Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AKAP1	0	genome.wustl.edu	37	17	55183615	55183615	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	17	55183615	55183615	G	C	SNP	AKAP1	ENST00000337714	human	ensembl	69_37n	+1	known	missense	c.790	p.A264P	0.001	NULL	pfam_Tudor,pfam_KH_dom_type_1,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	AKAP1	HGNC	ENSG00000121057	129	0	0.00	358	103	22.34	-	-	-
AKR1B1	0	genome.wustl.edu	37	7	134136358	134136358	+	Nonsense_Mutation	SNP	C	C	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	7	134136358	134136358	C	A	SNP	AKR1B1	ENST00000285930	human	ensembl	69_37n	-1	known	nonsense	c.214	p.E72*	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1B1	HGNC	ENSG00000085662	50	0	0.00	123	37	23.12	-	-	-
ALDH1L2	0	genome.wustl.edu	37	12	105443688	105443688	+	Nonsense_Mutation	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	12	105443688	105443688	G	A	SNP	ALDH1L2	ENST00000258494	human	ensembl	69_37n	-1	known	nonsense	c.1684	p.Q562*	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L2	HGNC	ENSG00000136010	141	0	0.00	78	15	16.13	-	-	-
ANKRD27	0	genome.wustl.edu	37	19	33134217	33134217	+	Silent	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	19	33134217	33134217	G	A	SNP	ANKRD27	ENST00000306065	human	ensembl	69_37n	-1	known	silent	c.681	p.Y227	0.594	NULL	pfam_Ankyrin_rpt,pfam_VPS9,superfamily_Ankyrin_rpt-contain_dom,smart_VPS9_subgr,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_VPS9,prints_Ankyrin_rpt	-	no_errors	ANKRD27	HGNC	ENSG00000105186	174	0	0.00	122	33	21.29	-	-	-
ASH1L	0	genome.wustl.edu	37	1	155348180	155348182	+	Frame_Shift_Del	DEL	TCT	TCT	-			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	1	155348180	155348182	TCT	-	DEL	ASH1L	ENST00000368346	human	ensembl	69_37n	-1	known	frame_shift_del	c.6239	p.N2080fs	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	131	0	0.00	176	29	14.15	-	-	-
CCDC73	0	genome.wustl.edu	37	11	32636346	32636346	+	Silent	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	11	32636346	32636346	C	T	SNP	CCDC73	ENST00000335185	human	ensembl	69_37n	-1	known	silent	c.1518	p.T506	0.004	NULL	NULL	-	no_errors	CCDC73	HGNC	ENSG00000186714	188	0	0.00	114	75	39.68	-	-	-
CCDC82	0	genome.wustl.edu	37	11	96117839	96117839	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	11	96117839	96117839	C	A	SNP	CCDC82	ENST00000278520	human	ensembl	69_37n	-1	known	missense	c.73	p.D25Y	1.000	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231	256	0	0.00	125	58	31.69	-	-	-
CCNT1	0	genome.wustl.edu	37	12	49089558	49089558	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	12	49089558	49089558	C	T	SNP	CCNT1	ENST00000261900	human	ensembl	69_37n	-1	known	missense	c.761	p.R254H	1.000	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNT1	HGNC	ENSG00000129315	271	1	0.37	127	25	16.45	-	-	-
CDH12	0	genome.wustl.edu	37	5	21802509	21802509	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	5	21802509	21802509	C	G	SNP	CDH12	ENST00000382254	human	ensembl	69_37n	-1	known	missense	c.1023	p.K341N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162	110	0	0.00	57	26	31.33	-	-	-
CHD3	0	genome.wustl.edu	37	17	7801857	7801859	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	17	7801857	7801859	AAG	-	DEL	CHD3	ENST00000330494	human	ensembl	69_37n	+1	known	in_frame_del	c.2095_2097	p.K702in_frame_del	1.000:1.000:1.000	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	107	1	0.92	72	20	21.74	-	-	-
CPSF1	0	genome.wustl.edu	37	8	145620395	145620395	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	8	145620395	145620395	C	T	SNP	CPSF1	ENST00000349769	human	ensembl	69_37n	-1	known	missense	c.3190	p.E1064K	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894	37	0	0.00	52	80	60.61	-	-	-
CSGALNACT1	0	genome.wustl.edu	37	8	19277864	19277864	+	Silent	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	8	19277864	19277864	C	T	SNP	CSGALNACT1	ENST00000311540	human	ensembl	69_37n	-1	known	silent	c.1119	p.L373	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408	94	0	0.00	70	25	26.32	-	-	-
DNAH9	0	genome.wustl.edu	37	17	11572453	11572453	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	17	11572453	11572453	C	T	SNP	DNAH9	ENST00000262442	human	ensembl	69_37n	+1	known	missense	c.2804	p.P935L	0.999	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	154	0	0.00	90	34	27.42	-	-	-
