Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACPL2	0	genome.wustl.edu	37	3	141011671	141011671	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	3	141011671	141011671	C	-	DEL	ACPL2	ENST00000286353	human	ensembl	69_37n	+1	known	frame_shift_del	c.1067	p.I357fs	0.827	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	ACPL2	HGNC	ENSG00000155893	49	0	0.00	35	8	18.18	-	-	-
ANLN	0	genome.wustl.edu	37	7	36447401	36447401	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	7	36447401	36447401	G	A	SNP	ANLN	ENST00000265748	human	ensembl	69_37n	+1	known	missense	c.932	p.G311E	0.198	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	ANLN	HGNC	ENSG00000011426	64	0	0.00	54	25	31.65	-	-	-
BNC2	0	genome.wustl.edu	37	9	16552753	16552753	+	Silent	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	9	16552753	16552753	C	T	SNP	BNC2	ENST00000380672	human	ensembl	69_37n	-1	known	silent	c.444	p.K148	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC2	HGNC	ENSG00000173068	37	0	0.00	47	15	24.19	-	-	-
BPIFA4P	0	genome.wustl.edu	37	20	31787199	31787199	+	RNA	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	20	31787199	31787199	C	T	SNP	BPIFA4P	ENST00000375465	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BPIFA4P	HGNC	ENSG00000183566	71	0	0.00	53	21	28.00	-	-	-
CA13	0	genome.wustl.edu	37	8	86178919	86178919	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	8	86178919	86178919	G	A	SNP	CA13	ENST00000321764	human	ensembl	69_37n	+1	known	missense	c.437	p.G146E	0.998	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA13	HGNC	ENSG00000185015	98	0	0.00	141	25	15.06	-	-	-
CARD9	0	genome.wustl.edu	37	9	139265795	139265795	+	Silent	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	9	139265795	139265795	G	A	SNP	CARD9	ENST00000371732	human	ensembl	69_37n	-1	known	silent	c.303	p.R101	0.022	superfamily_DEATH-like	pfam_CARD,superfamily_DEATH-like,pfscan_CARD	-	no_errors	CARD9	HGNC	ENSG00000187796	53	0	0.00	60	12	16.67	-	-	-
CCDC108	0	genome.wustl.edu	37	2	219897223	219897223	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	2	219897223	219897223	G	A	SNP	CCDC108	ENST00000341552	human	ensembl	69_37n	-1	known	missense	c.614	p.T205M	0.099	NULL	superfamily_PapD-like,pfscan_Major_sperm	-	no_errors	CCDC108	HGNC	ENSG00000181378	36	0	0.00	32	8	20.00	-	-	-
CEACAM18	0	genome.wustl.edu	37	19	51981843	51981843	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	19	51981843	51981843	G	T	SNP	CEACAM18	ENST00000451626	human	ensembl	69_37n	+1	known	nonsense	c.130	p.E44*	0.033	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	CEACAM18	HGNC	ENSG00000213822	56	0	0.00	47	18	27.69	-	-	-
CFHR3	0	genome.wustl.edu	37	1	196757919	196757919	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	196757919	196757919	T	C	SNP	CFHR3	ENST00000367427	human	ensembl	69_37n	+1	known	missense	c.658	p.C220R	0.000	NULL	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR3	HGNC	ENSG00000116785	51	0	0.00	55	9	14.06	-	-	-
CLCNKA	0	genome.wustl.edu	37	1	16360190	16360190	+	RNA	SNP	A	A	C			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	16360190	16360190	A	C	SNP	CLCNKA	ENST00000464764	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CLCNKA	HGNC	ENSG00000186510	35	0	0.00	33	5	13.16	-	-	-
CPEB3	0	genome.wustl.edu	37	10	93999919	93999920	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	10	93999919	93999920	-	G	INS	CPEB3	ENST00000265997	human	ensembl	69_37n	-1	known	frame_shift_ins	c.189_188	p.A64fs	1.000:1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPEB3	HGNC	ENSG00000107864	43	0	0.00	48	11	18.64	-	-	-
CTNNA2	0	genome.wustl.edu	37	2	80874927	80874927	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	2	80874927	80874927	G	A	SNP	CTNNA2	ENST00000361291	human	ensembl	69_37n	+1	known	missense	c.2750	p.R917Q	1.000	NULL	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	22	0	0.00	15	5	25.00	-	-	-
