Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB11	0	genome.wustl.edu	37	2	169851868	169851868	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	169851868	169851868	C	T	SNP	ABCB11	ENST00000263817	human	ensembl	69_37n	-1	known	missense	c.602	p.R201K	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB11	HGNC	ENSG00000073734	44	0	0.00	37	17	31.48	-	-	-
ACBD5	0	genome.wustl.edu	37	10	27506953	27506953	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	10	27506953	27506953	T	A	SNP	ACBD5	ENST00000375888	human	ensembl	69_37n	-1	known	missense	c.812	p.E271V	0.013	pirsf_M-assoc_diazepam-bd-inh	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,pirsf_M-assoc_diazepam-bd-inh,prints_Acyl-CoA-binding_protein	-	no_errors	ACBD5	HGNC	ENSG00000107897	61	0	0.00	114	34	22.97	-	-	-
ACOT11	0	genome.wustl.edu	37	1	55074840	55074840	+	RNA	SNP	T	T	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	55074840	55074840	T	A	SNP	ACOT11	ENST00000481208	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ACOT11	HGNC	ENSG00000162390	23	0	0.00	29	4	12.12	-	-	-
ACTA1	0	genome.wustl.edu	37	1	229567561	229567561	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	229567561	229567561	G	A	SNP	ACTA1	ENST00000366684	human	ensembl	69_37n	-1	known	silent	c.897	p.N299	0.967	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTA1	HGNC	ENSG00000143632	52	0	0.00	108	27	20.00	-	-	-
AP2A2	0	genome.wustl.edu	37	11	972125	972125	+	Splice_Site	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	972125	972125	G	A	SNP	AP2A2	ENST00000529125	human	ensembl	69_37n	+1	novel	splice_site	c.342+1	e4+1	1.000	-	-	-	no_errors	AP2A2	HGNC	ENSG00000183020	155	0	0.00	172	49	21.97	-	-	-
ARSD	0	genome.wustl.edu	37	X	2825134	2825134	+	RNA	SNP	A	A	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	X	2825134	2825134	A	G	SNP	ARSD	ENST00000495294	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	ARSD	HGNC	ENSG00000006756	12	0	0.00	10	10	50.00	-	-	-
BAI1	0	genome.wustl.edu	37	8	143566039	143566039	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	8	143566039	143566039	T	A	SNP	BAI1	ENST00000323289	human	ensembl	69_37n	+1	known	missense	c.2222	p.L741Q	1.000	pfam_DUF3497	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	81	0	0.00	100	65	39.39	-	-	-
BHMT2	0	genome.wustl.edu	37	5	78384371	78384371	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	5	78384371	78384371	C	G	SNP	BHMT2	ENST00000255192	human	ensembl	69_37n	+1	known	missense	c.1066	p.P356A	1.000	superfamily_S_MeTrfase,pirsf_Betaine-hCys_S-MeTrfase_BHMT	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_Betaine-hCys_S-MeTrfase_BHMT,pfscan_S_MeTrfase	-	no_errors	BHMT2	HGNC	ENSG00000132840	36	0	0.00	19	15	44.12	-	-	-
C10orf85	0	genome.wustl.edu	37	10	122357994	122357994	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	10	122357994	122357994	G	T	SNP	C10orf85	ENST00000369071	human	ensembl	69_37n	+1	known	missense	c.172	p.A58S	0.017	NULL	NULL	-	no_errors	C10orf85	HGNC	ENSG00000177234	36	0	0.00	12	17	58.62	-	-	-
C11orf92	0	genome.wustl.edu	37	11	111169110	111169110	+	RNA	SNP	A	A	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	111169110	111169110	A	T	SNP	C11orf92	ENST00000526150	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	C11orf92	HGNC	ENSG00000196167	38	0	0.00	36	4	10.00	-	-	-
CCT3	0	genome.wustl.edu	37	1	156280797	156280797	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	156280797	156280797	G	T	SNP	CCT3	ENST00000295688	human	ensembl	69_37n	-1	known	missense	c.1345	p.R449S	0.999	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_gamma	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_gamma	-	no_errors	CCT3	HGNC	ENSG00000163468	42	0	0.00	55	13	19.12	-	-	-
