Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA9	0	genome.wustl.edu	37	17	66982354	66982354	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	66982354	66982354	C	T	SNP	ABCA9	ENST00000340001	human	ensembl	69_37n	-1	known	missense	c.4159	p.A1387T	0.503	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258	253	0	0.00	266	72	21.18	-	-	-
ACTN3	0	genome.wustl.edu	37	11	66318787	66318787	+	Silent	SNP	T	T	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	66318787	66318787	T	C	SNP	ACTN3	ENST00000502692	human	ensembl	69_37n	+1	known	silent	c.354	p.N118	0.971	NULL	NULL	-	pseudogene	ACTN3	HGNC	ENSG00000248746	33	0	0.00	42	5	10.64	-	-	-
AHNAK2	0	genome.wustl.edu	37	14	105415953	105415953	+	Silent	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	14	105415953	105415953	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	69_37n	-1	known	silent	c.5835	p.P1945	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	53	0	0.00	38	13	25.49	-	-	-
BTK	0	genome.wustl.edu	37	X	100613405	100613405	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	X	100613405	100613405	C	T	SNP	BTK	ENST00000308731	human	ensembl	69_37n	-1	known	missense	c.995	p.R332H	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,prints_SH2,prints_Znf_Btk_motif	-	no_errors	BTK	HGNC	ENSG00000010671	192	0	0.00	254	31	10.88	-	-	-
CCDC27	0	genome.wustl.edu	37	1	3688024	3688025	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	3688024	3688025	-	C	INS	CCDC27	ENST00000294600	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1908_1909	p.L638fs	0.063:0.211	NULL	superfamily_Prefoldin	-	no_errors	CCDC27	HGNC	ENSG00000162592	38	0	0.00	32	4	11.11	-	-	-
CHD2	0	genome.wustl.edu	37	15	93545466	93545466	+	Silent	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	93545466	93545466	G	A	SNP	CHD2	ENST00000557381	human	ensembl	69_37n	+1	putative	silent	c.4197	p.E1399	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575	429	1	0.23	350	145	29.23	-	-	-
CNTNAP1	0	genome.wustl.edu	37	17	40847561	40847561	+	Silent	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	40847561	40847561	G	A	SNP	CNTNAP1	ENST00000264638	human	ensembl	69_37n	+1	known	silent	c.3015	p.P1005	0.019	superfamily_ConA-like_lec_gl	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797	84	0	0.00	85	13	13.27	-	-	-
DAB2IP	0	genome.wustl.edu	37	9	124521225	124521225	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	9	124521225	124521225	G	A	SNP	DAB2IP	ENST00000408936	human	ensembl	69_37n	+1	known	missense	c.565	p.E189K	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DUF3498,pfam_RasGAP,pfam_C2_Ca-dep,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_C2_Ca-dep,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	DAB2IP	HGNC	ENSG00000136848	11	0	0.00	16	7	30.43	-	-	-
DENND1B	0	genome.wustl.edu	37	1	197611863	197611863	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	197611863	197611863	A	C	SNP	DENND1B	ENST00000367396	human	ensembl	69_37n	-1	known	missense	c.650	p.I217S	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1B	HGNC	ENSG00000213047	66	0	0.00	46	17	26.98	-	-	-
DNAH11	0	genome.wustl.edu	37	7	21744132	21744132	+	Silent	SNP	T	T	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	7	21744132	21744132	T	C	SNP	DNAH11	ENST00000328843	human	ensembl	69_37n	+1	known	silent	c.6375	p.G2125	0.995	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877	101	0	0.00	73	40	35.09	-	-	-
