Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABHD10	0	genome.wustl.edu	37	3	111710568	111710568	+	Nonstop_Mutation	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	3	111710568	111710568	G	T	SNP	ABHD10	ENST00000273359	human	ensembl	69_37n	+1	known	nonstop	c.921	p.*307Y	0.027	NULL	pfam_AB_hydrolase_1,pfam_Peptidase_S9	-	no_errors	ABHD10	HGNC	ENSG00000144827	30	0	0.00	21	3	12.50	-	-	-
ARMC1	0	genome.wustl.edu	37	8	66539544	66539544	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	8	66539544	66539544	G	T	SNP	ARMC1	ENST00000276569	human	ensembl	69_37n	-1	known	missense	c.90	p.N30K	0.993	pfam_Armadillo,superfamily_ARM-type_fold,pirsf_UCP013899_metal-bd	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_HeavyMe-assoc_HMA,pirsf_UCP013899_metal-bd	-	no_errors	ARMC1	HGNC	ENSG00000104442	43	0	0.00	19	3	13.64	-	-	-
ASPM	0	genome.wustl.edu	37	1	197091059	197091059	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	1	197091059	197091059	G	C	SNP	ASPM	ENST00000367409	human	ensembl	69_37n	-1	known	missense	c.3856	p.L1286V	0.004	superfamily_ARM-type_fold,smart_IQ_motif_EF-hand-BS	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279	59	0	0.00	41	34	45.33	-	-	-
ATP1A2	0	genome.wustl.edu	37	1	160098479	160098479	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	1	160098479	160098479	A	G	SNP	ATP1A2	ENST00000361216	human	ensembl	69_37n	+1	known	missense	c.1055	p.K352R	1.000	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A2	HGNC	ENSG00000018625	41	0	0.00	32	7	17.95	-	-	-
CECR6	0	genome.wustl.edu	37	22	17601391	17601393	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	22	17601391	17601393	CAG	-	DEL	CECR6	ENST00000331437	human	ensembl	69_37n	-1	known	in_frame_del	c.627_625	p.L209in_frame_del	1.000:1.000:0.997	NULL	NULL	-	no_errors	CECR6	HGNC	ENSG00000183307	24	0	0.00	5	2	28.57	-	-	-
DCAF4L1	0	genome.wustl.edu	37	4	41984628	41984628	+	Silent	SNP	G	G	A			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	4	41984628	41984628	G	A	SNP	DCAF4L1	ENST00000333141	human	ensembl	69_37n	+1	known	silent	c.819	p.V273	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC	ENSG00000182308	21	0	0.00	33	7	17.50	-	-	-
DOCK5	0	genome.wustl.edu	37	8	25101241	25101241	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	8	25101241	25101241	G	T	SNP	DOCK5	ENST00000276440	human	ensembl	69_37n	+1	known	missense	c.95	p.G32V	0.990	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_DOCK,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK5	HGNC	ENSG00000147459	45	0	0.00	32	4	11.11	-	-	-
EFHA2	0	genome.wustl.edu	37	8	16944534	16944534	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	8	16944534	16944534	G	T	SNP	EFHA2	ENST00000318063	human	ensembl	69_37n	+1	known	missense	c.839	p.R280L	0.998	NULL	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	EFHA2	HGNC	ENSG00000155970	42	0	0.00	21	4	16.00	-	-	-
FBXO11	0	genome.wustl.edu	37	2	48050473	48050473	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	2	48050473	48050473	G	T	SNP	FBXO11	ENST00000403359	human	ensembl	69_37n	-1	known	missense	c.1425	p.H475Q	1.000	superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom_cyclin-like,smart_Carb-bd_sugar_hydrolysis-dom,smart_PbH1	pfam_Znf_N-recognin,pfam_F-box_dom_cyclin-like,superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_PbH1,smart_Carb-bd_sugar_hydrolysis-dom,smart_Znf_N-recognin_met,pfscan_F-box_dom_cyclin-like,pfscan_Znf_N-recognin,tigrfam_Para_beta_helix_rpt-2	-	no_errors	FBXO11	HGNC	ENSG00000138081	25	0	0.00	17	3	15.00	-	-	-
