Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
HES3	390992	hgsc.bcm.edu	37	1	6305292	6305292	+	Missense_Mutation	SNP	C	C	A	rs61760836		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
HES3	390992	hgsc.bcm.edu	37	1	6305303	6305303	+	Silent	SNP	C	C	A	rs61760837		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FBXO42	54455	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	16580181	16580181	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
BRDT	676	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	92446707	92446707	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SLC35A3	23443	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	100483292	100483292	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PRPF38B	55119	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	109235422	109235425	+	Frame_Shift_Del	DEL	CTTA	CTTA	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	CTTA	CTTA	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RSBN1	54665	hgsc.bcm.edu	37	1	114354654	114354654	+	Silent	SNP	T	T	C	rs3195954	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CA14	23632	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	150232559	150232559	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SCAMP3	10067	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	155227427	155227429	+	In_Frame_Del	DEL	AGG	AGG	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	AGG	AGG	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
C1orf106	55765	hgsc.bcm.edu	37	1	200880978	200880978	+	Missense_Mutation	SNP	C	C	T	rs296520	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TNNT2	7139	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	201338962	201338962	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
EPHX1	2052	broad.mit.edu;bcgsc.ca	37	1	226032262	226032264	+	In_Frame_Del	DEL	CTC	CTC	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
IRF2BP2	359948	hgsc.bcm.edu	37	1	234744413	234744413	+	Silent	SNP	C	C	A	rs4636	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RYR2	6262	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	237580422	237580422	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TET1	80312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	70406351	70406351	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
HKDC1	80201	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	71017117	71017117	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
BTAF1	9044	hgsc.bcm.edu	37	10	93726392	93726392	+	Splice_Site	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NFKB2	4791	hgsc.bcm.edu	37	10	104159196	104159196	+	Silent	SNP	A	A	G	rs4919633	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SORCS3	22986	hgsc.bcm.edu;bcgsc.ca	37	10	106976865	106976865	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SMC3	9126	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	112341738	112341738	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PWWP2B	170394	hgsc.bcm.edu	37	10	134219045	134219045	+	Silent	SNP	C	C	T	rs11146364	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KNDC1	85442	bcgsc.ca	37	10	135010635	135010635	+	Missense_Mutation	SNP	G	G	A	rs41317288	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KNDC1	85442	hgsc.bcm.edu	37	10	135012429	135012429	+	Missense_Mutation	SNP	T	T	A	rs3008390		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SYT8	90019	hgsc.bcm.edu	37	11	1858572	1858572	+	Missense_Mutation	SNP	C	C	T	rs2292474	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PRKCDBP	112464	hgsc.bcm.edu	37	11	6341365	6341365	+	Silent	SNP	C	C	T	rs11544764	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
OR10A4	283297	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	6898684	6898684	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
MRGPRX4	117196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	18195200	18195200	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
GAL3ST3	89792	hgsc.bcm.edu	37	11	65810209	65810209	+	Silent	SNP	C	C	T	rs61895584	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PPP1CA	5499	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	67166486	67166487	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	AG	AG	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CCDC81	60494	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	86086270	86086270	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TRIM49C	642612	broad.mit.edu	37	11	89774252	89774252	+	Missense_Mutation	SNP	G	G	A	rs672762	bycluster;bysubmitter	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ATM	472	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	108123627	108123627	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
BHLHE41	79365	hgsc.bcm.edu	37	12	26275827	26275827	+	Silent	SNP	C	C	G	rs61754129		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ITPR2	3709	ucsc.edu;bcgsc.ca	37	12	26732987	26732987	+	Silent	SNP	G	G	A	rs2230376	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KRT78	196374	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	53233007	53233007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
