Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ATP4A	0	genome.wustl.edu	37	19	36051382	36051382	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	19	36051382	36051382	C	T	SNP	ATP4A	ENST00000262623	human	ensembl	69_37n	-1	known	missense	c.670	p.V224M	1.000	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_cation-ex_asu_euk	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP4A	HGNC	ENSG00000105675	150	0	0.00	75	63	45.65	-	-	-
C1orf86	0	genome.wustl.edu	37	1	2125495	2125495	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	1	2125495	2125495	A	G	SNP	C1orf86	ENST00000378545	human	ensembl	69_37n	-1	known	missense	c.449	p.V150A	0.000	NULL	NULL	-	no_errors	C1orf86	HGNC	ENSG00000162585	18	0	0.00	16	6	27.27	-	-	-
CCP110	0	genome.wustl.edu	37	16	19554266	19554266	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	16	19554266	19554266	C	A	SNP	CCP110	ENST00000381396	human	ensembl	69_37n	+1	known	missense	c.2434	p.R812S	1.000	NULL	NULL	-	no_errors	CCP110	HGNC	ENSG00000103540	481	1	0.21	580	70	10.77	-	-	-
CD68	0	genome.wustl.edu	37	17	7484092	7484092	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	17	7484092	7484092	C	G	SNP	CD68	ENST00000250092	human	ensembl	69_37n	+1	known	missense	c.751	p.H251D	0.000	pfam_Lysosome-assoc_membr_glycop	pfam_Lysosome-assoc_membr_glycop,prints_Lysosome-assoc_membr_glycop	-	no_errors	CD68	HGNC	ENSG00000129226	105	0	0.00	62	51	45.13	-	-	-
CDH8	0	genome.wustl.edu	37	16	61689592	61689592	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	16	61689592	61689592	C	G	SNP	CDH8	ENST00000577390	human	ensembl	69_37n	-1	known	missense	c.1688	p.G563A	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394	306	0	0.00	136	17	11.11	-	-	-
CLIP1	0	genome.wustl.edu	37	12	122825568	122825568	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	12	122825568	122825568	A	G	SNP	CLIP1	ENST00000540338	human	ensembl	69_37n	-1	known	missense	c.2183	p.M728T	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Znf_CCHC,superfamily_Prefoldin,pfscan_CAP-Gly_domain	-	no_errors	CLIP1	HGNC	ENSG00000130779	424	0	0.00	178	148	45.26	-	-	-
CLYBL	0	genome.wustl.edu	37	13	100518497	100518497	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	13	100518497	100518497	C	G	SNP	CLYBL	ENST00000339105	human	ensembl	69_37n	+1	known	missense	c.638	p.A213G	1.000	pfam_Aldehyde-lyase_domain,superfamily_Pyrv/PenolPyrv_Kinase,pirsf_Citrate_lyase_beta	pfam_Aldehyde-lyase_domain,superfamily_Pyrv/PenolPyrv_Kinase,pirsf_Citrate_lyase_beta	-	no_errors	CLYBL	HGNC	ENSG00000125246	131	0	0.00	44	89	66.92	-	-	-
CPT1A	0	genome.wustl.edu	37	11	68579905	68579905	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	11	68579905	68579905	G	A	SNP	CPT1A	ENST00000265641	human	ensembl	69_37n	-1	known	missense	c.281	p.A94V	0.984	NULL	pfam_Carn_acyl_trans	-	no_errors	CPT1A	HGNC	ENSG00000110090	228	1	0.44	127	39	23.49	-	-	-
CUL5	0	genome.wustl.edu	37	11	107925435	107925435	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	11	107925435	107925435	A	G	SNP	CUL5	ENST00000532782	human	ensembl	69_37n	+1	novel	missense	c.304	p.I102V	0.999	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CUL5	HGNC	ENSG00000166266	194	0	0.00	39	50	56.18	-	-	-
DCC	0	genome.wustl.edu	37	18	50432563	50432563	+	Silent	SNP	C	C	A			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	18	50432563	50432563	C	A	SNP	DCC	ENST00000442544	human	ensembl	69_37n	+1	known	silent	c.562	p.R188	0.991	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DCC	HGNC	ENSG00000187323	181	0	0.00	97	66	40.49	-	-	-
