Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AP2M1	0	genome.wustl.edu	37	3	183900729	183900729	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	183900729	183900729	T	C	SNP	AP2M1	ENST00000442686	human	ensembl	69_37n	+1	putative	missense	c.316	p.C106R	0.000	pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_start_codon	AP2M1	HGNC	ENSG00000161203	8	0	0.00	2	12	85.71	-	-	-
ATOH1	0	genome.wustl.edu	37	4	94751069	94751069	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	4	94751069	94751069	C	T	SNP	ATOH1	ENST00000306011	human	ensembl	69_37n	+1	known	missense	c.992	p.S331L	0.998	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	ATOH1	HGNC	ENSG00000172238	8	0	0.00	5	4	44.44	-	-	-
BRWD1	0	genome.wustl.edu	37	21	40570878	40570878	+	Missense_Mutation	SNP	A	A	C			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	21	40570878	40570878	A	C	SNP	BRWD1	ENST00000333229	human	ensembl	69_37n	-1	known	missense	c.5464	p.S1822A	0.999	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	BRWD1	HGNC	ENSG00000185658	143	0	0.00	126	20	13.70	-	-	-
CACNA2D3	0	genome.wustl.edu	37	3	55107854	55107854	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	55107854	55107854	C	T	SNP	CACNA2D3	ENST00000288197	human	ensembl	69_37n	+1	known	missense	c.3151	p.R1051C	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445	85	0	0.00	121	27	18.24	-	-	-
CCDC135	0	genome.wustl.edu	37	16	57752290	57752290	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	16	57752290	57752290	G	A	SNP	CCDC135	ENST00000360716	human	ensembl	69_37n	+1	known	missense	c.1109	p.R370K	0.989	NULL	NULL	-	no_errors	CCDC135	HGNC	ENSG00000159625	98	0	0.00	199	31	13.48	-	-	-
CCDC136	0	genome.wustl.edu	37	7	128452972	128452972	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	7	128452972	128452972	G	A	SNP	CCDC136	ENST00000297788	human	ensembl	69_37n	+1	known	missense	c.2752	p.D918N	0.719	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596	28	0	0.00	54	11	16.92	-	-	-
CD163L1	0	genome.wustl.edu	37	12	7521559	7521559	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	12	7521559	7521559	G	T	SNP	CD163L1	ENST00000313599	human	ensembl	69_37n	-1	known	missense	c.4042	p.Q1348K	0.043	superfamily_Srcr_rcpt-rel	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Srcr_rcpt	-	no_errors	CD163L1	HGNC	ENSG00000177675	134	0	0.00	303	64	17.39	-	-	-
CD19	0	genome.wustl.edu	37	16	28948420	28948420	+	Silent	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	16	28948420	28948420	G	A	SNP	CD19	ENST00000538922	human	ensembl	69_37n	+1	known	silent	c.1161	p.A387	0.217	NULL	smart_Ig_sub,pfscan_Ig-like	-	no_errors	CD19	HGNC	ENSG00000177455	9	0	0.00	24	17	41.46	-	-	-
CD84	0	genome.wustl.edu	37	1	160519760	160519760	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	1	160519760	160519760	A	T	SNP	CD84	ENST00000311224	human	ensembl	69_37n	-1	known	missense	c.919	p.S307T	0.000	NULL	smart_Ig_sub,pfscan_Ig-like	-	no_errors	CD84	HGNC	ENSG00000066294	77	0	0.00	76	21	21.65	-	-	-
CDK12	0	genome.wustl.edu	37	17	37682239	37682239	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	17	37682239	37682239	C	T	SNP	CDK12	ENST00000447079	human	ensembl	69_37n	+1	known	missense	c.3430	p.P1144S	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	27	0	0.00	131	17	11.49	-	-	-
CNTN3	0	genome.wustl.edu	37	3	74418526	74418526	+	Splice_Site	SNP	T	T	C			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	74418526	74418526	T	C	SNP	CNTN3	ENST00000263665	human	ensembl	69_37n	-1	known	splice_site	c.762-2	e7-2	1.000	-	-	-	no_errors	CNTN3	HGNC	ENSG00000113805	33	0	0.00	29	5	14.71	-	-	-
COL6A6	0	genome.wustl.edu	37	3	130313159	130313159	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	130313159	130313159	G	A	SNP	COL6A6	ENST00000358511	human	ensembl	69_37n	+1	known	missense	c.4505	p.R1502H	0.003	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	84	0	0.00	56	15	21.13	-	-	-
