Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AGPAT9	0	genome.wustl.edu	37	4	84516078	84516078	+	Silent	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	4	84516078	84516078	C	T	SNP	AGPAT9	ENST00000264409	human	ensembl	69_37n	+1	known	silent	c.819	p.R273	0.670	pfam_Acyltransferase,smart_Acyltransferase	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	AGPAT9	HGNC	ENSG00000138678	125	0	0.00	70	10	12.50	-	-	-
AKAP13	0	genome.wustl.edu	37	15	86286780	86286780	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	15	86286780	86286780	G	C	SNP	AKAP13	ENST00000361243	human	ensembl	69_37n	+1	known	missense	c.8128	p.E2710Q	0.999	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776	67	0	0.00	57	13	18.57	-	-	-
C11orf30	0	genome.wustl.edu	37	11	76239376	76239376	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	76239376	76239376	T	C	SNP	C11orf30	ENST00000334736	human	ensembl	69_37n	+1	known	missense	c.2060	p.L687P	1.000	NULL	pfam_ENT_N,pfscan_ENT_N	-	no_errors	C11orf30	HGNC	ENSG00000158636	29	0	0.00	41	7	14.58	-	-	-
C15orf39	0	genome.wustl.edu	37	15	75498684	75498684	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	15	75498684	75498684	G	T	SNP	C15orf39	ENST00000360639	human	ensembl	69_37n	+1	known	nonsense	c.295	p.E99*	0.401	NULL	NULL	-	no_errors	C15orf39	HGNC	ENSG00000167173	54	0	0.00	47	8	14.55	-	-	-
C1orf167	0	genome.wustl.edu	37	1	11844330	11844330	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	1	11844330	11844330	C	T	SNP	C1orf167	ENST00000312793	human	ensembl	69_37n	+1	putative	missense	c.1255	p.R419C	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	C1orf167	HGNC	ENSG00000215910	35	0	0.00	30	5	14.29	-	-	-
C6orf183	0	genome.wustl.edu	37	6	109591433	109591433	+	Silent	SNP	T	T	C			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	6	109591433	109591433	T	C	SNP	C6orf183	ENST00000534901	human	ensembl	69_37n	+1	known	silent	c.1638	p.N546	0.000	NULL	NULL	-	no_errors	C6orf183	HGNC	ENSG00000243587	25	0	0.00	24	4	14.29	-	-	-
CASZ1	0	genome.wustl.edu	37	1	10713493	10713493	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	1	10713493	10713493	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	69_37n	-1	known	missense	c.2621	p.S874L	0.998	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	198	0	0.00	138	22	13.75	-	-	-
CHM	0	genome.wustl.edu	37	X	85302527	85302527	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	X	85302527	85302527	T	C	SNP	CHM	ENST00000357749	human	ensembl	69_37n	-1	known	missense	c.10	p.T4A	0.982	pirsf_Rab_geranylTrfase_A_euk	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort,prints_GDP_dissociation_inhibitor	-	no_errors	CHM	HGNC	ENSG00000188419	64	0	0.00	38	6	13.04	-	-	-
CHST1	0	genome.wustl.edu	37	11	45671968	45671968	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	45671968	45671968	G	A	SNP	CHST1	ENST00000308064	human	ensembl	69_37n	-1	known	missense	c.506	p.P169L	0.002	pfam_Sulfotransferase_dom,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST1	HGNC	ENSG00000175264	58	0	0.00	35	5	12.50	-	-	-
CIZ1	0	genome.wustl.edu	37	9	130940822	130940822	+	RNA	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	9	130940822	130940822	C	T	SNP	CIZ1	ENST00000475471	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	CIZ1	HGNC	ENSG00000148337	28	0	0.00	20	4	16.67	-	-	-
