Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AADAC	0	genome.wustl.edu	37	3	151545656	151545656	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	3	151545656	151545656	A	G	SNP	AADAC	ENST00000232892	human	ensembl	69_37n	+1	known	missense	c.896	p.N299S	0.000	pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pfam_CarbesteraseB,pirsf_Arylacetamide_deacetylase	-	no_errors	AADAC	HGNC	ENSG00000114771	153	0	0.00	149	35	19.02	-	-	-
ABCG1	0	genome.wustl.edu	37	21	43645875	43645875	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	21	43645875	43645875	C	T	SNP	ABCG1	ENST00000361802	human	ensembl	69_37n	+1	known	missense	c.137	p.T46M	0.946	NULL	pfam_ABC_2_trans,pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Pigment_permease	-	no_errors	ABCG1	HGNC	ENSG00000160179	74	0	0.00	36	6	14.29	-	-	-
ADAM29	0	genome.wustl.edu	37	4	175896776	175896776	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	4	175896776	175896776	G	T	SNP	ADAM29	ENST00000359240	human	ensembl	69_37n	+1	known	missense	c.100	p.V34L	0.994	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM29	HGNC	ENSG00000168594	88	0	0.00	60	44	42.31	-	-	-
AMDHD1	0	genome.wustl.edu	37	12	96360235	96360235	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	12	96360235	96360235	G	C	SNP	AMDHD1	ENST00000266736	human	ensembl	69_37n	+1	known	missense	c.1142	p.G381A	1.000	pfam_Amidohydro_1,pfam_Amidohydro_3,superfamily_Metal-dep_hydrolase_composite,tigrfam_HutI	pfam_Amidohydro_1,pfam_Amidohydro_3,superfamily_Metal-dep_hydrolase_composite,tigrfam_HutI	-	no_errors	AMDHD1	HGNC	ENSG00000139344	138	0	0.00	157	24	13.19	-	-	-
CHSY3	0	genome.wustl.edu	37	5	129243980	129243980	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	5	129243980	129243980	C	A	SNP	CHSY3	ENST00000305031	human	ensembl	69_37n	+1	known	missense	c.1013	p.T338K	1.000	pfam_Chond_GalNAc,pfam_Fringe-like	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY3	HGNC	ENSG00000198108	43	0	0.00	40	18	31.03	-	-	-
CNTN1	0	genome.wustl.edu	37	12	41352942	41352942	+	Silent	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	12	41352942	41352942	C	T	SNP	CNTN1	ENST00000347616	human	ensembl	69_37n	+1	known	silent	c.1710	p.I570	0.993	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CNTN1	HGNC	ENSG00000018236	136	0	0.00	210	30	12.50	-	-	-
CTSA	0	genome.wustl.edu	37	20	44521044	44521044	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	20	44521044	44521044	A	T	SNP	CTSA	ENST00000372484	human	ensembl	69_37n	+1	known	missense	c.419	p.N140I	0.987	pfam_Peptidase_S10,prints_Peptidase_S10	pfam_Peptidase_S10,prints_Peptidase_S10	-	no_errors	CTSA	HGNC	ENSG00000064601	91	0	0.00	69	9	11.54	-	-	-
DCAF12L1	0	genome.wustl.edu	37	X	125685532	125685532	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	X	125685532	125685532	G	A	SNP	DCAF12L1	ENST00000371126	human	ensembl	69_37n	-1	known	missense	c.1060	p.R354W	0.945	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889	35	0	0.00	36	18	33.33	-	-	-
DCT	0	genome.wustl.edu	37	13	95118847	95118847	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	13	95118847	95118847	G	A	SNP	DCT	ENST00000446125	human	ensembl	69_37n	-1	known	missense	c.661	p.R221W	0.992	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	DCT	HGNC	ENSG00000080166	156	0	0.00	72	23	24.21	-	-	-
DMRT3	0	genome.wustl.edu	37	9	990144	990144	+	Missense_Mutation	SNP	T	T	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	9	990144	990144	T	A	SNP	DMRT3	ENST00000190165	human	ensembl	69_37n	+1	known	missense	c.558	p.S186R	0.862	NULL	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRT3	HGNC	ENSG00000064218	68	0	0.00	35	15	30.00	-	-	-