AMHR2	269	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	53822782	53822782	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LRIG3	121227	broad.mit.edu	37	12	59284579	59284579	+	Splice_Site	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LRIG3	121227	hgsc.bcm.edu	37	12	59313936	59313936	+	Silent	SNP	T	T	G	rs61754220	bycluster;byfrequency;by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ATXN7L3B	552889	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	74932091	74932092	+	Frame_Shift_Del	DEL	AA	AA	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	AA	AA	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NAV3	89795	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	78583826	78583826	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NEDD1	121441	broad.mit.edu;bcgsc.ca	37	12	97338562	97338562	+	Missense_Mutation	SNP	C	C	T	rs144294186		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FAM109A	144717	hgsc.bcm.edu	37	12	111800827	111800835	+	In_Frame_Del	DEL	GCCACCCCC	GCCACCCCC	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	GCCACCCCC	GCCACCCCC	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RNFT2	84900	hgsc.bcm.edu	37	12	117187907	117187907	+	Silent	SNP	T	T	C	rs111256849	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ATP6V0A2	23545	hgsc.bcm.edu;broad.mit.edu	37	12	124232193	124232196	+	Frame_Shift_Del	DEL	TCTT	TCTT	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	TCTT	TCTT	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RIMBP2	23504	hgsc.bcm.edu	37	12	130921471	130921471	+	Silent	SNP	T	T	C	rs2292663	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZMYM2	7750	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	20641036	20641036	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
MIPEP	4285	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	24304549	24304549	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CTAGE10P	220429	ucsc.edu;bcgsc.ca	37	13	50466316	50466316	+	RNA	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CCDC168	643677	broad.mit.edu	37	13	103397238	103397238	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FOXG1	2290	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	14	29237445	29237445	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PAPLN	89932	broad.mit.edu;bcgsc.ca	37	14	73711367	73711367	+	Silent	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LGMN	5641	bcgsc.ca	37	14	93170993	93170993	+	Silent	SNP	C	C	T	rs9791	bycluster;byfrequency;byhapmap;by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
AHNAK2	113146	broad.mit.edu	37	14	105412335	105412335	+	Silent	SNP	C	C	T	rs202104959	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
UBE3A	7337	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	25616489	25616489	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
AQR	9716	broad.mit.edu	37	15	35176926	35176926	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CALML4	91860	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	68491886	68491886	+	Silent	SNP	G	G	A	rs200702934	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FBXO22	26263	broad.mit.edu	37	15	76225142	76225142	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PDIA2	64714	hgsc.bcm.edu	37	16	334685	334685	+	Missense_Mutation	SNP	G	G	A	rs200919010		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PKD1	5310	hgsc.bcm.edu	37	16	2156447	2156447	+	Silent	SNP	G	G	A	rs2003782	bycluster;byfrequency;by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ABCC6P1	653190	broad.mit.edu	37	16	18593483	18593484	+	RNA	DEL	CT	CT	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RRN3P3	100131998	bcgsc.ca	37	16	22441095	22441095	+	RNA	SNP	A	A	G	rs78137544		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LCMT1	51451	broad.mit.edu	37	16	25143773	25143773	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SEZ6L2	26470	hgsc.bcm.edu	37	16	29908433	29908433	+	Missense_Mutation	SNP	C	C	G	rs11649499	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
VPS35	55737	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	46714715	46714715	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
IRX3	79191	hgsc.bcm.edu	37	16	54318528	54318528	+	Missense_Mutation	SNP	A	A	G	rs1450355		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
WWP2	11060	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	69874080	69874080	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LOC100506060	0	broad.mit.edu	37	16	70253717	70253717	+	RNA	DEL	A	A	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ELP5	23587	bcgsc.ca	37	17	7155861	7155861	+	Missense_Mutation	SNP	G	G	A	rs2521988	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SUZ12P1	440423	bcgsc.ca	37	17	29086477	29086477	+	RNA	SNP	A	A	C	rs112053209		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LRRC37A11P	342666	broad.mit.edu;bcgsc.ca	37	17	37188240	37188240	+	RNA	SNP	C	C	T	rs34700711	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
GSDMA	284110	bcgsc.ca	37	17	38121993	38121993	+	Missense_Mutation	SNP	G	G	A	rs3894194	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KRT27	342574	bcgsc.ca	37	17	38936017	38936017	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KRTAP4-7	100132476	hgsc.bcm.edu	37	17	39240789	39240803	+	In_Frame_Del	DEL	CGCCCCAGCTGCTGC	CGCCCCAGCTGCTGC	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	CGCCCCAGCTGCTGC	CGCCCCAGCTGCTGC	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