CXCL6	0	genome.wustl.edu	37	4	74702958	74702958	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	4	74702958	74702958	C	T	SNP	CXCL6	ENST00000226317	human	ensembl	69_37n	+1	known	missense	c.281	p.P94L	1.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXCL8/IL8,prints_Chemokine_CXC	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXCL8/IL8,prints_Chemokine_CXC	-	no_errors	CXCL6	HGNC	ENSG00000124875	267	0	0.00	183	56	23.43	-	-	-
F2RL1	0	genome.wustl.edu	37	5	76128711	76128711	+	Silent	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	5	76128711	76128711	C	T	SNP	F2RL1	ENST00000296677	human	ensembl	69_37n	+1	known	silent	c.279	p.N93	0.952	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_Pro_rcpt_2,prints_Protea_act_rcpt,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	F2RL1	HGNC	ENSG00000164251	123	0	0.00	146	32	17.98	-	-	-
GAB3	0	genome.wustl.edu	37	X	153924213	153924213	+	Silent	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	X	153924213	153924213	G	A	SNP	GAB3	ENST00000424127	human	ensembl	69_37n	-1	known	silent	c.1509	p.D503	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB3	HGNC	ENSG00000160219	202	0	0.00	114	21	15.56	-	-	-
GON4L	0	genome.wustl.edu	37	1	155823258	155823258	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	1	155823258	155823258	A	G	SNP	GON4L	ENST00000368331	human	ensembl	69_37n	-1	known	missense	c.314	p.L105P	0.017	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	133	0	0.00	86	94	52.22	-	-	-
HIST3H3	0	genome.wustl.edu	37	1	228612911	228612911	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	1	228612911	228612911	G	A	SNP	HIST3H3	ENST00000366696	human	ensembl	69_37n	-1	known	missense	c.116	p.P39L	1.000	superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST3H3	HGNC	ENSG00000168148	21	0	0.00	35	18	33.96	-	-	-
IFT88	0	genome.wustl.edu	37	13	21165111	21165111	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	13	21165111	21165111	G	T	SNP	IFT88	ENST00000319980	human	ensembl	69_37n	+1	known	missense	c.243	p.K81N	1.000	NULL	pfam_TPR-1,pfam_TPR_2,pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat,smart_Sel1-like,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFT88	HGNC	ENSG00000032742	315	0	0.00	75	60	44.44	-	-	-
IRF3	0	genome.wustl.edu	37	19	50163080	50163080	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	19	50163080	50163080	G	A	SNP	IRF3	ENST00000309877	human	ensembl	69_37n	-1	known	missense	c.1109	p.T370M	0.669	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF3	HGNC	ENSG00000126456	47	0	0.00	103	54	34.39	-	-	-
ITGA5	0	genome.wustl.edu	37	12	54799461	54799461	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	12	54799461	54799461	C	T	SNP	ITGA5	ENST00000293379	human	ensembl	69_37n	-1	known	missense	c.1003	p.V335I	0.057	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA5	HGNC	ENSG00000161638	52	0	0.00	87	19	17.92	-	-	-
ITIH3	0	genome.wustl.edu	37	3	52833413	52833413	+	Missense_Mutation	SNP	T	T	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	52833413	52833413	T	A	SNP	ITIH3	ENST00000449956	human	ensembl	69_37n	+1	known	missense	c.815	p.F272Y	1.000	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH3	HGNC	ENSG00000162267	55	0	0.00	144	30	17.24	-	-	-
KIAA1191	0	genome.wustl.edu	37	5	175782616	175782616	+	Frame_Shift_Del	DEL	C	C	-			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	5	175782616	175782616	C	-	DEL	KIAA1191	ENST00000298569	human	ensembl	69_37n	-1	known	frame_shift_del	c.165	p.W55fs	1.000	NULL	NULL	-	no_errors	KIAA1191	HGNC	ENSG00000122203	20	0	0.00	43	6	12.00	-	-	-
KIAA1210	0	genome.wustl.edu	37	X	118223625	118223625	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	X	118223625	118223625	C	T	SNP	KIAA1210	ENST00000402510	human	ensembl	69_37n	-1	known	missense	c.1568	p.R523Q	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423	350	1	0.28	192	187	49.34	-	-	-
KLHDC8B	0	genome.wustl.edu	37	3	49212375	49212375	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	49212375	49212375	G	C	SNP	KLHDC8B	ENST00000332780	human	ensembl	69_37n	+1	known	missense	c.742	p.V248L	1.000	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC8B	HGNC	ENSG00000185909	42	0	0.00	113	20	15.04	-	-	-