DOCK7	0	genome.wustl.edu	37	1	63084424	63084424	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	1	63084424	63084424	G	C	SNP	DOCK7	ENST00000251157	human	ensembl	69_37n	-1	known	missense	c.1635	p.I545M	1.000	NULL	pfam_DOCK,pfam_DUF3398,superfamily_ARM-type_fold	-	no_errors	DOCK7	HGNC	ENSG00000116641	149	0	0.00	101	68	40.24	-	-	-
EIF2B3	0	genome.wustl.edu	37	1	45363093	45363093	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	1	45363093	45363093	G	A	SNP	EIF2B3	ENST00000360403	human	ensembl	69_37n	-1	known	missense	c.590	p.T197M	1.000	NULL	pfam_NTP_transferase	-	no_errors	EIF2B3	HGNC	ENSG00000070785	52	0	0.00	38	9	18.75	-	-	-
FAM149A	0	genome.wustl.edu	37	4	187074851	187074851	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	4	187074851	187074851	C	A	SNP	FAM149A	ENST00000356371	human	ensembl	69_37n	+1	known	missense	c.1012	p.Q338K	0.993	pfam_DUF3719	pfam_DUF3719	-	no_errors	FAM149A	HGNC	ENSG00000109794	212	0	0.00	127	23	15.33	-	-	-
FMNL2	0	genome.wustl.edu	37	2	153504368	153504368	+	Silent	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	2	153504368	153504368	C	T	SNP	FMNL2	ENST00000288670	human	ensembl	69_37n	+1	known	silent	c.3228	p.R1076	1.000	NULL	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,superfamily_FH2_actin-bd,superfamily_ARM-type_fold,smart_Actin-bd_FH2/DRF_autoreg,prints_Wilms_tumour	-	no_errors	FMNL2	HGNC	ENSG00000157827	210	0	0.00	118	21	15.00	-	-	-
FOXA1	0	genome.wustl.edu	37	14	38061410	38061410	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	14	38061410	38061410	C	-	DEL	FOXA1	ENST00000250448	human	ensembl	69_37n	-1	known	frame_shift_del	c.579	p.S194fs	0.998	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,pfam_Fork-head_N,pfam_Forkhead_box_C,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXA1	HGNC	ENSG00000129514	31	0	0.00	12	6	33.33	-	-	-
GBP4	0	genome.wustl.edu	37	1	89651075	89651075	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	1	89651075	89651075	T	G	SNP	GBP4	ENST00000355754	human	ensembl	69_37n	-1	known	missense	c.1785	p.E595D	0.000	superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C	-	no_errors	GBP4	HGNC	ENSG00000162654	229	0	0.00	153	35	18.62	-	-	-
GRIK1	0	genome.wustl.edu	37	21	31023551	31023551	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	21	31023551	31023551	G	A	SNP	GRIK1	ENST00000535441	human	ensembl	69_37n	-1	known	missense	c.841	p.R281W	1.000	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK1	HGNC	ENSG00000171189	68	0	0.00	35	8	18.60	-	-	-
HEG1	0	genome.wustl.edu	37	3	124746052	124746052	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	3	124746052	124746052	A	G	SNP	HEG1	ENST00000311127	human	ensembl	69_37n	-1	known	missense	c.910	p.S304P	0.000	NULL	pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	-	no_errors	HEG1	HGNC	ENSG00000173706	69	0	0.00	24	36	60.00	-	-	-
IGSF1	0	genome.wustl.edu	37	X	130409529	130409529	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	X	130409529	130409529	T	C	SNP	IGSF1	ENST00000370903	human	ensembl	69_37n	-1	known	missense	c.3122	p.Y1041C	1.000	smart_Ig_sub,smart_Ig_sub2	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	IGSF1	HGNC	ENSG00000147255	345	0	0.00	227	43	15.87	-	-	-