CD274	0	genome.wustl.edu	37	9	5465705	5465705	+	RNA	SNP	G	G	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	9	5465705	5465705	G	T	SNP	CD274	ENST00000492923	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD274	HGNC	ENSG00000120217	14	0	0.00	16	5	23.81	-	-	-
CDK17	0	genome.wustl.edu	37	12	96679861	96679861	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	12	96679861	96679861	G	A	SNP	CDK17	ENST00000261211	human	ensembl	69_37n	-1	known	missense	c.1282	p.P428S	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK17	HGNC	ENSG00000059758	34	0	0.00	26	4	13.33	-	-	-
CEACAM4	0	genome.wustl.edu	37	19	42132011	42132011	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	19	42132011	42132011	C	T	SNP	CEACAM4	ENST00000221954	human	ensembl	69_37n	-1	known	missense	c.388	p.D130N	0.000	pfam_Ig_V-set,pfscan_Ig-like	pfam_Ig_V-set,pfscan_Ig-like	-	no_errors	CEACAM4	HGNC	ENSG00000105352	74	0	0.00	56	55	49.55	-	-	-
CELF1	0	genome.wustl.edu	37	11	47494725	47494725	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	47494725	47494725	G	A	SNP	CELF1	ENST00000532048	human	ensembl	69_37n	-1	known	silent	c.1326	p.D442	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF1	HGNC	ENSG00000149187	50	0	0.00	59	15	20.27	-	-	-
CHST2	0	genome.wustl.edu	37	3	142840236	142840236	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	142840236	142840236	T	C	SNP	CHST2	ENST00000309575	human	ensembl	69_37n	+1	known	missense	c.578	p.L193P	1.000	pfam_Sulfotransferase_dom,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST2	HGNC	ENSG00000175040	60	0	0.00	40	24	36.92	-	-	-
CIB4	0	genome.wustl.edu	37	2	26846282	26846282	+	Silent	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	26846282	26846282	T	C	SNP	CIB4	ENST00000405346	human	ensembl	69_37n	-1	putative	silent	c.192	p.K64	0.001	NULL	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CIB4	HGNC	ENSG00000157884	28	0	0.00	29	5	14.71	-	-	-
CMYA5	0	genome.wustl.edu	37	5	79095233	79095233	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	5	79095233	79095233	G	T	SNP	CMYA5	ENST00000446378	human	ensembl	69_37n	+1	known	missense	c.12004	p.V4002L	0.993	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,pfscan_B30.2/SPRY	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	62	0	0.00	68	29	29.90	-	-	-
CMYA5	0	genome.wustl.edu	37	5	79095234	79095234	+	Missense_Mutation	SNP	T	T	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	5	79095234	79095234	T	G	SNP	CMYA5	ENST00000446378	human	ensembl	69_37n	+1	known	missense	c.12005	p.V4002G	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,pfscan_B30.2/SPRY	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	62	0	0.00	68	28	29.17	-	-	-
CNTN4	0	genome.wustl.edu	37	3	3085388	3085388	+	Silent	SNP	A	A	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	3085388	3085388	A	G	SNP	CNTN4	ENST00000397461	human	ensembl	69_37n	+1	known	silent	c.2811	p.K937	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CNTN4	HGNC	ENSG00000144619	49	0	0.00	28	27	49.09	-	-	-
CWF19L1	0	genome.wustl.edu	37	10	101993082	101993082	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	10	101993082	101993082	C	T	SNP	CWF19L1	ENST00000354105	human	ensembl	69_37n	-1	known	missense	c.1519	p.D507N	1.000	pfam_Cwf19-like_C_dom-2	pfam_Cwf19-like_C_dom-1,pfam_Cwf19-like_C_dom-2,superfamily_HIT-like	-	no_errors	CWF19L1	HGNC	ENSG00000095485	56	0	0.00	37	43	53.75	-	-	-
CYP2U1	0	genome.wustl.edu	37	4	108866300	108866300	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	4	108866300	108866300	C	T	SNP	CYP2U1	ENST00000332884	human	ensembl	69_37n	+1	known	missense	c.665	p.S222F	0.997	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B,prints_Cyt_P450_E_grp-I_CYP2D-like	-	no_errors	CYP2U1	HGNC	ENSG00000155016	55	0	0.00	38	20	34.48	-	-	-
