Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANK1	0	genome.wustl.edu	37	8	41525809	41525809	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	8	41525809	41525809	C	T	SNP	ANK1	ENST00000520299	human	ensembl	69_37n	-1	putative	missense	c.2848	p.E950K	0.000	NULL	pfam_ZU5,pfam_Ankyrin_rpt,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ANK1	HGNC	ENSG00000029534	190	0	0.00	132	61	31.61	-	-	-
ATAD3B	0	genome.wustl.edu	37	1	1430987	1430987	+	Silent	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	1430987	1430987	C	T	SNP	ATAD3B	ENST00000308647	human	ensembl	69_37n	+1	known	silent	c.1737	p.R579	0.000	NULL	pfam_DUF3523,pfam_ATPase_AAA_core,smart_AAA+_ATPase	-	no_errors	ATAD3B	HGNC	ENSG00000160072	22	0	0.00	3	5	62.50	-	-	-
BHMT2	0	genome.wustl.edu	37	5	78379147	78379147	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	5	78379147	78379147	C	T	SNP	BHMT2	ENST00000255192	human	ensembl	69_37n	+1	known	missense	c.731	p.A244V	0.998	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_Betaine-hCys_S-MeTrfase_BHMT,pfscan_S_MeTrfase	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_Betaine-hCys_S-MeTrfase_BHMT,pfscan_S_MeTrfase	-	no_errors	BHMT2	HGNC	ENSG00000132840	112	0	0.00	154	21	12.00	-	-	-
CDH24	0	genome.wustl.edu	37	14	23523784	23523785	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	14	23523784	23523785	-	C	INS	CDH24	ENST00000267383	human	ensembl	69_37n	-1	known	frame_shift_ins	c.715_714	p.L238fs	1.000:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH24	HGNC	ENSG00000139880	25	0	0.00	7	4	36.36	-	-	-
CEP95	0	genome.wustl.edu	37	17	62533802	62533802	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	17	62533802	62533802	G	A	SNP	CEP95	ENST00000556440	human	ensembl	69_37n	+1	known	missense	c.2371	p.D791N	1.000	NULL	superfamily_CH-domain	-	no_errors	CEP95	HGNC	ENSG00000258890	113	0	0.00	106	13	10.83	-	-	-
CERCAM	0	genome.wustl.edu	37	9	131186755	131186755	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	9	131186755	131186755	G	T	SNP	CERCAM	ENST00000372838	human	ensembl	69_37n	+1	known	missense	c.628	p.V210F	1.000	NULL	pfam_Glyco_trans_25	-	no_errors	CERCAM	HGNC	ENSG00000167123	34	0	0.00	2	9	81.82	-	-	-
CLDN8	0	genome.wustl.edu	37	21	31587665	31587665	+	Silent	SNP	A	A	G			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	21	31587665	31587665	A	G	SNP	CLDN8	ENST00000286809	human	ensembl	69_37n	-1	known	silent	c.579	p.S193	0.000	prints_Claudin8	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin8,prints_Claudin14	-	no_errors	CLDN8	HGNC	ENSG00000156284	155	0	0.00	125	41	24.70	-	-	-
CRISPLD1	0	genome.wustl.edu	37	8	75927084	75927084	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	8	75927084	75927084	C	T	SNP	CRISPLD1	ENST00000262207	human	ensembl	69_37n	+1	known	missense	c.664	p.R222W	0.873	NULL	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005	31	0	0.00	17	25	59.52	-	-	-
CYR61	0	genome.wustl.edu	37	1	86047823	86047823	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	86047823	86047823	G	A	SNP	CYR61	ENST00000451137	human	ensembl	69_37n	+1	known	missense	c.490	p.D164N	1.000	pirsf_IGFBP_CNN,pfscan_VWF_C	pfam_Cys_knot,pfam_IGFBP-like,pfam_VWF_C,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	CYR61	HGNC	ENSG00000142871	121	0	0.00	15	17	53.12	-	-	-
DCHS2	0	genome.wustl.edu	37	4	155253827	155253827	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	4	155253827	155253827	A	T	SNP	DCHS2	ENST00000357232	human	ensembl	69_37n	-1	known	missense	c.2036	p.I679N	0.003	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	176	0	0.00	170	50	22.73	-	-	-
DENND5A	0	genome.wustl.edu	37	11	9167307	9167307	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	11	9167307	9167307	G	A	SNP	DENND5A	ENST00000531747	human	ensembl	69_37n	-1	known	missense	c.149	p.S50L	1.000	NULL	pfam_Run	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DENND5A	HGNC	ENSG00000184014	335	1	0.30	238	129	35.15	-	-	-
FAM124B	0	genome.wustl.edu	37	2	225266148	225266148	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	2	225266148	225266148	T	C	SNP	FAM124B	ENST00000409685	human	ensembl	69_37n	-1	known	missense	c.338	p.N113S	0.001	NULL	NULL	-	no_errors	FAM124B	HGNC	ENSG00000124019	78	0	0.00	62	16	20.51	-	-	-
