4BH-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A4BH-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A4BH-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A4BK-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A4BK-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A4BK-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A4BK-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A77O-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A77O-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A77O-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A77O-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HZ-A77P-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HZ-A77P-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HZ-A77P-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HZ-A77P-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7644-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7644-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7644-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7644-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7645-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7645-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7645-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7645-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7646-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7646-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7646-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7646-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7647-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7647-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7647-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7647-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7649-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7649-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7649-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7649-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7651-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7651-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7651-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7651-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7652-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7652-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7652-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7652-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7654-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7654-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7654-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7654-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7885-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7885-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7885-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7885-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7886-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7886-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7886-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7886-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7887-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7887-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7887-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7887-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7888-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7888-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7888-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7888-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7889-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7889-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7889-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7889-10A-01D-2153-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7890-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7890-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7890-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7890-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7891-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7891-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7891-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7891-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7893-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7893-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7893-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7893-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-7897-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-7897-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-7897-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-7897-10A-01D-2200-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-8126-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-8126-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-8126-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-8126-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-8127-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-8127-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-8127-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-8127-10A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5SO-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5SO-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5SO-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5SO-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5SQ-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5SQ-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5SQ-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5SQ-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5SS-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5SS-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5SS-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5SS-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A5ST-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A5ST-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A5ST-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A5ST-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A6UF-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A6UF-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A6UF-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A6UF-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-IB-A6UG-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-IB-A6UG-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-IB-A6UG-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-IB-A6UG-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-LB-A7SX-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-LB-A7SX-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-LB-A7SX-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-LB-A7SX-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-M8-A5N4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-M8-A5N4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-M8-A5N4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-M8-A5N4-10A-01D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-OE-A75W-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-OE-A75W-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-OE-A75W-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-OE-A75W-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-PZ-A5RE-10B-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-PZ-A5RE-10B-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-PZ-A5RE-10B-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-PZ-A5RE-10B-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-Q3-A5QY-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-Q3-A5QY-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-Q3-A5QY-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-Q3-A5QY-10A-01D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-RB-A7B8-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-RB-A7B8-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-RB-A7B8-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-RB-A7B8-10A-01D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
PAAD Solid Tissue Normal BCR Data

Table S11. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-FZ-5919 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5919 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5920 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5921 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5921 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5922 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5923 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5924 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5924 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-FZ-5926 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-FZ-5926 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H6-8124 Biospecimen Metadata - Complete Set International Genomics Consortium 1 biospecimen
TCGA-H6-8124 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-H6-A45N Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-HV-A5A3 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-PZ-A5RE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A774 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A776 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A779 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A77E Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A77G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
TCGA-US-A77J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 biospecimen
PAAD Solid Tissue Normal Clinical Data

Table S12. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-FZ-5920 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FZ-5922 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-FZ-5923 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H6-8124 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-H6-A45N Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-PZ-A5RE Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A774 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A779 Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A77E Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A77G Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
TCGA-US-A77J Biospecimen Metadata - Complete Set Nationwide Children's Hospital 1 clinical
PAAD Solid Tissue Normal CN Data

Table S13. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-FZ-5919-11A-02D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5919-11A-02D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5919-11A-02D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5919-11A-02D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5920-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5920-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5920-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5920-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5921-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5921-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5921-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5921-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5922-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5922-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5922-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5922-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5923-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5923-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5923-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5923-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5924-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5924-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5924-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5924-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-FZ-5926-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-FZ-5926-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-FZ-5926-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-FZ-5926-11A-01D-1608-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-H6-8124-11A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-H6-8124-11A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-H6-8124-11A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-H6-8124-11A-01D-2392-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-H6-A45N-11A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-H6-A45N-11A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-H6-A45N-11A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-H6-A45N-11A-12D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-HV-A5A3-11A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-HV-A5A3-11A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-HV-A5A3-11A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-HV-A5A3-11A-11D-A26H-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-PZ-A5RE-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-PZ-A5RE-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-PZ-A5RE-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-PZ-A5RE-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A774-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A774-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A774-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A774-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A776-11A-11D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A776-11A-11D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A776-11A-11D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A776-11A-11D-A33V-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A779-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A779-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A779-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A779-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A77E-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A77E-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A77E-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A77E-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A77G-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A77G-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A77G-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A77G-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
TCGA-US-A77J-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg18
TCGA-US-A77J-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_hg19
TCGA-US-A77J-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg18
TCGA-US-A77J-11A-11D-A32M-01 Affymetrix Genome-Wide Human SNP Array 6.0 Broad Institute 3 segmented_scna_minus_germline_cnv_hg19
PAAD Solid Tissue Normal Methylation Data