DPM1	0	genome.wustl.edu	37	20	49562449	49562449	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	20	49562449	49562449	T	C	SNP	DPM1	ENST00000371582	human	ensembl	69_37n	-1	known	missense	c.307	p.I103V	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2	-	no_errors	DPM1	HGNC	ENSG00000000419	20	0	0.00	15	49	76.56	-	-	-
DSCR4	0	genome.wustl.edu	37	21	39492422	39492422	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	21	39492422	39492422	C	G	SNP	DSCR4	ENST00000328264	human	ensembl	69_37n	-1	known	missense	c.209	p.G70A	0.000	NULL	NULL	-	no_errors	DSCR4	HGNC	ENSG00000184029	56	0	0.00	193	27	12.27	-	-	-
ECD	0	genome.wustl.edu	37	10	74914034	74914034	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	10	74914034	74914034	C	T	SNP	ECD	ENST00000430082	human	ensembl	69_37n	-1	known	missense	c.763	p.E255K	1.000	pfam_SGT1	pfam_SGT1	-	no_errors	ECD	HGNC	ENSG00000122882	59	0	0.00	90	14	13.46	-	-	-
EEF1A2	0	genome.wustl.edu	37	20	62121849	62121849	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	20	62121849	62121849	C	A	SNP	EEF1A2	ENST00000217182	human	ensembl	69_37n	-1	known	missense	c.1012	p.A338S	0.999	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C,tigrfam_Transl_elong_EF1A_euk/arc	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd,tigrfam_Transl_elong_EF1A_euk/arc	-	no_errors	EEF1A2	HGNC	ENSG00000101210	93	0	0.00	322	49	13.21	-	-	-
ELOVL4	0	genome.wustl.edu	37	6	80629179	80629179	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	6	80629179	80629179	C	A	SNP	ELOVL4	ENST00000369816	human	ensembl	69_37n	-1	known	missense	c.627	p.Q209H	1.000	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL4	HGNC	ENSG00000118402	34	0	0.00	45	12	21.05	-	-	-
EZH1	0	genome.wustl.edu	37	17	40855784	40855784	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	17	40855784	40855784	G	A	SNP	EZH1	ENST00000428826	human	ensembl	69_37n	-1	known	missense	c.2072	p.S691L	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH1	HGNC	ENSG00000108799	32	0	0.00	29	4	12.12	-	-	-
F5	0	genome.wustl.edu	37	1	169487737	169487737	+	Silent	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	169487737	169487737	C	A	SNP	F5	ENST00000367796	human	ensembl	69_37n	-1	known	silent	c.6273	p.S2091	0.066	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734	67	0	0.00	85	69	44.81	-	-	-
FCGBP	0	genome.wustl.edu	37	19	40421281	40421281	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	19	40421281	40421281	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	69_37n	-1	known	silent	c.2640	p.F880	0.052	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	88	0	0.00	88	84	48.84	-	-	-
FERMT3	0	genome.wustl.edu	37	11	63988103	63988103	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	63988103	63988103	G	A	SNP	FERMT3	ENST00000279227	human	ensembl	69_37n	+1	known	missense	c.1519	p.V507I	0.990	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain	pfam_FERM_central,pfam_Pleckstrin_homology,superfamily_FERM_central,smart_Band_41_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FERMT3	HGNC	ENSG00000149781	86	0	0.00	98	12	10.91	-	-	-
FREM2	0	genome.wustl.edu	37	13	39264280	39264280	+	Silent	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	13	39264280	39264280	C	A	SNP	FREM2	ENST00000280481	human	ensembl	69_37n	+1	known	silent	c.2799	p.V933	0.127	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	35	0	0.00	24	26	52.00	-	-	-
GFAP	0	genome.wustl.edu	37	17	42987611	42987611	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	17	42987611	42987611	C	A	SNP	GFAP	ENST00000435360	human	ensembl	69_37n	-1	known	missense	c.1189	p.D397Y	1.000	NULL	pfam_F	-	no_errors	GFAP	HGNC	ENSG00000131095	39	0	0.00	37	18	32.73	-	-	-
