Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTSL1	0	genome.wustl.edu	37	9	18892387	18892387	+	Silent	SNP	G	G	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	9	18892387	18892387	G	T	SNP	ADAMTSL1	ENST00000380545	human	ensembl	69_37n	+1	putative	silent	c.747	p.R249	1.000	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	42	0	0.00	13	4	23.53	-	-	-
APOBR	0	genome.wustl.edu	37	16	28506485	28506485	+	Silent	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	16	28506485	28506485	G	A	SNP	APOBR	ENST00000564831	human	ensembl	69_37n	+1	known	silent	c.123	p.A41	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	74	0	0.00	82	29	26.13	-	-	-
BCAP31	0	genome.wustl.edu	37	X	152986328	152986328	+	Silent	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	X	152986328	152986328	G	A	SNP	BCAP31	ENST00000458587	human	ensembl	69_37n	-1	known	silent	c.393	p.I131	0.222	pfam_Bap31	pfam_Bap31	-	no_errors	BCAP31	HGNC	ENSG00000185825	77	0	0.00	78	41	34.45	-	-	-
CA4	0	genome.wustl.edu	37	17	58235472	58235472	+	Nonstop_Mutation	SNP	T	T	C			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	17	58235472	58235472	T	C	SNP	CA4	ENST00000586876	human	ensembl	69_37n	+1	known	nonstop	c.319	p.*107Q	0.000	NULL	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA4	HGNC	ENSG00000167434	41	0	0.00	4	5	55.56	-	-	-
CD99L2	0	genome.wustl.edu	37	X	149999738	149999738	+	Silent	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	X	149999738	149999738	C	T	SNP	CD99L2	ENST00000370377	human	ensembl	69_37n	-1	known	silent	c.96	p.L32	0.918	NULL	pfam_CD99L2	-	no_errors	CD99L2	HGNC	ENSG00000102181	112	0	0.00	106	63	37.28	-	-	-
CHD7	0	genome.wustl.edu	37	8	61777880	61777880	+	Silent	SNP	T	T	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	8	61777880	61777880	T	A	SNP	CHD7	ENST00000307121	human	ensembl	69_37n	+1	known	silent	c.8382	p.A2794	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316	60	0	0.00	35	32	47.76	-	-	-
CHMP4C	0	genome.wustl.edu	37	8	82670443	82670443	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	8	82670443	82670443	C	T	SNP	CHMP4C	ENST00000297265	human	ensembl	69_37n	+1	known	missense	c.550	p.R184C	0.007	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP4C	HGNC	ENSG00000164695	103	0	0.00	134	51	27.57	-	-	-
CLEC4C	0	genome.wustl.edu	37	12	7894054	7894054	+	Silent	SNP	T	T	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	12	7894054	7894054	T	A	SNP	CLEC4C	ENST00000360345	human	ensembl	69_37n	-1	known	silent	c.198	p.P66	0.001	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	CLEC4C	HGNC	ENSG00000198178	136	0	0.00	457	78	14.58	-	-	-
CNTNAP1	0	genome.wustl.edu	37	17	40847798	40847798	+	Silent	SNP	C	C	G			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	17	40847798	40847798	C	G	SNP	CNTNAP1	ENST00000264638	human	ensembl	69_37n	+1	known	silent	c.3252	p.V1084	0.988	superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797	94	0	0.00	16	30	65.22	-	-	-
CNTNAP1	0	genome.wustl.edu	37	17	40847799	40847799	+	Missense_Mutation	SNP	T	T	G			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	17	40847799	40847799	T	G	SNP	CNTNAP1	ENST00000264638	human	ensembl	69_37n	+1	known	missense	c.3253	p.S1085A	0.992	superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797	94	0	0.00	16	30	65.22	-	-	-
COASY	0	genome.wustl.edu	37	17	40714971	40714971	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	17	40714971	40714971	C	A	SNP	COASY	ENST00000590958	human	ensembl	69_37n	+1	known	missense	c.418	p.P140T	1.000	NULL	pfam_Depp_CoAkinase,pfam_Cytidylyltransf,tigrfam_Depp_CoAkinase	-	no_errors	COASY	HGNC	ENSG00000068120	50	0	0.00	8	34	80.95	-	-	-