CNDP1	0	genome.wustl.edu	37	18	72223592	72223594	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	18	72223592	72223594	TGC	-	DEL	CNDP1	ENST00000358821	human	ensembl	69_37n	+1	known	in_frame_del	c.44_46	p.L19in_frame_del	0.574:0.612:0.628	NULL	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP1	HGNC	ENSG00000150656	72	0	0.00	36	4	10.00	-	-	-
COL6A5	0	genome.wustl.edu	37	3	130190630	130190630	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	3	130190630	130190630	G	A	SNP	COL6A5	ENST00000265379	human	ensembl	69_37n	+1	known	missense	c.7679	p.S2560N	0.000	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	57	0	0.00	37	5	11.90	-	-	-
CPT1B	0	genome.wustl.edu	37	22	51015382	51015382	+	Silent	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	22	51015382	51015382	G	A	SNP	CPT1B	ENST00000312108	human	ensembl	69_37n	-1	known	silent	c.363	p.I121	1.000	NULL	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	62	0	0.00	31	6	16.22	-	-	-
CRIP1	0	genome.wustl.edu	37	14	105953599	105953599	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	14	105953599	105953599	G	T	SNP	CRIP1	ENST00000330233	human	ensembl	69_37n	+1	known	missense	c.3	p.M1I	1.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	CRIP1	HGNC	ENSG00000213145	25	0	0.00	19	4	17.39	-	-	-
CUL7	0	genome.wustl.edu	37	6	43010839	43010839	+	Silent	SNP	G	G	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	6	43010839	43010839	G	T	SNP	CUL7	ENST00000535468	human	ensembl	69_37n	-1	known	silent	c.3687	p.R1229	1.000	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090	38	0	0.00	36	4	10.00	-	-	-
DALRD3	0	genome.wustl.edu	37	3	49055154	49055154	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	3	49055154	49055154	C	A	SNP	DALRD3	ENST00000341949	human	ensembl	69_37n	-1	known	missense	c.610	p.D204Y	0.000	NULL	pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,smart_DALR_anticod-bd	-	no_errors	DALRD3	HGNC	ENSG00000178149	114	0	0.00	108	17	13.60	-	-	-
DCAF4L2	0	genome.wustl.edu	37	8	88885923	88885923	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	8	88885923	88885923	C	A	SNP	DCAF4L2	ENST00000319675	human	ensembl	69_37n	-1	known	nonsense	c.277	p.E93*	0.055	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L2	HGNC	ENSG00000176566	131	0	0.00	160	34	17.35	-	-	-
DPP7	0	genome.wustl.edu	37	9	140006171	140006171	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	9	140006171	140006171	C	T	SNP	DPP7	ENST00000371579	human	ensembl	69_37n	-1	known	missense	c.1243	p.G415R	0.978	pfam_Peptidase_S28	pfam_Peptidase_S28,pfam_AB_hydrolase_1	-	no_errors	DPP7	HGNC	ENSG00000176978	103	0	0.00	45	9	16.67	-	-	-
FLJ35816	0	genome.wustl.edu	37	4	1147333	1147333	+	RNA	SNP	C	C	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	4	1147333	1147333	C	A	SNP	FLJ35816	ENST00000417557	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC092535.3	Clone_based_vega_gene	ENSG00000227189	110	1	0.90	77	10	11.49	-	-	-
FOLH1	0	genome.wustl.edu	37	11	49204779	49204779	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	49204779	49204779	C	T	SNP	FOLH1	ENST00000256999	human	ensembl	69_37n	-1	known	missense	c.842	p.R281H	0.843	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	48	0	0.00	33	7	17.50	-	-	-
FOLH1	0	genome.wustl.edu	37	11	49204790	49204790	+	Silent	SNP	A	A	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	49204790	49204790	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	69_37n	-1	known	silent	c.831	p.Y277	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	44	0	0.00	30	9	23.08	-	-	-