GNMT	0	genome.wustl.edu	37	6	42931381	42931381	+	Silent	SNP	T	T	C			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	6	42931381	42931381	T	C	SNP	GNMT	ENST00000372808	human	ensembl	69_37n	+1	known	silent	c.825	p.P275	0.649	pirsf_Gly/Sar_N_MeTrfase	pfam_Methyltransf_12,pfam_Methyltransf_11,pirsf_Gly/Sar_N_MeTrfase	-	no_errors	GNMT	HGNC	ENSG00000124713	151	0	0.00	105	18	14.63	-	-	-
HECW2	0	genome.wustl.edu	37	2	197171902	197171902	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	2	197171902	197171902	C	T	SNP	HECW2	ENST00000260983	human	ensembl	69_37n	-1	known	missense	c.2641	p.A881T	0.201	NULL	pfam_HECT,pfam_WW_Rsp5_WWP,pfam_C2_Ca-dep,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_C2_membr_targeting,pfscan_WW_Rsp5_WWP	-	no_errors	HECW2	HGNC	ENSG00000138411	290	0	0.00	124	118	48.56	-	-	-
IFNG	0	genome.wustl.edu	37	12	68552013	68552013	+	Silent	SNP	A	A	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	12	68552013	68552013	A	G	SNP	IFNG	ENST00000229135	human	ensembl	69_37n	-1	known	silent	c.141	p.D47	0.000	pfam_Interferon_gamma,superfamily_4_helix_cytokine-like_core,pirsf_Interferon_gamma	pfam_Interferon_gamma,superfamily_4_helix_cytokine-like_core,pirsf_Interferon_gamma	-	no_errors	IFNG	HGNC	ENSG00000111537	339	0	0.00	128	112	46.47	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56177058	56177059	+	Frame_Shift_Ins	INS	-	-	GTCA			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	5	56177058	56177059	-	GTCA	INS	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.2328_2329	p.T778fs	0.997:1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	642	0	0.00	485	202	29.40	-	-	-
MDGA2	0	genome.wustl.edu	37	14	47389322	47389322	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	14	47389322	47389322	G	T	SNP	MDGA2	ENST00000399232	human	ensembl	69_37n	-1	known	missense	c.2131	p.P711T	1.000	NULL	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like	-	no_errors	MDGA2	HGNC	ENSG00000139915	310	2	0.64	208	44	17.46	-	-	-
MGAM	0	genome.wustl.edu	37	7	141721528	141721528	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	7	141721528	141721528	A	G	SNP	MGAM	ENST00000549489	human	ensembl	69_37n	+1	known	missense	c.701	p.N234S	0.248	superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	319	0	0.00	92	131	58.74	-	-	-
MLL3	0	genome.wustl.edu	37	7	151845844	151845844	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	7	151845844	151845844	G	-	DEL	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	frame_shift_del	c.13339	p.K4448fs	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	185	0	0.00	73	59	42.75	-	-	-
NAV2	0	genome.wustl.edu	37	11	19955784	19955784	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	11	19955784	19955784	A	G	SNP	NAV2	ENST00000396087	human	ensembl	69_37n	+1	known	missense	c.2063	p.N688S	0.594	NULL	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	135	0	0.00	56	66	54.10	-	-	-
NT5C1B	0	genome.wustl.edu	37	2	18767558	18767558	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	2	18767558	18767558	A	T	SNP	NT5C1B	ENST00000359846	human	ensembl	69_37n	-1	known	missense	c.400	p.S134T	0.019	NULL	pfam_5-nucleotidase	-	no_errors	NT5C1B	HGNC	ENSG00000185013	294	0	0.00	153	56	26.67	-	-	-
PANK4	0	genome.wustl.edu	37	1	2452259	2452259	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	1	2452259	2452259	T	C	SNP	PANK4	ENST00000378466	human	ensembl	69_37n	-1	known	missense	c.509	p.Q170R	1.000	pfam_Type_II_PanK,pirsf_PanK_long,tigrfam_Type_II_PanK	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC	ENSG00000157881	329	0	0.00	180	63	25.93	-	-	-
PCDHA1	0	genome.wustl.edu	37	5	140167950	140167950	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	5	140167950	140167950	C	T	SNP	PCDHA1	ENST00000504120	human	ensembl	69_37n	+1	known	missense	c.2075	p.A692V	0.005	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970	47	0	0.00	46	9	15.25	-	-	-