GGA1	0	genome.wustl.edu	37	22	38005244	38005244	+	RNA	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	22	38005244	38005244	G	A	SNP	GGA1	ENST00000484804	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GGA1	HGNC	ENSG00000100083	10	0	0.00	12	7	36.84	-	-	-
GIGYF2	0	genome.wustl.edu	37	2	233680382	233680382	+	Missense_Mutation	SNP	G	G	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	233680382	233680382	G	T	SNP	GIGYF2	ENST00000373566	human	ensembl	69_37n	+1	known	missense	c.2209	p.D737Y	1.000	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF2	HGNC	ENSG00000204120	203	0	0.00	233	83	26.27	-	-	-
GON4L	0	genome.wustl.edu	37	1	155792255	155792256	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	155792255	155792256	TT	-	DEL	GON4L	ENST00000368331	human	ensembl	69_37n	-1	known	frame_shift_del	c.710_709	p.N237fs	0.000:0.002	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	38	0	0.00	51	49	45.37	-	-	-
GON4L	0	genome.wustl.edu	37	1	155823536	155823536	+	Silent	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	155823536	155823536	T	C	SNP	GON4L	ENST00000368331	human	ensembl	69_37n	-1	known	silent	c.36	p.T12	0.000	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	98	0	0.00	180	34	15.89	-	-	-
GPR142	0	genome.wustl.edu	37	17	72365633	72365633	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	17	72365633	72365633	G	A	SNP	GPR142	ENST00000335666	human	ensembl	69_37n	+1	known	silent	c.270	p.G90	0.000	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR142	HGNC	ENSG00000257008	65	0	0.00	72	73	50.34	-	-	-
GPR55	0	genome.wustl.edu	37	2	231775322	231775322	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	231775322	231775322	C	T	SNP	GPR55	ENST00000392039	human	ensembl	69_37n	-1	known	missense	c.356	p.R119Q	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR55	HGNC	ENSG00000135898	48	0	0.00	55	11	16.67	-	-	-
IGSF10	0	genome.wustl.edu	37	3	151163264	151163264	+	Missense_Mutation	SNP	A	A	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	151163264	151163264	A	T	SNP	IGSF10	ENST00000282466	human	ensembl	69_37n	-1	known	missense	c.4505	p.V1502E	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	IGSF10	HGNC	ENSG00000152580	61	0	0.00	41	24	36.92	-	-	-
IGSF22	0	genome.wustl.edu	37	11	18739611	18739611	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	18739611	18739611	G	A	SNP	IGSF22	ENST00000513874	human	ensembl	69_37n	-1	known	silent	c.840	p.S280	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	IGSF22	HGNC	ENSG00000179057	68	0	0.00	43	47	52.22	-	-	-
IVL	0	genome.wustl.edu	37	1	152882383	152882383	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	152882383	152882383	C	T	SNP	IVL	ENST00000368764	human	ensembl	69_37n	+1	known	missense	c.110	p.P37L	0.023	pfam_Involucrin_N	pfam_Involucrin_N,pfam_Involucrin_rpt	-	no_errors	IVL	HGNC	ENSG00000163207	36	0	0.00	94	16	14.55	-	-	-
KIDINS220	0	genome.wustl.edu	37	2	8943114	8943114	+	Silent	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	8943114	8943114	C	T	SNP	KIDINS220	ENST00000256707	human	ensembl	69_37n	-1	known	silent	c.747	p.T249	0.114	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313	66	0	0.00	71	46	39.32	-	-	-
KIF17	0	genome.wustl.edu	37	1	20998492	20998492	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	20998492	20998492	G	A	SNP	KIF17	ENST00000247986	human	ensembl	69_37n	-1	known	silent	c.2661	p.D887	0.899	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245	125	0	0.00	98	54	35.29	-	-	-