GNAT1	0	genome.wustl.edu	37	3	50231619	50231619	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	3	50231619	50231619	G	A	SNP	GNAT1	ENST00000232461	human	ensembl	69_37n	+1	known	missense	c.673	p.A225T	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAT1	HGNC	ENSG00000114349	90	0	0.00	58	13	18.31	-	-	-
HAUS3	0	genome.wustl.edu	37	4	2240617	2240617	+	Missense_Mutation	SNP	C	C	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	4	2240617	2240617	C	G	SNP	HAUS3	ENST00000243706	human	ensembl	69_37n	-1	known	missense	c.1063	p.D355H	1.000	NULL	NULL	-	no_errors	HAUS3	HGNC	ENSG00000214367	52	0	0.00	39	8	17.02	-	-	-
HEATR5A	0	genome.wustl.edu	37	14	31858209	31858209	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	14	31858209	31858209	C	T	SNP	HEATR5A	ENST00000389961	human	ensembl	69_37n	-1	known	missense	c.757	p.A253T	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493	68	0	0.00	43	5	10.42	-	-	-
HUWE1	0	genome.wustl.edu	37	X	53561637	53561637	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	X	53561637	53561637	G	A	SNP	HUWE1	ENST00000262854	human	ensembl	69_37n	-1	known	missense	c.12671	p.A4224V	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/transl_elong_EF1B_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	43	0	0.00	25	6	19.35	-	-	-
IMMP2L	0	genome.wustl.edu	37	7	110303527	110303527	+	RNA	SNP	T	T	C			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	7	110303527	110303527	T	C	SNP	IMMP2L	ENST00000489381	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IMMP2L	HGNC	ENSG00000184903	23	0	0.00	7	3	30.00	-	-	-
ITGB4	0	genome.wustl.edu	37	17	73753041	73753041	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	17	73753041	73753041	C	T	SNP	ITGB4	ENST00000200181	human	ensembl	69_37n	+1	known	missense	c.5071	p.R1691W	1.000	pirsf_Integrin_bsu-4,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,pfscan_Fibronectin_type3,prints_Integrin_bsu	-	no_errors	ITGB4	HGNC	ENSG00000132470	47	0	0.00	48	8	14.29	-	-	-
ITIH1	0	genome.wustl.edu	37	3	52814347	52814347	+	Silent	SNP	G	G	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	3	52814347	52814347	G	T	SNP	ITIH1	ENST00000273283	human	ensembl	69_37n	+1	known	silent	c.636	p.L212	0.678	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,superfamily_PsdUridine_synth_cat_dom,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH1	HGNC	ENSG00000055957	47	0	0.00	36	4	10.00	-	-	-
L3MBTL1	0	genome.wustl.edu	37	20	42143191	42143191	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	20	42143191	42143191	C	T	SNP	L3MBTL1	ENST00000373135	human	ensembl	69_37n	+1	known	nonsense	c.7	p.R3*	0.001	NULL	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513	122	0	0.00	97	16	14.04	-	-	-
LINC00469	0	genome.wustl.edu	37	17	71746427	71746427	+	RNA	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	17	71746427	71746427	G	A	SNP	LINC00469	ENST00000444747	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	LINC00469	HGNC	ENSG00000177338	26	0	0.00	23	5	17.86	-	-	-
LRFN2	0	genome.wustl.edu	37	6	40399625	40399625	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	6	40399625	40399625	C	T	SNP	LRFN2	ENST00000338305	human	ensembl	69_37n	-1	known	missense	c.1228	p.G410R	0.916	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	LRFN2	HGNC	ENSG00000156564	51	0	0.00	70	8	10.26	-	-	-