PCDHGB6	0	genome.wustl.edu	37	5	140789281	140789281	+	Nonsense_Mutation	SNP	C	C	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	5	140789281	140789281	C	G	SNP	PCDHGB6	ENST00000520790	human	ensembl	69_37n	+1	known	nonsense	c.1512	p.Y504*	0.255	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB6	HGNC	ENSG00000253305	31	0	0.00	23	15	39.47	-	-	-
PRKAR1A	0	genome.wustl.edu	37	17	66511561	66511561	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	17	66511561	66511561	C	T	SNP	PRKAR1A	ENST00000588188	human	ensembl	69_37n	+1	putative	missense	c.19	p.R7C	0.983	pirsf_cAMP_dep_PK_reg_su	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PRKAR1A	HGNC	ENSG00000108946	155	0	0.00	98	62	38.75	-	-	-
PTCHD2	0	genome.wustl.edu	37	1	11589972	11589972	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	1	11589972	11589972	G	A	SNP	PTCHD2	ENST00000294484	human	ensembl	69_37n	+1	known	missense	c.3058	p.V1020I	0.674	NULL	pfam_Patched,pfam_MMPL-typ,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624	133	0	0.00	95	27	22.13	-	-	-
PVRL3	0	genome.wustl.edu	37	3	110831214	110831214	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	3	110831214	110831214	G	C	SNP	PVRL3	ENST00000486596	human	ensembl	69_37n	+1	novel	missense	c.496	p.V166L	0.993	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	-	no_start_codon:pseudogene:no_stop_codon	PVRL3	HGNC	ENSG00000177707	271	0	0.00	141	71	33.49	-	-	-
SLAMF7	0	genome.wustl.edu	37	1	160720169	160720169	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	1	160720169	160720169	T	C	SNP	SLAMF7	ENST00000368043	human	ensembl	69_37n	+1	known	missense	c.725	p.V242A	0.000	NULL	pfam_Ig_V-set,pfscan_Ig-like	-	no_errors	SLAMF7	HGNC	ENSG00000026751	839	1	0.12	460	143	23.68	-	-	-
SLC9A4	0	genome.wustl.edu	37	2	103141501	103141501	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	2	103141501	103141501	T	-	DEL	SLC9A4	ENST00000295269	human	ensembl	69_37n	+1	known	frame_shift_del	c.1837	p.Y613fs	0.999	tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251	195	0	0.00	61	68	50.75	-	-	-
SYNE1	0	genome.wustl.edu	37	6	152804248	152804248	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	6	152804248	152804248	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	69_37n	-1	known	missense	c.1322	p.T441M	0.995	superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	720	0	0.00	338	89	20.84	-	-	-
TMCO6	0	genome.wustl.edu	37	5	140024286	140024286	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	5	140024286	140024286	T	G	SNP	TMCO6	ENST00000252100	human	ensembl	69_37n	+1	known	missense	c.1347	p.S449R	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Importin-a_IBB	-	no_errors	TMCO6	HGNC	ENSG00000113119	116	1	0.85	79	44	35.77	-	-	-
TULP4	0	genome.wustl.edu	37	6	158922767	158922767	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	6	158922767	158922767	T	C	SNP	TULP4	ENST00000367097	human	ensembl	69_37n	+1	known	missense	c.2072	p.I691T	0.769	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	132	0	0.00	76	24	24.00	-	-	-
ZIC5	0	genome.wustl.edu	37	13	100617886	100617886	+	Silent	SNP	C	C	T			TCGA-BH-A18N-01A-11D-A12B-09	TCGA-BH-A18N-11A-43D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	13c38ac4-c410-4602-83e3-9b80b4f93839	a8974cdc-5625-4575-80de-2fcd0671a693	13	100617886	100617886	C	T	SNP	ZIC5	ENST00000267294	human	ensembl	69_37n	-1	novel	silent	c.1737	p.P579	0.052	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC5	HGNC	ENSG00000139800	304	1	0.33	117	180	60.61	-	-	-
