Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACOT2	0	genome.wustl.edu	37	14	74042189	74042189	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	14	74042189	74042189	A	G	SNP	ACOT2	ENST00000238651	human	ensembl	69_37n	+1	known	missense	c.1424	p.H475R	0.000	pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	ACOT2	HGNC	ENSG00000119673	9	0	0.00	8	7	46.67	-	-	-
ACSS2	0	genome.wustl.edu	37	20	33462890	33462890	+	RNA	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	20	33462890	33462890	G	A	SNP	ACSS2	ENST00000461051	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	ACSS2	HGNC	ENSG00000131069	34	0	0.00	31	15	32.61	-	-	-
ACTG1	0	genome.wustl.edu	37	17	79479050	79479050	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	17	79479050	79479050	T	C	SNP	ACTG1	ENST00000331925	human	ensembl	69_37n	-1	known	missense	c.242	p.D81G	1.000	pfam_Actin-like,smart_Actin-like,prints_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTG1	HGNC	ENSG00000184009	37	0	0.00	60	16	21.05	-	-	-
ATF5	0	genome.wustl.edu	37	19	50436280	50436280	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	19	50436280	50436280	G	C	SNP	ATF5	ENST00000423777	human	ensembl	69_37n	+1	known	missense	c.780	p.E260D	1.000	pfam_bZIP_1,pfam_bZIP_2,smart_bZIP,pfscan_bZIP	pfam_bZIP_1,pfam_bZIP_2,smart_bZIP,pfscan_bZIP	-	no_errors	ATF5	HGNC	ENSG00000169136	46	0	0.00	42	14	25.00	-	-	-
ATL1	0	genome.wustl.edu	37	14	51057793	51057793	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	14	51057793	51057793	G	T	SNP	ATL1	ENST00000357032	human	ensembl	69_37n	+1	known	missense	c.417	p.K139N	1.000	pfam_Guanylate-bd_N	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	-	no_errors	ATL1	HGNC	ENSG00000198513	30	0	0.00	28	4	12.50	-	-	-
AURKAIP1	0	genome.wustl.edu	37	1	1310127	1310127	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	1310127	1310127	C	G	SNP	AURKAIP1	ENST00000321751	human	ensembl	69_37n	-1	known	missense	c.10	p.G4R	0.055	NULL	pfam_DUF1713_mit	-	no_errors	AURKAIP1	HGNC	ENSG00000175756	51	0	0.00	60	11	15.49	-	-	-
CDH23	0	genome.wustl.edu	37	10	73491898	73491898	+	Silent	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	10	73491898	73491898	G	A	SNP	CDH23	ENST00000224721	human	ensembl	69_37n	+1	known	silent	c.3879	p.P1293	0.071	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	29	0	0.00	26	14	34.15	-	-	-
COL4A4	0	genome.wustl.edu	37	2	227945200	227945200	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	2	227945200	227945200	G	A	SNP	COL4A4	ENST00000396625	human	ensembl	69_37n	-1	known	missense	c.1762	p.R588W	0.008	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A4	HGNC	ENSG00000081052	28	0	0.00	22	11	33.33	-	-	-
DACT2	0	genome.wustl.edu	37	6	168708328	168708328	+	Silent	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	6	168708328	168708328	G	A	SNP	DACT2	ENST00000366795	human	ensembl	69_37n	-1	known	silent	c.2109	p.D703	0.005	NULL	NULL	-	no_errors	DACT2	HGNC	ENSG00000164488	40	0	0.00	21	20	48.78	-	-	-
DBH	0	genome.wustl.edu	37	9	136505083	136505083	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	9	136505083	136505083	G	C	SNP	DBH	ENST00000393056	human	ensembl	69_37n	+1	known	missense	c.455	p.G152A	0.978	pfam_DOMON_domain,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	DBH	HGNC	ENSG00000123454	20	0	0.00	16	11	40.74	-	-	-
DDI2	0	genome.wustl.edu	37	1	15956963	15956963	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	15956963	15956963	C	G	SNP	DDI2	ENST00000480945	human	ensembl	69_37n	+1	known	missense	c.412	p.L138V	1.000	NULL	pfam_Peptidase_aspartic_euk-pred,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,pfam_Ubiquitin,superfamily_Peptidase_aspartic,pfscan_Ubiquitin_supergroup	-	no_errors	DDI2	HGNC	ENSG00000197312	32	0	0.00	16	12	42.86	-	-	-
DIP2A	0	genome.wustl.edu	37	21	47966833	47966833	+	Silent	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	21	47966833	47966833	C	T	SNP	DIP2A	ENST00000318711	human	ensembl	69_37n	+1	known	silent	c.2403	p.N801	0.569	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305	36	0	0.00	24	7	22.58	-	-	-
