Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AXDND1	0	genome.wustl.edu	37	1	179452320	179452320	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	1	179452320	179452320	T	G	SNP	AXDND1	ENST00000367618	human	ensembl	69_37n	+1	known	missense	c.2055	p.N685K	0.972	NULL	pfam_Axonemal_dynein_light_chain	-	no_errors	AXDND1	HGNC	ENSG00000162779	183	0	0.00	309	40	11.46	-	-	-
BARD1	0	genome.wustl.edu	37	2	215657118	215657118	+	Silent	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	2	215657118	215657118	C	T	SNP	BARD1	ENST00000260947	human	ensembl	69_37n	-1	known	silent	c.267	p.P89	1.000	NULL	pfam_Ankyrin_rpt,pfam_BRCT_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_BRCT_dom,smart_Ankyrin_rpt,smart_BRCT_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BRCT_dom,pfscan_Znf_RING,prints_Ankyrin_rpt	-	no_errors	BARD1	HGNC	ENSG00000138376	128	0	0.00	176	65	26.97	-	-	-
BRIP1	0	genome.wustl.edu	37	17	59821953	59821953	+	Splice_Site	SNP	C	C	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	17	59821953	59821953	C	G	SNP	BRIP1	ENST00000259008	human	ensembl	69_37n	-1	known	splice_site	c.2098-1	e14-1	1.000	-	-	-	no_errors	BRIP1	HGNC	ENSG00000136492	299	0	0.00	104	32	23.53	-	-	-
C17orf97	0	genome.wustl.edu	37	17	263606	263606	+	Silent	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	17	263606	263606	C	T	SNP	C17orf97	ENST00000360127	human	ensembl	69_37n	+1	known	silent	c.972	p.G324	0.001	NULL	NULL	-	no_errors	C17orf97	HGNC	ENSG00000187624	18	0	0.00	24	5	17.24	-	-	-
CACNA2D4	0	genome.wustl.edu	37	12	1949960	1949960	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	12	1949960	1949960	C	T	SNP	CACNA2D4	ENST00000537784	human	ensembl	69_37n	-1	known	missense	c.337	p.D113N	0.763	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CACNA2D4	HGNC	ENSG00000151062	33	0	0.00	37	71	65.74	-	-	-
CRIPAK	0	genome.wustl.edu	37	4	1388375	1388376	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	4	1388375	1388376	-	CA	INS	CRIPAK	ENST00000324803	human	ensembl	69_37n	+1	known	frame_shift_ins	c.76_77	p.C27fs	0.039:0.487	NULL	smart_Post-SET_dom	-	no_errors	CRIPAK	HGNC	ENSG00000179979	41	0	0.00	139	27	16.27	-	-	-
CRIPAK	0	genome.wustl.edu	37	4	1388622	1388623	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	4	1388622	1388623	-	CA	INS	CRIPAK	ENST00000324803	human	ensembl	69_37n	+1	known	frame_shift_ins	c.323_324	p.C110fs	0.001:0.028	smart_Post-SET_dom	smart_Post-SET_dom	-	no_errors	CRIPAK	HGNC	ENSG00000179979	17	0	0.00	53	12	18.46	-	-	-
CUL4B	0	genome.wustl.edu	37	X	119694135	119694135	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	X	119694135	119694135	G	C	SNP	CUL4B	ENST00000404115	human	ensembl	69_37n	-1	known	missense	c.413	p.S138C	0.998	NULL	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL4B	HGNC	ENSG00000158290	48	0	0.00	102	18	15.00	-	-	-
DHTKD1	0	genome.wustl.edu	37	10	12136161	12136161	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	10	12136161	12136161	C	T	SNP	DHTKD1	ENST00000263035	human	ensembl	69_37n	+1	known	missense	c.1249	p.R417C	1.000	pfam_DH_E1,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192	44	0	0.00	131	117	46.99	-	-	-
DIS3L	0	genome.wustl.edu	37	15	66618592	66618592	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	15	66618592	66618592	G	A	SNP	DIS3L	ENST00000319212	human	ensembl	69_37n	+1	known	nonsense	c.2091	p.W697*	0.999	pfam_RNase_II/R,smart_RNase_II/R	pfam_RNase_II/R,smart_RNase_II/R	-	no_errors	DIS3L	HGNC	ENSG00000166938	100	0	0.00	57	8	12.31	-	-	-