DOCK8	0	genome.wustl.edu	37	9	429793	429793	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	9	429793	429793	C	-	DEL	DOCK8	ENST00000453981	human	ensembl	69_37n	+1	known	frame_shift_del	c.4565	p.R1523fs	1.000	superfamily_ARM-type_fold	pfam_DOCK,pfam_DUF3398,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	50	0	0.00	10	2	16.67	-	-	-
ETV4	0	genome.wustl.edu	37	17	41610700	41610701	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	41610700	41610701	-	G	INS	ETV4	ENST00000319349	human	ensembl	69_37n	-1	known	frame_shift_ins	c.400_399	p.R133fs	1.000:1.000	pfam_ETS_PEA3_N	pfam_ETS_PEA3_N,pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ETV4	HGNC	ENSG00000175832	26	0	0.00	38	5	11.63	-	-	-
F13A1	0	genome.wustl.edu	37	6	6206822	6206822	+	Silent	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	6206822	6206822	G	A	SNP	F13A1	ENST00000445223	human	ensembl	69_37n	-1	putative	silent	c.276	p.F92	0.008	smart_Transglutaminase-like	pfam_Transglutaminase-like,smart_Transglutaminase-like	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	F13A1	HGNC	ENSG00000124491	20	0	0.00	13	6	31.58	-	-	-
FRMPD1	0	genome.wustl.edu	37	9	37746347	37746348	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	9	37746347	37746348	-	G	INS	FRMPD1	ENST00000377765	human	ensembl	69_37n	+1	known	frame_shift_ins	c.4318_4319	p.V1442fs	0.994:1.000	NULL	pfam_FERM_central,pfam_PDZ,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD1	HGNC	ENSG00000070601	22	0	0.00	16	2	11.11	-	-	-
GJA10	0	genome.wustl.edu	37	6	90604250	90604250	+	Silent	SNP	G	G	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	90604250	90604250	G	T	SNP	GJA10	ENST00000369352	human	ensembl	69_37n	+1	known	silent	c.63	p.V21	1.000	pfam_Connexin_N,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJA10	HGNC	ENSG00000135355	347	0	0.00	274	66	19.41	-	-	-
GPR98	0	genome.wustl.edu	37	5	90050985	90050985	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	5	90050985	90050985	G	A	SNP	GPR98	ENST00000405460	human	ensembl	69_37n	+1	known	missense	c.11563	p.E3855K	0.009	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	184	0	0.00	117	24	17.02	-	-	-
HERC2	0	genome.wustl.edu	37	15	28421694	28421694	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	28421694	28421694	C	T	SNP	HERC2	ENST00000261609	human	ensembl	69_37n	-1	known	missense	c.9566	p.G3189E	1.000	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5,superfamily_UBA-like,superfamily_CUB,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	278	0	0.00	269	43	13.69	-	-	-
HERC2	0	genome.wustl.edu	37	15	28518115	28518115	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	28518115	28518115	C	A	SNP	HERC2	ENST00000261609	human	ensembl	69_37n	-1	known	missense	c.836	p.G279V	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5,superfamily_UBA-like,superfamily_CUB,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	32	0	0.00	19	30	61.22	-	-	-
HPS5	0	genome.wustl.edu	37	11	18339303	18339303	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	18339303	18339303	G	C	SNP	HPS5	ENST00000349215	human	ensembl	69_37n	-1	known	missense	c.103	p.L35V	1.000	superfamily_WD40_repeat_dom,pirsf_BLOC-2_complex_Hps5_subunit	superfamily_WD40_repeat_dom,pirsf_BLOC-2_complex_Hps5_subunit	-	no_errors	HPS5	HGNC	ENSG00000110756	24	0	0.00	45	35	43.75	-	-	-
HTR1F	0	genome.wustl.edu	37	3	88039975	88039975	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	3	88039975	88039975	G	C	SNP	HTR1F	ENST00000319595	human	ensembl	69_37n	+1	known	missense	c.76	p.V26L	0.970	prints_5HT1F_rcpt,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_5HT1F_rcpt,prints_7TM_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR1F	HGNC	ENSG00000179097	287	0	0.00	119	47	28.31	-	-	-
