Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS6	0	genome.wustl.edu	37	5	64747993	64747993	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	5	64747993	64747993	T	C	SNP	ADAMTS6	ENST00000381055	human	ensembl	69_37n	-1	known	missense	c.894	p.I298M	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192	85	0	0.00	77	20	20.62	-	-	-
ADAMTS6	0	genome.wustl.edu	37	5	64747994	64747994	+	Missense_Mutation	SNP	A	A	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	5	64747994	64747994	A	T	SNP	ADAMTS6	ENST00000381055	human	ensembl	69_37n	-1	known	missense	c.893	p.I298K	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192	86	0	0.00	78	20	20.41	-	-	-
AP1G2	0	genome.wustl.edu	37	14	24035346	24035346	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	14	24035346	24035346	C	T	SNP	AP1G2	ENST00000308724	human	ensembl	69_37n	-1	known	missense	c.495	p.M165I	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP1_complex_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP1_complex_gsu,pfscan_Clathrin_g-adaptin_app	-	no_errors	AP1G2	HGNC	ENSG00000213983	106	0	0.00	43	8	15.69	-	-	-
ATP12A	0	genome.wustl.edu	37	13	25281421	25281421	+	Silent	SNP	C	C	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	13	25281421	25281421	C	T	SNP	ATP12A	ENST00000218548	human	ensembl	69_37n	+1	known	silent	c.2361	p.R787	1.000	tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP12A	HGNC	ENSG00000075673	153	0	0.00	51	16	23.88	-	-	-
ATP5SL	0	genome.wustl.edu	37	19	41939224	41939224	+	Silent	SNP	A	A	G			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	19	41939224	41939224	A	G	SNP	ATP5SL	ENST00000417807	human	ensembl	69_37n	-1	known	silent	c.567	p.G189	0.237	NULL	NULL	-	no_errors	ATP5SL	HGNC	ENSG00000105341	34	0	0.00	30	15	33.33	-	-	-
BCMO1	0	genome.wustl.edu	37	16	81279117	81279117	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	16	81279117	81279117	C	T	SNP	BCMO1	ENST00000425577	human	ensembl	69_37n	+1	known	nonsense	c.25	p.Q9*	0.852	NULL	pfam_Carotenoid_Oase	-	no_errors	BCMO1	HGNC	ENSG00000135697	104	0	0.00	45	28	38.36	-	-	-
BIN1	0	genome.wustl.edu	37	2	127806177	127806177	+	Silent	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	2	127806177	127806177	G	A	SNP	BIN1	ENST00000316724	human	ensembl	69_37n	-1	known	silent	c.1707	p.S569	0.075	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_Amphiphysin,prints_Amphiphysin_2,prints_SH3_domain	-	no_errors	BIN1	HGNC	ENSG00000136717	26	0	0.00	6	5	45.45	-	-	-
C9orf43	0	genome.wustl.edu	37	9	116187645	116187646	+	In_Frame_Ins	INS	-	-	GCA			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	9	116187645	116187646	-	GCA	INS	C9orf43	ENST00000288462	human	ensembl	69_37n	+1	known	in_frame_ins	c.887_888	p.300in_frame_insQ	0.000:0.211	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653	136	1	0.73	117	16	12.03	-	-	-
CCDC136	0	genome.wustl.edu	37	7	128434806	128434806	+	Silent	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	7	128434806	128434806	G	A	SNP	CCDC136	ENST00000297788	human	ensembl	69_37n	+1	known	silent	c.330	p.Q110	1.000	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596	48	0	0.00	33	6	15.38	-	-	-
CCNT2	0	genome.wustl.edu	37	2	135676546	135676547	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	2	135676546	135676547	-	A	INS	CCNT2	ENST00000264157	human	ensembl	69_37n	+1	known	frame_shift_ins	c.122_123	p.N42fs	1.000:1.000	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNT2	HGNC	ENSG00000082258	137	0	0.00	61	20	24.69	-	-	-
CDCA7	0	genome.wustl.edu	37	2	174230273	174230273	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	2	174230273	174230273	G	A	SNP	CDCA7	ENST00000306721	human	ensembl	69_37n	+1	known	missense	c.988	p.E330K	0.998	NULL	pfam_Znf-4CXXC_R1	-	no_errors	CDCA7	HGNC	ENSG00000144354	94	0	0.00	49	8	14.04	-	-	-