Table S14. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-FZ-5919-11A-02D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5920-11A-01D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5922-11A-01D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5923-11A-01D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5924-11A-01D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-FZ-5926-11A-01D-1744-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-H6-8124-11A-01D-2399-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-H6-A45N-11A-12D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
TCGA-HV-A5A3-11A-11D-A26Q-05 Illumina Infinium Human DNA Methylation 450 Johns Hopkins / University of Southern California 3 within_bioassay_data_set_function
PAAD Solid Tissue Normal mRNASeq Data

Table S15. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-H6-8124-11A-01R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-H6-8124-11A-01R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-H6-8124-11A-01R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-H6-8124-11A-01R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-H6-8124-11A-01R-2404-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-H6-A45N-11A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-H6-A45N-11A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-H6-A45N-11A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-H6-A45N-11A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-H6-A45N-11A-12R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
TCGA-HV-A5A3-11A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes
TCGA-HV-A5A3-11A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_genes_normalized
TCGA-HV-A5A3-11A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 RSEM_isoforms_normalized
TCGA-HV-A5A3-11A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 exon_quantification
TCGA-HV-A5A3-11A-11R-A26U-07 Illumina HiSeq 2000 RNA Sequencing Version 2 analysis University of North Carolina 3 junction_quantification
PAAD Solid Tissue Normal miRSeq Data

Table S16. 

TCGA Barcode Platform Center Data Level Protocol
TCGA-H6-8124-11A-01R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-H6-8124-11A-01R-2401-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-H6-A45N-11A-12R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-H6-A45N-11A-12R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression
TCGA-HV-A5A3-11A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_gene_expression
TCGA-HV-A5A3-11A-11R-A26Y-13 Illumina HiSeq 2000 miRNA Sequencing Canada's Michael Smith Genome Sciences Centre 3 miR_isoform_expression

The sample type short letter codes in the table above are defined in the following list.

  • TP: Primary Solid Tumor

  • TR: Recurrent Solid Tumor

  • TB: Primary Blood Derived Cancer - Peripheral Blood

  • TAP: Additional - New Primary

  • TM: Metastatic

  • TAM: Additional Metastatic

  • NB: Blood Derived Normal

  • NT: Solid Tissue Normal

The following platforms are outdated and are not included in the counts depicted in the table above.

  • Agilent SurePrint G3 Human CGH Microarray Kit 1x1M

  • Agilent Human Genome CGH Microarray 244A

  • Agilent Human Genome CGH Custom Microarray 2x415K

  • Affymetrix Human Exon 1.0 ST Array

  • Illumina DNA Methylation OMA002 Cancer Panel I

  • Illumina DNA Methylation OMA003 Cancer Panel I

  • Illumina Human1M-Duo BeadChip

  • Illumina 550K Infinium HumanHap550 SNP Chip

Figure 1.  Get High-res Image This figure depicts the distribution of available data on a per participant basis.

Results
Methods & Data
Redactions and Other Annotations

Annotation data was taken from theTCGA Data Portalusing the query string:

https://tcga-data.nci.nih.gov/annotations/resources/searchannotations/json?item=TCGA

Redaction information was generated by filtering for the annotationClassificationName "Redaction"

FFPE information was generated by filtering for "FFPE" in annotation note text

Additional FFPEs were garnered from clinical data

Remaining annotations were sorted into sections by annotationClassificationName

Preprocessors
mRNA Preprocessor

The mRNA preprocess median module chooses the matrix for the platform(Affymetrix HG U133, Affymetrix Exon Array and Agilent Gene Expression) with the largest number of samples.

mRNAseq Preprocessor

The mRNAseq preprocessor picks the "scaled_estimate" (RSEM) value from Illumina HiSeq/GA2 mRNAseq level_3 (v2) data set and makes the mRNAseq matrix with log2 transformed for the downstream analysis. If there are overlap samples between two different platforms, samples from illumina hiseq will be selected. The pipeline also creates the matrix with RPKM and log2 transform from HiSeq/GA2 mRNAseq level 3 (v1) data set.

miRseq Preprocessor

The miRseq preprocessor picks the "RPM" (reads per million miRNA precursor reads) from the Illumina HiSeq/GA miRseq Level_3 data set and makes the matrix with log2 transformed values.

Methylation Preprocessor

The methylation preprocessor filters methylation data for use in downstream pipelines. To learn more about this preprocessor, please visit the documentation.