GUCY2F	0	genome.wustl.edu	37	X	108718457	108718457	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	X	108718457	108718457	G	T	SNP	GUCY2F	ENST00000218006	human	ensembl	69_37n	-1	known	missense	c.709	p.H237N	0.920	pfam_ANF_lig-bd_rcpt	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Haem_no_assoc-bd,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2F	HGNC	ENSG00000101890	92	0	0.00	66	11	14.29	-	-	-
HSP90AB1	0	genome.wustl.edu	37	6	44221293	44221293	+	Silent	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	6	44221293	44221293	C	T	SNP	HSP90AB1	ENST00000353801	human	ensembl	69_37n	+1	known	silent	c.2133	p.L711	0.645	pfam_Hsp90,pirsf_Hsp90	pfam_Hsp90,pfam_ATPase-like_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ATPase-like_ATP-bd,smart_ATPase-like_ATP-bd,pirsf_Hsp90,prints_Hsp90_N	-	no_errors	HSP90AB1	HGNC	ENSG00000096384	35	0	0.00	35	5	12.50	-	-	-
IGDCC3	0	genome.wustl.edu	37	15	65623553	65623553	+	Splice_Site	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	15	65623553	65623553	C	T	SNP	IGDCC3	ENST00000327987	human	ensembl	69_37n	-1	known	splice_site	c.1397-1	e9-1	1.000	-	-	-	no_errors	IGDCC3	HGNC	ENSG00000174498	19	0	0.00	14	8	36.36	-	-	-
KLHDC4	0	genome.wustl.edu	37	16	87734456	87734456	+	RNA	SNP	G	G	C			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	16	87734456	87734456	G	C	SNP	KLHDC4	ENST00000568346	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	KLHDC4	HGNC	ENSG00000104731	10	0	0.00	4	5	55.56	-	-	-
MC1R	0	genome.wustl.edu	37	16	89981024	89981025	+	RNA	DEL	CC	CC	-			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	16	89981024	89981025	CC	-	DEL	MC1R	ENST00000539976	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.902:0.902	-	-	-	no_errors	MC1R	HGNC	ENSG00000258839	8	0	0.00	4	2	33.33	-	-	-
MDN1	0	genome.wustl.edu	37	6	90380734	90380734	+	Silent	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	6	90380734	90380734	G	T	SNP	MDN1	ENST00000369393	human	ensembl	69_37n	-1	known	silent	c.13860	p.L4620	0.776	superfamily_ARM-type_fold,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	27	0	0.00	32	4	11.11	-	-	-
MKNK1	0	genome.wustl.edu	37	1	47037769	47037769	+	Silent	SNP	G	G	A			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	1	47037769	47037769	G	A	SNP	MKNK1	ENST00000371946	human	ensembl	69_37n	-1	known	silent	c.459	p.D153	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MKNK1	HGNC	ENSG00000079277	32	0	0.00	32	8	20.00	-	-	-
MUM1L1	0	genome.wustl.edu	37	X	105450668	105450668	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	X	105450668	105450668	C	T	SNP	MUM1L1	ENST00000337685	human	ensembl	69_37n	+1	known	nonsense	c.1243	p.R415*	0.990	NULL	superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	MUM1L1	HGNC	ENSG00000157502	45	0	0.00	27	8	22.86	-	-	-
NAV1	0	genome.wustl.edu	37	1	201709164	201709164	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	1	201709164	201709164	C	T	SNP	NAV1	ENST00000367295	human	ensembl	69_37n	+1	novel	missense	c.13	p.P5S	1.000	NULL	smart_AAA+_ATPase	-	no_errors	NAV1	HGNC	ENSG00000134369	44	0	0.00	21	21	50.00	-	-	-
OR1L6	0	genome.wustl.edu	37	9	125512365	125512365	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	9	125512365	125512365	C	G	SNP	OR1L6	ENST00000373684	human	ensembl	69_37n	+1	known	missense	c.347	p.P116R	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR1L6	HGNC	ENSG00000171459	73	0	0.00	46	7	13.21	-	-	-
PEAK1	0	genome.wustl.edu	37	15	77471618	77471618	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	15	77471618	77471618	T	C	SNP	PEAK1	ENST00000312493	human	ensembl	69_37n	-1	known	missense	c.2651	p.N884S	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	PEAK1	Clone_based_vega_gene	ENSG00000173517	27	0	0.00	20	4	16.67	-	-	-
