Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AMOT	0	genome.wustl.edu	37	X	112065720	112065720	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	X	112065720	112065720	G	T	SNP	AMOT	ENST00000371959	human	ensembl	69_37n	-1	known	missense	c.635	p.T212K	0.998	NULL	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016	659	2	0.30	532	157	22.79	-	-	-
BAZ2B	0	genome.wustl.edu	37	2	160181323	160181323	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	2	160181323	160181323	G	A	SNP	BAZ2B	ENST00000392783	human	ensembl	69_37n	-1	known	nonsense	c.6352	p.Q2118*	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_integrase-typ,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636	86	0	0.00	108	23	17.56	-	-	-
BRF1	0	genome.wustl.edu	37	14	105683986	105683986	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	14	105683986	105683986	C	T	SNP	BRF1	ENST00000546474	human	ensembl	69_37n	-1	known	missense	c.1667	p.R556K	0.024	NULL	pfam_TFIIB_cyclin,pfam_BRF1_TBP-bd,pfam_Znf_TFIIB,superfamily_Cyclin-like,smart_Cyclin-like,prints_TFIIB,pfscan_Znf_TFIIB	-	no_errors	BRF1	HGNC	ENSG00000185024	81	0	0.00	38	20	34.48	-	-	-
BZRAP1	0	genome.wustl.edu	37	17	56386383	56386384	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	17	56386383	56386384	-	T	INS	BZRAP1	ENST00000355701	human	ensembl	69_37n	-1	known	frame_shift_ins	c.4250_4249	p.S1417fs	0.000:0.001	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	19	0	0.00	7	2	22.22	-	-	-
C1orf94	0	genome.wustl.edu	37	1	34663500	34663500	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	34663500	34663500	G	A	SNP	C1orf94	ENST00000488417	human	ensembl	69_37n	+1	known	missense	c.995	p.R332K	0.994	NULL	NULL	-	no_errors	C1orf94	HGNC	ENSG00000142698	56	0	0.00	39	14	26.42	-	-	-
CALB2	0	genome.wustl.edu	37	16	71417313	71417313	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	16	71417313	71417313	A	T	SNP	CALB2	ENST00000302628	human	ensembl	69_37n	+1	known	missense	c.443	p.D148V	1.000	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CALB2	HGNC	ENSG00000172137	232	0	0.00	116	56	32.18	-	-	-
CENPF	0	genome.wustl.edu	37	1	214803928	214803928	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	214803928	214803928	C	A	SNP	CENPF	ENST00000366955	human	ensembl	69_37n	+1	known	missense	c.1246	p.Q416K	0.996	NULL	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_Centromere_CenpF_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724	228	0	0.00	263	71	21.26	-	-	-
CLCN3	0	genome.wustl.edu	37	4	170557240	170557240	+	Splice_Site	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	4	170557240	170557240	G	T	SNP	CLCN3	ENST00000347613	human	ensembl	69_37n	+1	known	splice_site	c.160+1	e1+1	1.000	-	-	-	no_errors	CLCN3	HGNC	ENSG00000109572	204	0	0.00	125	50	28.57	-	-	-
CLDND1	0	genome.wustl.edu	37	3	98217028	98217028	+	Splice_Site	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	3	98217028	98217028	C	T	SNP	CLDND1	ENST00000502288	human	ensembl	69_37n	-1	putative	splice_site	c.257-1	e4-1	0.994	-	-	-	no_errors	CLDND1	HGNC	ENSG00000080822	546	1	0.18	486	176	26.59	-	-	-
CLSTN2	0	genome.wustl.edu	37	3	140122483	140122483	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	3	140122483	140122483	C	T	SNP	CLSTN2	ENST00000458420	human	ensembl	69_37n	+1	known	missense	c.245	p.A82V	0.981	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN2	HGNC	ENSG00000158258	155	0	0.00	126	48	27.59	-	-	-
CMTM7	0	genome.wustl.edu	37	3	32490993	32490993	+	Silent	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	3	32490993	32490993	C	T	SNP	CMTM7	ENST00000334983	human	ensembl	69_37n	+1	known	silent	c.381	p.S127	1.000	pfam_MARVEL-like_dom	pfam_MARVEL-like_dom	-	no_errors	CMTM7	HGNC	ENSG00000153551	352	0	0.00	313	80	20.30	-	-	-
