Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AKT3	0	genome.wustl.edu	37	1	243828162	243828162	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	1	243828162	243828162	G	A	SNP	AKT3	ENST00000263826	human	ensembl	69_37n	-1	known	nonsense	c.196	p.R66*	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom	-	no_errors	AKT3	HGNC	ENSG00000117020	311	0	0.00	232	178	43.41	-	-	-
AP2A1	0	genome.wustl.edu	37	19	50302640	50302640	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	19	50302640	50302640	G	C	SNP	AP2A1	ENST00000359032	human	ensembl	69_37n	+1	known	missense	c.1022	p.R341P	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP2_complex_asu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a-adaptin_app_sub_C,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	-	no_errors	AP2A1	HGNC	ENSG00000196961	15	0	0.00	10	7	41.18	-	-	-
ARHGEF7	0	genome.wustl.edu	37	13	111927898	111927898	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	13	111927898	111927898	G	A	SNP	ARHGEF7	ENST00000375741	human	ensembl	69_37n	+1	known	missense	c.1355	p.R452Q	1.000	superfamily_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_CH-domain,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,prints_SH3_domain,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF7	HGNC	ENSG00000102606	150	0	0.00	146	26	15.12	-	-	-
ARID1A	0	genome.wustl.edu	37	1	27057934	27057934	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	1	27057934	27057934	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	69_37n	+1	known	nonsense	c.1642	p.Q548*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	234	0	0.00	140	107	43.32	-	-	-
ASB5	0	genome.wustl.edu	37	4	177138077	177138077	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	4	177138077	177138077	G	-	DEL	ASB5	ENST00000296525	human	ensembl	69_37n	-1	known	frame_shift_del	c.754	p.L252fs	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB5	HGNC	ENSG00000164122	327	0	0.00	248	59	19.16	-	-	-
CDH7	0	genome.wustl.edu	37	18	63547856	63547856	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	18	63547856	63547856	G	A	SNP	CDH7	ENST00000323011	human	ensembl	69_37n	+1	known	missense	c.2084	p.R695Q	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138	194	0	0.00	80	55	40.74	-	-	-
CDK5	0	genome.wustl.edu	37	7	150752460	150752460	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	7	150752460	150752460	C	A	SNP	CDK5	ENST00000485972	human	ensembl	69_37n	-1	known	missense	c.484	p.V162L	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	CDK5	HGNC	ENSG00000164885	77	0	0.00	57	39	40.62	-	-	-
COL6A6	0	genome.wustl.edu	37	3	130285633	130285633	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	3	130285633	130285633	C	T	SNP	COL6A6	ENST00000358511	human	ensembl	69_37n	+1	known	missense	c.1370	p.T457M	0.686	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	132	0	0.00	77	64	45.07	-	-	-
DET1	0	genome.wustl.edu	37	15	89074906	89074906	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	15	89074906	89074906	G	A	SNP	DET1	ENST00000444300	human	ensembl	69_37n	-1	known	nonsense	c.64	p.R22*	1.000	NULL	pfam_De-etiolated_protein_1_Det1	-	no_errors	DET1	HGNC	ENSG00000140543	185	0	0.00	104	34	24.64	-	-	-
DIP2A	0	genome.wustl.edu	37	21	47974150	47974150	+	Silent	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	21	47974150	47974150	G	A	SNP	DIP2A	ENST00000318711	human	ensembl	69_37n	+1	known	silent	c.3102	p.L1034	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305	97	0	0.00	81	23	22.12	-	-	-
DMRTA1	0	genome.wustl.edu	37	9	22451851	22451851	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	9	22451851	22451851	A	T	SNP	DMRTA1	ENST00000325870	human	ensembl	69_37n	+1	known	missense	c.1456	p.S486C	1.000	NULL	pfam_DM_DNA-bd,pfam_DMA,superfamily_DM_DNA-bd,superfamily_UBA-like,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRTA1	HGNC	ENSG00000176399	125	0	0.00	101	25	19.69	-	-	-