LRRC7	0	genome.wustl.edu	37	1	70505050	70505050	+	Silent	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	1	70505050	70505050	C	T	SNP	LRRC7	ENST00000035383	human	ensembl	69_37n	+1	known	silent	c.3429	p.Y1143	0.988	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122	30	0	0.00	33	7	17.50	-	-	-
NLGN3	0	genome.wustl.edu	37	X	70375070	70375070	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	X	70375070	70375070	G	A	SNP	NLGN3	ENST00000358741	human	ensembl	69_37n	+1	known	missense	c.584	p.R195Q	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338	48	0	0.00	60	18	23.08	-	-	-
NOS2	0	genome.wustl.edu	37	17	26087691	26087691	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	17	26087691	26087691	G	T	SNP	NOS2	ENST00000313735	human	ensembl	69_37n	-1	known	missense	c.2968	p.R990S	1.000	pfam_OxRdtase_FAD/NAD-bd,pirsf_NOS_met,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_met,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS2	HGNC	ENSG00000007171	18	0	0.00	81	15	15.62	-	-	-
ODZ1	0	genome.wustl.edu	37	X	123805670	123805670	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	X	123805670	123805670	C	T	SNP	ODZ1	ENST00000422452	human	ensembl	69_37n	-1	known	missense	c.1031	p.G344D	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	ODZ1	HGNC	ENSG00000009694	108	0	0.00	68	61	47.29	-	-	-
ODZ1	0	genome.wustl.edu	37	X	123805671	123805671	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	X	123805671	123805671	C	G	SNP	ODZ1	ENST00000422452	human	ensembl	69_37n	-1	known	missense	c.1030	p.G344R	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	ODZ1	HGNC	ENSG00000009694	109	0	0.00	69	61	46.92	-	-	-
PCDHB7	0	genome.wustl.edu	37	5	140553707	140553707	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	5	140553707	140553707	C	A	SNP	PCDHB7	ENST00000231137	human	ensembl	69_37n	+1	known	missense	c.1291	p.L431M	0.992	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	85	0	0.00	86	27	23.68	-	-	-
POR	0	genome.wustl.edu	37	7	75609818	75609819	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	7	75609818	75609819	AG	-	DEL	POR	ENST00000447222	human	ensembl	69_37n	+1	putative	frame_shift_del	c.445_446	p.D150fs	0.002:0.000	pfscan_Flavodoxin/NO_synth	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	POR	HGNC	ENSG00000127948	8	0	0.00	14	19	54.29	-	-	-
PPM1H	0	genome.wustl.edu	37	12	63042362	63042362	+	Silent	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	12	63042362	63042362	G	A	SNP	PPM1H	ENST00000228705	human	ensembl	69_37n	-1	known	silent	c.1452	p.D484	1.000	superfamily_PP2C-like,smart_PP2C-like	pfam_PP2C-like,superfamily_PP2C-like,smart_PP2C-like	-	no_errors	PPM1H	HGNC	ENSG00000111110	73	0	0.00	137	27	16.46	-	-	-
PRPF38A	0	genome.wustl.edu	37	1	52871475	52871475	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	1	52871475	52871475	A	G	SNP	PRPF38A	ENST00000257181	human	ensembl	69_37n	+1	known	missense	c.254	p.D85G	1.000	pfam_PRP38	pfam_PRP38	-	no_errors	PRPF38A	HGNC	ENSG00000134748	160	0	0.00	99	15	13.16	-	-	-
RNF133	0	genome.wustl.edu	37	7	122338886	122338889	+	Frame_Shift_Del	DEL	CTGA	CTGA	-			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	CTGA	CTGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	7	122338886	122338889	CTGA	-	DEL	RNF133	ENST00000340112	human	ensembl	69_37n	-1	known	frame_shift_del	c.87_84	p.S28fs	0.512:0.531:0.719:0.713	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF133	HGNC	ENSG00000188050	25	0	0.00	26	3	10.34	-	-	-
RNF144A	0	genome.wustl.edu	37	2	7164587	7164587	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	2	7164587	7164587	G	A	SNP	RNF144A	ENST00000432850	human	ensembl	69_37n	+1	putative	missense	c.584	p.R195H	0.001	pfam_Znf_C6HC,smart_Znf_C6HC	pfam_Znf_C6HC,smart_Znf_C6HC,pfscan_Znf_RING	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	RNF144A	HGNC	ENSG00000151692	21	0	0.00	27	18	39.13	-	-	-
