Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC9	0	genome.wustl.edu	37	12	21953991	21953991	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	12	21953991	21953991	C	T	SNP	ABCC9	ENST00000261200	human	ensembl	69_37n	-1	known	missense	c.4637	p.R1546H	1.000	pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCC9	HGNC	ENSG00000069431	41	0	0.00	32	10	23.81	-	-	-
BIRC6	0	genome.wustl.edu	37	2	32824940	32824940	+	Silent	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	2	32824940	32824940	C	T	SNP	BIRC6	ENST00000421745	human	ensembl	69_37n	+1	known	silent	c.13965	p.F4655	1.000	pfam_UBQ-conjugat_E2,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	82	0	0.00	41	21	33.87	-	-	-
BRWD1	0	genome.wustl.edu	37	21	40670464	40670464	+	Silent	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	21	40670464	40670464	G	A	SNP	BRWD1	ENST00000333229	human	ensembl	69_37n	-1	known	silent	c.243	p.I81	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	BRWD1	HGNC	ENSG00000185658	47	0	0.00	35	9	20.45	-	-	-
C9orf174	0	genome.wustl.edu	37	9	100090372	100090372	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	9	100090372	100090372	A	G	SNP	C9orf174	ENST00000375202	human	ensembl	69_37n	+1	known	missense	c.1864	p.N622D	1.000	NULL	NULL	-	no_errors	C9orf174	HGNC	ENSG00000197816	36	0	0.00	36	4	10.00	-	-	-
CHSY1	0	genome.wustl.edu	37	15	101718167	101718167	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	15	101718167	101718167	A	T	SNP	CHSY1	ENST00000254190	human	ensembl	69_37n	-1	known	missense	c.1835	p.L612Q	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY1	HGNC	ENSG00000131873	33	0	0.00	25	8	24.24	-	-	-
CREBBP	0	genome.wustl.edu	37	16	3808953	3808953	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	16	3808953	3808953	G	A	SNP	CREBBP	ENST00000262367	human	ensembl	69_37n	-1	known	missense	c.3271	p.R1091C	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	40	0	0.00	19	16	44.44	-	-	-
CUL3	0	genome.wustl.edu	37	2	225362533	225362533	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	2	225362533	225362533	G	A	SNP	CUL3	ENST00000451538	human	ensembl	69_37n	-1	novel	missense	c.4	p.H2Y	1.000	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_neddylation_domain,pfam_Cullin_N,superfamily_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CUL3	HGNC	ENSG00000036257	96	0	0.00	71	11	13.41	-	-	-
DCLK1	0	genome.wustl.edu	37	13	36367617	36367617	+	Splice_Site	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	13	36367617	36367617	C	T	SNP	DCLK1	ENST00000360631	human	ensembl	69_37n	-1	known	splice_site	c.1945-1	e15-1	1.000	-	-	-	no_errors	DCLK1	HGNC	ENSG00000133083	132	0	0.00	64	32	33.33	-	-	-
EFHC1	0	genome.wustl.edu	37	6	52329847	52329847	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	6	52329847	52329847	G	C	SNP	EFHC1	ENST00000371068	human	ensembl	69_37n	+1	known	missense	c.1071	p.E357D	0.839	smart_Uncharacterised_DM10	pfam_DUF1126,smart_Uncharacterised_DM10,pfscan_EF_HAND_2	-	no_errors	EFHC1	HGNC	ENSG00000096093	60	0	0.00	29	18	38.30	-	-	-
ENSG00000260175	0	genome.wustl.edu	37	14	23745649	23745649	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	14	23745649	23745649	G	A	SNP	ENSG00000260175	ENST00000431326	human	ensembl	69_37n	-1	known	missense	c.794	p.P265L	0.629	NULL	superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	RP11-124D2.6	Clone_based_vega_gene	ENSG00000260175	45	0	0.00	32	20	38.46	-	-	-