C17orf53	78995	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	42225398	42225398	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ABCC3	8714	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	48741342	48741342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
HEATR6	63897	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	58151224	58151224	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TMEM200C	645369	hgsc.bcm.edu	37	18	5890571	5890571	+	Missense_Mutation	SNP	T	T	C	rs7506026		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ANKRD20A5P	440482	ucsc.edu	37	18	14183747	14183747	+	RNA	SNP	T	T	C	rs62085006		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ARID3A	1820	hgsc.bcm.edu	37	19	929678	929678	+	Silent	SNP	G	G	A	rs3826948		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ARID3A	1820	hgsc.bcm.edu	37	19	929753	929753	+	Silent	SNP	A	A	G	rs1799595		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FZR1	51343	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	3525978	3525978	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZNF414	84330	hgsc.bcm.edu	37	19	8576670	8576670	+	Silent	SNP	C	C	T	rs7175	byfrequency;by2hit2allele;by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
DDX39A	10212	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	14520224	14520224	+	Missense_Mutation	SNP	C	C	T	rs188717433		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
GDF1	2657	hgsc.bcm.edu	37	19	18980172	18980172	+	Missense_Mutation	SNP	G	G	A	rs4808863	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
C19orf12	83636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	30199201	30199201	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LRP3	4037	hgsc.bcm.edu	37	19	33698018	33698018	+	Missense_Mutation	SNP	C	C	T	rs11539586		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FBXO17	115290	hgsc.bcm.edu	37	19	39440918	39440918	+	Silent	SNP	T	T	C	rs2304117	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SPTBN4	57731	hgsc.bcm.edu	37	19	41025758	41025758	+	Silent	SNP	G	G	A	rs201389714		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NTN5	126147	hgsc.bcm.edu	37	19	49164952	49164952	+	Silent	SNP	A	A	G	rs281392	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SEC1P	653677	bcgsc.ca	37	19	49168098	49168098	+	RNA	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SHANK1	50944	broad.mit.edu	37	19	51215270	51215270	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SIGLEC5	8778	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	52132321	52132321	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TPO	7173	hgsc.bcm.edu	37	2	1481231	1481231	+	Missense_Mutation	SNP	G	G	C	rs2175977	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
XDH	7498	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	31628802	31628802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CRIM1	51232	broad.mit.edu	37	2	36706642	36706642	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CCDC88A	55704	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	55566683	55566683	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
INO80B-WBP1	0	bcgsc.ca	37	2	74686937	74686937	+	RNA	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SOWAHC	65124	hgsc.bcm.edu	37	2	110372192	110372192	+	Silent	SNP	A	A	G	rs6594048		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ARHGAP15	55843	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	144381828	144381828	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RESP18	389075	broad.mit.edu	37	2	220197321	220197321	+	Missense_Mutation	SNP	C	C	T	rs2385405	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZCCHC3	85364	hgsc.bcm.edu	37	20	278515	278515	+	Silent	SNP	T	T	C	rs2223665	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RSPO4	343637	bcgsc.ca	37	20	944746	944746	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ADAM33	80332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	3652895	3652895	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ADAM33	80332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	3652900	3652900	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FRG1B	284802	bcgsc.ca	37	20	29626126	29626126	+	RNA	SNP	G	G	T	rs71237044	alternate_allele	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RBM39	9584	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	34300947	34300947	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SOGA1	140710	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	20	35422018	35422020	+	In_Frame_Del	DEL	GTT	GTT	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	GTT	GTT	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TGM2	7052	broad.mit.edu;bcgsc.ca	37	20	36760743	36760743	+	Missense_Mutation	SNP	C	C	T	rs150712844		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
MAFB	9935	hgsc.bcm.edu	37	20	39317483	39317483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
DNTTIP1	116092	hgsc.bcm.edu	37	20	44420682	44420682	+	Silent	SNP	T	T	C	rs2664591	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZMYND8	23613	ucsc.edu	37	20	45867852	45867852	+	Missense_Mutation	SNP	A	A	G	rs2275801	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZBP1	81030	broad.mit.edu	37	20	56188152	56188152	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LZTR1	8216	broad.mit.edu	37	22	21343966	21344002	+	In_Frame_Del	DEL	GAGGAGGTGAGGGGCGTGGGGAGCCAGGGCGCAGGTA	GAGGAGGTGAGGGGCGTGGGGAGCCAGGGCGCAGGTA	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