IL10RA	0	genome.wustl.edu	37	11	117864082	117864082	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	11	117864082	117864082	G	A	SNP	IL10RA	ENST00000227752	human	ensembl	69_37n	+1	known	missense	c.494	p.R165Q	0.978	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3	-	no_errors	IL10RA	HGNC	ENSG00000110324	52	0	0.00	17	19	52.78	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56160679	56160680	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	5	56160679	56160680	-	A	INS	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.953_954	p.L319fs	0.965:0.937	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	99	0	0.00	55	48	46.60	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56181765	56181765	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	5	56181765	56181765	C	G	SNP	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	missense	c.3989	p.S1330W	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	136	0	0.00	101	48	32.21	-	-	-
MARC1	0	genome.wustl.edu	37	1	220986672	220986672	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	1	220986672	220986672	G	A	SNP	MARC1	ENST00000407981	human	ensembl	69_37n	+1	putative	nonsense	c.702	p.W234*	0.433	pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	pfam_MoCF_Sase_C,pfam_MOSC_N,superfamily_Pyrv_Knase-like_insert_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	MARC1	HGNC	ENSG00000186205	257	0	0.00	148	49	24.87	-	-	-
MUC16	0	genome.wustl.edu	37	19	9066848	9066848	+	Silent	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	19	9066848	9066848	C	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	silent	c.20598	p.E6866	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	447	1	0.22	296	108	26.73	-	-	-
OR4A5	0	genome.wustl.edu	37	11	51412164	51412164	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	11	51412164	51412164	T	G	SNP	OR4A5	ENST00000319760	human	ensembl	69_37n	-1	known	missense	c.232	p.K78Q	0.627	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4A5	HGNC	ENSG00000221840	200	1	0.50	278	57	16.96	-	-	-
PCDHA5	0	genome.wustl.edu	37	5	140201481	140201481	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	5	140201481	140201481	G	A	SNP	PCDHA5	ENST00000529859	human	ensembl	69_37n	+1	known	missense	c.121	p.G41R	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA5	HGNC	ENSG00000204965	39	0	0.00	37	7	15.91	-	-	-
PCDHB7	0	genome.wustl.edu	37	5	140554089	140554089	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	5	140554089	140554089	C	T	SNP	PCDHB7	ENST00000231137	human	ensembl	69_37n	+1	known	missense	c.1673	p.S558L	0.993	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	70	0	0.00	64	12	15.79	-	-	-
PKHD1	0	genome.wustl.edu	37	6	51524257	51524257	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	6	51524257	51524257	C	T	SNP	PKHD1	ENST00000371117	human	ensembl	69_37n	-1	known	missense	c.10667	p.R3556H	0.001	NULL	pfam_IPT_TIG_rcpt,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT_TIG_rcpt,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	164	0	0.00	156	30	16.13	-	-	-
PRKG2	0	genome.wustl.edu	37	4	82056310	82056310	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	4	82056310	82056310	A	G	SNP	PRKG2	ENST00000264399	human	ensembl	69_37n	-1	known	missense	c.1775	p.L592S	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_cGMP-dependent_protein_kinase,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_cat_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC	ENSG00000138669	185	1	0.54	177	48	21.33	-	-	-
PTPN13	0	genome.wustl.edu	37	4	87607896	87607897	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	4	87607896	87607897	-	G	INS	PTPN13	ENST00000436978	human	ensembl	69_37n	+1	known	frame_shift_ins	c.328_329	p.A112fs	1.000:1.000	pirsf_Tyr_Pase_non-rcpt_typ-13,superfamily_PAZ,smart_KIND	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629	21	0	0.00	16	2	11.11	-	-	-