DNA2	0	genome.wustl.edu	37	10	70218891	70218891	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	10	70218891	70218891	G	A	SNP	DNA2	ENST00000399180	human	ensembl	69_37n	-1	known	missense	c.947	p.S316L	0.385	pfam_DNA_replication_fac_Dna2	pfam_DNA_replication_fac_Dna2	-	no_errors	DNA2	HGNC	ENSG00000138346	33	0	0.00	259	49	15.86	-	-	-
DSCAML1	0	genome.wustl.edu	37	11	117342753	117342753	+	Splice_Site	SNP	T	T	C			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	11	117342753	117342753	T	C	SNP	DSCAML1	ENST00000321322	human	ensembl	69_37n	-1	known	splice_site	c.2966-2	e15-2	1.000	-	-	-	no_errors	DSCAML1	HGNC	ENSG00000177103	48	0	0.00	95	76	44.44	-	-	-
DSG4	0	genome.wustl.edu	37	18	28972180	28972182	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	18	28972180	28972182	TCT	-	DEL	DSG4	ENST00000359747	human	ensembl	69_37n	+1	known	in_frame_del	c.882_884	p.L295in_frame_del	1.000:0.999:0.987	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmo_cadherin,pfscan_Cadherin	-	no_errors	DSG4	HGNC	ENSG00000175065	109	0	0.00	137	28	16.97	-	-	-
DYNC1H1	0	genome.wustl.edu	37	14	102452147	102452147	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	14	102452147	102452147	A	G	SNP	DYNC1H1	ENST00000360184	human	ensembl	69_37n	+1	known	missense	c.1585	p.N529D	1.000	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	101	0	0.00	212	36	14.52	-	-	-
ERP29	0	genome.wustl.edu	37	12	112460034	112460034	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	12	112460034	112460034	C	T	SNP	ERP29	ENST00000261735	human	ensembl	69_37n	+1	known	missense	c.364	p.R122W	0.997	pfam_ERp29_N,superfamily_Thioredoxin-like_fold,pirsf_ER_p29	pfam_ERp29_N,pfam_ER_p29_C,superfamily_ER_p29_C,superfamily_Thioredoxin-like_fold,pirsf_ER_p29	-	no_errors	ERP29	HGNC	ENSG00000089248	77	0	0.00	90	12	11.76	-	-	-
FAM71B	0	genome.wustl.edu	37	5	156589516	156589516	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	5	156589516	156589516	C	T	SNP	FAM71B	ENST00000302938	human	ensembl	69_37n	-1	known	missense	c.1760	p.S587N	0.000	NULL	pfam_DUF3699	-	no_errors	FAM71B	HGNC	ENSG00000170613	179	0	0.00	200	25	11.11	-	-	-
FBXL21	0	genome.wustl.edu	37	5	135273118	135273118	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	5	135273118	135273118	A	T	SNP	FBXL21	ENST00000297158	human	ensembl	69_37n	+1	known	missense	c.371	p.D124V	1.000	NULL	NULL	-	pseudogene	FBXL21	HGNC	ENSG00000164616	47	0	0.00	132	22	14.29	-	-	-
GPR52	0	genome.wustl.edu	37	1	174417939	174417939	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	1	174417939	174417939	C	A	SNP	GPR52	ENST00000367685	human	ensembl	69_37n	+1	known	nonsense	c.690	p.C230*	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	GPR52	HGNC	ENSG00000203737	306	0	0.00	208	127	37.80	-	-	-
GRIN3A	0	genome.wustl.edu	37	9	104499857	104499857	+	Silent	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	9	104499857	104499857	C	T	SNP	GRIN3A	ENST00000361820	human	ensembl	69_37n	-1	known	silent	c.405	p.L135	1.000	NULL	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	15	0	0.00	19	21	52.50	-	-	-
HLA-C	0	genome.wustl.edu	37	6	31238880	31238880	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	6	31238880	31238880	C	T	SNP	HLA-C	ENST00000539307	human	ensembl	69_37n	-1	known	missense	c.700	p.E234K	0.999	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,prints_MHC_I_a_a1/a2	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like,prints_MHC_I_a_a1/a2	-	no_errors	HLA-C	HGNC	ENSG00000204525	19	0	0.00	16	7	30.43	-	-	-