EZR	0	genome.wustl.edu	37	6	159197489	159197489	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	6	159197489	159197489	G	A	SNP	EZR	ENST00000337147	human	ensembl	69_37n	-1	known	missense	c.746	p.S249F	1.000	pirsf_ERM,pfam_FERM_PH-like_C,pfscan_FERM_domain	pirsf_ERM,pfam_ERM_C,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin,smart_Band_41_domain,prints_Ez/rad/moesin,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	EZR	HGNC	ENSG00000092820	75	0	0.00	38	25	39.68	-	-	-
FAM124A	0	genome.wustl.edu	37	13	51855093	51855093	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	13	51855093	51855093	G	A	SNP	FAM124A	ENST00000280057	human	ensembl	69_37n	+1	known	missense	c.1450	p.E484K	0.000	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510	15	0	0.00	12	7	36.84	-	-	-
FAM133B	0	genome.wustl.edu	37	7	92207495	92207495	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	7	92207495	92207495	C	G	SNP	FAM133B	ENST00000445716	human	ensembl	69_37n	-1	known	missense	c.278	p.R93T	1.000	NULL	NULL	-	no_errors	FAM133B	HGNC	ENSG00000234545	87	0	0.00	48	29	37.66	-	-	-
HJURP	0	genome.wustl.edu	37	2	234749835	234749835	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	2	234749835	234749835	G	A	SNP	HJURP	ENST00000411486	human	ensembl	69_37n	-1	known	missense	c.1591	p.H531Y	0.000	NULL	pfam_HJURP,pfam_HJURP_C,pfam_Centromere_Scm3_N	-	no_errors	HJURP	HGNC	ENSG00000123485	113	0	0.00	36	25	40.98	-	-	-
HOXB13	0	genome.wustl.edu	37	17	46805422	46805422	+	Nonsense_Mutation	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	17	46805422	46805422	C	T	SNP	HOXB13	ENST00000290295	human	ensembl	69_37n	-1	known	nonsense	c.534	p.W178*	1.000	NULL	pfam_HoxA13_N,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	HOXB13	HGNC	ENSG00000159184	33	0	0.00	17	10	37.04	-	-	-
MAP3K4	0	genome.wustl.edu	37	6	161502011	161502011	+	Silent	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	6	161502011	161502011	C	T	SNP	MAP3K4	ENST00000392142	human	ensembl	69_37n	+1	known	silent	c.2196	p.F732	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511	45	0	0.00	23	11	32.35	-	-	-
MLH1	0	genome.wustl.edu	37	3	37089169	37089169	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	3	37089169	37089169	G	C	SNP	MLH1	ENST00000231790	human	ensembl	69_37n	+1	known	missense	c.1891	p.D631H	1.000	NULL	pfam_DNA_mismatch_repair_C,pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	-	no_errors	MLH1	HGNC	ENSG00000076242	66	0	0.00	51	6	10.53	-	-	-
MYBPC2	0	genome.wustl.edu	37	19	50946815	50946815	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	19	50946815	50946815	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	69_37n	+1	known	missense	c.967	p.D323N	1.000	pfam_Ig_I-set,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYBPC2	HGNC	ENSG00000086967	35	0	0.00	12	8	40.00	-	-	-
NACA2	0	genome.wustl.edu	37	17	59668409	59668409	+	Nonsense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	17	59668409	59668409	G	A	SNP	NACA2	ENST00000521764	human	ensembl	69_37n	-1	known	nonsense	c.133	p.Q45*	1.000	pirsf_Nas_poly-pep-assoc_cplx_asu	pfam_Nas_poly-pep-assoc_cplx,superfamily_UBA-like,pirsf_Nas_poly-pep-assoc_cplx_asu,pfscan_Nas_poly-pep-assoc_cplx	-	no_errors	NACA2	HGNC	ENSG00000253506	88	0	0.00	34	27	44.26	-	-	-
NGFRAP1	0	genome.wustl.edu	37	X	102632641	102632641	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	X	102632641	102632641	G	A	SNP	NGFRAP1	ENST00000299872	human	ensembl	69_37n	+1	known	missense	c.222	p.M74I	1.000	pfam_TF_A-like/BEX-like,pirsf_BEX	pfam_TF_A-like/BEX-like,pirsf_BEX	-	no_errors	NGFRAP1	HGNC	ENSG00000166681	50	0	0.00	21	15	41.67	-	-	-