EHD2	0	genome.wustl.edu	37	19	48239666	48239666	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	19	48239666	48239666	C	T	SNP	EHD2	ENST00000263277	human	ensembl	69_37n	+1	known	missense	c.956	p.P319L	1.000	NULL	pfam_Dynamin_GTPase,smart_EPS15_homology,pfscan_EF_HAND_2,pfscan_EPS15_homology	-	no_errors	EHD2	HGNC	ENSG00000024422	85	0	0.00	130	39	22.94	-	-	-
ERV3-1	0	genome.wustl.edu	37	7	64453178	64453178	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	7	64453178	64453178	C	T	SNP	ERV3-1	ENST00000394323	human	ensembl	69_37n	-1	known	missense	c.227	p.G76D	0.828	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462	115	0	0.00	143	50	25.77	-	-	-
EYA1	0	genome.wustl.edu	37	8	72234498	72234498	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	8	72234498	72234498	C	T	SNP	EYA1	ENST00000340726	human	ensembl	69_37n	-1	known	missense	c.208	p.G70R	1.000	NULL	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313	199	0	0.00	260	39	13.00	-	-	-
GATA3	0	genome.wustl.edu	37	10	8111513	8111514	+	Frame_Shift_Ins	INS	-	-	G			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	10	8111513	8111514	-	G	INS	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1002_1003	p.D335fs	0.859:1.000	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	81	0	0.00	162	92	36.22	-	-	-
L3MBTL1	0	genome.wustl.edu	37	20	42164575	42164575	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	20	42164575	42164575	C	T	SNP	L3MBTL1	ENST00000418998	human	ensembl	69_37n	+1	known	missense	c.1858	p.R620W	1.000	pfam_Znf_C2HC	pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt	-	no_errors	L3MBTL1	HGNC	ENSG00000185513	57	0	0.00	89	25	21.93	-	-	-
LLGL1	0	genome.wustl.edu	37	17	18145941	18145941	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	17	18145941	18145941	G	C	SNP	LLGL1	ENST00000316843	human	ensembl	69_37n	+1	known	missense	c.3115	p.G1039R	1.000	NULL	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Lethal2_giant,pfscan_WD40_repeat	-	no_errors	LLGL1	HGNC	ENSG00000131899	10	0	0.00	22	19	46.34	-	-	-
MAGI3	0	genome.wustl.edu	37	1	114184725	114184725	+	Nonsense_Mutation	SNP	C	C	G			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	1	114184725	114184725	C	G	SNP	MAGI3	ENST00000369611	human	ensembl	69_37n	+1	known	nonsense	c.1553	p.S518*	0.963	NULL	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI3	HGNC	ENSG00000081026	165	0	0.00	165	52	23.96	-	-	-
MORN1	0	genome.wustl.edu	37	1	2268205	2268205	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	1	2268205	2268205	G	A	SNP	MORN1	ENST00000378531	human	ensembl	69_37n	-1	known	missense	c.1121	p.P374L	0.347	NULL	pfam_MORN,smart_MORN	-	no_errors	MORN1	HGNC	ENSG00000116151	9	0	0.00	9	13	56.52	-	-	-
MSN	0	genome.wustl.edu	37	X	64955188	64955188	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	X	64955188	64955188	G	A	SNP	MSN	ENST00000360270	human	ensembl	69_37n	+1	known	missense	c.855	p.M285I	1.000	pirsf_ERM,pfam_FERM_PH-like_C,prints_Ez/rad/moesin,pfscan_FERM_domain	pirsf_ERM,pfam_ERM_C,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin,smart_Band_41_domain,prints_Ez/rad/moesin,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	MSN	HGNC	ENSG00000147065	93	0	0.00	159	72	31.17	-	-	-
NCAM1	0	genome.wustl.edu	37	11	113130919	113130919	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	11	113130919	113130919	G	A	SNP	NCAM1	ENST00000316851	human	ensembl	69_37n	+1	known	missense	c.1975	p.V659I	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,prints_Neural_cell_adh,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	NCAM1	HGNC	ENSG00000149294	121	0	0.00	115	60	34.29	-	-	-
OSBPL2	0	genome.wustl.edu	37	20	60859166	60859166	+	Missense_Mutation	SNP	T	T	G			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	20	60859166	60859166	T	G	SNP	OSBPL2	ENST00000313733	human	ensembl	69_37n	+1	known	missense	c.937	p.S313A	0.013	pfam_Oxysterol-bd	pfam_Oxysterol-bd	-	no_errors	OSBPL2	HGNC	ENSG00000130703	116	0	0.00	161	42	20.69	-	-	-
PDE4B	0	genome.wustl.edu	37	1	66838015	66838015	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	1	66838015	66838015	T	C	SNP	PDE4B	ENST00000329654	human	ensembl	69_37n	+1	known	missense	c.1865	p.I622T	1.000	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4B	HGNC	ENSG00000184588	31	0	0.00	55	18	24.66	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	123	0	0.00	107	85	44.27	-	-	-