ROBO1	0	genome.wustl.edu	37	3	78666899	78666899	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	78666899	78666899	C	G	SNP	ROBO1	ENST00000464233	human	ensembl	69_37n	-1	known	missense	c.4168	p.V1390L	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO1	HGNC	ENSG00000169855	45	0	0.00	80	16	16.67	-	-	-
SKIL	0	genome.wustl.edu	37	3	170078980	170078980	+	Silent	SNP	G	G	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	170078980	170078980	G	T	SNP	SKIL	ENST00000259119	human	ensembl	69_37n	+1	known	silent	c.861	p.P287	0.002	pfam_c-SKI_SMAD4-bd_dom,superfamily_SAND_dom-like	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKIL	HGNC	ENSG00000136603	124	0	0.00	164	36	18.00	-	-	-
SKOR1	0	genome.wustl.edu	37	15	68118406	68118406	+	Silent	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	15	68118406	68118406	G	A	SNP	SKOR1	ENST00000380035	human	ensembl	69_37n	+1	known	silent	c.240	p.T80	0.991	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_Transform_Ski,pfam_c-SKI_SMAD4-bd_dom,superfamily_DNA-bd_dom_put,superfamily_SAND_dom-like	-	no_errors	SKOR1	HGNC	ENSG00000188779	18	0	0.00	34	8	19.05	-	-	-
SMC4	0	genome.wustl.edu	37	3	160146661	160146661	+	Missense_Mutation	SNP	T	T	G			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	160146661	160146661	T	G	SNP	SMC4	ENST00000344722	human	ensembl	69_37n	+1	known	missense	c.2726	p.I909R	1.000	pfam_RecF/RecN/SMC,superfamily_Prefoldin	pfam_RecF/RecN/SMC,pfam_SMC_hinge,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810	171	0	0.00	105	22	17.32	-	-	-
SMG1	0	genome.wustl.edu	37	16	18830918	18830918	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	16	18830918	18830918	G	T	SNP	SMG1	ENST00000389467	human	ensembl	69_37n	-1	known	missense	c.9803	p.A3268D	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106	69	0	0.00	141	29	17.06	-	-	-
TP53	0	genome.wustl.edu	37	17	7578272	7578272	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	17	7578272	7578272	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.577	p.H193Y	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	110	0	0.00	69	123	64.06	-	-	-
TTN	0	genome.wustl.edu	37	2	179477701	179477701	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	2	179477701	179477701	T	C	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.42043	p.I14015V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	121	0	0.00	159	27	14.52	-	-	-
TTN	0	genome.wustl.edu	37	2	179611635	179611635	+	Silent	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	2	179611635	179611635	G	A	SNP	TTN	ENST00000360870	human	ensembl	69_37n	-1	known	silent	c.15492	p.S5164	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	139	0	0.00	104	33	24.09	-	-	-
UBR4	0	genome.wustl.edu	37	1	19481474	19481474	+	Silent	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	1	19481474	19481474	G	A	SNP	UBR4	ENST00000375267	human	ensembl	69_37n	-1	known	silent	c.6396	p.F2132	0.998	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	73	0	0.00	151	18	10.65	-	-	-
WDR49	0	genome.wustl.edu	37	3	167223187	167223187	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	3	167223187	167223187	T	C	SNP	WDR49	ENST00000308378	human	ensembl	69_37n	-1	known	missense	c.1736	p.D579G	0.282	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR49	HGNC	ENSG00000174776	220	0	0.00	39	13	25.00	-	-	-
WDR78	0	genome.wustl.edu	37	1	67299695	67299695	+	Nonsense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	1	67299695	67299695	G	A	SNP	WDR78	ENST00000371026	human	ensembl	69_37n	-1	known	nonsense	c.1870	p.R624*	0.719	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR78	HGNC	ENSG00000152763	228	0	0.00	115	67	36.61	-	-	-
ZER1	0	genome.wustl.edu	37	9	131513756	131513756	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12W-01A-11D-A10Y-09	TCGA-C8-A12W-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fb924d9-3201-491b-90b1-fe8a6320b2d7	75395500-05e2-4acf-a25b-bd7743b389bc	9	131513756	131513756	G	A	SNP	ZER1	ENST00000291900	human	ensembl	69_37n	-1	known	missense	c.974	p.P325L	0.999	NULL	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	ZER1	HGNC	ENSG00000160445	55	0	0.00	111	22	16.54	-	-	-