COL6A6	0	genome.wustl.edu	37	3	130300437	130300437	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	3	130300437	130300437	G	T	SNP	COL6A6	ENST00000358511	human	ensembl	69_37n	+1	known	missense	c.3580	p.V1194F	0.984	smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	383	0	0.00	387	110	22.13	-	-	-
CTNNA3	0	genome.wustl.edu	37	10	67726393	67726394	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	10	67726393	67726394	-	T	INS	CTNNA3	ENST00000373744	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2377_2376	p.G792fs	1.000:0.931	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA3	HGNC	ENSG00000183230	209	0	0.00	204	59	22.43	-	-	-
CTNNA3	0	genome.wustl.edu	37	10	67726396	67726396	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	10	67726396	67726396	G	T	SNP	CTNNA3	ENST00000373744	human	ensembl	69_37n	-1	known	missense	c.2374	p.L792M	0.999	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA3	HGNC	ENSG00000183230	215	0	0.00	207	64	23.62	-	-	-
DHRS2	0	genome.wustl.edu	37	14	24113663	24113663	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	14	24113663	24113663	A	G	SNP	DHRS2	ENST00000344777	human	ensembl	69_37n	+1	known	missense	c.586	p.T196A	0.999	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	DHRS2	HGNC	ENSG00000100867	111	0	0.00	37	26	41.27	-	-	-
ENO3	0	genome.wustl.edu	37	17	4857133	4857133	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	17	4857133	4857133	C	T	SNP	ENO3	ENST00000323997	human	ensembl	69_37n	+1	known	missense	c.437	p.P146L	1.000	pfam_Enolase_C,pirsf_Enolase,tigrfam_Enolase	pfam_Enolase_C,pfam_Enolase_N,pfam_MeAsp_NH4-lyase_C,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	-	no_errors	ENO3	HGNC	ENSG00000108515	158	0	0.00	77	45	36.89	-	-	-
EVPL	0	genome.wustl.edu	37	17	74017827	74017827	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	17	74017827	74017827	C	A	SNP	EVPL	ENST00000301607	human	ensembl	69_37n	-1	known	missense	c.843	p.Q281H	0.890	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,superfamily_Ferritin/RR-like,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880	25	0	0.00	12	9	42.86	-	-	-
FLG	0	genome.wustl.edu	37	1	152286025	152286025	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	152286025	152286025	C	G	SNP	FLG	ENST00000368799	human	ensembl	69_37n	-1	known	missense	c.1337	p.R446T	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	350	0	0.00	624	76	10.86	-	-	-
FSHR	0	genome.wustl.edu	37	2	49190072	49190072	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	2	49190072	49190072	T	C	SNP	FSHR	ENST00000406846	human	ensembl	69_37n	-1	known	missense	c.1888	p.T630A	1.000	prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_GnHR_TM,pfam_LRR-contain_N,pfam_Leu-rich_rpt,smart_LRR-contain_N,pfscan_GPCR_Rhodpsn_supfam,prints_FSH_rcpt,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	FSHR	HGNC	ENSG00000170820	315	0	0.00	259	97	27.17	-	-	-
GNPAT	0	genome.wustl.edu	37	1	231403518	231403518	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	231403518	231403518	T	G	SNP	GNPAT	ENST00000366647	human	ensembl	69_37n	+1	known	missense	c.1148	p.L383W	1.000	NULL	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	GNPAT	HGNC	ENSG00000116906	153	0	0.00	193	40	17.17	-	-	-
HDX	0	genome.wustl.edu	37	X	83581199	83581199	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	X	83581199	83581199	T	G	SNP	HDX	ENST00000297977	human	ensembl	69_37n	-1	known	missense	c.1934	p.K645T	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	HDX	HGNC	ENSG00000165259	348	0	0.00	277	108	28.05	-	-	-
ITGA10	0	genome.wustl.edu	37	1	145530929	145530929	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	145530929	145530929	G	A	SNP	ITGA10	ENST00000369304	human	ensembl	69_37n	+1	known	missense	c.661	p.D221N	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA10	HGNC	ENSG00000143127	306	0	0.00	408	116	22.14	-	-	-