CORO1B	0	genome.wustl.edu	37	11	67207618	67207619	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	11	67207618	67207619	-	C	INS	CORO1B	ENST00000341356	human	ensembl	69_37n	-1	known	frame_shift_ins	c.978_977	p.L327fs	0.996:1.000	pfam_DUF1900	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO1B	HGNC	ENSG00000172725	16	0	0.00	4	2	33.33	-	-	-
CYB5R1	0	genome.wustl.edu	37	1	202935526	202935527	+	RNA	INS	-	-	GT			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	1	202935526	202935527	-	GT	INS	CYB5R1	ENST00000478009	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CYB5R1	HGNC	ENSG00000159348	26	0	0.00	9	3	25.00	-	-	-
DMBT1	0	genome.wustl.edu	37	10	124402882	124402883	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	10	124402882	124402883	-	C	INS	DMBT1	ENST00000368915	human	ensembl	69_37n	+1	known	frame_shift_ins	c.7597_7598	p.R2536fs	0.000:0.000	NULL	pfam_Srcr_rcpt,pfam_CUB,pfam_Zona_pellucida_Endoglin/CD105,superfamily_Srcr_rcpt-rel,superfamily_CUB,smart_Srcr_rcpt-rel,smart_CUB,smart_Zona_pellucida_Endoglin/CD105,pfscan_CUB,pfscan_Srcr_rcpt,pfscan_Zona_pellucida_Endoglin/CD105,prints_Srcr_rcpt	-	no_errors	DMBT1	HGNC	ENSG00000187908	57	0	0.00	25	4	13.79	-	-	-
EIF2AK3	0	genome.wustl.edu	37	2	88857363	88857364	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	2	88857363	88857364	-	C	INS	EIF2AK3	ENST00000303236	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3242_3241	p.D1081fs	1.000:1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	EIF2AK3	HGNC	ENSG00000172071	430	0	0.00	227	62	21.45	-	-	-
FANCA	0	genome.wustl.edu	37	16	89836576	89836576	+	Frame_Shift_Del	DEL	G	G	-			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	16	89836576	89836576	G	-	DEL	FANCA	ENST00000389301	human	ensembl	69_37n	-1	known	frame_shift_del	c.2314	p.Q772fs	1.000	NULL	pfam_Fanconia,prints_Fanconia	-	no_errors	FANCA	HGNC	ENSG00000187741	45	0	0.00	14	2	12.50	-	-	-
GATA3	0	genome.wustl.edu	37	10	8115960	8115961	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	10	8115960	8115961	-	C	INS	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1309_1310	p.S438fs	1.000:1.000	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	72	0	0.00	37	23	38.33	-	-	-
GIPC3	0	genome.wustl.edu	37	19	3590123	3590123	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	19	3590123	3590123	T	-	DEL	GIPC3	ENST00000322315	human	ensembl	69_37n	+1	known	frame_shift_del	c.874	p.F292fs	1.000	pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC3	HGNC	ENSG00000179855	41	0	0.00	11	2	15.38	-	-	-
GPC5	0	genome.wustl.edu	37	13	92345973	92345973	+	Silent	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	13	92345973	92345973	G	A	SNP	GPC5	ENST00000377067	human	ensembl	69_37n	+1	known	silent	c.858	p.A286	0.060	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399	92	0	0.00	43	8	15.69	-	-	-
HMGN2P46	0	genome.wustl.edu	37	15	45848230	45848231	+	RNA	INS	-	-	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	15	45848230	45848231	-	T	INS	HMGN2P46	ENST00000313559	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.997:0.997	-	-	-	no_errors	HMGN2P46	HGNC	ENSG00000179362	9	0	0.00	3	2	40.00	-	-	-
IGHM	0	genome.wustl.edu	37	14	106322070	106322070	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	14	106322070	106322070	T	A	SNP	IGHM	ENST00000390559	human	ensembl	69_37n	-1	known	missense	c.254	p.H85L	0.004	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_C1-set,pfscan_Ig-like	-	no_start_codon	IGHM	HGNC	ENSG00000211899	75	0	0.00	24	11	31.43	-	-	-
KIAA0913	0	genome.wustl.edu	37	10	75545602	75545603	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	10	75545602	75545603	-	G	INS	KIAA0913	ENST00000446546	human	ensembl	69_37n	+1	known	frame_shift_ins	c.220_221	p.T77fs	1.000:1.000	NULL	pfscan_Znf_SWIM	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	KIAA0913	HGNC	ENSG00000214655	11	0	0.00	4	3	42.86	-	-	-