IGHV2-26	0	genome.wustl.edu	37	14	106757840	106757840	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	14	106757840	106757840	C	T	SNP	IGHV2-26	ENST00000390611	human	ensembl	69_37n	-1	known	missense	c.167	p.S56N	0.001	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV2-26	HGNC	ENSG00000211951	92	0	0.00	106	21	16.54	-	-	-
KCNJ12	0	genome.wustl.edu	37	17	21318698	21318698	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	21318698	21318698	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	69_37n	+1	known	missense	c.44	p.S15L	0.996	pfam_K_chnl_inward-rec_Kir_N	pfam_K_chnl_inward-rec_Kir_Cr2,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir_Cr2,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	8	0	0.00	8	4	33.33	-	-	-
KIAA1377	0	genome.wustl.edu	37	11	101829065	101829065	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	101829065	101829065	C	A	SNP	KIAA1377	ENST00000263468	human	ensembl	69_37n	+1	known	missense	c.673	p.L225I	0.998	NULL	NULL	-	no_errors	KIAA1377	HGNC	ENSG00000110318	687	0	0.00	430	110	20.37	-	-	-
KRT35	0	genome.wustl.edu	37	17	39637093	39637093	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	39637093	39637093	C	T	SNP	KRT35	ENST00000393989	human	ensembl	69_37n	-1	known	missense	c.257	p.G86D	1.000	NULL	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT35	HGNC	ENSG00000197079	49	0	0.00	29	10	25.64	-	-	-
KRTAP10-8	0	genome.wustl.edu	37	21	46032028	46032028	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	21	46032028	46032028	C	T	SNP	KRTAP10-8	ENST00000334662	human	ensembl	69_37n	+1	known	missense	c.11	p.A4V	0.844	NULL	pfam_PMG	-	no_errors	KRTAP10-8	HGNC	ENSG00000187766	183	0	0.00	155	53	25.36	-	-	-
LRP4	0	genome.wustl.edu	37	11	46880600	46880600	+	Silent	SNP	T	T	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	46880600	46880600	T	C	SNP	LRP4	ENST00000378623	human	ensembl	69_37n	-1	known	silent	c.5652	p.R1884	0.999	NULL	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,pfam_EGF-like_Ca-bd,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP4	HGNC	ENSG00000134569	38	0	0.00	25	10	28.57	-	-	-
METAP2	0	genome.wustl.edu	37	12	95888899	95888899	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	12	95888899	95888899	G	T	SNP	METAP2	ENST00000323666	human	ensembl	69_37n	+1	known	nonsense	c.757	p.G253*	1.000	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP2	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP2	-	no_errors	METAP2	HGNC	ENSG00000111142	227	0	0.00	98	132	57.39	-	-	-
METAP2	0	genome.wustl.edu	37	12	95888900	95888900	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	12	95888900	95888900	G	T	SNP	METAP2	ENST00000323666	human	ensembl	69_37n	+1	known	missense	c.758	p.G253V	1.000	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP2	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,prints_Pept_M24_MAP,tigrfam_Pept_M24A_MAP2	-	no_errors	METAP2	HGNC	ENSG00000111142	224	2	0.88	95	132	58.15	-	-	-
MYH4	0	genome.wustl.edu	37	17	10366448	10366448	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	10366448	10366448	A	G	SNP	MYH4	ENST00000255381	human	ensembl	69_37n	-1	known	missense	c.863	p.I288T	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	196	0	0.00	96	41	29.93	-	-	-