ITIH4	0	genome.wustl.edu	37	3	52860882	52860882	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	3	52860882	52860882	C	A	SNP	ITIH4	ENST00000266041	human	ensembl	69_37n	-1	known	missense	c.444	p.E148D	1.000	pfam_VIT,smart_VIT	pfam_VIT,pfam_ITI_HC_C,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH4	HGNC	ENSG00000055955	101	0	0.00	67	31	31.63	-	-	-
KLRF1	0	genome.wustl.edu	37	12	9985925	9985925	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	12	9985925	9985925	C	T	SNP	KLRF1	ENST00000279544	human	ensembl	69_37n	+1	known	nonsense	c.211	p.Q71*	0.681	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRF1	HGNC	ENSG00000150045	277	0	0.00	167	79	32.11	-	-	-
KNG1	0	genome.wustl.edu	37	3	186450435	186450435	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	3	186450435	186450435	T	C	SNP	KNG1	ENST00000265023	human	ensembl	69_37n	+1	known	missense	c.902	p.I301T	1.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat,prints_Kininogen	-	no_errors	KNG1	HGNC	ENSG00000113889	162	0	0.00	164	73	30.80	-	-	-
LHX4	0	genome.wustl.edu	37	1	180243387	180243387	+	Silent	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	180243387	180243387	C	T	SNP	LHX4	ENST00000263726	human	ensembl	69_37n	+1	known	silent	c.846	p.G282	1.000	NULL	pfam_Znf_LIM,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeodomain,pfscan_Znf_LIM,pfscan_Homeodomain	-	no_errors	LHX4	HGNC	ENSG00000121454	90	0	0.00	92	27	22.69	-	-	-
LINC00283	0	genome.wustl.edu	37	13	103396384	103396384	+	RNA	DEL	A	A	-			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	13	103396384	103396384	A	-	DEL	LINC00283	ENST00000430111	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00283	HGNC	ENSG00000231633	438	0	0.00	272	145	34.28	-	-	-
LRRK2	0	genome.wustl.edu	37	12	40745430	40745430	+	Silent	SNP	T	T	G			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	12	40745430	40745430	T	G	SNP	LRRK2	ENST00000298910	human	ensembl	69_37n	+1	known	silent	c.6471	p.A2157	0.137	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	197	0	0.00	88	57	39.31	-	-	-
LRSAM1	0	genome.wustl.edu	37	9	130263396	130263396	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	9	130263396	130263396	G	C	SNP	LRSAM1	ENST00000300417	human	ensembl	69_37n	+1	known	missense	c.2020	p.E674Q	0.789	NULL	pfam_Leu-rich_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_PTS_PEP_utilis_N,smart_Leu-rich_rpt_typical-subtyp,smart_SAM,pfscan_SAM,pfscan_Znf_RING	-	no_errors	LRSAM1	HGNC	ENSG00000148356	71	0	0.00	60	10	14.29	-	-	-
MIR1185-1	0	genome.wustl.edu	37	14	101509363	101509363	+	RNA	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	14	101509363	101509363	C	T	SNP	MIR1185-1	ENST00000408598	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.211	-	-	-	no_errors	MIR1185-1	HGNC	ENSG00000221525	360	0	0.00	333	86	20.53	-	-	-
MYO1F	0	genome.wustl.edu	37	19	8601262	8601262	+	Silent	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	19	8601262	8601262	G	A	SNP	MYO1F	ENST00000338257	human	ensembl	69_37n	-1	known	silent	c.1917	p.P639	0.153	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain	-	no_errors	MYO1F	HGNC	ENSG00000142347	102	0	0.00	200	41	17.01	-	-	-
NPR3	0	genome.wustl.edu	37	5	32724819	32724819	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	5	32724819	32724819	C	T	SNP	NPR3	ENST00000265074	human	ensembl	69_37n	+1	known	missense	c.785	p.A262V	1.000	pfam_ANF_lig-bd_rcpt,prints_Ntpep_rcpt	pfam_ANF_lig-bd_rcpt,prints_Ntpep_rcpt	-	no_errors	NPR3	HGNC	ENSG00000113389	489	0	0.00	244	141	36.53	-	-	-
OR14K1	0	genome.wustl.edu	37	1	247902857	247902857	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	247902857	247902857	G	C	SNP	OR14K1	ENST00000283225	human	ensembl	69_37n	+1	known	missense	c.941	p.R314T	0.022	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR14K1	HGNC	ENSG00000153230	163	0	0.00	108	40	27.03	-	-	-