LPHN3	0	genome.wustl.edu	37	4	62935938	62935938	+	Missense_Mutation	SNP	T	T	G			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	4	62935938	62935938	T	G	SNP	LPHN3	ENST00000507625	human	ensembl	69_37n	+1	known	missense	c.3899	p.V1300G	1.000	pfam_GPCR_2_latrophilin_rcpt_C	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471	63	0	0.00	25	16	39.02	-	-	-
LRRC4B	0	genome.wustl.edu	37	19	51022088	51022088	+	Silent	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	19	51022088	51022088	G	A	SNP	LRRC4B	ENST00000389201	human	ensembl	69_37n	-1	known	silent	c.882	p.H294	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LRRC4B	HGNC	ENSG00000131409	36	0	0.00	16	5	23.81	-	-	-
MAML3	0	genome.wustl.edu	37	4	140811111	140811111	+	Silent	SNP	C	C	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	4	140811111	140811111	C	T	SNP	MAML3	ENST00000509479	human	ensembl	69_37n	-1	known	silent	c.1479	p.Q493	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782	91	0	0.00	83	18	17.82	-	-	-
MST1	0	genome.wustl.edu	37	3	49722497	49722498	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	3	49722497	49722498	-	C	INS	MST1	ENST00000449682	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1570_1569	p.S523fs	0.997:0.333	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531	13	0	0.00	4	2	33.33	-	-	-
MTR	0	genome.wustl.edu	37	1	236959013	236959013	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	1	236959013	236959013	G	A	SNP	MTR	ENST00000366577	human	ensembl	69_37n	+1	known	missense	c.10	p.A4T	0.159	NULL	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	45	0	0.00	21	8	27.59	-	-	-
OR51A7	0	genome.wustl.edu	37	11	4929530	4929530	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	11	4929530	4929530	G	T	SNP	OR51A7	ENST00000359350	human	ensembl	69_37n	+1	known	missense	c.931	p.G311W	0.006	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR51A7	HGNC	ENSG00000176895	90	0	0.00	38	19	33.33	-	-	-
PARP3	0	genome.wustl.edu	37	3	51981815	51981815	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	3	51981815	51981815	C	A	SNP	PARP3	ENST00000398755	human	ensembl	69_37n	+1	known	missense	c.1357	p.L453M	0.883	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_WGR_domain,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,smart_WGR_domain,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP3	HGNC	ENSG00000041880	201	0	0.00	130	38	22.62	-	-	-
PCDHGA11	0	genome.wustl.edu	37	5	140801563	140801564	+	In_Frame_Ins	INS	-	-	AGG			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	5	140801563	140801564	-	AGG	INS	PCDHGA11	ENST00000398587	human	ensembl	69_37n	+1	known	in_frame_ins	c.769_770	p.S257in_frame_insKG	0.115:0.122	pfam_Cadherin,superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873	49	0	0.00	29	15	34.09	-	-	-
PRKG2	0	genome.wustl.edu	37	4	82074711	82074711	+	Splice_Site	SNP	T	T	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	4	82074711	82074711	T	A	SNP	PRKG2	ENST00000545647	human	ensembl	69_37n	-1	known	splice_site	c.1-2	e1-2	0.001	-	-	-	no_errors	PRKG2	HGNC	ENSG00000138669	35	0	0.00	25	10	28.57	-	-	-
RARB	0	genome.wustl.edu	37	3	25542800	25542800	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	3	25542800	25542800	G	A	SNP	RARB	ENST00000404969	human	ensembl	69_37n	+1	known	missense	c.455	p.G152E	1.000	pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARB	HGNC	ENSG00000077092	162	0	0.00	73	35	31.82	-	-	-
ROCK1	0	genome.wustl.edu	37	18	18586384	18586384	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	18	18586384	18586384	G	A	SNP	ROCK1	ENST00000399799	human	ensembl	69_37n	-1	known	nonsense	c.1813	p.Q605*	1.000	pirsf_Rho-assoc_coiled-coil_kinase	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rho-bd,pfam_HR1_rho-bd,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kinase,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	ROCK1	HGNC	ENSG00000067900	536	0	0.00	269	195	41.94	-	-	-