LEKR1	0	genome.wustl.edu	37	3	156544156	156544156	+	RNA	SNP	C	C	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	156544156	156544156	C	G	SNP	LEKR1	ENST00000489350	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-6F2.7	Clone_based_vega_gene	ENSG00000197980	81	0	0.00	54	31	36.47	-	-	-
LEPR	0	genome.wustl.edu	37	1	66088677	66088678	+	RNA	INS	-	-	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	66088677	66088678	-	T	INS	LEPR	ENST00000471762	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	LEPR	HGNC	ENSG00000116678	46	0	0.00	31	23	42.59	-	-	-
LGR6	0	genome.wustl.edu	37	1	202287564	202287564	+	Silent	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	202287564	202287564	C	T	SNP	LGR6	ENST00000367278	human	ensembl	69_37n	+1	known	silent	c.2133	p.Y711	0.572	pfam_7TM_GPCR_Rhodpsn,prints_Gphrmn_rcpt	pfam_Leu-rich_rpt,pfam_7TM_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	LGR6	HGNC	ENSG00000133067	49	0	0.00	113	21	15.67	-	-	-
LIPH	0	genome.wustl.edu	37	3	185229372	185229372	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	185229372	185229372	C	T	SNP	LIPH	ENST00000296252	human	ensembl	69_37n	-1	known	missense	c.1208	p.G403D	1.000	superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	-	no_errors	LIPH	HGNC	ENSG00000163898	59	0	0.00	57	26	30.95	-	-	-
LMCD1	0	genome.wustl.edu	37	3	8578971	8578971	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	8578971	8578971	T	C	SNP	LMCD1	ENST00000157600	human	ensembl	69_37n	+1	known	missense	c.232	p.Y78H	1.000	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMCD1	HGNC	ENSG00000071282	35	0	0.00	34	20	37.04	-	-	-
LRRC37A11P	0	genome.wustl.edu	37	17	37188547	37188547	+	RNA	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	17	37188547	37188547	G	A	SNP	LRRC37A11P	ENST00000425901	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	LRRC37A11P	HGNC	ENSG00000214553	194	0	0.00	1015	239	19.03	-	-	-
LRRC37A11P	0	genome.wustl.edu	37	17	37190468	37190468	+	RNA	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	17	37190468	37190468	G	A	SNP	LRRC37A11P	ENST00000425901	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.045	-	-	-	no_errors	LRRC37A11P	HGNC	ENSG00000214553	194	0	0.00	811	183	18.41	-	-	-
LRRTM1	0	genome.wustl.edu	37	2	80530244	80530244	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	80530244	80530244	G	C	SNP	LRRTM1	ENST00000295057	human	ensembl	69_37n	-1	known	missense	c.701	p.S234C	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	110	0	0.00	139	38	21.35	-	-	-
LRRTM4	0	genome.wustl.edu	37	2	77746565	77746565	+	Missense_Mutation	SNP	T	T	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	77746565	77746565	T	G	SNP	LRRTM4	ENST00000409911	human	ensembl	69_37n	-1	known	missense	c.433	p.K145Q	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM4	HGNC	ENSG00000176204	63	0	0.00	46	23	33.33	-	-	-
LTBP4	0	genome.wustl.edu	37	19	41115529	41115529	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	19	41115529	41115529	C	G	SNP	LTBP4	ENST00000308370	human	ensembl	69_37n	+1	known	missense	c.1721	p.S574C	0.438	smart_EGF-like,smart_EGF-like_Ca-bd	pfam_EGF-like_Ca-bd,pfam_TB_dom,superfamily_TB_dom,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	LTBP4	HGNC	ENSG00000090006	70	0	0.00	82	31	27.43	-	-	-
LTF	0	genome.wustl.edu	37	3	46497446	46497446	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	46497446	46497446	G	A	SNP	LTF	ENST00000231751	human	ensembl	69_37n	-1	known	silent	c.339	p.A113	0.602	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin,prints_Peptidase_S60	pfam_Peptidase_S60,smart_Peptidase_S60,pirsf_Transferrin,prints_Peptidase_S60	-	no_errors	LTF	HGNC	ENSG00000012223	56	0	0.00	61	7	10.14	-	-	-