COL4A3	0	genome.wustl.edu	37	2	228163516	228163516	+	Silent	SNP	A	A	G			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	2	228163516	228163516	A	G	SNP	COL4A3	ENST00000396578	human	ensembl	69_37n	+1	known	silent	c.3870	p.P1290	0.968	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031	26	0	0.00	24	15	38.46	-	-	-
DACT2	0	genome.wustl.edu	37	6	168709386	168709386	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	6	168709386	168709386	C	T	SNP	DACT2	ENST00000366795	human	ensembl	69_37n	-1	known	missense	c.1051	p.E351K	0.003	NULL	NULL	-	no_errors	DACT2	HGNC	ENSG00000164488	22	0	0.00	12	7	36.84	-	-	-
EXOC6	0	genome.wustl.edu	37	10	94679793	94679793	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	10	94679793	94679793	A	G	SNP	EXOC6	ENST00000371547	human	ensembl	69_37n	+1	known	missense	c.922	p.I308V	1.000	pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6	HGNC	ENSG00000138190	284	0	0.00	213	126	37.06	-	-	-
FRMD1	0	genome.wustl.edu	37	6	168462600	168462600	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	6	168462600	168462600	G	A	SNP	FRMD1	ENST00000283309	human	ensembl	69_37n	-1	known	missense	c.932	p.T311M	0.996	pfscan_FERM_domain	pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD1	HGNC	ENSG00000153303	45	0	0.00	24	16	38.10	-	-	-
FRMD4A	0	genome.wustl.edu	37	10	13699219	13699219	+	Silent	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	10	13699219	13699219	C	T	SNP	FRMD4A	ENST00000357447	human	ensembl	69_37n	-1	known	silent	c.2370	p.A790	0.131	NULL	pfam_DUF3338,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4A	HGNC	ENSG00000151474	14	0	0.00	4	6	60.00	-	-	-
HDAC1	0	genome.wustl.edu	37	1	32796496	32796496	+	Silent	SNP	G	G	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	1	32796496	32796496	G	T	SNP	HDAC1	ENST00000373548	human	ensembl	69_37n	+1	known	silent	c.966	p.T322	0.529	pirsf_His_deacetylse_1	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC1	HGNC	ENSG00000116478	84	0	0.00	77	36	31.58	-	-	-
KIF2B	0	genome.wustl.edu	37	17	51900535	51900535	+	Silent	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	17	51900535	51900535	G	A	SNP	KIF2B	ENST00000268919	human	ensembl	69_37n	+1	known	silent	c.141	p.T47	0.072	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	70	0	0.00	11	36	76.60	-	-	-
KRT81	0	genome.wustl.edu	37	12	52682214	52682215	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	12	52682214	52682215	-	T	INS	KRT81	ENST00000327741	human	ensembl	69_37n	-1	known	frame_shift_ins	c.666_665	p.S223fs	0.668:0.994	pfam_F	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT81	HGNC	ENSG00000205426	114	0	0.00	87	47	35.07	-	-	-
LAMA5	0	genome.wustl.edu	37	20	60886769	60886769	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	20	60886769	60886769	G	T	SNP	LAMA5	ENST00000252999	human	ensembl	69_37n	-1	known	missense	c.9707	p.P3236Q	0.003	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	24	0	0.00	5	6	54.55	-	-	-
LPAR2	0	genome.wustl.edu	37	19	19735340	19735340	+	Silent	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	19	19735340	19735340	G	A	SNP	LPAR2	ENST00000407877	human	ensembl	69_37n	-1	known	silent	c.781	p.L261	0.999	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_LPA_rcpt_EDG4,prints_7TM_GPCR_Rhodpsn,prints_LPA_rcpt,prints_LPA_rcpt_EDG2,prints_Melcrt_ACTH_rcpt,prints_S1P_rcpt	-	no_errors	LPAR2	HGNC	ENSG00000064547	32	0	0.00	32	25	43.86	-	-	-