EIF4A2	0	genome.wustl.edu	37	3	186501401	186501401	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	3	186501401	186501401	T	A	SNP	EIF4A2	ENST00000440191	human	ensembl	69_37n	+1	known	missense	c.2	p.M1K	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	EIF4A2	HGNC	ENSG00000156976	87	0	0.00	60	14	18.92	-	-	-
ELK1	0	genome.wustl.edu	37	X	47498441	47498441	+	Silent	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	X	47498441	47498441	C	T	SNP	ELK1	ENST00000247161	human	ensembl	69_37n	-1	known	silent	c.507	p.P169	0.946	NULL	pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ELK1	HGNC	ENSG00000126767	122	0	0.00	66	28	29.79	-	-	-
F8	0	genome.wustl.edu	37	X	154194831	154194831	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	X	154194831	154194831	C	T	SNP	F8	ENST00000360256	human	ensembl	69_37n	-1	known	missense	c.1141	p.D381N	0.572	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	87	0	0.00	80	18	18.37	-	-	-
FAM193B	0	genome.wustl.edu	37	5	176958509	176958509	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	5	176958509	176958509	G	A	SNP	FAM193B	ENST00000443375	human	ensembl	69_37n	-1	known	missense	c.950	p.P317L	1.000	NULL	NULL	-	no_errors	FAM193B	HGNC	ENSG00000146067	44	0	0.00	24	15	38.46	-	-	-
FASN	0	genome.wustl.edu	37	17	80040424	80040424	+	Silent	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	17	80040424	80040424	G	A	SNP	FASN	ENST00000306749	human	ensembl	69_37n	-1	known	silent	c.5898	p.G1966	0.103	pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,smart_PKS/FAS_KR	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	51	0	0.00	38	7	15.56	-	-	-
FCRL5	0	genome.wustl.edu	37	1	157490260	157490260	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	157490260	157490260	C	T	SNP	FCRL5	ENST00000356953	human	ensembl	69_37n	-1	known	missense	c.2593	p.G865R	0.001	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCRL5	HGNC	ENSG00000143297	27	0	0.00	27	7	20.59	-	-	-
FOLH1	0	genome.wustl.edu	37	11	49204790	49204790	+	Silent	SNP	A	A	G			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	11	49204790	49204790	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	69_37n	-1	known	silent	c.831	p.Y277	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	49	0	0.00	36	4	10.00	-	-	-
GJC2	0	genome.wustl.edu	37	1	228345773	228345773	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	228345773	228345773	C	T	SNP	GJC2	ENST00000366714	human	ensembl	69_37n	+1	known	missense	c.314	p.A105V	0.001	pfam_Connexin_N	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJC2	HGNC	ENSG00000198835	12	0	0.00	7	5	41.67	-	-	-
GNB5	0	genome.wustl.edu	37	15	52416711	52416711	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	15	52416711	52416711	C	T	SNP	GNB5	ENST00000261837	human	ensembl	69_37n	-1	known	missense	c.1135	p.G379R	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Guanine_nucleotide-bd_bsu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Guanine_nucleotide-bd_bsu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep	-	no_errors	GNB5	HGNC	ENSG00000069966	75	0	0.00	52	9	14.75	-	-	-
KCNU1	0	genome.wustl.edu	37	8	36788602	36788602	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	8	36788602	36788602	G	T	SNP	KCNU1	ENST00000399881	human	ensembl	69_37n	+1	known	missense	c.2870	p.G957V	0.001	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_2,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262	70	0	0.00	150	19	11.24	-	-	-
KRT1	0	genome.wustl.edu	37	12	53069280	53069280	+	Silent	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	12	53069280	53069280	G	A	SNP	KRT1	ENST00000252244	human	ensembl	69_37n	-1	known	silent	c.1632	p.G544	0.001	NULL	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT1	HGNC	ENSG00000167768	84	0	0.00	76	15	16.48	-	-	-