HPS4	0	genome.wustl.edu	37	22	26860227	26860227	+	Silent	SNP	T	T	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	22	26860227	26860227	T	G	SNP	HPS4	ENST00000398141	human	ensembl	69_37n	-1	known	silent	c.1408	p.R470	0.001	NULL	NULL	-	no_errors	HPS4	HGNC	ENSG00000100099	92	0	0.00	31	78	71.56	-	-	-
HSD17B6	0	genome.wustl.edu	37	12	57181033	57181033	+	Silent	SNP	T	T	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	12	57181033	57181033	T	A	SNP	HSD17B6	ENST00000322165	human	ensembl	69_37n	+1	known	silent	c.861	p.A287	0.022	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B6	HGNC	ENSG00000025423	69	0	0.00	86	19	18.10	-	-	-
KLHL7	0	genome.wustl.edu	37	7	23163424	23163424	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	7	23163424	23163424	T	G	SNP	KLHL7	ENST00000339077	human	ensembl	69_37n	+1	known	missense	c.149	p.V50G	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550	34	0	0.00	223	45	16.79	-	-	-
KRTAP1-1	0	genome.wustl.edu	37	17	39197512	39197512	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	17	39197512	39197512	C	-	DEL	KRTAP1-1	ENST00000306271	human	ensembl	69_37n	-1	known	frame_shift_del	c.138	p.Q46fs	0.109	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP1-1	HGNC	ENSG00000188581	45	0	0.00	16	17	51.52	-	-	-
LRRC16B	0	genome.wustl.edu	37	14	24528876	24528876	+	Silent	SNP	T	T	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	14	24528876	24528876	T	G	SNP	LRRC16B	ENST00000342740	human	ensembl	69_37n	+1	known	silent	c.1803	p.T601	0.997	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	10	0	0.00	125	43	25.60	-	-	-
LRRN1	0	genome.wustl.edu	37	3	3888104	3888104	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	3	3888104	3888104	A	C	SNP	LRRN1	ENST00000319331	human	ensembl	69_37n	+1	known	missense	c.1779	p.E593D	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	LRRN1	HGNC	ENSG00000175928	288	0	0.00	193	77	28.52	-	-	-
LRTM2	0	genome.wustl.edu	37	12	1943503	1943503	+	Silent	SNP	C	C	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	12	1943503	1943503	C	A	SNP	LRTM2	ENST00000299194	human	ensembl	69_37n	+1	known	silent	c.729	p.P243	1.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM2	HGNC	ENSG00000166159	19	0	0.00	13	11	45.83	-	-	-
LRTM2	0	genome.wustl.edu	37	12	1943594	1943594	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	12	1943594	1943594	C	T	SNP	LRTM2	ENST00000299194	human	ensembl	69_37n	+1	known	missense	c.820	p.P274S	0.994	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM2	HGNC	ENSG00000166159	20	0	0.00	16	6	27.27	-	-	-
MAML1	0	genome.wustl.edu	37	5	179195873	179195873	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	5	179195873	179195873	C	T	SNP	MAML1	ENST00000292599	human	ensembl	69_37n	+1	known	missense	c.1754	p.P585L	0.948	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML1	HGNC	ENSG00000161021	205	0	0.00	69	21	23.33	-	-	-
MDN1	0	genome.wustl.edu	37	6	90426511	90426511	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	6	90426511	90426511	C	G	SNP	MDN1	ENST00000369393	human	ensembl	69_37n	-1	known	missense	c.6601	p.E2201Q	1.000	smart_AAA+_ATPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	136	0	0.00	89	241	73.03	-	-	-