ENSG00000248666	0	genome.wustl.edu	37	9	130477768	130477768	+	RNA	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	9	130477768	130477768	G	A	SNP	ENSG00000248666	ENST00000335223	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.041	-	-	-	no_errors	RP11-56D16.2	Clone_based_vega_gene	ENSG00000248666	10	0	0.00	5	10	66.67	-	-	-
FANCA	0	genome.wustl.edu	37	16	89818569	89818569	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	16	89818569	89818569	C	T	SNP	FANCA	ENST00000389301	human	ensembl	69_37n	-1	known	missense	c.3043	p.E1015K	0.000	NULL	pfam_Fanconia,prints_Fanconia	-	no_errors	FANCA	HGNC	ENSG00000187741	126	0	0.00	58	47	44.76	-	-	-
FLNC	0	genome.wustl.edu	37	7	128494721	128494721	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	7	128494721	128494721	G	T	SNP	FLNC	ENST00000325888	human	ensembl	69_37n	+1	known	missense	c.6982	p.V2328L	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	25	0	0.00	18	9	33.33	-	-	-
HERC2P2	0	genome.wustl.edu	37	15	23300098	23300098	+	RNA	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	15	23300098	23300098	C	T	SNP	HERC2P2	ENST00000560464	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P2	HGNC	ENSG00000140181	32	0	0.00	24	6	20.00	-	-	-
ITPR1	0	genome.wustl.edu	37	3	4854831	4854831	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	3	4854831	4854831	G	T	SNP	ITPR1	ENST00000302640	human	ensembl	69_37n	+1	known	missense	c.7429	p.G2477C	0.110	pfam_Ion_trans_dom	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995	209	0	0.00	187	32	14.61	-	-	-
LRRC37A4P	0	genome.wustl.edu	37	17	43592301	43592301	+	RNA	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	17	43592301	43592301	G	A	SNP	LRRC37A4P	ENST00000579913	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LRRC37A4P	HGNC	ENSG00000214425	30	0	0.00	14	5	26.32	-	-	-
NAV3	0	genome.wustl.edu	37	12	78225321	78225321	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	12	78225321	78225321	C	G	SNP	NAV3	ENST00000397909	human	ensembl	69_37n	+1	known	missense	c.80	p.P27R	1.000	superfamily_CH-domain	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	172	0	0.00	68	52	43.33	-	-	-
NFE2	0	genome.wustl.edu	37	12	54686775	54686775	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	12	54686775	54686775	G	A	SNP	NFE2	ENST00000312156	human	ensembl	69_37n	-1	known	missense	c.505	p.R169C	0.731	NULL	pfam_bZIP_1,pfam_bZIP_2,pfam_bZIP_Maf,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2	HGNC	ENSG00000123405	93	0	0.00	53	40	41.24	-	-	-
ODZ1	0	genome.wustl.edu	37	X	123554340	123554340	+	Silent	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	X	123554340	123554340	G	A	SNP	ODZ1	ENST00000422452	human	ensembl	69_37n	-1	known	silent	c.4803	p.G1601	0.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	ODZ1	HGNC	ENSG00000009694	132	0	0.00	132	25	15.82	-	-	-
OTOGL	0	genome.wustl.edu	37	12	80647295	80647295	+	Silent	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	12	80647295	80647295	C	T	SNP	OTOGL	ENST00000458043	human	ensembl	69_37n	+1	known	silent	c.1308	p.C436	0.986	smart_VWC_out	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_AbfB,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	OTOGL	HGNC	ENSG00000165899	493	2	0.40	230	71	23.59	-	-	-
PLEKHM1	0	genome.wustl.edu	37	17	43531287	43531287	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	17	43531287	43531287	G	A	SNP	PLEKHM1	ENST00000430334	human	ensembl	69_37n	-1	known	missense	c.1931	p.P644L	0.000	NULL	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Pleckstrin_homology,pfscan_Run,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PLEKHM1	HGNC	ENSG00000225190	19	0	0.00	22	8	26.67	-	-	-