LILRA4	0	genome.wustl.edu	37	19	54848688	54848689	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	19	54848688	54848689	-	G	INS	LILRA4	ENST00000291759	human	ensembl	69_37n	-1	known	frame_shift_ins	c.935_934	p.L312fs	0.979:0.982	smart_Ig_sub,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like	-	no_errors	LILRA4	HGNC	ENSG00000239961	95	0	0.00	65	23	26.14	-	-	-
LILRB1	0	genome.wustl.edu	37	19	55146043	55146043	+	RNA	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	19	55146043	55146043	C	T	SNP	LILRB1	ENST00000462628	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LILRB1	HGNC	ENSG00000104972	72	0	0.00	52	9	14.75	-	-	-
MAOB	0	genome.wustl.edu	37	X	43626803	43626803	+	Silent	SNP	G	G	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	X	43626803	43626803	G	T	SNP	MAOB	ENST00000378069	human	ensembl	69_37n	-1	known	silent	c.1473	p.G491	0.592	NULL	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	-	no_errors	MAOB	HGNC	ENSG00000069535	96	0	0.00	67	31	31.63	-	-	-
MBL1P	0	genome.wustl.edu	37	10	81680252	81680252	+	RNA	SNP	A	A	G			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	10	81680252	81680252	A	G	SNP	MBL1P	ENST00000480805	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MBL1P	HGNC	ENSG00000242600	55	0	0.00	47	7	12.73	-	-	-
MEP1A	0	genome.wustl.edu	37	6	46797126	46797126	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	6	46797126	46797126	C	T	SNP	MEP1A	ENST00000230588	human	ensembl	69_37n	+1	known	missense	c.962	p.S321L	0.000	pirsf_Pept_M12A_Meprin,pfam_MAM_dom,superfamily_ConA-like_lec_gl,smart_MAM_dom,prints_MAM_dom,pfscan_MAM_dom	pirsf_Pept_M12A_Meprin,pfam_Peptidase_M12A,pfam_MATH,pfam_MAM_dom,pfam_EGF-like_dom,superfamily_TRAF-like,superfamily_ConA-like_lec_gl,smart_Peptidase_Metallo,smart_MAM_dom,smart_MATH,prints_Peptidase_M12A,prints_MAM_dom,pfscan_EG-like_dom,pfscan_MATH,pfscan_MAM_dom	-	no_errors	MEP1A	HGNC	ENSG00000112818	44	0	0.00	51	16	23.88	-	-	-
NSUN4	0	genome.wustl.edu	37	1	46807697	46807697	+	RNA	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	46807697	46807697	C	T	SNP	NSUN4	ENST00000498008	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	NSUN4	HGNC	ENSG00000117481	64	0	0.00	42	5	10.42	-	-	-
OR6P1	0	genome.wustl.edu	37	1	158532977	158532977	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	158532977	158532977	G	T	SNP	OR6P1	ENST00000334632	human	ensembl	69_37n	-1	known	missense	c.418	p.L140M	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR6P1	HGNC	ENSG00000186440	28	0	0.00	29	6	17.14	-	-	-
PAQR7	0	genome.wustl.edu	37	1	26189712	26189712	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	26189712	26189712	C	-	DEL	PAQR7	ENST00000374296	human	ensembl	69_37n	-1	known	frame_shift_del	c.619	p.E207fs	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR7	HGNC	ENSG00000182749	36	0	0.00	11	2	15.38	-	-	-
PNN	0	genome.wustl.edu	37	14	39649964	39649965	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	14	39649964	39649965	AA	-	DEL	PNN	ENST00000216832	human	ensembl	69_37n	+1	known	frame_shift_del	c.1051_1052	p.K351fs	1.000:1.000	NULL	pfam_Pinin_SDK_N,pfam_Pinin_SDK_MemA	-	no_errors	PNN	HGNC	ENSG00000100941	45	0	0.00	33	5	13.16	-	-	-
PRPF3	0	genome.wustl.edu	37	1	150307463	150307463	+	Silent	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	150307463	150307463	G	A	SNP	PRPF3	ENST00000324862	human	ensembl	69_37n	+1	known	silent	c.786	p.G262	0.982	NULL	pfam_Pre-mRNA_splic_Prp3,pfam_DUF1115,pfam_PWI,superfamily_PWI,smart_PWI	-	no_errors	PRPF3	HGNC	ENSG00000117360	41	0	0.00	48	11	18.64	-	-	-