DNM1P46	0	genome.wustl.edu	37	15	100340002	100340002	+	RNA	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	15	100340002	100340002	C	T	SNP	DNM1P46	ENST00000341853	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	29	0	0.00	28	5	15.15	-	-	-
DNM2	0	genome.wustl.edu	37	19	10935731	10935731	+	Splice_Site	SNP	A	A	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	19	10935731	10935731	A	T	SNP	DNM2	ENST00000314646	human	ensembl	69_37n	+1	known	splice_site	c.1894-2	e18-2	1.000	-	-	-	no_errors	DNM2	HGNC	ENSG00000079805	28	0	0	30	11	26.83	-	-	-
DNMT1	0	genome.wustl.edu	37	19	10252733	10252733	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	19	10252733	10252733	C	A	SNP	DNMT1	ENST00000359526	human	ensembl	69_37n	-1	known	missense	c.3280	p.G1094C	0.313	pirsf_DNA_C5-MeTrfase_1_euk,pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC	ENSG00000130816	30	0	0.00	20	8	28.57	-	-	-
EEF1G	0	genome.wustl.edu	37	11	62340150	62340150	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	11	62340150	62340150	C	T	SNP	EEF1G	ENST00000378019	human	ensembl	69_37n	-1	known	missense	c.227	p.G76E	1.000	pfam_Glutathione_S-Trfase_N,superfamily_Thioredoxin-like_fold	pfam_Transl_elong_EF1_G_con,pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Transl_elong_EF1_G_con,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,pfscan_Transl_elong_EF1_G_con	-	no_errors	EEF1G	HGNC	ENSG00000254772	29	0	0.00	27	13	32.50	-	-	-
EIF2B1	0	genome.wustl.edu	37	12	124111642	124111642	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	12	124111642	124111642	G	C	SNP	EIF2B1	ENST00000424014	human	ensembl	69_37n	-1	known	missense	c.431	p.A144G	1.000	pfam_IF-2B-related	pfam_IF-2B-related	-	no_errors	EIF2B1	HGNC	ENSG00000111361	29	0	0.00	26	8	23.53	-	-	-
FAM5B	0	genome.wustl.edu	37	1	177250856	177250857	+	RNA	DEL	AC	AC	-			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	177250856	177250857	AC	-	DEL	FAM5B	ENST00000478325	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FAM5B	HGNC	ENSG00000198797	32	0	0.00	51	6	10.34	-	-	-
FLJ26850	0	genome.wustl.edu	37	19	50554082	50554082	+	RNA	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	19	50554082	50554082	C	T	SNP	FLJ26850	ENST00000527209	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2126E3.1	Clone_based_vega_gene	ENSG00000204666	42	0	0.00	41	10	19.23	-	-	-
FUZ	0	genome.wustl.edu	37	19	50315565	50315565	+	Silent	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	19	50315565	50315565	C	T	SNP	FUZ	ENST00000313777	human	ensembl	69_37n	-1	known	silent	c.261	p.E87	0.996	NULL	NULL	-	no_errors	FUZ	HGNC	ENSG00000010361	27	0	0.00	20	3	13.04	-	-	-
GAB3	0	genome.wustl.edu	37	X	153940823	153940823	+	Silent	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	X	153940823	153940823	G	A	SNP	GAB3	ENST00000424127	human	ensembl	69_37n	-1	known	silent	c.750	p.S250	0.145	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB3	HGNC	ENSG00000160219	15	0	0.00	14	6	30.00	-	-	-
GPC5	0	genome.wustl.edu	37	13	92345527	92345527	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	13	92345527	92345527	G	T	SNP	GPC5	ENST00000377067	human	ensembl	69_37n	+1	known	missense	c.412	p.A138S	0.996	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC	ENSG00000179399	70	0	0.00	36	4	10.00	-	-	-
HLA-P	0	genome.wustl.edu	37	6	29765145	29765145	+	RNA	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	6	29765145	29765145	C	T	SNP	HLA-P	ENST00000457107	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	HLA-P	HGNC	ENSG00000181126	12	0	0.00	16	11	40.74	-	-	-
HTR3D	0	genome.wustl.edu	37	3	183752970	183752970	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	3	183752970	183752970	C	T	SNP	HTR3D	ENST00000382489	human	ensembl	69_37n	+1	known	missense	c.244	p.H82Y	0.001	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd	-	no_errors	HTR3D	HGNC	ENSG00000186090	60	0	0.00	87	14	13.86	-	-	-