MOSPD2	0	genome.wustl.edu	37	X	14934369	14934369	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	X	14934369	14934369	G	C	SNP	MOSPD2	ENST00000380492	human	ensembl	69_37n	+1	known	missense	c.1237	p.E413Q	1.000	pfam_Major_sperm,superfamily_PapD-like,pfscan_Major_sperm	pfam_CRAL-TRIO_dom,pfam_Major_sperm,superfamily_CRAL-TRIO_dom,superfamily_PapD-like,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_Major_sperm	-	no_errors	MOSPD2	HGNC	ENSG00000130150	40	0	0.00	28	14	33.33	-	-	-
MYT1L	0	genome.wustl.edu	37	2	1820060	1820060	+	RNA	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	1820060	1820060	T	C	SNP	MYT1L	ENST00000471668	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MYT1L	HGNC	ENSG00000186487	47	0	0.00	77	9	10.47	-	-	-
NCOA5	0	genome.wustl.edu	37	20	44695747	44695747	+	Missense_Mutation	SNP	A	A	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	20	44695747	44695747	A	C	SNP	NCOA5	ENST00000290231	human	ensembl	69_37n	-1	known	missense	c.576	p.F192L	1.000	NULL	superfamily_Anticodon-bd	-	no_errors	NCOA5	HGNC	ENSG00000124160	47	0	0.00	115	29	20.14	-	-	-
OR8H1	0	genome.wustl.edu	37	11	56058069	56058069	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	56058069	56058069	A	-	DEL	OR8H1	ENST00000313022	human	ensembl	69_37n	-1	known	frame_shift_del	c.470	p.V157fs	0.001	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR8H1	HGNC	ENSG00000181693	87	0	0.00	58	20	25.00	-	-	-
PARP1	0	genome.wustl.edu	37	1	226562032	226562032	+	Silent	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	226562032	226562032	C	T	SNP	PARP1	ENST00000366794	human	ensembl	69_37n	-1	known	silent	c.1965	p.L655	1.000	pirsf_NAD_ADPRT	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_Znf_PARP,pfam_PADR1,pfam_WGR_domain,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_WGR_domain,pirsf_NAD_ADPRT,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP1	HGNC	ENSG00000143799	76	0	0.00	108	27	20.00	-	-	-
PCDHA11	0	genome.wustl.edu	37	5	140250555	140250555	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	5	140250555	140250555	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	69_37n	+1	known	missense	c.1867	p.V623M	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158	143	0	0.00	120	67	35.83	-	-	-
PCDHB6	0	genome.wustl.edu	37	5	140531179	140531179	+	Silent	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	5	140531179	140531179	C	A	SNP	PCDHB6	ENST00000231136	human	ensembl	69_37n	+1	known	silent	c.1341	p.P447	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211	122	0	0.00	113	51	31.10	-	-	-
PDE1C	0	genome.wustl.edu	37	7	31917594	31917594	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	7	31917594	31917594	C	A	SNP	PDE1C	ENST00000321453	human	ensembl	69_37n	-1	known	nonsense	c.481	p.E161*	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1C	HGNC	ENSG00000154678	47	0	0.00	80	18	18.18	-	-	-
PDILT	0	genome.wustl.edu	37	16	20387447	20387447	+	Silent	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	16	20387447	20387447	G	A	SNP	PDILT	ENST00000302451	human	ensembl	69_37n	-1	known	silent	c.486	p.S162	0.000	superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	PDILT	HGNC	ENSG00000169340	91	0	0.00	161	35	17.77	-	-	-
PHLDB1	0	genome.wustl.edu	37	11	118509627	118509627	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	118509627	118509627	G	C	SNP	PHLDB1	ENST00000361417	human	ensembl	69_37n	+1	known	missense	c.2554	p.D852H	1.000	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144	72	0	0.00	89	47	34.56	-	-	-
PHLDB1	0	genome.wustl.edu	37	11	118509911	118509911	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	118509911	118509911	G	C	SNP	PHLDB1	ENST00000361417	human	ensembl	69_37n	+1	known	missense	c.2678	p.R893T	0.994	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144	41	0	0.00	25	12	32.43	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	52	0	0.00	19	46	70.77	-	-	-