NIN	0	genome.wustl.edu	37	14	51288724	51288724	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	14	51288724	51288724	A	C	SNP	NIN	ENST00000245441	human	ensembl	69_37n	-1	known	missense	c.51	p.F17L	1.000	pfscan_EF_HAND_2	superfamily_tRNA-bd_arm,pfscan_EF_HAND_2	-	no_errors	NIN	HGNC	ENSG00000100503	185	0	0.00	124	36	22.50	-	-	-
OCIAD1	0	genome.wustl.edu	37	4	48835499	48835499	+	Splice_Site	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	4	48835499	48835499	G	A	SNP	OCIAD1	ENST00000264312	human	ensembl	69_37n	+1	known	splice_site	c.139+1	e2+1	1.000	-	-	-	no_errors	OCIAD1	HGNC	ENSG00000109180	52	0	0.00	37	10	21.28	-	-	-
ODZ4	0	genome.wustl.edu	37	11	78412585	78412585	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	78412585	78412585	C	T	SNP	ODZ4	ENST00000278550	human	ensembl	69_37n	-1	known	nonsense	c.5073	p.W1691*	1.000	tigrfam_YD	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ4	HGNC	ENSG00000149256	77	0	0.00	38	6	13.64	-	-	-
PCDH15	0	genome.wustl.edu	37	10	55582296	55582296	+	Silent	SNP	A	A	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	10	55582296	55582296	A	G	SNP	PCDH15	ENST00000320301	human	ensembl	69_37n	-1	known	silent	c.5190	p.I1730	0.009	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	164	0	0.00	107	39	26.71	-	-	-
PCDHGA12	0	genome.wustl.edu	37	5	140811927	140811927	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	5	140811927	140811927	C	T	SNP	PCDHGA12	ENST00000252085	human	ensembl	69_37n	+1	known	missense	c.1601	p.A534V	0.995	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159	74	0	0.00	69	32	31.68	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	159	0	0.00	46	393	89.52	-	-	-
POM121	0	genome.wustl.edu	37	7	72413723	72413724	+	In_Frame_Ins	INS	-	-	CTC			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	7	72413723	72413724	-	CTC	INS	POM121	ENST00000434423	human	ensembl	69_37n	+1	known	in_frame_ins	c.3191_3192	p.1065in_frame_insS	0.980:0.870	NULL	NULL	-	no_errors	POM121	HGNC	ENSG00000196313	10	0	0.00	5	3	37.50	-	-	-
PTGFR	0	genome.wustl.edu	37	1	78958991	78958991	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	78958991	78958991	A	C	SNP	PTGFR	ENST00000370757	human	ensembl	69_37n	+1	known	missense	c.563	p.Y188S	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_PglndnF_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_PglndnF_rcpt,prints_Prostanoid_rcpt,prints_Thbox_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	PTGFR	HGNC	ENSG00000122420	182	0	0.00	106	26	19.70	-	-	-
RFC1	0	genome.wustl.edu	37	4	39314522	39314522	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	4	39314522	39314522	T	C	SNP	RFC1	ENST00000381897	human	ensembl	69_37n	-1	known	missense	c.1233	p.I411M	0.105	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pirsf_DNA_replication_fac_C_lsu,pfscan_BRCT_dom	pfam_DNA_replication_fac_RFC1_C,pfam_BRCT_dom,pfam_ATPase_AAA_core,superfamily_DNA_pol3_clamp-load_cplx_C,superfamily_BRCT_dom,smart_BRCT_dom,smart_AAA+_ATPase,pirsf_DNA_replication_fac_C_lsu,pfscan_BRCT_dom	-	no_errors	RFC1	HGNC	ENSG00000035928	584	0	0.00	259	270	50.85	-	-	-
RHEB	0	genome.wustl.edu	37	7	151188068	151188068	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	7	151188068	151188068	C	T	SNP	RHEB	ENST00000262187	human	ensembl	69_37n	-1	known	missense	c.85	p.G29S	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHEB	HGNC	ENSG00000106615	176	0	0.00	81	21	20.59	-	-	-
SGK196	0	genome.wustl.edu	37	8	42977743	42977743	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	8	42977743	42977743	T	C	SNP	SGK196	ENST00000331373	human	ensembl	69_37n	+1	known	missense	c.776	p.L259P	1.000	superfamily_Kinase-like_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	SGK196	Clone_based_vega_gene	ENSG00000185900	74	0	0.00	99	21	17.50	-	-	-