FLNB	0	genome.wustl.edu	37	3	58140575	58140576	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	3	58140575	58140576	-	G	INS	FLNB	ENST00000295956	human	ensembl	69_37n	+1	known	frame_shift_ins	c.6692_6693	p.S2234fs	1.000:1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068	38	0	0.00	26	14	35.00	-	-	-
GSPT2	0	genome.wustl.edu	37	X	51488498	51488498	+	Silent	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	X	51488498	51488498	C	T	SNP	GSPT2	ENST00000340438	human	ensembl	69_37n	+1	known	silent	c.1776	p.I592	1.000	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd	-	no_errors	GSPT2	HGNC	ENSG00000189369	212	0	0.00	111	32	22.38	-	-	-
IGSF3	0	genome.wustl.edu	37	1	117146250	117146250	+	Silent	SNP	A	A	G			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	117146250	117146250	A	G	SNP	IGSF3	ENST00000318837	human	ensembl	69_37n	-1	known	silent	c.1680	p.A560	0.921	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	IGSF3	HGNC	ENSG00000143061	146	0	0.00	78	27	25.71	-	-	-
ITPKA	0	genome.wustl.edu	37	15	41794697	41794697	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	15	41794697	41794697	T	C	SNP	ITPKA	ENST00000260386	human	ensembl	69_37n	+1	known	missense	c.1106	p.V369A	1.000	pfam_IPK	pfam_IPK	-	no_errors	ITPKA	HGNC	ENSG00000137825	11	0	0.00	5	37	88.10	-	-	-
KLHL8	0	genome.wustl.edu	37	4	88104522	88104522	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	4	88104522	88104522	G	A	SNP	KLHL8	ENST00000273963	human	ensembl	69_37n	-1	known	missense	c.785	p.P262L	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_Kelch_2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL8	HGNC	ENSG00000145332	125	0	0.00	133	54	28.88	-	-	-
LAMA2	0	genome.wustl.edu	37	6	129712680	129712680	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	6	129712680	129712680	C	T	SNP	LAMA2	ENST00000421865	human	ensembl	69_37n	+1	known	nonsense	c.5116	p.R1706*	0.991	pfam_Laminin_I	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569	362	0	0.00	124	146	54.07	-	-	-
LONP2	0	genome.wustl.edu	37	16	48303987	48303987	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	16	48303987	48303987	A	T	SNP	LONP2	ENST00000285737	human	ensembl	69_37n	+1	known	missense	c.1043	p.K348I	1.000	tigrfam_Pept_S16_lon	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Pept_S16_lon	-	no_errors	LONP2	HGNC	ENSG00000102910	174	0	0.00	65	87	57.24	-	-	-
MAGEE1	0	genome.wustl.edu	37	X	75648789	75648789	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	X	75648789	75648789	G	-	DEL	MAGEE1	ENST00000361470	human	ensembl	69_37n	+1	known	frame_shift_del	c.466	p.A156fs	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	17	0	0.00	6	6	40.00	-	-	-
MAGEE1	0	genome.wustl.edu	37	X	75648792	75648793	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	X	75648792	75648793	-	G	INS	MAGEE1	ENST00000361470	human	ensembl	69_37n	+1	known	frame_shift_ins	c.469_470	p.S157fs	0.000:0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	17	0	0.00	10	4	28.57	-	-	-
MAML2	0	genome.wustl.edu	37	11	95825407	95825407	+	Silent	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	11	95825407	95825407	C	T	SNP	MAML2	ENST00000440572	human	ensembl	69_37n	-1	known	silent	c.1788	p.Q596	0.003	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384	10	0	0.00	15	8	34.78	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56160594	56160595	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	5	56160594	56160595	-	C	INS	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.868_869	p.S292fs	1.000:1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	151	0	0.00	116	63	35.20	-	-	-
MED7	0	genome.wustl.edu	37	5	156566070	156566070	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	5	156566070	156566070	C	A	SNP	MED7	ENST00000286317	human	ensembl	69_37n	-1	known	nonsense	c.373	p.E125*	1.000	pfam_Mediatior_Med7	pfam_Mediatior_Med7	-	no_errors	MED7	HGNC	ENSG00000155868	192	0	0.00	164	74	30.83	-	-	-
MYOM3	0	genome.wustl.edu	37	1	24432477	24432477	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	24432477	24432477	C	T	SNP	MYOM3	ENST00000330966	human	ensembl	69_37n	-1	known	missense	c.496	p.V166I	0.997	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYOM3	HGNC	ENSG00000142661	18	0	0.00	4	5	55.56	-	-	-