PRKACG	0	genome.wustl.edu	37	9	71628481	71628481	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	9	71628481	71628481	G	C	SNP	PRKACG	ENST00000377276	human	ensembl	69_37n	-1	known	missense	c.528	p.D176E	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059	50	0	0.00	44	32	42.11	-	-	-
PRKCA	0	genome.wustl.edu	37	17	64731690	64731690	+	Silent	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	17	64731690	64731690	C	T	SNP	PRKCA	ENST00000413366	human	ensembl	69_37n	+1	known	silent	c.1140	p.D380	0.655	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Protein_kinase_C_a/b/g,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_Ca-dep,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCA	HGNC	ENSG00000154229	105	0	0.00	114	34	22.97	-	-	-
PWWP2A	0	genome.wustl.edu	37	5	159520690	159520690	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	5	159520690	159520690	C	G	SNP	PWWP2A	ENST00000307063	human	ensembl	69_37n	-1	known	missense	c.967	p.D323H	1.000	NULL	pfam_PWWP,smart_PWWP,pfscan_PWWP	-	no_errors	PWWP2A	HGNC	ENSG00000170234	70	0	0.00	86	11	11.34	-	-	-
RHD	0	genome.wustl.edu	37	1	25634205	25634205	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	25634205	25634205	G	A	SNP	RHD	ENST00000342055	human	ensembl	69_37n	+1	putative	missense	c.1141	p.V381M	0.009	NULL	pfam_NH4_transpt_AmtB-like,superfamily_NH4_transpt_AmtB-like,prints_RhesusRHD	-	no_errors	RHD	HGNC	ENSG00000187010	79	0	0.00	19	4	17.39	-	-	-
RP1L1	0	genome.wustl.edu	37	8	10480628	10480628	+	Silent	SNP	G	G	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	8	10480628	10480628	G	T	SNP	RP1L1	ENST00000382483	human	ensembl	69_37n	-1	known	silent	c.84	p.T28	0.998	superfamily_Doublecortin_dom	pfam_Doublecortin_dom,superfamily_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	24	0	0.00	29	15	34.09	-	-	-
SDHAP1	0	genome.wustl.edu	37	3	195712586	195712586	+	RNA	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	195712586	195712586	C	T	SNP	SDHAP1	ENST00000413474	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485	99	1	1.00	31	5	13.89	-	-	-
SEPP1	0	genome.wustl.edu	37	5	42808293	42808293	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	5	42808293	42808293	G	C	SNP	SEPP1	ENST00000506577	human	ensembl	69_37n	-1	known	missense	c.163	p.L55V	1.000	pfam_Selenoprotein-P_N	pfam_Selenoprotein-P_N,pfam_SelP_C	-	pseudogene	SEPP1	HGNC	ENSG00000250722	81	0	0.00	125	18	12.59	-	-	-
SHANK2-AS3	0	genome.wustl.edu	37	11	70709531	70709531	+	RNA	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	70709531	70709531	C	A	SNP	SHANK2-AS3	ENST00000307548	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SHANK2-AS3	HGNC	ENSG00000171671	54	0	0.00	61	30	32.97	-	-	-
SLC24A4	0	genome.wustl.edu	37	14	92790284	92790284	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	14	92790284	92790284	C	G	SNP	SLC24A4	ENST00000532405	human	ensembl	69_37n	+1	known	missense	c.110	p.S37C	0.995	NULL	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger-like	-	no_errors	SLC24A4	HGNC	ENSG00000140090	166	0	0.00	177	63	26.14	-	-	-
SNORA75	0	genome.wustl.edu	37	2	232320618	232320618	+	RNA	SNP	G	G	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	232320618	232320618	G	A	SNP	SNORA75	ENST00000384158	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORA75	HGNC	ENSG00000206885	34	0	0.00	50	22	30.56	-	-	-
SPHKAP	0	genome.wustl.edu	37	2	228882097	228882097	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	228882097	228882097	C	T	SNP	SPHKAP	ENST00000392056	human	ensembl	69_37n	-1	known	missense	c.3473	p.S1158N	1.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	16	0	0.00	35	9	20.45	-	-	-