LRFN2	0	genome.wustl.edu	37	6	40400198	40400198	+	Missense_Mutation	SNP	C	C	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	6	40400198	40400198	C	A	SNP	LRFN2	ENST00000338305	human	ensembl	69_37n	-1	known	missense	c.655	p.A219S	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	LRFN2	HGNC	ENSG00000156564	84	0	0.00	74	20	21.28	-	-	-
LRRC72	0	genome.wustl.edu	37	7	16606022	16606022	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	7	16606022	16606022	G	A	SNP	LRRC72	ENST00000401542	human	ensembl	69_37n	+1	novel	missense	c.512	p.R171Q	0.675	NULL	NULL	-	no_errors	LRRC72	HGNC	ENSG00000205858	60	0	0.00	35	5	12.50	-	-	-
MAST4	0	genome.wustl.edu	37	5	66088133	66088133	+	RNA	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	5	66088133	66088133	C	T	SNP	MAST4	ENST00000451144	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	MAST4	HGNC	ENSG00000069020	155	0	0.00	107	17	13.60	-	-	-
MYBL2	0	genome.wustl.edu	37	20	42340188	42340188	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	20	42340188	42340188	G	A	SNP	MYBL2	ENST00000217026	human	ensembl	69_37n	+1	known	missense	c.1666	p.E556K	1.000	pfam_C-myb_C	pfam_C-myb_C,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL2	HGNC	ENSG00000101057	45	0	0.00	49	7	12.50	-	-	-
MYO7A	0	genome.wustl.edu	37	11	76872063	76872063	+	Silent	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	76872063	76872063	C	T	SNP	MYO7A	ENST00000409709	human	ensembl	69_37n	+1	known	silent	c.1245	p.N415	0.042	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474	128	0	0.00	101	13	11.40	-	-	-
NAMPT	0	genome.wustl.edu	37	7	105913026	105913026	+	Missense_Mutation	SNP	T	T	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	7	105913026	105913026	T	G	SNP	NAMPT	ENST00000222553	human	ensembl	69_37n	-1	known	missense	c.397	p.T133P	1.000	pirsf_Nicotinamide_PRibTrfase	pfam_Nic_PRibTrfase-like,superfamily_Quinolinate_PRibosylTrfase_C,pirsf_Nicotinamide_PRibTrfase	-	no_errors	NAMPT	HGNC	ENSG00000105835	87	0	0.00	49	7	12.50	-	-	-
NBPF1	0	genome.wustl.edu	37	1	16889890	16889891	+	RNA	DEL	TG	TG	-			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	1	16889890	16889891	TG	-	DEL	NBPF1	ENST00000392963	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	NBPF1	HGNC	ENSG00000219481	11	0	0.00	4	2	33.33	-	-	-
NIPSNAP1	0	genome.wustl.edu	37	22	29951936	29951936	+	Silent	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	22	29951936	29951936	C	T	SNP	NIPSNAP1	ENST00000216121	human	ensembl	69_37n	-1	known	silent	c.843	p.S281	0.068	pfam_NIPSNAP,superfamily_Dimeric_a/b-barrel	pfam_NIPSNAP,superfamily_Dimeric_a/b-barrel	-	no_errors	NIPSNAP1	HGNC	ENSG00000184117	38	0	0.00	22	6	21.43	-	-	-
NLRP13	0	genome.wustl.edu	37	19	56424072	56424072	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	19	56424072	56424072	G	T	SNP	NLRP13	ENST00000342929	human	ensembl	69_37n	-1	known	missense	c.1111	p.L371I	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP13	HGNC	ENSG00000173572	47	0	0.00	35	9	20.45	-	-	-
NOP56	0	genome.wustl.edu	37	20	2633420	2633421	+	RNA	INS	-	-	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	20	2633420	2633421	-	G	INS	NOP56	ENST00000469588	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.003:0.000	-	-	-	no_errors	NOP56	HGNC	ENSG00000101361	11	0	0.00	2	5	71.43	-	-	-