POM121	0	genome.wustl.edu	37	7	72413723	72413724	+	In_Frame_Ins	INS	-	-	CTC			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	7	72413723	72413724	-	CTC	INS	POM121	ENST00000434423	human	ensembl	69_37n	+1	known	in_frame_ins	c.3191_3192	p.1065in_frame_insS	0.980:0.870	NULL	NULL	-	no_errors	POM121	HGNC	ENSG00000196313	8	0	0.00	24	10	29.41	-	-	-
RANBP3	0	genome.wustl.edu	37	19	5925701	5925701	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	19	5925701	5925701	G	C	SNP	RANBP3	ENST00000340578	human	ensembl	69_37n	-1	known	missense	c.861	p.H287Q	0.988	NULL	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	-	no_errors	RANBP3	HGNC	ENSG00000031823	39	0	0.00	99	28	22.05	-	-	-
RPS6KA5	0	genome.wustl.edu	37	14	91341643	91341643	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	14	91341643	91341643	C	T	SNP	RPS6KA5	ENST00000261991	human	ensembl	69_37n	-1	known	missense	c.1898	p.S633N	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Aminoglycoside_PTrfase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_AGC-kinase_C,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom	-	no_errors	RPS6KA5	HGNC	ENSG00000100784	126	0	0.00	57	22	27.85	-	-	-
RYR2	0	genome.wustl.edu	37	1	237608817	237608817	+	Silent	SNP	T	T	C			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	1	237608817	237608817	T	C	SNP	RYR2	ENST00000360064	human	ensembl	69_37n	+1	known	silent	c.1281	p.F427	0.994	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	409	0	0.00	219	95	29.78	-	-	-
SCN8A	0	genome.wustl.edu	37	12	52082854	52082854	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	12	52082854	52082854	C	T	SNP	SCN8A	ENST00000550891	human	ensembl	69_37n	+1	novel	missense	c.680	p.A227V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,prints_Na_channel_a8su	-	no_errors	SCN8A	HGNC	ENSG00000196876	53	0	0.00	50	18	26.47	-	-	-
SCYL3	0	genome.wustl.edu	37	1	169823868	169823868	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	1	169823868	169823868	T	C	SNP	SCYL3	ENST00000367770	human	ensembl	69_37n	-1	known	missense	c.1712	p.D571G	0.990	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_HEAT_type_2,pfscan_Prot_kinase_cat_dom	-	no_errors	SCYL3	HGNC	ENSG00000000457	76	0	0.00	33	16	32.00	-	-	-
SH3KBP1	0	genome.wustl.edu	37	X	19854375	19854375	+	Silent	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	X	19854375	19854375	G	A	SNP	SH3KBP1	ENST00000397821	human	ensembl	69_37n	-1	known	silent	c.30	p.Y10	1.000	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SH3KBP1	HGNC	ENSG00000147010	145	0	0.00	169	72	29.75	-	-	-
SMPD2	0	genome.wustl.edu	37	6	109763931	109763931	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	6	109763931	109763931	G	A	SNP	SMPD2	ENST00000458487	human	ensembl	69_37n	+1	putative	missense	c.158	p.R53H	0.029	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SMPD2	HGNC	ENSG00000135587	64	0	0.00	91	16	14.95	-	-	-
TCF4	0	genome.wustl.edu	37	18	52896202	52896202	+	Silent	SNP	G	G	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	18	52896202	52896202	G	A	SNP	TCF4	ENST00000398339	human	ensembl	69_37n	-1	known	silent	c.2061	p.N687	0.998	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	TCF4	HGNC	ENSG00000196628	56	0	0.00	197	38	16.17	-	-	-
TRIM64B	0	genome.wustl.edu	37	11	89604106	89604106	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	11	89604106	89604106	C	A	SNP	TRIM64B	ENST00000329862	human	ensembl	69_37n	-1	known	missense	c.1033	p.D345Y	0.884	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM64B	HGNC	ENSG00000189253	268	0	0.00	127	18	12.41	-	-	-
YIF1A	0	genome.wustl.edu	37	11	66055109	66055109	+	Silent	SNP	G	G	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	11	66055109	66055109	G	T	SNP	YIF1A	ENST00000376901	human	ensembl	69_37n	-1	known	silent	c.387	p.P129	0.696	pfam_Hrf1	pfam_Hrf1,pfam_Yip1	-	no_errors	YIF1A	HGNC	ENSG00000174851	42	0	0.00	42	9	17.65	-	-	-
ZBTB40	0	genome.wustl.edu	37	1	22839582	22839582	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12U-01A-11D-A10Y-09	TCGA-C8-A12U-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	444a1ef9-819a-41dc-baef-22057225efcd	e7b0ba1b-04c8-48f1-ba7d-844ae3f70916	1	22839582	22839582	C	T	SNP	ZBTB40	ENST00000375647	human	ensembl	69_37n	+1	known	missense	c.2627	p.A876V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB40	HGNC	ENSG00000184677	42	0	0.00	93	28	23.14	-	-	-