PRRC2C	0	genome.wustl.edu	37	1	171526403	171526403	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	171526403	171526403	G	A	SNP	PRRC2C	ENST00000392078	human	ensembl	69_37n	+1	known	missense	c.5152	p.E1718K	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523	48	0	0.00	58	8	12.12	-	-	-
PSG5	0	genome.wustl.edu	37	19	43687592	43687592	+	Silent	SNP	T	T	C			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	19	43687592	43687592	T	C	SNP	PSG5	ENST00000401992	human	ensembl	69_37n	-1	putative	silent	c.462	p.T154	0.000	NULL	pfam_Ig_V-set	-	no_errors	PSG5	HGNC	ENSG00000204941	54	0	0.00	38	12	24.00	-	-	-
RGAG1	0	genome.wustl.edu	37	X	109696711	109696711	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	X	109696711	109696711	G	A	SNP	RGAG1	ENST00000465301	human	ensembl	69_37n	+1	known	missense	c.2866	p.A956T	0.001	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978	86	0	0.00	59	17	22.37	-	-	-
RPS6KA2	0	genome.wustl.edu	37	6	166923827	166923827	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	6	166923827	166923827	G	T	SNP	RPS6KA2	ENST00000510118	human	ensembl	69_37n	-1	known	nonsense	c.392	p.S131*	0.885	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	RPS6KA2	HGNC	ENSG00000071242	28	0	0.00	42	12	22.22	-	-	-
SMAD6	0	genome.wustl.edu	37	15	67073407	67073407	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	15	67073407	67073407	G	A	SNP	SMAD6	ENST00000288840	human	ensembl	69_37n	+1	known	missense	c.1025	p.R342H	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD6	HGNC	ENSG00000137834	102	0	0.00	106	26	19.70	-	-	-
TGS1	0	genome.wustl.edu	37	8	56737254	56737254	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	8	56737254	56737254	G	A	SNP	TGS1	ENST00000260129	human	ensembl	69_37n	+1	known	missense	c.2554	p.E852K	1.000	NULL	pfam_RNA_cap_Gua-N2-MeTrfase,pfam_RNA_methylase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TGS1	HGNC	ENSG00000137574	68	0	0.00	43	14	24.56	-	-	-
TMEM14B	0	genome.wustl.edu	37	6	10756854	10756854	+	RNA	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	6	10756854	10756854	C	T	SNP	TMEM14B	ENST00000486421	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	TMEM14B	HGNC	ENSG00000137210	17	0	0.00	12	7	36.84	-	-	-
TSHZ3	0	genome.wustl.edu	37	19	31769937	31769937	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	19	31769937	31769937	C	T	SNP	TSHZ3	ENST00000240587	human	ensembl	69_37n	-1	known	nonsense	c.762	p.W254*	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	45	0	0.00	43	8	15.69	-	-	-
UBE2QL1	0	genome.wustl.edu	37	5	6449081	6449081	+	Silent	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	5	6449081	6449081	C	T	SNP	UBE2QL1	ENST00000399816	human	ensembl	69_37n	+1	known	silent	c.75	p.F25	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2QL1	HGNC	ENSG00000215218	41	0	0.00	23	15	39.47	-	-	-
UBE4B	0	genome.wustl.edu	37	1	10221207	10221207	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	1	10221207	10221207	A	G	SNP	UBE4B	ENST00000343090	human	ensembl	69_37n	+1	known	missense	c.3061	p.K1021E	1.000	pfam_Ub_conjug_fac_E4_core	pfam_Ub_conjug_fac_E4_core,pfam_Ubox_domain,smart_Ubox_domain	-	no_errors	UBE4B	HGNC	ENSG00000130939	69	0	0.00	43	11	20.37	-	-	-
ZNF268	0	genome.wustl.edu	37	12	133780523	133780523	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	12	133780523	133780523	C	T	SNP	ZNF268	ENST00000228289	human	ensembl	69_37n	+1	known	missense	c.2251	p.P751S	0.121	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF268	HGNC	ENSG00000090612	32	0	0.00	24	5	17.24	-	-	-
ZNF573	0	genome.wustl.edu	37	19	38284083	38284083	+	RNA	SNP	C	C	T			TCGA-AR-A5QN-01A-12D-A28B-09	TCGA-AR-A5QN-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b786e544-43c3-4fe3-a81e-5c1cf5f7c82d	dff99bc6-c494-4862-9fc9-10e8f8d98628	19	38284083	38284083	C	T	SNP	ZNF573	ENST00000587684	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ZNF573	HGNC	ENSG00000189144	31	0	0.00	16	6	27.27	-	-	-