LUC7L2	0	genome.wustl.edu	37	7	139094326	139094326	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	7	139094326	139094326	G	C	SNP	LUC7L2	ENST00000541515	human	ensembl	69_37n	+1	known	missense	c.903	p.K301N	1.000	pfam_LUC7-rel	pfam_LUC7-rel	-	no_errors	LUC7L2	HGNC	ENSG00000146963	79	0	0.00	56	45	44.55	-	-	-
MUC12	0	genome.wustl.edu	37	7	100637242	100637242	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	7	100637242	100637242	G	A	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.3827	p.R1276H	0.001	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	27	0	0.00	65	16	19.75	-	-	-
MYH1	0	genome.wustl.edu	37	17	10419585	10419585	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	17	10419585	10419585	C	A	SNP	MYH1	ENST00000226207	human	ensembl	69_37n	-1	known	missense	c.279	p.M93I	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	333	0	0.00	310	200	39.22	-	-	-
MYT1	0	genome.wustl.edu	37	20	62863610	62863612	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	20	62863610	62863612	GCA	-	DEL	MYT1	ENST00000536311	human	ensembl	69_37n	+1	known	in_frame_del	c.2850_2852	p.Q951in_frame_del	1.000:1.000:1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132	61	0	0.00	5	15	71.43	-	-	-
NEUROD4	0	genome.wustl.edu	37	12	55420713	55420713	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	12	55420713	55420713	C	T	SNP	NEUROD4	ENST00000242994	human	ensembl	69_37n	+1	known	nonsense	c.490	p.Q164*	1.000	pfam_Neurogenic_DUF,superfamily_HLH_DNA-bd,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pirsf_TF_bHLH_NeuroD,pfscan_HLH_DNA-bd	-	no_errors	NEUROD4	HGNC	ENSG00000123307	44	0	0.00	28	18	39.13	-	-	-
NFX1	0	genome.wustl.edu	37	9	33364082	33364082	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	9	33364082	33364082	G	T	SNP	NFX1	ENST00000379540	human	ensembl	69_37n	+1	known	missense	c.2948	p.S983I	1.000	smart_R3H_ss-bd	pfam_Znf_NFX1,pfam_R3H_ss-bd,smart_Znf_RING,smart_Znf_NFX1,smart_R3H_ss-bd,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_R3H_ss-bd	-	no_errors	NFX1	HGNC	ENSG00000086102	144	0	0.00	33	112	77.24	-	-	-
NLGN1	0	genome.wustl.edu	37	3	173322406	173322406	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	3	173322406	173322406	C	A	SNP	NLGN1	ENST00000401917	human	ensembl	69_37n	+1	known	nonsense	c.18	p.C6*	1.000	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760	136	0	0.00	78	129	62.32	-	-	-
NOS3	0	genome.wustl.edu	37	7	150697610	150697610	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	7	150697610	150697610	G	T	SNP	NOS3	ENST00000297494	human	ensembl	69_37n	+1	known	missense	c.1156	p.D386Y	1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_met	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_met,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS3	HGNC	ENSG00000164867	61	0	0.00	60	36	37.50	-	-	-
OR2T10	0	genome.wustl.edu	37	1	248756685	248756685	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	1	248756685	248756685	G	T	SNP	OR2T10	ENST00000330500	human	ensembl	69_37n	-1	known	missense	c.385	p.P129T	0.996	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR2T10	HGNC	ENSG00000184022	102	0	0.00	173	50	22.32	-	-	-
PIWIL3	0	genome.wustl.edu	37	22	25131779	25131779	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	22	25131779	25131779	C	A	SNP	PIWIL3	ENST00000332271	human	ensembl	69_37n	-1	known	missense	c.1530	p.W510C	0.944	superfamily_RNaseH-like_dom	pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL3	HGNC	ENSG00000184571	160	0	0.00	33	63	65.62	-	-	-