MUC16	0	genome.wustl.edu	37	19	9048936	9048937	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	19	9048936	9048937	AA	-	DEL	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	frame_shift_del	c.32695_32694	p.P10900fs	0.000:0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	706	0	0.00	109	53	32.72	-	-	-
MYBL1	0	genome.wustl.edu	37	8	67485600	67485600	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	8	67485600	67485600	C	T	SNP	MYBL1	ENST00000522677	human	ensembl	69_37n	-1	known	missense	c.1612	p.G538R	1.000	pfam_C-myb_C	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697	281	0	0.00	498	92	15.59	-	-	-
NEB	0	genome.wustl.edu	37	2	152375530	152375532	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	2	152375530	152375532	CTT	-	DEL	NEB	ENST00000397345	human	ensembl	69_37n	-1	known	in_frame_del	c.22644_22642	p.K7548in_frame_del	0.987:1.000:1.000	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom_bac,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,prints_Nebulin,pfscan_Nebulin_35r-motif,pfscan_SH3_domain	-	no_errors	NEB	HGNC	ENSG00000183091	54	0	0.00	251	159	38.78	-	-	-
NR4A3	0	genome.wustl.edu	37	9	102609749	102609749	+	Silent	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	9	102609749	102609749	C	T	SNP	NR4A3	ENST00000330847	human	ensembl	69_37n	+1	known	silent	c.1518	p.F506	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Nuc_orph_rcpt,prints_Retinoic_acid_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508	90	0	0.00	222	54	19.57	-	-	-
NRXN1	0	genome.wustl.edu	37	2	50850528	50850528	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	2	50850528	50850528	G	A	SNP	NRXN1	ENST00000402717	human	ensembl	69_37n	-1	known	missense	c.1058	p.A353V	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	155	0	0.00	207	45	17.86	-	-	-
NSUN6	0	genome.wustl.edu	37	10	18931451	18931451	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	10	18931451	18931451	G	A	SNP	NSUN6	ENST00000377304	human	ensembl	69_37n	-1	known	missense	c.265	p.H89Y	1.000	NULL	pfam_Fmu/NOL1/Nop2p,pfam_rRNA_MeTrfase_FtsJ_dom,pfam_PUA,superfamily_PUA-like_domain,prints_RCMT,pfscan_PUA	-	no_errors	NSUN6	HGNC	ENSG00000241058	291	0	0.00	124	28	18.42	-	-	-
NUP160	0	genome.wustl.edu	37	11	47859145	47859146	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	11	47859145	47859146	CT	-	DEL	NUP160	ENST00000378460	human	ensembl	69_37n	-1	known	frame_shift_del	c.779_778	p.S260fs	1.000:1.000	pfam_Nucleoporin_Nup160	pfam_Nucleoporin_Nup160	-	no_errors	NUP160	HGNC	ENSG00000030066	315	0	0.00	92	52	36.11	-	-	-
PDS5B	0	genome.wustl.edu	37	13	33275522	33275522	+	Silent	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	13	33275522	33275522	C	T	SNP	PDS5B	ENST00000315596	human	ensembl	69_37n	+1	known	silent	c.1803	p.I601	0.994	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642	80	0	0.00	227	132	36.77	-	-	-
PEX6	0	genome.wustl.edu	37	6	42932852	42932852	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	6	42932852	42932852	C	T	SNP	PEX6	ENST00000304611	human	ensembl	69_37n	-1	known	missense	c.2627	p.R876Q	1.000	NULL	pfam_ATPase_AAA_core,smart_AAA+_ATPase	-	no_errors	PEX6	HGNC	ENSG00000124587	81	0	0.00	109	24	17.91	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	74	0	0.00	123	89	41.98	-	-	-