OR5M11	0	genome.wustl.edu	37	11	56310545	56310545	+	Silent	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	56310545	56310545	G	A	SNP	OR5M11	ENST00000528616	human	ensembl	69_37n	-1	known	silent	c.189	p.L63	0.998	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5M11	HGNC	ENSG00000255223	58	0	0.00	85	13	13.27	-	-	-
OR5T2	0	genome.wustl.edu	37	11	56000263	56000263	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	56000263	56000263	G	T	SNP	OR5T2	ENST00000313264	human	ensembl	69_37n	-1	known	missense	c.399	p.F133L	0.000	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR5T2	HGNC	ENSG00000181718	65	0	0.00	58	24	29.27	-	-	-
PAQR8	0	genome.wustl.edu	37	6	52268978	52268978	+	Missense_Mutation	SNP	G	G	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	6	52268978	52268978	G	T	SNP	PAQR8	ENST00000360726	human	ensembl	69_37n	+1	known	missense	c.967	p.A323S	0.998	NULL	pfam_HlyIII-related,superfamily_C-type_lectin_fold	-	no_errors	PAQR8	HGNC	ENSG00000170915	33	0	0.00	47	7	12.96	-	-	-
PPP1R1A	0	genome.wustl.edu	37	12	54969998	54969998	+	RNA	SNP	A	A	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	12	54969998	54969998	A	G	SNP	PPP1R1A	ENST00000547431	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PPP1R1A	HGNC	ENSG00000135447	9	0	0.00	5	10	66.67	-	-	-
PRIC285	0	genome.wustl.edu	37	20	62191954	62191954	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	20	62191954	62191954	C	T	SNP	PRIC285	ENST00000467148	human	ensembl	69_37n	-1	known	missense	c.7378	p.A2460T	0.000	NULL	pfam_RNase_II/R,smart_RNase_II/R	-	no_errors	RP4-697K14.7	Clone_based_vega_gene	ENSG00000130589	56	0	0.00	45	8	15.09	-	-	-
RASA3	0	genome.wustl.edu	37	13	114786882	114786882	+	Silent	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	13	114786882	114786882	C	T	SNP	RASA3	ENST00000334062	human	ensembl	69_37n	-1	known	silent	c.783	p.A261	0.960	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_RasGAP,pfam_C2_Ca-dep,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,prints_Znf_Btk_motif,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASA3	HGNC	ENSG00000185989	54	0	0.00	42	10	19.23	-	-	-
SLC28A2	0	genome.wustl.edu	37	15	45557310	45557310	+	Silent	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	15	45557310	45557310	C	T	SNP	SLC28A2	ENST00000347644	human	ensembl	69_37n	+1	known	silent	c.726	p.A242	0.802	pfam_Nuclsd_transpt2,tigrfam_C_nuclsd_transpt_met_bac	pfam_Nucleos_tra2_C,pfam_Nuclsd_transpt2,pfam_Nucleoside_recog_Gate,tigrfam_C_nuclsd_transpt_met_bac	-	no_errors	SLC28A2	HGNC	ENSG00000137860	64	0	0.00	45	20	30.77	-	-	-
SPRED2	0	genome.wustl.edu	37	2	65561392	65561392	+	Silent	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	2	65561392	65561392	C	T	SNP	SPRED2	ENST00000426832	human	ensembl	69_37n	-1	known	silent	c.258	p.E86	0.254	NULL	pfam_EVH1,pfscan_EVH1	-	no_start_codon	SPRED2	HGNC	ENSG00000198369	38	0	0.00	25	4	13.79	-	-	-
SPTAN1	0	genome.wustl.edu	37	9	131394575	131394575	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	9	131394575	131394575	A	G	SNP	SPTAN1	ENST00000358161	human	ensembl	69_37n	+1	known	missense	c.6932	p.H2311R	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF-hand,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_Ca-bd,prints_Spectrin_alpha_SH3,prints_SH3_domain,pfscan_EF_HAND_2,pfscan_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694	43	0	0.00	32	8	20.00	-	-	-