ODZ2	0	genome.wustl.edu	37	5	167673880	167673880	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	5	167673880	167673880	C	T	SNP	ODZ2	ENST00000518659	human	ensembl	69_37n	+1	known	missense	c.5936	p.S1979F	1.000	superfamily_ConA-like_lec_gl	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl,superfamily_Cytokine_IL1-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ2	HGNC	ENSG00000145934	42	0	0.00	20	15	42.86	-	-	-
PARP12	0	genome.wustl.edu	37	7	139756696	139756696	+	Silent	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	7	139756696	139756696	G	A	SNP	PARP12	ENST00000263549	human	ensembl	69_37n	-1	known	silent	c.720	p.P240	0.012	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Znf_CCCH,smart_Znf_CCCH,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP12	HGNC	ENSG00000059378	42	0	0.00	17	5	22.73	-	-	-
PDE1C	0	genome.wustl.edu	37	7	31864536	31864536	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	7	31864536	31864536	T	C	SNP	PDE1C	ENST00000321453	human	ensembl	69_37n	-1	known	missense	c.1351	p.S451G	0.997	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1C	HGNC	ENSG00000154678	57	0	0.00	37	5	11.90	-	-	-
PDS5A	0	genome.wustl.edu	37	4	39846302	39846302	+	Silent	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	4	39846302	39846302	C	T	SNP	PDS5A	ENST00000303538	human	ensembl	69_37n	-1	known	silent	c.3522	p.L1174	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5A	HGNC	ENSG00000121892	112	0	0.00	62	23	27.06	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	27	0	0.00	22	25	53.19	-	-	-
PREX1	0	genome.wustl.edu	37	20	47254270	47254270	+	Silent	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	20	47254270	47254270	G	A	SNP	PREX1	ENST00000371941	human	ensembl	69_37n	-1	known	silent	c.3925	p.L1309	0.995	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX1	HGNC	ENSG00000124126	24	0	0.00	19	7	26.92	-	-	-
PRG4	0	genome.wustl.edu	37	1	186276542	186276544	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	1	186276542	186276544	CTC	-	DEL	PRG4	ENST00000445192	human	ensembl	69_37n	+1	known	in_frame_del	c.1691_1693	p.P565in_frame_del	0.000:0.001:0.001	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin/matrixin_repeat,superfamily_Hemopexin/matrixin,smart_Somatomedin_B_dom,smart_Hemopexin/matrixin_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690	87	0	0.00	78	9	10.34	-	-	-
RRNAD1	0	genome.wustl.edu	37	1	156702141	156702141	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	1	156702141	156702141	G	T	SNP	RRNAD1	ENST00000368216	human	ensembl	69_37n	+1	known	missense	c.305	p.R102L	1.000	NULL	NULL	-	no_errors	RRNAD1	HGNC	ENSG00000143303	40	0	0.00	38	5	11.63	-	-	-
SDK2	0	genome.wustl.edu	37	17	71427712	71427712	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	17	71427712	71427712	G	C	SNP	SDK2	ENST00000392650	human	ensembl	69_37n	-1	known	missense	c.1409	p.A470G	0.985	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	SDK2	HGNC	ENSG00000069188	26	0	0.00	25	7	21.88	-	-	-
SLC5A11	0	genome.wustl.edu	37	16	24869995	24869995	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	16	24869995	24869995	C	A	SNP	SLC5A11	ENST00000347898	human	ensembl	69_37n	+1	known	missense	c.31	p.P11T	0.008	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A11	HGNC	ENSG00000158865	43	0	0.00	22	4	15.38	-	-	-