HIC2	23119	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	21800327	21800327	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CABIN1	23523	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	24487724	24487724	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SEZ6L	23544	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	26707835	26707835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NEFH	4744	ucsc.edu	37	22	29885594	29885594	+	Silent	SNP	A	A	T	rs79235463	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NEFH	4744	broad.mit.edu	37	22	29885599	29885604	+	In_Frame_Del	DEL	AGGAAG	AGGAAG	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TOM1	10043	ucsc.edu	37	22	35742925	35742925	+	Silent	SNP	T	T	G	rs743810	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CARD10	29775	hgsc.bcm.edu	37	22	37915145	37915145	+	Silent	SNP	C	C	T	rs79861380		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TRIOBP	11078	hgsc.bcm.edu	37	22	38122462	38122462	+	Missense_Mutation	SNP	A	A	G	rs739138	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CPNE9	151835	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	9754512	9754512	+	Splice_Site	SNP	C	C	T	rs190521882	by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PRRT3	285368	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	9991595	9991596	+	Frame_Shift_Del	DEL	TG	TG	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	TG	TG	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
STAB1	23166	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	52554031	52554031	+	Silent	SNP	C	C	T	rs145377358		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
DNAH12	201625	bcgsc.ca	37	3	57494915	57494915	+	Missense_Mutation	SNP	G	G	T	rs115576589	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PLXNA1	5361	hgsc.bcm.edu	37	3	126733053	126733053	+	Silent	SNP	C	C	T	rs11719489	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
VWA5B2	90113	hgsc.bcm.edu	37	3	183959508	183959508	+	Silent	SNP	A	A	C	rs28606531	byfrequency;by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
IDUA	3425	broad.mit.edu	37	4	996204	996204	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PCDH7	5099	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	30726021	30726021	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
DTHD1	401124	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	36345151	36345151	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
POLR2B	5431	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	57889711	57889711	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ADH6	130	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	100131302	100131302	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SLC39A8	64116	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	103180638	103180638	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
DCHS2	54798	broad.mit.edu	37	4	155412464	155412464	+	Missense_Mutation	SNP	C	C	T	rs13149269	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
DNAH5	1767	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	13792259	13792259	+	Silent	SNP	T	T	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RAI14	26064	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	34823555	34823555	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ADAMTS19	171019	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	128977578	128977578	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SOWAHA	134548	hgsc.bcm.edu	37	5	132149684	132149684	+	Missense_Mutation	SNP	G	G	C	rs40274	bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
GEMIN5	25929	bcgsc.ca	37	5	154299581	154299581	+	Silent	SNP	A	A	G	rs61758976	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PPP1R3G	648791	hgsc.bcm.edu	37	6	5086070	5086070	+	Silent	SNP	A	A	G	rs667752		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RREB1	6239	hgsc.bcm.edu	37	6	7230680	7230680	+	Missense_Mutation	SNP	G	G	T	rs9502564	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
MAK	4117	broad.mit.edu	37	6	10796402	10796402	+	Silent	SNP	C	C	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KIF13A	63971	bcgsc.ca	37	6	17987327	17987327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
HIST1H1A	3024	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	26017333	26017333	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NKAPL	222698	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	28227192	28227192	+	Missense_Mutation	SNP	G	G	A	rs144318583	alternate_allele	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
C6orf136	221545	hgsc.bcm.edu	37	6	30615205	30615205	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KCNK17	89822	hgsc.bcm.edu	37	6	39282036	39282036	+	Missense_Mutation	SNP	T	T	C	rs10947804	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TIAM2	26230	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	155503406	155503406	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SP8	221833	hgsc.bcm.edu;broad.mit.edu	37	7	20824941	20824943	+	In_Frame_Del	DEL	GCC	GCC	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	GCC	GCC	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