SUDS3	0	genome.wustl.edu	37	12	118828801	118828801	+	Silent	SNP	A	A	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	12	118828801	118828801	A	G	SNP	SUDS3	ENST00000397564	human	ensembl	69_37n	+1	known	silent	c.345	p.T115	0.000	pfam_Sds3	pfam_Sds3	-	no_errors	SUDS3	HGNC	ENSG00000111707	50	0	0.00	27	5	15.62	-	-	-
TIMP3	0	genome.wustl.edu	37	22	33253339	33253339	+	Missense_Mutation	SNP	T	T	C			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	22	33253339	33253339	T	C	SNP	TIMP3	ENST00000266085	human	ensembl	69_37n	+1	known	missense	c.308	p.L103P	1.000	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP3	HGNC	ENSG00000100234	78	0	0.00	47	14	22.95	-	-	-
TP53	0	genome.wustl.edu	37	17	7578370	7578370	+	Splice_Site	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	17	7578370	7578370	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	splice_site	c.559+1	e4+1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	43	0	0.00	24	9	27.27	-	-	-
TTC17	0	genome.wustl.edu	37	11	43511840	43511840	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	43511840	43511840	A	G	SNP	TTC17	ENST00000039989	human	ensembl	69_37n	+1	known	missense	c.3082	p.K1028E	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC17	HGNC	ENSG00000052841	55	0	0.00	26	9	25.71	-	-	-
TTC40	0	genome.wustl.edu	37	10	134699401	134699401	+	Missense_Mutation	SNP	C	C	T			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	10	134699401	134699401	C	T	SNP	TTC40	ENST00000368582	human	ensembl	69_37n	-1	known	missense	c.3367	p.D1123N	0.769	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	29	0	0.00	28	5	15.15	-	-	-
TTLL4	0	genome.wustl.edu	37	2	219602492	219602492	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	2	219602492	219602492	G	-	DEL	TTLL4	ENST00000258398	human	ensembl	69_37n	+1	known	frame_shift_del	c.93	p.P32fs	0.000	NULL	pfam_Tub_tyr_ligase	-	no_errors	TTLL4	HGNC	ENSG00000135912	52	0	0.00	52	7	11.86	-	-	-
TUT1	0	genome.wustl.edu	37	11	62344705	62344705	+	Missense_Mutation	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	11	62344705	62344705	G	A	SNP	TUT1	ENST00000308436	human	ensembl	69_37n	-1	known	missense	c.1333	p.R445W	0.989	NULL	pfam_PAP_assoc,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TUT1	HGNC	ENSG00000149016	35	0	0.00	34	6	15.00	-	-	-
WHAMM	0	genome.wustl.edu	37	15	83491923	83491923	+	Missense_Mutation	SNP	G	G	C			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	15	83491923	83491923	G	C	SNP	WHAMM	ENST00000286760	human	ensembl	69_37n	+1	known	missense	c.1342	p.V448L	0.005	NULL	superfamily_tRNA-bd_arm,pfscan_WH2_dom	-	no_errors	WHAMM	HGNC	ENSG00000156232	106	0	0.00	75	11	12.79	-	-	-
ZFYVE20	0	genome.wustl.edu	37	3	15126258	15126258	+	Silent	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	3	15126258	15126258	G	A	SNP	ZFYVE20	ENST00000253699	human	ensembl	69_37n	-1	known	silent	c.582	p.I194	1.000	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	pfam_Rbsn,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Znf_C2H2	-	no_errors	ZFYVE20	HGNC	ENSG00000131381	35	0	0.00	23	7	23.33	-	-	-
ZNF747	0	genome.wustl.edu	37	16	30544048	30544048	+	Silent	SNP	G	G	A			TCGA-A2-A3XY-01A-11D-A23C-09	TCGA-A2-A3XY-10A-01D-A23C-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5978cf32-c471-4f15-879f-398acec6a866	7a45c59e-841d-4e59-8c8c-f071064f28fc	16	30544048	30544048	G	A	SNP	ZNF747	ENST00000535210	human	ensembl	69_37n	-1	known	silent	c.765	p.H255	0.982	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	152	0	0.00	105	17	13.93	-	-	-