KIAA0040	0	genome.wustl.edu	37	1	175129996	175129996	+	Missense_Mutation	SNP	A	A	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	175129996	175129996	A	C	SNP	KIAA0040	ENST00000423313	human	ensembl	69_37n	-1	known	missense	c.154	p.W52G	1.000	NULL	NULL	-	no_errors	KIAA0040	HGNC	ENSG00000235750	71	0	0.00	96	15	13.51	-	-	-
KIAA0195	0	genome.wustl.edu	37	17	73487872	73487872	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	17	73487872	73487872	C	T	SNP	KIAA0195	ENST00000314256	human	ensembl	69_37n	+1	known	missense	c.1487	p.P496L	0.418	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728	40	0	0.00	37	10	21.28	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56168490	56168491	+	Frame_Shift_Ins	INS	-	-	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	5	56168490	56168491	-	A	INS	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.1446_1447	p.R482fs	0.994:1.000	pfscan_Znf_RING	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	32	0	0.00	39	11	22.00	-	-	-
MGC21881	0	genome.wustl.edu	37	9	66554428	66554428	+	RNA	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	9	66554428	66554428	G	A	SNP	MGC21881	ENST00000305709	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.261	-	-	-	no_errors	RP11-262H14.4	Clone_based_vega_gene	ENSG00000170161	51	0	0.00	68	33	32.67	-	-	-
MIR3689C	0	genome.wustl.edu	37	9	137741177	137741177	+	RNA	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	9	137741177	137741177	G	A	SNP	MIR3689C	ENST00000581239	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR3689C	HGNC	ENSG00000264744	23	0	0.00	15	4	21.05	-	-	-
MLL3	0	genome.wustl.edu	37	7	151962231	151962231	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	7	151962231	151962231	C	G	SNP	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	missense	c.1076	p.C359S	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,pfscan_Znf_PHD-finger,pfscan_Znf_RING	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	56	0	0.00	68	16	19.05	-	-	-
MRGPRF	0	genome.wustl.edu	37	11	68773560	68773560	+	Missense_Mutation	SNP	A	A	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	11	68773560	68773560	A	C	SNP	MRGPRF	ENST00000309099	human	ensembl	69_37n	-1	known	missense	c.218	p.I73S	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	MRGPRF	HGNC	ENSG00000172935	34	0	0.00	76	9	10.59	-	-	-
MRPS16	0	genome.wustl.edu	37	10	75011558	75011558	+	Silent	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	10	75011558	75011558	G	A	SNP	MRPS16	ENST00000372945	human	ensembl	69_37n	-1	known	silent	c.237	p.C79	0.957	pfam_Ribosomal_S16,superfamily_Ribosomal_S16_dom,tigrfam_Ribosomal_S16	pfam_Ribosomal_S16,superfamily_Ribosomal_S16_dom,tigrfam_Ribosomal_S16	-	no_errors	MRPS16	HGNC	ENSG00000182180	42	0	0.00	38	16	29.63	-	-	-
MUC4	0	genome.wustl.edu	37	3	195505918	195505918	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	3	195505918	195505918	G	T	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.12533	p.P4178H	0.150	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	44	0	0.00	60	8	11.76	-	-	-
NFATC4	0	genome.wustl.edu	37	14	24846879	24846879	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	14	24846879	24846879	C	T	SNP	NFATC4	ENST00000556279	human	ensembl	69_37n	+1	known	missense	c.2773	p.P925S	1.000	NULL	pfam_RHD,pfam_IPT_TIG_rcpt,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,pfscan_RHD,prints_NFAT	-	no_errors	NFATC4	HGNC	ENSG00000100968	36	0	0.00	17	11	39.29	-	-	-
NOL4	0	genome.wustl.edu	37	18	31685119	31685120	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	18	31685119	31685120	TG	-	DEL	NOL4	ENST00000261592	human	ensembl	69_37n	-1	known	frame_shift_del	c.420_419	p.S140fs	1.000:1.000	NULL	NULL	-	no_errors	NOL4	HGNC	ENSG00000101746	26	0	0.00	20	7	25.00	-	-	-
OR2B6	0	genome.wustl.edu	37	6	27925280	27925280	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	6	27925280	27925280	A	G	SNP	OR2B6	ENST00000244623	human	ensembl	69_37n	+1	known	missense	c.262	p.I88V	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2B6	HGNC	ENSG00000124657	54	0	0.00	27	12	30.77	-	-	-