PTEN	0	genome.wustl.edu	37	10	89624296	89624296	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	10	89624296	89624296	G	A	SNP	PTEN	ENST00000371953	human	ensembl	69_37n	+1	known	missense	c.70	p.D24N	1.000	smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-specificity_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	37	0	0.00	20	9	31.03	-	-	-
RNPC3	0	genome.wustl.edu	37	1	104076467	104076467	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	1	104076467	104076467	A	-	DEL	RNPC3	ENST00000423855	human	ensembl	69_37n	+1	known	frame_shift_del	c.347	p.K119fs	0.784	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RNPC3	HGNC	ENSG00000185946	18	0	0.00	13	5	27.78	-	-	-
RPS4XP21	0	genome.wustl.edu	37	19	34583700	34583700	+	Silent	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	19	34583700	34583700	C	T	SNP	RPS4XP21	ENST00000469064	human	ensembl	69_37n	-1	putative	silent	c.549	p.K183	1.000	pirsf_Ribosomal_S4e	pfam_Ribosomal_S4e_central,pfam_Ribosomal_S4e_N,pirsf_Ribosomal_S4e	-	no_errors	RPS4XP21	HGNC	ENSG00000186008	34	0	0.00	24	3	11.11	-	-	-
SF3B1	0	genome.wustl.edu	37	2	198266834	198266834	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	2	198266834	198266834	T	C	SNP	SF3B1	ENST00000335508	human	ensembl	69_37n	-1	known	missense	c.2098	p.K700E	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524	24	0	0.00	15	4	21.05	-	-	-
SLC6A2	0	genome.wustl.edu	37	16	55725894	55725894	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	16	55725894	55725894	C	T	SNP	SLC6A2	ENST00000219833	human	ensembl	69_37n	+1	known	missense	c.848	p.T283M	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_noradrenaline	-	no_errors	SLC6A2	HGNC	ENSG00000103546	51	0	0.00	23	7	23.33	-	-	-
SPATA13	0	genome.wustl.edu	37	13	24868916	24868916	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	13	24868916	24868916	G	T	SNP	SPATA13	ENST00000382141	human	ensembl	69_37n	+1	known	nonsense	c.2866	p.E956*	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SPATA13	HGNC	ENSG00000182957	27	0	0.00	14	3	17.65	-	-	-
SPTAN1	0	genome.wustl.edu	37	9	131344200	131344200	+	RNA	SNP	A	A	G			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	9	131344200	131344200	A	G	SNP	SPTAN1	ENST00000472211	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPTAN1	HGNC	ENSG00000197694	30	0	0.00	19	9	32.14	-	-	-
TET1	0	genome.wustl.edu	37	10	70451416	70451416	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	10	70451416	70451416	C	T	SNP	TET1	ENST00000373644	human	ensembl	69_37n	+1	known	nonsense	c.6256	p.Q2086*	0.000	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	27	0	0.00	17	3	15.00	-	-	-
VWA8	0	genome.wustl.edu	37	13	42273247	42273247	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	13	42273247	42273247	C	T	SNP	VWA8	ENST00000379310	human	ensembl	69_37n	-1	known	missense	c.3524	p.G1175E	1.000	NULL	pfam_ATPase_dyneun-rel_AAA,pfam_VWF_A,smart_AAA+_ATPase,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA8	HGNC	ENSG00000102763	21	0	0.00	22	5	18.52	-	-	-
ZCCHC5	0	genome.wustl.edu	37	X	77913761	77913761	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AR-A1AM-01A-41D-A228-09	TCGA-AR-A1AM-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	012e1ff3-7ed3-4dee-ae3d-44a8050d774e	23e838ec-7c27-4869-975d-e3b6f25ace19	X	77913761	77913761	G	A	SNP	ZCCHC5	ENST00000321110	human	ensembl	69_37n	-1	known	nonsense	c.157	p.R53*	0.156	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC5	HGNC	ENSG00000179300	54	0	0.00	45	13	22.41	-	-	-