PNLIP	0	genome.wustl.edu	37	10	118315541	118315541	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	10	118315541	118315541	T	G	SNP	PNLIP	ENST00000369221	human	ensembl	69_37n	+1	known	missense	c.841	p.L281V	0.254	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	pfam_Lipase_N,pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pirsf_Lipoprotein_lipase_LIPH,pfscan_LipOase_LH2,prints_Lipase,prints_Lipase_panc	-	no_errors	PNLIP	HGNC	ENSG00000175535	211	0	0.00	212	46	17.83	-	-	-
PRDM1	0	genome.wustl.edu	37	6	106553776	106553776	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	6	106553776	106553776	G	A	SNP	PRDM1	ENST00000369096	human	ensembl	69_37n	+1	known	missense	c.1741	p.A581T	0.998	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_Znf_PRDM1,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM1,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM1	HGNC	ENSG00000057657	74	0	0.00	27	11	28.21	-	-	-
PRLR	0	genome.wustl.edu	37	5	35086314	35086314	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	5	35086314	35086314	C	T	SNP	PRLR	ENST00000382002	human	ensembl	69_37n	-1	known	missense	c.199	p.E67K	1.000	pfam_Growth/epo_recpt_lig-bind,pfam_IL6_recept-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Growth/epo_recpt_lig-bind,pfam_IL6_recept-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PRLR	HGNC	ENSG00000113494	185	0	0.00	91	76	45.24	-	-	-
RBM27	0	genome.wustl.edu	37	5	145641353	145641353	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	5	145641353	145641353	A	G	SNP	RBM27	ENST00000265271	human	ensembl	69_37n	+1	known	missense	c.2174	p.H725R	0.944	NULL	pfam_PWI,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009	120	0	0.00	28	20	40.82	-	-	-
RBM5	0	genome.wustl.edu	37	3	50154522	50154522	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	3	50154522	50154522	C	T	SNP	RBM5	ENST00000347869	human	ensembl	69_37n	+1	known	nonsense	c.2110	p.R704*	0.996	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756	42	0	0.00	157	82	34.31	-	-	-
SALL2	0	genome.wustl.edu	37	14	21991858	21991858	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	14	21991858	21991858	G	A	SNP	SALL2	ENST00000546363	human	ensembl	69_37n	-1	putative	missense	c.1580	p.S527F	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SALL2	HGNC	ENSG00000165821	78	0	0.00	54	24	30.77	-	-	-
SLC24A3	0	genome.wustl.edu	37	20	19560658	19560658	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	20	19560658	19560658	C	G	SNP	SLC24A3	ENST00000328041	human	ensembl	69_37n	+1	known	missense	c.363	p.F121L	1.000	tigrfam_K-dep_Na/Ca-exchanger-like	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger-like	-	no_errors	SLC24A3	HGNC	ENSG00000185052	67	0	0.00	598	109	15.40	-	-	-
SNCAIP	0	genome.wustl.edu	37	5	121758575	121758575	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	5	121758575	121758575	G	C	SNP	SNCAIP	ENST00000379533	human	ensembl	69_37n	+1	known	missense	c.284	p.S95T	0.984	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692	121	0	0.00	34	52	60.47	-	-	-
SNW1	0	genome.wustl.edu	37	14	78205185	78205185	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	14	78205185	78205185	G	A	SNP	SNW1	ENST00000261531	human	ensembl	69_37n	-1	known	nonsense	c.469	p.Q157*	1.000	NULL	pfam_SKI-int_prot_SKIP_SNW-dom,superfamily_Signal_recog_particl_SRP54_hlx	-	no_errors	SNW1	HGNC	ENSG00000100603	127	0	0.00	132	65	32.83	-	-	-
SSPN	0	genome.wustl.edu	37	12	26383694	26383694	+	Silent	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	12	26383694	26383694	C	T	SNP	SSPN	ENST00000242729	human	ensembl	69_37n	+1	known	silent	c.417	p.A139	0.277	pfam_CD20-like	pfam_CD20-like	-	no_errors	SSPN	HGNC	ENSG00000123096	67	0	0.00	135	22	14.01	-	-	-