PAGE5	0	genome.wustl.edu	37	X	55248225	55248225	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	X	55248225	55248225	G	C	SNP	PAGE5	ENST00000289619	human	ensembl	69_37n	+1	known	missense	c.167	p.R56P	0.000	pfam_GAGE	pfam_GAGE	-	no_errors	PAGE5	HGNC	ENSG00000158639	42	0	0.00	53	13	19.70	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952074	178952074	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	3	178952074	178952074	G	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3129	p.M1043I	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	22	0	0.00	5	14	73.68	-	-	-
PIP5KL1	0	genome.wustl.edu	37	9	130688041	130688041	+	RNA	SNP	C	C	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	9	130688041	130688041	C	G	SNP	PIP5KL1	ENST00000476624	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	PIP5KL1	HGNC	ENSG00000167103	28	0	0.00	14	8	36.36	-	-	-
PKD1	0	genome.wustl.edu	37	16	2142112	2142112	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	16	2142112	2142112	C	T	SNP	PKD1	ENST00000262304	human	ensembl	69_37n	-1	known	missense	c.11347	p.V3783I	0.028	pfam_PKD1_2_channel	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_LipOase_LH2,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_LipOase_LH2,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_LipOase_LH2,pfscan_REJ-like,pfscan_WSC_carb-bd,prints_PKD_1,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	33	0	0.00	27	11	28.95	-	-	-
PRDX1	0	genome.wustl.edu	37	1	45984654	45984654	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	45984654	45984654	A	G	SNP	PRDX1	ENST00000262746	human	ensembl	69_37n	-1	known	missense	c.62	p.M21T	1.000	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,pfam_Peroxiredoxin_C,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX1	HGNC	ENSG00000117450	58	0	0.00	42	13	23.64	-	-	-
RBM10	0	genome.wustl.edu	37	X	47028833	47028833	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	X	47028833	47028833	G	A	SNP	RBM10	ENST00000377604	human	ensembl	69_37n	+1	known	missense	c.137	p.R46H	0.991	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872	73	0	0.00	43	30	41.10	-	-	-
RBM39	0	genome.wustl.edu	37	20	34297186	34297187	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	20	34297186	34297187	AA	-	DEL	RBM39	ENST00000253363	human	ensembl	69_37n	-1	known	frame_shift_del	c.1185_1184	p.F395fs	1.000:1.000	tigrfam_CC1_SF	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_CC1_SF	-	no_errors	RBM39	HGNC	ENSG00000131051	15	0	0.00	32	11	25.58	-	-	-
SGSM1	0	genome.wustl.edu	37	22	25264385	25264385	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	22	25264385	25264385	T	C	SNP	SGSM1	ENST00000400359	human	ensembl	69_37n	+1	known	missense	c.1037	p.I346T	1.000	NULL	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM1	HGNC	ENSG00000167037	33	0	0.00	25	15	37.50	-	-	-
SH2D2A	0	genome.wustl.edu	37	1	156783649	156783649	+	Silent	SNP	G	G	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	156783649	156783649	G	T	SNP	SH2D2A	ENST00000392306	human	ensembl	69_37n	-1	known	silent	c.588	p.L196	0.329	pfscan_SH2	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	SH2D2A	HGNC	ENSG00000027869	19	0	0.00	17	5	22.73	-	-	-
SH2D2A	0	genome.wustl.edu	37	1	156783650	156783650	+	Missense_Mutation	SNP	A	A	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	156783650	156783650	A	C	SNP	SH2D2A	ENST00000392306	human	ensembl	69_37n	-1	known	missense	c.587	p.L196R	0.900	pfscan_SH2	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	SH2D2A	HGNC	ENSG00000027869	19	0	0.00	17	5	22.73	-	-	-
SHANK2	0	genome.wustl.edu	37	11	70336336	70336336	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	11	70336336	70336336	G	C	SNP	SHANK2	ENST00000357171	human	ensembl	69_37n	-1	known	missense	c.832	p.Q278E	0.005	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHANK2	HGNC	ENSG00000162105	28	0	0.00	78	15	16.13	-	-	-
SHANK2	0	genome.wustl.edu	37	11	70336386	70336386	+	Nonsense_Mutation	SNP	G	G	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	11	70336386	70336386	G	C	SNP	SHANK2	ENST00000338508	human	ensembl	69_37n	-1	known	nonsense	c.2549	p.S850*	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105	40	0	0.00	105	24	18.60	-	-	-