SLC12A1	0	genome.wustl.edu	37	15	48580714	48580714	+	Splice_Site	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	48580714	48580714	G	A	SNP	SLC12A1	ENST00000380993	human	ensembl	69_37n	+1	known	splice_site	c.2873+1	e22+1	1.000	-	-	-	no_errors	SLC12A1	HGNC	ENSG00000074803	12	0	0.00	22	8	26.67	-	-	-
SLC35F1	0	genome.wustl.edu	37	6	118556692	118556692	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	118556692	118556692	A	C	SNP	SLC35F1	ENST00000360388	human	ensembl	69_37n	+1	known	missense	c.370	p.I124L	1.000	pfam_DUF914_euk,pfam_DMT	pfam_DUF914_euk,pfam_DMT	-	no_errors	SLC35F1	HGNC	ENSG00000196376	257	1	0.39	229	37	13.91	-	-	-
SPRTN	0	genome.wustl.edu	37	1	231488908	231488908	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	231488908	231488908	A	G	SNP	SPRTN	ENST00000295050	human	ensembl	69_37n	+1	known	missense	c.1271	p.K424R	0.639	NULL	pfam_SprT-like_domain,smart_SprT-like_domain,smart_Znf_Rad18_put	-	no_errors	SPRTN	HGNC	ENSG00000010072	141	0	0.00	153	23	13.07	-	-	-
SPTB	0	genome.wustl.edu	37	14	65216860	65216862	+	In_Frame_Del	DEL	GTT	GTT	-			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	GTT	GTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	14	65216860	65216862	GTT	-	DEL	SPTB	ENST00000389722	human	ensembl	69_37n	-1	known	in_frame_del	c.6615_6613	p.N2205in_frame_del	0.994:1.000:1.000	pirsf_Spectrin_bsu,pfam_Pleckstrin_homology,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_Pleckstrin_homology	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	27	0	0.00	12	5	29.41	-	-	-
SSH3	0	genome.wustl.edu	37	11	67077326	67077326	+	Silent	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	67077326	67077326	C	T	SNP	SSH3	ENST00000308127	human	ensembl	69_37n	+1	known	silent	c.1296	p.Y432	0.797	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH3	HGNC	ENSG00000172830	15	0	0.00	17	4	19.05	-	-	-
TBX18	0	genome.wustl.edu	37	6	85448248	85448248	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	85448248	85448248	T	G	SNP	TBX18	ENST00000369663	human	ensembl	69_37n	-1	known	missense	c.1066	p.T356P	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX18	HGNC	ENSG00000112837	354	0	0.00	244	56	18.67	-	-	-
TEX11	0	genome.wustl.edu	37	X	69773227	69773227	+	Silent	SNP	A	A	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	X	69773227	69773227	A	G	SNP	TEX11	ENST00000344304	human	ensembl	69_37n	-1	known	silent	c.2373	p.I791	0.003	NULL	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498	101	1	0.98	107	18	14.40	-	-	-
TNFSF13	0	genome.wustl.edu	37	17	7462459	7462460	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	7462459	7462460	-	G	INS	TNFSF13	ENST00000338784	human	ensembl	69_37n	+1	known	frame_shift_ins	c.103_104	p.A37fs	1.000:1.000	NULL	pfam_TNF,superfamily_Tumour_necrosis_fac-like,smart_TNF,pfscan_TNF	-	no_errors	TNFSF13	HGNC	ENSG00000161955	15	0	0.00	25	4	13.79	-	-	-
TP53	0	genome.wustl.edu	37	17	7578222	7578223	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	7578222	7578223	TC	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_del	c.627_626	p.R209fs	0.000:0.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	72	0	0.00	42	54	55.67	-	-	-
TPR	0	genome.wustl.edu	37	1	186315302	186315302	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	186315302	186315302	C	G	SNP	TPR	ENST00000367478	human	ensembl	69_37n	-1	known	missense	c.3061	p.D1021H	1.000	superfamily_Prefoldin	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410	171	0	0.00	192	27	12.33	-	-	-