OPA1	0	genome.wustl.edu	37	3	193365903	193365903	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	3	193365903	193365903	C	T	SNP	OPA1	ENST00000361510	human	ensembl	69_37n	+1	known	missense	c.1915	p.R639C	1.000	NULL	pfam_Dynamin_GTPase,smart_Dynamin_GTPase,prints_Dynamin	-	no_errors	OPA1	HGNC	ENSG00000198836	93	0	0.00	81	26	24.30	-	-	-
OTUD7B	0	genome.wustl.edu	37	1	149931697	149931697	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	149931697	149931697	C	T	SNP	OTUD7B	ENST00000369135	human	ensembl	69_37n	-1	known	missense	c.751	p.E251K	1.000	pfam_OTU,pfscan_OTU	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7B	HGNC	ENSG00000163113	221	0	0.00	306	185	37.68	-	-	-
PDK4	0	genome.wustl.edu	37	7	95216383	95216383	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	7	95216383	95216383	T	A	SNP	PDK4	ENST00000005178	human	ensembl	69_37n	-1	known	missense	c.1034	p.Q345L	1.000	pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,smart_ATPase-like_ATP-bd,pfscan_Sig_transdc_His_kinase_core	pfam_BCDHK/PDK_N,pfam_ATPase-like_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_ATPase-like_ATP-bd,smart_ATPase-like_ATP-bd,pfscan_Sig_transdc_His_kinase_core	-	no_errors	PDK4	HGNC	ENSG00000004799	33	0	0.00	33	10	23.26	-	-	-
PNLIPRP1	0	genome.wustl.edu	37	10	118368603	118368603	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	10	118368603	118368603	C	T	SNP	PNLIPRP1	ENST00000358834	human	ensembl	69_37n	+1	known	missense	c.1379	p.T460M	0.005	pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pirsf_Lipoprotein_lipase_LIPH,pfscan_LipOase_LH2,prints_Lipase_panc	pfam_Lipase_N,pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pirsf_Lipoprotein_lipase_LIPH,pfscan_LipOase_LH2,prints_Lipase_panc,prints_Lipase	-	no_errors	PNLIPRP1	HGNC	ENSG00000187021	43	0	0.00	29	10	25.64	-	-	-
SEC16B	0	genome.wustl.edu	37	1	177905472	177905472	+	Silent	SNP	G	G	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	177905472	177905472	G	A	SNP	SEC16B	ENST00000308284	human	ensembl	69_37n	-1	known	silent	c.2532	p.S844	0.003	NULL	NULL	-	no_errors	SEC16B	Clone_based_vega_gene	ENSG00000120341	35	0	0.00	22	11	33.33	-	-	-
SEMA5B	0	genome.wustl.edu	37	3	122634434	122634434	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	3	122634434	122634434	G	A	SNP	SEMA5B	ENST00000451055	human	ensembl	69_37n	-1	known	missense	c.2003	p.P668L	0.993	superfamily_Thrombospondin_1_rpt	pfam_Semaphorin/CD100_Ag,pfam_Thrombospondin_1_rpt,superfamily_Semaphorin/CD100_Ag,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Thrombospondin_1_rpt,pfscan_Semaphorin/CD100_Ag,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684	62	0	0.00	9	14	60.87	-	-	-
SYCP2	0	genome.wustl.edu	37	20	58467628	58467628	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	20	58467628	58467628	T	C	SNP	SYCP2	ENST00000357552	human	ensembl	69_37n	-1	known	missense	c.1922	p.N641S	0.007	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074	236	0	0.00	286	43	13.07	-	-	-
SZRD1	0	genome.wustl.edu	37	1	16719821	16719821	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	16719821	16719821	C	T	SNP	SZRD1	ENST00000375590	human	ensembl	69_37n	+1	known	missense	c.140	p.T47I	1.000	NULL	NULL	-	no_errors	SZRD1	HGNC	ENSG00000055070	82	0	0.00	70	21	22.83	-	-	-
TCF4	0	genome.wustl.edu	37	18	52928697	52928697	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	18	52928697	52928697	C	T	SNP	TCF4	ENST00000570146	human	ensembl	69_37n	-1	putative	missense	c.254	p.R85Q	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TCF4	HGNC	ENSG00000196628	636	0	0.00	398	97	19.60	-	-	-
WNT2	0	genome.wustl.edu	37	7	116918218	116918218	+	Silent	SNP	G	G	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	7	116918218	116918218	G	A	SNP	WNT2	ENST00000265441	human	ensembl	69_37n	-1	known	silent	c.1074	p.T358	0.000	NULL	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt2	-	no_errors	WNT2	HGNC	ENSG00000105989	49	0	0.00	38	25	39.06	-	-	-
ZCCHC11	0	genome.wustl.edu	37	1	52933940	52933940	+	Splice_Site	SNP	C	C	A			TCGA-A8-A090-01A-11W-A019-09	TCGA-A8-A090-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	783e4c13-8fa5-4591-9453-1e59ca167e10	26d576f7-f43a-4477-be3b-efd4337b48d7	1	52933940	52933940	C	A	SNP	ZCCHC11	ENST00000257177	human	ensembl	69_37n	-1	known	splice_site	c.2879-1	e14-1	1.000	-	-	-	no_errors	ZCCHC11	HGNC	ENSG00000134744	76	0	0.00	64	38	37.25	-	-	-