SPHKAP	0	genome.wustl.edu	37	2	228883414	228883414	+	Missense_Mutation	SNP	A	A	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	228883414	228883414	A	G	SNP	SPHKAP	ENST00000392056	human	ensembl	69_37n	-1	known	missense	c.2156	p.F719S	0.999	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	53	0	0.00	63	24	27.59	-	-	-
SRP68	0	genome.wustl.edu	37	17	74042252	74042252	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	17	74042252	74042252	G	C	SNP	SRP68	ENST00000307877	human	ensembl	69_37n	-1	known	nonsense	c.1166	p.S389*	0.998	NULL	NULL	-	no_errors	SRP68	HGNC	ENSG00000167881	79	0	0.00	55	21	27.63	-	-	-
STAG1	0	genome.wustl.edu	37	3	136059362	136059362	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	3	136059362	136059362	C	T	SNP	STAG1	ENST00000383202	human	ensembl	69_37n	-1	known	missense	c.3643	p.E1215K	1.000	NULL	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG1	HGNC	ENSG00000118007	36	0	0.00	20	12	37.50	-	-	-
TEX36	0	genome.wustl.edu	37	10	127344640	127344640	+	Silent	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	10	127344640	127344640	T	C	SNP	TEX36	ENST00000368821	human	ensembl	69_37n	-1	known	silent	c.390	p.V130	0.000	NULL	NULL	-	no_errors	TEX36	HGNC	ENSG00000175018	61	0	0.00	86	10	10.42	-	-	-
TPCN2	0	genome.wustl.edu	37	11	68821648	68821648	+	RNA	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	11	68821648	68821648	G	C	SNP	TPCN2	ENST00000534832	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.180	-	-	-	no_errors	TPCN2	HGNC	ENSG00000162341	26	0	0.00	35	6	14.63	-	-	-
TRPM8	0	genome.wustl.edu	37	2	234891789	234891789	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	2	234891789	234891789	G	C	SNP	TRPM8	ENST00000324695	human	ensembl	69_37n	+1	known	missense	c.2682	p.Q894H	0.356	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	TRPM8	HGNC	ENSG00000144481	60	0	0.00	100	34	25.37	-	-	-
TUBA3C	0	genome.wustl.edu	37	13	19751148	19751148	+	Silent	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	13	19751148	19751148	C	T	SNP	TUBA3C	ENST00000400113	human	ensembl	69_37n	-1	known	silent	c.975	p.P325	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	158	0	0.00	59	131	68.95	-	-	-
UBR1	0	genome.wustl.edu	37	15	43360113	43360113	+	Missense_Mutation	SNP	T	T	C			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	15	43360113	43360113	T	C	SNP	UBR1	ENST00000290650	human	ensembl	69_37n	-1	known	missense	c.781	p.T261A	0.777	pfam_ClpS_core,superfamily_Ribosomal_L7/12_C/ClpS-like	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459	39	0	0.00	40	30	42.25	-	-	-
ZBTB7B	0	genome.wustl.edu	37	1	154988894	154988894	+	Silent	SNP	C	C	A			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	1	154988894	154988894	C	A	SNP	ZBTB7B	ENST00000417934	human	ensembl	69_37n	+1	known	silent	c.1455	p.G485	1.000	pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7B	HGNC	ENSG00000160685	59	0	0.00	132	20	13.07	-	-	-
ZMYM3	0	genome.wustl.edu	37	X	70467295	70467295	+	Missense_Mutation	SNP	C	C	G			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	X	70467295	70467295	C	G	SNP	ZMYM3	ENST00000373988	human	ensembl	69_37n	-1	known	missense	c.2220	p.Q740H	1.000	pfam_Znf_MYM,smart_TRASH	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH	-	no_errors	ZMYM3	HGNC	ENSG00000147130	39	0	0.00	74	9	10.84	-	-	-
ZNF536	0	genome.wustl.edu	37	19	30935417	30935417	+	Silent	SNP	C	C	T			TCGA-A7-A4SF-01A-11D-A25Q-09	TCGA-A7-A4SF-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd6babb0-c2bb-4a12-b522-448f993e86f0	7b28f197-a6a1-4649-a37e-fd1b63fe3a57	19	30935417	30935417	C	T	SNP	ZNF536	ENST00000355537	human	ensembl	69_37n	+1	known	silent	c.948	p.I316	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	59	0	0.00	91	38	29.46	-	-	-