OR5D18	0	genome.wustl.edu	37	11	55587494	55587494	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	11	55587494	55587494	C	T	SNP	OR5D18	ENST00000333976	human	ensembl	69_37n	+1	known	missense	c.389	p.P130L	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5D18	HGNC	ENSG00000186119	371	0	0.00	289	81	21.89	-	-	-
PCDHA13	0	genome.wustl.edu	37	5	140263908	140263908	+	Silent	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	5	140263908	140263908	C	T	SNP	PCDHA13	ENST00000289272	human	ensembl	69_37n	+1	known	silent	c.2055	p.G685	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	44	0	0.00	22	10	31.25	-	-	-
PPL	0	genome.wustl.edu	37	16	4947726	4947726	+	Silent	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	16	4947726	4947726	G	A	SNP	PPL	ENST00000345988	human	ensembl	69_37n	-1	known	silent	c.922	p.L308	1.000	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898	92	0	0.00	59	24	28.92	-	-	-
PTPRZ1	0	genome.wustl.edu	37	7	121624110	121624110	+	Silent	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	7	121624110	121624110	G	A	SNP	PTPRZ1	ENST00000393386	human	ensembl	69_37n	+1	known	silent	c.867	p.Q289	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	425	0	0.00	430	134	23.76	-	-	-
PTRHD1	0	genome.wustl.edu	37	2	25016138	25016138	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	2	25016138	25016138	G	T	SNP	PTRHD1	ENST00000328379	human	ensembl	69_37n	-1	known	missense	c.109	p.Q37K	0.983	pfam_Pep_tRNA_hydro_PTH2,superfamily_Pep_tRNA_hydro_II_dom	pfam_Pep_tRNA_hydro_PTH2,superfamily_Pep_tRNA_hydro_II_dom	-	no_errors	PTRHD1	HGNC	ENSG00000184924	44	0	0.00	23	11	32.35	-	-	-
RPRD2	0	genome.wustl.edu	37	1	150430016	150430016	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	150430016	150430016	G	T	SNP	RPRD2	ENST00000369068	human	ensembl	69_37n	+1	known	missense	c.1123	p.D375Y	1.000	NULL	pfam_RNA_pol_II-bd,superfamily_ENTH_VHS,superfamily_Ricin_B_lectin,smart_RNA_polymerase_II_lsu_CTD	-	no_errors	RPRD2	HGNC	ENSG00000163125	195	0	0.00	377	49	11.50	-	-	-
RRAGB	0	genome.wustl.edu	37	X	55757917	55757917	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	X	55757917	55757917	T	-	DEL	RRAGB	ENST00000262850	human	ensembl	69_37n	+1	known	frame_shift_del	c.498	p.Y167fs	1.000	pfam_Gtr1_RagA,pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR	pfam_Gtr1_RagA,pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR	-	no_errors	RRAGB	HGNC	ENSG00000083750	159	0	0.00	140	44	23.78	-	-	-
RTN2	0	genome.wustl.edu	37	19	45991899	45991899	+	Silent	SNP	A	A	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	19	45991899	45991899	A	T	SNP	RTN2	ENST00000245923	human	ensembl	69_37n	-1	known	silent	c.1446	p.I482	0.970	pfam_Reticulon,pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN2	HGNC	ENSG00000125744	171	0	0.00	145	49	25.26	-	-	-
SLC22A16	0	genome.wustl.edu	37	6	110778014	110778014	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	6	110778014	110778014	G	A	SNP	SLC22A16	ENST00000368919	human	ensembl	69_37n	-1	known	missense	c.260	p.T87M	0.000	NULL	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A16	HGNC	ENSG00000004809	360	0	0.00	306	103	25.18	-	-	-
SNRNP48	0	genome.wustl.edu	37	6	7609080	7609080	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	6	7609080	7609080	C	T	SNP	SNRNP48	ENST00000342415	human	ensembl	69_37n	+1	known	missense	c.994	p.H332Y	1.000	NULL	pfam_TRM13/UPF0224_CHHC_Znf_dom	-	no_errors	SNRNP48	HGNC	ENSG00000168566	135	0	0.00	105	38	26.57	-	-	-
SSX5	0	genome.wustl.edu	37	X	48049613	48049613	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	X	48049613	48049613	G	T	SNP	SSX5	ENST00000311798	human	ensembl	69_37n	-1	known	missense	c.545	p.P182H	0.000	NULL	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX5	HGNC	ENSG00000165583	553	0	0.00	495	217	30.48	-	-	-