RALGAPB	0	genome.wustl.edu	37	20	37177429	37177429	+	Silent	SNP	A	A	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	20	37177429	37177429	A	T	SNP	RALGAPB	ENST00000262879	human	ensembl	69_37n	+1	known	silent	c.3000	p.A1000	0.996	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP	-	no_errors	RALGAPB	HGNC	ENSG00000170471	100	0	0.00	87	57	39.58	-	-	-
SLC5A11	0	genome.wustl.edu	37	16	24921651	24921651	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	16	24921651	24921651	C	T	SNP	SLC5A11	ENST00000347898	human	ensembl	69_37n	+1	known	missense	c.1675	p.R559C	0.996	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A11	HGNC	ENSG00000158865	79	0	0.00	118	58	32.95	-	-	-
STK11	0	genome.wustl.edu	37	19	1218492	1218492	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	19	1218492	1218492	C	T	SNP	STK11	ENST00000326873	human	ensembl	69_37n	+1	known	nonsense	c.367	p.Q123*	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	STK11	HGNC	ENSG00000118046	91	0	0.00	12	40	76.92	-	-	-
TP53	0	genome.wustl.edu	37	17	7577120	7577120	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	17	7577120	7577120	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.818	p.R273H	0.864	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	102	0	0.00	30	59	65.56	-	-	-
TRDN	0	genome.wustl.edu	37	6	123892166	123892166	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	6	123892166	123892166	C	T	SNP	TRDN	ENST00000398178	human	ensembl	69_37n	-1	known	missense	c.134	p.S45N	1.000	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439	55	0	0.00	73	39	34.82	-	-	-
USP25	0	genome.wustl.edu	37	21	17242407	17242407	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	21	17242407	17242407	G	A	SNP	USP25	ENST00000449491	human	ensembl	69_37n	+1	putative	missense	c.512	p.G171E	0.924	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon	USP25	HGNC	ENSG00000155313	65	0	0.00	39	17	30.36	-	-	-
WDR27	0	genome.wustl.edu	37	6	170070709	170070709	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	6	170070709	170070709	C	A	SNP	WDR27	ENST00000448612	human	ensembl	69_37n	-1	known	missense	c.412	p.V138F	0.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR27	HGNC	ENSG00000184465	63	0	0.00	78	58	42.65	-	-	-
XAB2	0	genome.wustl.edu	37	19	7688749	7688749	+	Silent	SNP	C	C	G			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	19	7688749	7688749	C	G	SNP	XAB2	ENST00000358368	human	ensembl	69_37n	-1	known	silent	c.987	p.L329	0.997	NULL	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924	37	0	0.00	17	11	39.29	-	-	-
YY1AP1	0	genome.wustl.edu	37	1	155630341	155630341	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	1	155630341	155630341	T	C	SNP	YY1AP1	ENST00000368339	human	ensembl	69_37n	-1	known	missense	c.1774	p.I592V	0.784	NULL	NULL	-	no_errors	YY1AP1	HGNC	ENSG00000163374	100	0	0.00	114	43	27.39	-	-	-
ZC3H12B	0	genome.wustl.edu	37	X	64721696	64721696	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	X	64721696	64721696	G	A	SNP	ZC3H12B	ENST00000338957	human	ensembl	69_37n	+1	known	missense	c.1118	p.C373Y	1.000	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12B	HGNC	ENSG00000102053	15	0	0.00	17	5	22.73	-	-	-
ZMYND10	0	genome.wustl.edu	37	3	50379059	50379059	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JM-01A-11D-A13L-09	TCGA-D8-A1JM-10A-01D-A188-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f66d4178-34f3-4f5d-aa0a-7fdd03801033	cc160618-dacb-4809-92d6-78503671cd60	3	50379059	50379059	C	G	SNP	ZMYND10	ENST00000231749	human	ensembl	69_37n	-1	known	missense	c.1193	p.S398T	0.079	pfam_Znf_MYND,pirsf_UCP037948_Znf-MYND,pfscan_Znf_MYND	pfam_Znf_MYND,pirsf_UCP037948_Znf-MYND,pfscan_Znf_MYND	-	no_errors	ZMYND10	HGNC	ENSG00000004838	97	0	0.00	22	56	71.79	-	-	-