PNMA1	0	genome.wustl.edu	37	14	74179741	74179741	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	14	74179741	74179741	C	T	SNP	PNMA1	ENST00000316836	human	ensembl	69_37n	-1	known	missense	c.602	p.R201Q	0.998	superfamily_Globin-like	superfamily_Globin-like	-	no_errors	PNMA1	HGNC	ENSG00000176903	13	0	0.00	10	12	54.55	-	-	-
POLR3B	0	genome.wustl.edu	37	12	106850925	106850925	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	12	106850925	106850925	G	A	SNP	POLR3B	ENST00000228347	human	ensembl	69_37n	+1	known	missense	c.2303	p.R768H	1.000	pfam_DNA-dir_RNA_pol_su2_6	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR3B	HGNC	ENSG00000013503	436	0	0.00	239	66	21.64	-	-	-
RUFY1	0	genome.wustl.edu	37	5	178994480	178994481	+	Frame_Shift_Ins	INS	-	-	CGAG			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	5	178994480	178994481	-	CGAG	INS	RUFY1	ENST00000319449	human	ensembl	69_37n	+1	known	frame_shift_ins	c.621_622	p.W209fs	0.998:0.998	pfam_Run,smart_Run,pfscan_Run	pfam_Run,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,smart_Run,smart_Znf_FYVE,pfscan_Run,pfscan_Znf_FYVE-rel,pfscan_Znf_RING	-	no_errors	RUFY1	HGNC	ENSG00000176783	237	0	0.00	214	77	26.46	-	-	-
SLC6A7	0	genome.wustl.edu	37	5	149588999	149588999	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	5	149588999	149588999	G	A	SNP	SLC6A7	ENST00000230671	human	ensembl	69_37n	+1	known	missense	c.1732	p.D578N	1.000	NULL	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A7	HGNC	ENSG00000011083	22	0	0.00	14	7	33.33	-	-	-
TEX13A	0	genome.wustl.edu	37	X	104464131	104464131	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	X	104464131	104464131	G	A	SNP	TEX13A	ENST00000413579	human	ensembl	69_37n	-1	known	missense	c.745	p.L249F	0.000	NULL	pfam_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	TEX13A	HGNC	ENSG00000133149	150	0	0.00	133	57	30.00	-	-	-
TRMT44	0	genome.wustl.edu	37	4	8469962	8469962	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	4	8469962	8469962	C	T	SNP	TRMT44	ENST00000389737	human	ensembl	69_37n	+1	known	nonsense	c.1816	p.R606*	0.723	NULL	pfam_tRNA_uracil_MeTrfase	-	no_errors	TRMT44	HGNC	ENSG00000155275	106	0	0.00	72	10	12.20	-	-	-
TSPAN17	0	genome.wustl.edu	37	5	176078754	176078754	+	Splice_Site	SNP	G	G	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	5	176078754	176078754	G	A	SNP	TSPAN17	ENST00000310032	human	ensembl	69_37n	+1	known	splice_site	c.139-1	e3-1	1.000	-	-	-	no_errors	TSPAN17	HGNC	ENSG00000048140	179	1	0.56	195	27	12.11	-	-	-
TTI1	0	genome.wustl.edu	37	20	36641436	36641436	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	20	36641436	36641436	T	A	SNP	TTI1	ENST00000373447	human	ensembl	69_37n	-1	known	missense	c.783	p.K261N	0.155	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407	316	1	0.31	258	130	33.51	-	-	-
TYK2	0	genome.wustl.edu	37	19	10475348	10475348	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	19	10475348	10475348	C	T	SNP	TYK2	ENST00000264818	human	ensembl	69_37n	-1	known	missense	c.1309	p.E437K	0.986	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak/Tyk2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_TYK2_N	-	no_errors	TYK2	HGNC	ENSG00000105397	20	0	0.00	16	7	30.43	-	-	-
ZNF577	0	genome.wustl.edu	37	19	52381767	52381767	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	19	52381767	52381767	C	A	SNP	ZNF577	ENST00000301399	human	ensembl	69_37n	-1	known	missense	c.62	p.G21V	0.000	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF577	HGNC	ENSG00000161551	173	0	0.00	136	59	30.26	-	-	-
ZNF831	0	genome.wustl.edu	37	20	57782030	57782030	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A1EO-01A-11D-A135-09	TCGA-BH-A1EO-11A-31D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	20131381-8a11-425d-8954-980e6ec7c427	cb2284f3-6d08-40ec-bf36-dfa349354c59	20	57782030	57782030	C	T	SNP	ZNF831	ENST00000371030	human	ensembl	69_37n	+1	novel	nonsense	c.3946	p.R1316*	0.005	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	66	0	0.00	56	27	32.14	-	-	-