TSPO2	0	genome.wustl.edu	37	6	41011722	41011722	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	41011722	41011722	C	T	SNP	TSPO2	ENST00000373161	human	ensembl	69_37n	+1	known	missense	c.359	p.T120I	0.007	pfam_TspO_MBR,pirsf_TspO_MBR	pfam_TspO_MBR,pirsf_TspO_MBR	-	no_errors	TSPO2	HGNC	ENSG00000112212	46	0	0.00	10	14	58.33	-	-	-
TTN	0	genome.wustl.edu	37	2	179408032	179408032	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	2	179408032	179408032	C	T	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	nonsense	c.88964	p.W29655*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	239	0	0.00	216	53	19.70	-	-	-
TTN	0	genome.wustl.edu	37	2	179442793	179442793	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	2	179442793	179442793	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	nonsense	c.60745	p.R20249*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	137	0	0.00	100	33	24.81	-	-	-
TXLNB	0	genome.wustl.edu	37	6	139563701	139563701	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	139563701	139563701	G	A	SNP	TXLNB	ENST00000358430	human	ensembl	69_37n	-1	known	missense	c.2017	p.R673C	0.016	NULL	pfam_Taxilin	-	no_errors	TXLNB	HGNC	ENSG00000164440	48	0	0.00	21	8	27.59	-	-	-
U2SURP	0	genome.wustl.edu	37	3	142738838	142738838	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	3	142738838	142738838	A	-	DEL	U2SURP	ENST00000319822	human	ensembl	69_37n	+1	known	frame_shift_del	c.598	p.S202fs	1.000	NULL	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_RNA_polymerase_II_lsu_CTD,pfscan_Surp,pfscan_RRM_dom	-	no_errors	U2SURP	HGNC	ENSG00000163714	22	0	0.00	12	2	14.29	-	-	-
UMODL1	0	genome.wustl.edu	37	21	43508466	43508466	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	21	43508466	43508466	C	T	SNP	UMODL1	ENST00000400421	human	ensembl	69_37n	+1	known	missense	c.173	p.T58M	0.139	NULL	pfam_EGF-like_Ca-bd,superfamily_Fibronectin_type3	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	UMODL1	HGNC	ENSG00000177398	17	0	0.00	10	4	25.00	-	-	-
UPF2	0	genome.wustl.edu	37	10	12071392	12071392	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	10	12071392	12071392	G	C	SNP	UPF2	ENST00000356352	human	ensembl	69_37n	-1	known	nonsense	c.497	p.S166*	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461	239	1	0.42	249	62	19.94	-	-	-
UPP1	0	genome.wustl.edu	37	7	48147911	48147911	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	7	48147911	48147911	G	A	SNP	UPP1	ENST00000331803	human	ensembl	69_37n	+1	known	missense	c.890	p.R297Q	0.938	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	-	no_errors	UPP1	HGNC	ENSG00000183696	50	0	0.00	63	23	26.74	-	-	-
USO1	0	genome.wustl.edu	37	4	76703933	76703933	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	4	76703933	76703933	G	A	SNP	USO1	ENST00000538159	human	ensembl	69_37n	+1	known	missense	c.783	p.M261I	1.000	superfamily_ARM-type_fold	pfam_Vesicle_Uso1_P115_head,pfam_Uso1_p115_C,superfamily_ARM-type_fold,superfamily_t-SNARE	-	no_errors	USO1	HGNC	ENSG00000138768	64	0	0.00	66	76	53.52	-	-	-
ZNF831	0	genome.wustl.edu	37	20	57769143	57769143	+	Silent	SNP	G	G	A			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	20	57769143	57769143	G	A	SNP	ZNF831	ENST00000371030	human	ensembl	69_37n	+1	novel	silent	c.3069	p.G1023	0.011	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	15	0	0.00	17	5	22.73	-	-	-