PTPRH	0	genome.wustl.edu	37	19	55693164	55693164	+	Silent	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	19	55693164	55693164	G	A	SNP	PTPRH	ENST00000376350	human	ensembl	69_37n	-1	known	silent	c.3306	p.Y1102	0.433	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRH	HGNC	ENSG00000080031	110	0	0.00	42	10	19.23	-	-	-
SIN3B	0	genome.wustl.edu	37	19	16976371	16976372	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	19	16976371	16976372	-	TT	INS	SIN3B	ENST00000379803	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1630_1631	p.Y545fs	0.991:1.000	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3B	HGNC	ENSG00000127511	24	0	0.00	11	5	31.25	-	-	-
SIPA1L3	0	genome.wustl.edu	37	19	38631959	38631959	+	Silent	SNP	A	A	G			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	19	38631959	38631959	A	G	SNP	SIPA1L3	ENST00000222345	human	ensembl	69_37n	+1	known	silent	c.3279	p.L1093	0.037	NULL	pfam_DUF3401,pfam_Rap_GAP,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP	-	no_errors	SIPA1L3	HGNC	ENSG00000105738	107	0	0.00	65	15	17.86	-	-	-
STRC	0	genome.wustl.edu	37	15	43893206	43893206	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	15	43893206	43893206	T	C	SNP	STRC	ENST00000450892	human	ensembl	69_37n	-1	known	missense	c.4708	p.I1570V	0.047	NULL	NULL	-	no_errors	STRC	HGNC	ENSG00000242866	123	0	0.00	50	12	19.35	-	-	-
TNFAIP3	0	genome.wustl.edu	37	6	138200082	138200082	+	Silent	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	6	138200082	138200082	C	T	SNP	TNFAIP3	ENST00000237289	human	ensembl	69_37n	+1	known	silent	c.1500	p.N500	0.044	pfam_Znf_A20,smart_Znf_A20,pfscan_Znf_A20	pfam_Znf_A20,pfam_OTU,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	TNFAIP3	HGNC	ENSG00000118503	54	0	0.00	35	9	20.45	-	-	-
UBR4	0	genome.wustl.edu	37	1	19504222	19504222	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	1	19504222	19504222	C	T	SNP	UBR4	ENST00000375267	human	ensembl	69_37n	-1	known	missense	c.2370	p.M790I	1.000	NULL	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	221	0	0.00	149	23	13.37	-	-	-
VPS13C	0	genome.wustl.edu	37	15	62161736	62161736	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	15	62161736	62161736	C	T	SNP	VPS13C	ENST00000261517	human	ensembl	69_37n	-1	known	missense	c.10711	p.V3571I	0.996	pfam_Autophagy-rel_C	pfam_VPSAP,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	184	0	0.00	225	54	19.35	-	-	-
ZBTB22	0	genome.wustl.edu	37	6	33284663	33284663	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	6	33284663	33284663	C	-	DEL	ZBTB22	ENST00000418724	human	ensembl	69_37n	-1	known	frame_shift_del	c.31	p.A11fs	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB22	HGNC	ENSG00000236104	25	0	0.00	11	6	33.33	-	-	-
ZNF559	0	genome.wustl.edu	37	19	9453596	9453596	+	Missense_Mutation	SNP	A	A	C			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	19	9453596	9453596	A	C	SNP	ZNF559	ENST00000393883	human	ensembl	69_37n	+1	known	missense	c.1469	p.E490A	0.006	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF559	HGNC	ENSG00000188321	168	0	0.00	150	57	27.54	-	-	-
ZNF592	0	genome.wustl.edu	37	15	85345429	85345429	+	Silent	SNP	G	G	A			TCGA-A2-A0EU-01A-22W-A071-09	TCGA-A2-A0EU-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	de30da8f-903f-428e-a63d-59625fc858a9	1583a7c5-c835-44fa-918a-1448abf6533d	15	85345429	85345429	G	A	SNP	ZNF592	ENST00000299927	human	ensembl	69_37n	+1	known	silent	c.3609	p.E1203	0.253	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716	37	0	0.00	16	9	36.00	-	-	-