SLC12A4	0	genome.wustl.edu	37	16	67979749	67979749	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	16	67979749	67979749	G	T	SNP	SLC12A4	ENST00000422611	human	ensembl	69_37n	-1	known	missense	c.2771	p.T924N	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067	44	0	0.00	41	13	23.64	-	-	-
SLC6A13	0	genome.wustl.edu	37	12	369124	369124	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	12	369124	369124	C	G	SNP	SLC6A13	ENST00000343164	human	ensembl	69_37n	-1	known	missense	c.95	p.R32P	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379	67	0	0.00	52	11	17.46	-	-	-
TBC1D8B	0	genome.wustl.edu	37	X	106093309	106093309	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	X	106093309	106093309	A	G	SNP	TBC1D8B	ENST00000357242	human	ensembl	69_37n	+1	known	missense	c.1892	p.Q631R	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_HAND_2,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8B	HGNC	ENSG00000133138	61	0	0.00	48	12	20.00	-	-	-
THBS1	0	genome.wustl.edu	37	15	39874617	39874619	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	15	39874617	39874619	GAA	-	DEL	THBS1	ENST00000260356	human	ensembl	69_37n	+1	known	in_frame_del	c.291_293	p.K99in_frame_del	1.000:1.000:1.000	superfamily_ConA-like_lec_gl,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801	25	0	0.00	23	10	30.30	-	-	-
TMEM117	0	genome.wustl.edu	37	12	44783123	44783123	+	RNA	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	12	44783123	44783123	G	A	SNP	TMEM117	ENST00000546978	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TMEM117	HGNC	ENSG00000139173	26	0	0.00	18	4	18.18	-	-	-
TPMT	0	genome.wustl.edu	37	6	18148076	18148076	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	6	18148076	18148076	C	T	SNP	TPMT	ENST00000309983	human	ensembl	69_37n	-1	known	missense	c.211	p.G71R	1.000	pfam_TPMT,pirsf_Thiopurine_S-MeTrfase	pfam_TPMT,pirsf_Thiopurine_S-MeTrfase	-	no_errors	TPMT	HGNC	ENSG00000137364	35	0	0.00	29	31	50.82	-	-	-
TRIM15	0	genome.wustl.edu	37	6	30131731	30131731	+	Silent	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	6	30131731	30131731	C	T	SNP	TRIM15	ENST00000376694	human	ensembl	69_37n	+1	known	silent	c.270	p.I90	0.802	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM15	HGNC	ENSG00000204610	80	0	0.00	33	19	36.54	-	-	-
UBR4	0	genome.wustl.edu	37	1	19474500	19474500	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	1	19474500	19474500	T	C	SNP	UBR4	ENST00000375267	human	ensembl	69_37n	-1	known	missense	c.7616	p.Y2539C	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	30	0	0.00	9	10	52.63	-	-	-
USP36	0	genome.wustl.edu	37	17	76794540	76794540	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	17	76794540	76794540	G	A	SNP	USP36	ENST00000312010	human	ensembl	69_37n	-1	known	missense	c.3334	p.H1112Y	0.991	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP36	HGNC	ENSG00000055483	34	0	0.00	50	10	16.67	-	-	-
WDR38	0	genome.wustl.edu	37	9	127619645	127619645	+	Silent	SNP	C	C	G			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	9	127619645	127619645	C	G	SNP	WDR38	ENST00000373574	human	ensembl	69_37n	+1	known	silent	c.771	p.V257	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR38	HGNC	ENSG00000136918	27	0	0.00	23	16	41.03	-	-	-
ZNF295	0	genome.wustl.edu	37	21	43414183	43414183	+	Frame_Shift_Del	DEL	T	T	-			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	21	43414183	43414183	T	-	DEL	ZNF295	ENST00000310826	human	ensembl	69_37n	-1	known	frame_shift_del	c.22	p.I8fs	1.000	superfamily_BTB/POZ_fold	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZNF295	HGNC	ENSG00000173276	35	0	0.00	28	17	37.78	-	-	-
ZNF815P	0	genome.wustl.edu	37	7	5886722	5886722	+	RNA	SNP	C	C	T			TCGA-C8-A3M8-01A-11D-A20S-09	TCGA-C8-A3M8-10A-01D-A20S-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6ceb3f6f-e531-4f02-ac2b-67e0c1a58918	dd4257ed-800d-4c1d-99db-37991e1b12c8	7	5886722	5886722	C	T	SNP	ZNF815P	ENST00000421890	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF815P	HGNC	ENSG00000235944	42	0	0.00	47	20	29.85	-	-	-