STAG3L1	0	genome.wustl.edu	37	7	74991317	74991317	+	RNA	DEL	G	G	-			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	7	74991317	74991317	G	-	DEL	STAG3L1	ENST00000402225	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.943	-	-	-	no_errors	STAG3L1	HGNC	ENSG00000205583	94	0	0.00	40	10	19.23	-	-	-
TPR	0	genome.wustl.edu	37	1	186287865	186287865	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	1	186287865	186287865	C	T	SNP	TPR	ENST00000367478	human	ensembl	69_37n	-1	known	missense	c.6664	p.V2222M	0.995	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410	126	0	0.00	112	38	25.33	-	-	-
TSG101	0	genome.wustl.edu	37	11	18531179	18531179	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	11	18531179	18531179	T	C	SNP	TSG101	ENST00000251968	human	ensembl	69_37n	-1	known	missense	c.391	p.M131V	1.000	pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD	pfam_UEV_N,pfam_Steadiness_box,superfamily_UBQ-conjugating_enzyme/RWD	-	no_errors	TSG101	HGNC	ENSG00000074319	156	0	0.00	89	17	16.04	-	-	-
TTYH2	0	genome.wustl.edu	37	17	72248454	72248454	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	17	72248454	72248454	G	T	SNP	TTYH2	ENST00000269346	human	ensembl	69_37n	+1	known	missense	c.1198	p.A400S	0.992	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH2	HGNC	ENSG00000141540	42	0	0.00	177	35	16.51	-	-	-
UCHL3	0	genome.wustl.edu	37	13	76141383	76141383	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	13	76141383	76141383	A	G	SNP	UCHL3	ENST00000377595	human	ensembl	69_37n	+1	known	missense	c.361	p.K121E	1.000	pfam_Peptidase_C12	pfam_Peptidase_C12,prints_Peptidase_C12	-	no_errors	UCHL3	HGNC	ENSG00000118939	244	0	0.00	107	43	28.67	-	-	-
USP51	0	genome.wustl.edu	37	X	55513981	55513981	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	X	55513981	55513981	G	C	SNP	USP51	ENST00000500968	human	ensembl	69_37n	-1	known	missense	c.1392	p.H464Q	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19	-	no_errors	USP51	HGNC	ENSG00000247746	175	0	0.00	189	28	12.90	-	-	-
WHSC1	0	genome.wustl.edu	37	4	1920229	1920229	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	4	1920229	1920229	A	G	SNP	WHSC1	ENST00000382891	human	ensembl	69_37n	+1	known	missense	c.1289	p.D430G	0.278	NULL	pfam_PWWP,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_superfamily,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_PWWP,smart_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_superfamily	-	no_errors	WHSC1	HGNC	ENSG00000109685	37	0	0.00	73	26	25.74	-	-	-
ZC3H18	0	genome.wustl.edu	37	16	88677692	88677693	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	16	88677692	88677693	GA	-	DEL	ZC3H18	ENST00000301011	human	ensembl	69_37n	+1	known	frame_shift_del	c.1223_1224	p.E411fs	0.616:0.522	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545	8	0	0.00	4	2	33.33	-	-	-
ZFHX4	0	genome.wustl.edu	37	8	77620135	77620135	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06R-01A-11D-A015-09	TCGA-A8-A06R-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6b00eff-6c4e-4d79-a9b1-8fb1f3090816	bf64ab88-5956-4a6a-a303-6a2cbb82f649	8	77620135	77620135	A	G	SNP	ZFHX4	ENST00000521891	human	ensembl	69_37n	+1	known	missense	c.2945	p.K982R	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	141	0	0.00	188	22	10.48	-	-	-