GPNMB	10457	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	23313809	23313809	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
GARS	2617	hgsc.bcm.edu	37	7	30634661	30634661	+	Missense_Mutation	SNP	C	C	G	rs1049402	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CDC14C	168448	ucsc.edu	37	7	48965435	48965435	+	RNA	SNP	C	C	T	rs71547902	bycluster	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FZD9	8326	hgsc.bcm.edu	37	7	72848664	72848664	+	Silent	SNP	C	C	T	rs142125301	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
DBF4	10926	broad.mit.edu;bcgsc.ca	37	7	87529633	87529633	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PODXL	5420	hgsc.bcm.edu	37	7	131241030	131241035	+	In_Frame_Del	DEL	GGCGAC	GGCGAC	-	rs11277659	alternate_allele	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	GGCGAC	GGCGAC	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZNF775	285971	hgsc.bcm.edu	37	7	150094851	150094851	+	Missense_Mutation	SNP	A	A	G	rs13225910		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
MLL3	58508	broad.mit.edu	37	7	151843708	151843709	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SLC20A2	6575	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	42317494	42317494	+	Missense_Mutation	SNP	T	T	C	rs142888552	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
MAL2	114569	hgsc.bcm.edu	37	8	120220776	120220776	+	Splice_Site	DEL	G	G	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
POU5F1B	5462	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	128428589	128428589	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZNF696	79943	hgsc.bcm.edu	37	8	144378868	144378868	+	Silent	SNP	A	A	G	rs7386259	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PLEC	5339	hgsc.bcm.edu	37	8	145001588	145001588	+	Missense_Mutation	SNP	C	C	T	rs11136334	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KIAA1432	57589	broad.mit.edu	37	9	5765734	5765734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ERMP1	79956	hgsc.bcm.edu	37	9	5832728	5832728	+	Silent	SNP	G	G	C	rs1131727	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ANKRD18B	441459	bcgsc.ca	37	9	33566234	33566234	+	Silent	SNP	C	C	T	rs79153255		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
HDHD3	81932	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	116135916	116135916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CACNA1B	774	hgsc.bcm.edu	37	9	140917779	140917779	+	Missense_Mutation	SNP	G	G	T	rs7873074	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TUBBP5	643224	bcgsc.ca	37	9	141069885	141069885	+	RNA	SNP	A	A	C	rs62581043	byfrequency	TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TUBBP5	643224	broad.mit.edu	37	9	141070111	141070111	+	RNA	SNP	T	T	C	rs139643347		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RNR2	6053	broad.mit.edu;bcgsc.ca	37	MT	2553	2553	+	RNA	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
RNR2	6053	broad.mit.edu;bcgsc.ca	37	MT	2702	2702	+	RNA	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ND6	0	broad.mit.edu	37	MT	14212	14212	+	Silent	SNP	T	T	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SAT1	6303	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	23803894	23803894	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
ZDHHC15	158866	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	74649034	74649034	+	Splice_Site	SNP	C	C	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
LOC643486	0	bcgsc.ca	37	X	95592695	95592695	+	RNA	DEL	G	G	-	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
CENPI	2491	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	100400095	100400095	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TAF7L	54457	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	100542523	100542523	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NRK	203447	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	105142618	105142618	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
SAGE1	55511	broad.mit.edu;ucsc.edu	37	X	134994108	134994108	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
MIR202	574448	broad.mit.edu	37	10	135060489	135060490	+	RNA	INS	-	-	TG	rs34602863		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KRTAP10-6	386674	broad.mit.edu	37	21	46012219	46012220	+	In_Frame_Ins	INS	-	-	GGGGCGCAGCAGCTG	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
NEFH	4744	broad.mit.edu	37	22	29885622	29885623	+	In_Frame_Ins	INS	-	-	AGGAAG	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
PANX2	56666	broad.mit.edu	37	22	50617594	50617595	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
FZD1	8321	hgsc.bcm.edu	37	7	90894459	90894460	+	In_Frame_Ins	INS	-	-	CCG	rs139480179		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	-	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
TUBAL3	79861	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	5436106	5436107	+	Missense_Mutation	DNP	CC	CC	AA	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	CC	CC	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
KRTAP4-7	100132476	hgsc.bcm.edu	37	17	39240804	39240805	+	Missense_Mutation	DNP	CG	CG	AT	novel		TCGA-OR-A5KP-01A-11D-A30A-10	TCGA-OR-A5KP-10A-01D-A30A-10	CG	CG	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	f7581f1a-8a04-483a-a296-93bb72f8770d	c7c571ba-879c-4164-a608-bdbeeec0b9ee	0	0	0	0	0