TAX1BP1	0	genome.wustl.edu	37	7	27833979	27833979	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	7	27833979	27833979	A	T	SNP	TAX1BP1	ENST00000396319	human	ensembl	69_37n	+1	known	missense	c.1448	p.N483I	0.869	NULL	pfam_CoCoA	-	no_errors	TAX1BP1	HGNC	ENSG00000106052	178	0	0.00	147	47	24.23	-	-	-
TDRD9	0	genome.wustl.edu	37	14	104484481	104484481	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	14	104484481	104484481	T	C	SNP	TDRD9	ENST00000409874	human	ensembl	69_37n	+1	known	missense	c.2384	p.L795P	1.000	NULL	pfam_Helicase-assoc_dom,pfam_Tudor,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,smart_Tudor,pfscan_Tudor,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TDRD9	HGNC	ENSG00000156414	290	0	0.00	321	125	28.03	-	-	-
TFE3	0	genome.wustl.edu	37	X	48887874	48887874	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	X	48887874	48887874	T	A	SNP	TFE3	ENST00000315869	human	ensembl	69_37n	-1	known	missense	c.1523	p.D508V	1.000	pfam_bHLH_ZIP_TF_MiT/TFE	pfam_bHLH_ZIP_TF_MiT/TFE,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	TFE3	HGNC	ENSG00000068323	106	0	0.00	85	18	17.31	-	-	-
TINAG	0	genome.wustl.edu	37	6	54254622	54254622	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	6	54254622	54254622	G	T	SNP	TINAG	ENST00000259782	human	ensembl	69_37n	+1	known	nonsense	c.1330	p.E444*	1.000	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,smart_Peptidase_C1A_C,pfscan_Somatomedin_B_dom	-	no_errors	TINAG	HGNC	ENSG00000137251	198	0	0.00	164	45	21.53	-	-	-
TP53	0	genome.wustl.edu	37	17	7579419	7579419	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	17	7579419	7579419	A	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_del	c.268	p.S90fs	0.136	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	53	0	0.00	30	14	29.17	-	-	-
TTC31	0	genome.wustl.edu	37	2	74719297	74719297	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	2	74719297	74719297	C	G	SNP	TTC31	ENST00000233623	human	ensembl	69_37n	+1	novel	missense	c.960	p.F320L	0.994	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC31	HGNC	ENSG00000115282	266	0	0.00	188	82	30.37	-	-	-
TTYH1	0	genome.wustl.edu	37	19	54937907	54937907	+	Silent	SNP	C	C	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	19	54937907	54937907	C	T	SNP	TTYH1	ENST00000376531	human	ensembl	69_37n	+1	known	silent	c.696	p.L232	1.000	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH1	HGNC	ENSG00000167614	110	0	0.00	89	28	23.93	-	-	-
UCK2	0	genome.wustl.edu	37	1	165875164	165875164	+	Nonsense_Mutation	SNP	A	A	T			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	1	165875164	165875164	A	T	SNP	UCK2	ENST00000367879	human	ensembl	69_37n	+1	known	nonsense	c.604	p.K202*	1.000	pfam_PRK/URK,prints_Uridine_kinase,tigrfam_Uridine_kinase	pfam_PRK/URK,pfam_Depp_CoAkinase,prints_Uridine_kinase,prints_PRK,tigrfam_Uridine_kinase	-	no_errors	UCK2	HGNC	ENSG00000143179	336	1	0.30	368	74	16.70	-	-	-
ZFAND2B	0	genome.wustl.edu	37	2	220072393	220072393	+	Silent	SNP	T	T	C			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	2	220072393	220072393	T	C	SNP	ZFAND2B	ENST00000289528	human	ensembl	69_37n	+1	known	silent	c.174	p.P58	0.012	NULL	pfam_Znf_AN1,smart_Znf_AN1,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Znf_AN1	-	no_errors	ZFAND2B	HGNC	ENSG00000158552	186	0	0.00	123	49	28.49	-	-	-
ZNF415	0	genome.wustl.edu	37	19	53612856	53612856	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AR-01A-31D-A135-09	TCGA-AR-A1AR-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	008ba655-a0a3-42c4-8c72-f1341365ef02	0395a62f-3f37-4068-bab6-4c1d29cef2d5	19	53612856	53612856	G	A	SNP	ZNF415	ENST00000448501	human	ensembl	69_37n	-1	known	missense	c.586	p.H196Y	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2	-	no_errors	ZNF415	HGNC	ENSG00000170954	243	0	0.00	186	78	29.55	-	-	-