SHPRH	0	genome.wustl.edu	37	6	146262775	146262776	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	6	146262775	146262776	-	C	INS	SHPRH	ENST00000367503	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2474_2473	p.E825fs	1.000:1.000	pfam_SNF2_N,smart_Helicase_ATP-bd	pfam_SNF2_N,pfam_Histone_H1/H5,superfamily_Znf_FYVE_PHD,superfamily_WW_Rsp5_WWP,smart_Helicase_ATP-bd,smart_Histone_H1/H5,smart_Znf_PHD,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_C	-	no_errors	SHPRH	HGNC	ENSG00000146414	44	0	0.00	14	4	22.22	-	-	-
SLC20A2	0	genome.wustl.edu	37	8	42297142	42297142	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	8	42297142	42297142	G	A	SNP	SLC20A2	ENST00000342228	human	ensembl	69_37n	-1	known	nonsense	c.760	p.R254*	0.017	pfam_Phos_transporter	pfam_Phos_transporter	-	no_errors	SLC20A2	HGNC	ENSG00000168575	146	0	0.00	60	19	24.05	-	-	-
SNCAIP	0	genome.wustl.edu	37	5	121726839	121726839	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	5	121726839	121726839	C	T	SNP	SNCAIP	ENST00000379533	human	ensembl	69_37n	+1	known	missense	c.10	p.P4S	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692	281	0	0.00	205	42	17.00	-	-	-
SP3	0	genome.wustl.edu	37	2	174819671	174819674	+	Frame_Shift_Del	DEL	TGTT	TGTT	-			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	TGTT	TGTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	2	174819671	174819674	TGTT	-	DEL	SP3	ENST00000310015	human	ensembl	69_37n	-1	known	frame_shift_del	c.1569_1566	p.T523fs	1.000:1.000:1.000:1.000	NULL	pfam_Znf_C2H2,superfamily_Galactose-bd-like,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP3	HGNC	ENSG00000172845	86	0	0.00	52	12	18.75	-	-	-
SVIL	0	genome.wustl.edu	37	10	29762771	29762772	+	Frame_Shift_Ins	INS	-	-	C			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	10	29762771	29762772	-	C	INS	SVIL	ENST00000355867	human	ensembl	69_37n	-1	known	frame_shift_ins	c.5525_5524	p.A1842fs	1.000:0.998	pfam_Gelsolin_dom,smart_Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321	41	0	0.00	20	3	13.04	-	-	-
TCEB3	0	genome.wustl.edu	37	1	24078341	24078342	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	1	24078341	24078342	CC	-	DEL	TCEB3	ENST00000418390	human	ensembl	69_37n	+1	known	frame_shift_del	c.1324_1325	p.R443fs	1.000:1.000	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,pfscan_F-box_dom_cyclin-like	-	no_errors	TCEB3	HGNC	ENSG00000011007	32	0	0.00	49	122	71.35	-	-	-
TIE1	0	genome.wustl.edu	37	1	43773137	43773137	+	Silent	SNP	G	G	A			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	1	43773137	43773137	G	A	SNP	TIE1	ENST00000372476	human	ensembl	69_37n	+1	known	silent	c.807	p.Q269	1.000	smart_EGF-like	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EGF-like,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056	102	0	0.00	41	11	21.15	-	-	-
TTN	0	genome.wustl.edu	37	2	179425252	179425252	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	2	179425252	179425252	G	T	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.77903	p.P25968H	0.992	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	103	0	0.00	35	15	30.00	-	-	-
ZNF800	0	genome.wustl.edu	37	7	127026205	127026205	+	Silent	SNP	A	A	G			TCGA-B6-A0IN-01A-11W-A050-09	TCGA-B6-A0IN-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ee2c9198-cea3-4a54-b96b-834a70c30d2f	a4819d1f-61d6-4804-89de-3a3867e8fbbc	7	127026205	127026205	A	G	SNP	ZNF800	ENST00000265827	human	ensembl	69_37n	-1	known	silent	c.66	p.Y22	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF800	HGNC	ENSG00000048405	160	0	0.00	60	31	34.07	-	-	-