SNTB1	0	genome.wustl.edu	37	8	121644761	121644761	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	8	121644761	121644761	C	T	SNP	SNTB1	ENST00000395601	human	ensembl	69_37n	-1	known	missense	c.919	p.E307K	0.989	NULL	pfam_PDZ,pfam_Pleckstrin_homology,superfamily_PDZ,smart_Pleckstrin_homology,smart_PDZ,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTB1	HGNC	ENSG00000172164	47	0	0.00	18	14	43.75	-	-	-
ST7	0	genome.wustl.edu	37	7	116863013	116863013	+	Silent	SNP	A	A	G			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	7	116863013	116863013	A	G	SNP	ST7	ENST00000265437	human	ensembl	69_37n	+1	known	silent	c.1737	p.Q579	0.047	NULL	pfam_ST7	-	no_errors	ST7	HGNC	ENSG00000004866	68	0	0.00	25	27	51.92	-	-	-
STOX2	0	genome.wustl.edu	37	4	184922544	184922544	+	Missense_Mutation	SNP	T	T	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	4	184922544	184922544	T	A	SNP	STOX2	ENST00000308497	human	ensembl	69_37n	+1	known	missense	c.233	p.L78H	1.000	pfam_Storkhead-box_winged-helix	pfam_Storkhead-box_winged-helix	-	no_errors	STOX2	HGNC	ENSG00000173320	35	0	0.00	7	22	75.86	-	-	-
TBC1D17	0	genome.wustl.edu	37	19	50381800	50381800	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	19	50381800	50381800	G	A	SNP	TBC1D17	ENST00000221543	human	ensembl	69_37n	+1	known	missense	c.166	p.D56N	1.000	pfam_DUF3548	pfam_DUF3548,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D17	HGNC	ENSG00000104946	39	0	0.00	24	21	46.67	-	-	-
TCF20	0	genome.wustl.edu	37	22	42608681	42608681	+	Silent	SNP	G	G	A			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	22	42608681	42608681	G	A	SNP	TCF20	ENST00000359486	human	ensembl	69_37n	-1	known	silent	c.2631	p.V877	1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	36	0	0.00	13	10	43.48	-	-	-
TSPYL1	0	genome.wustl.edu	37	6	116600543	116600543	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	6	116600543	116600543	C	T	SNP	TSPYL1	ENST00000368608	human	ensembl	69_37n	-1	known	missense	c.451	p.E151K	0.000	NULL	pfam_NAP_family	-	no_errors	TSPYL1	HGNC	ENSG00000189241	17	0	0.00	12	9	42.86	-	-	-
ZFAND2B	0	genome.wustl.edu	37	2	220073995	220073995	+	Nonsense_Mutation	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	2	220073995	220073995	C	T	SNP	ZFAND2B	ENST00000425849	human	ensembl	69_37n	+1	putative	nonsense	c.109	p.Q37*	0.997	NULL	pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ZFAND2B	HGNC	ENSG00000158552	38	0	0.00	27	7	20.59	-	-	-
ZNF442	0	genome.wustl.edu	37	19	12461860	12461860	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	19	12461860	12461860	C	T	SNP	ZNF442	ENST00000242804	human	ensembl	69_37n	-1	known	missense	c.539	p.R180H	0.005	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF442	HGNC	ENSG00000198342	117	0	0.00	61	25	29.07	-	-	-
ZNF525	0	genome.wustl.edu	37	19	53885220	53885220	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	19	53885220	53885220	G	T	SNP	ZNF525	ENST00000355326	human	ensembl	69_37n	+1	known	missense	c.542	p.G181V	0.995	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF525	HGNC	ENSG00000203326	22	0	0.00	15	7	31.82	-	-	-
ZNF585A	0	genome.wustl.edu	37	19	37643456	37643456	+	Missense_Mutation	SNP	A	A	C			TCGA-C8-A1HE-01A-11D-A188-09	TCGA-C8-A1HE-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	8314bada-5bd3-4cd2-b308-4cb2db64de94	73d1406e-7588-4ba8-9900-8ff69d65b2bd	19	37643456	37643456	A	C	SNP	ZNF585A	ENST00000356958	human	ensembl	69_37n	-1	known	missense	c.1345	p.S449A	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585A	HGNC	ENSG00000196967	73	0	0.00	36	16	30.77	-	-	-
