Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AGAP7	0	genome.wustl.edu	37	10	51464656	51464656	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	10	51464656	51464656	G	C	SNP	AGAP7	ENST00000374095	human	ensembl	69_37n	-1	known	missense	c.1800	p.D600E	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP7	HGNC	ENSG00000204169	13	0	0.00	29	12	29.27	-	-	-
ATP8B3	0	genome.wustl.edu	37	19	1802626	1802626	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	19	1802626	1802626	G	A	SNP	ATP8B3	ENST00000539485	human	ensembl	69_37n	-1	known	missense	c.923	p.A308V	0.888	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP8B3	HGNC	ENSG00000130270	53	0	0.00	87	32	26.67	-	-	-
CAND1	0	genome.wustl.edu	37	12	67696173	67696173	+	Silent	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	12	67696173	67696173	G	A	SNP	CAND1	ENST00000299218	human	ensembl	69_37n	+1	known	silent	c.1071	p.L357	1.000	superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND1	HGNC	ENSG00000111530	119	0	0.00	144	48	25.00	-	-	-
CCIN	0	genome.wustl.edu	37	9	36169514	36169514	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	9	36169514	36169514	C	A	SNP	CCIN	ENST00000335119	human	ensembl	69_37n	+1	known	missense	c.15	p.F5L	1.000	superfamily_BTB/POZ_fold	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	CCIN	HGNC	ENSG00000185972	56	0	0.00	57	27	32.14	-	-	-
CD1B	0	genome.wustl.edu	37	1	158299878	158299878	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	1	158299878	158299878	G	C	SNP	CD1B	ENST00000368168	human	ensembl	69_37n	-1	known	missense	c.371	p.S124C	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	CD1B	HGNC	ENSG00000158485	65	0	0.00	81	23	22.12	-	-	-
CDH1	0	genome.wustl.edu	37	16	68845685	68845686	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	16	68845685	68845686	-	T	INS	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_ins	c.931_932	p.D313fs	0.000:0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	55	0	0.00	57	28	32.94	-	-	-
CELSR3	0	genome.wustl.edu	37	3	48694417	48694417	+	Silent	SNP	T	T	C			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	48694417	48694417	T	C	SNP	CELSR3	ENST00000544264	human	ensembl	69_37n	-1	known	silent	c.4113	p.V1371	1.000	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EGF-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	8	0	0.00	23	8	25.81	-	-	-
CSRNP1	0	genome.wustl.edu	37	3	39185716	39185716	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	39185716	39185716	C	T	SNP	CSRNP1	ENST00000273153	human	ensembl	69_37n	-1	known	missense	c.692	p.R231H	1.000	prints_Cys/Ser-rich_nuc_prot	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP1	HGNC	ENSG00000144655	16	0	0.00	34	18	34.62	-	-	-
EFR3B	0	genome.wustl.edu	37	2	25358396	25358396	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	2	25358396	25358396	C	T	SNP	EFR3B	ENST00000403714	human	ensembl	69_37n	+1	known	missense	c.1372	p.R458C	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	EFR3B	HGNC	ENSG00000084710	85	0	0.00	142	59	29.35	-	-	-
ETV7	0	genome.wustl.edu	37	6	36334453	36334453	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	6	36334453	36334453	A	G	SNP	ETV7	ENST00000340181	human	ensembl	69_37n	-1	known	missense	c.995	p.F332S	0.891	NULL	pfam_Ets,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ETV7	HGNC	ENSG00000010030	71	0	0.00	146	48	24.62	-	-	-
FLNA	0	genome.wustl.edu	37	X	153599398	153599398	+	Silent	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	X	153599398	153599398	G	A	SNP	FLNA	ENST00000369850	human	ensembl	69_37n	-1	known	silent	c.216	p.S72	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924	12	0	0.00	68	21	23.60	-	-	-
GLB1L3	0	genome.wustl.edu	37	11	134179638	134179638	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	11	134179638	134179638	G	A	SNP	GLB1L3	ENST00000455971	human	ensembl	69_37n	+1	known	missense	c.134	p.R45Q	0.000	pfam_Glycoside_Hdrlase_35,superfamily_Glycoside_hydrolase_SF,prints_Glycoside_Hdrlase_35	pfam_Glycoside_Hdrlase_35,superfamily_Glycoside_hydrolase_SF,prints_Glycoside_Hdrlase_35	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	GLB1L3	HGNC	ENSG00000166105	113	0	0.00	119	36	23.23	-	-	-
KLHL21	0	genome.wustl.edu	37	1	6659504	6659504	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	1	6659504	6659504	C	T	SNP	KLHL21	ENST00000377658	human	ensembl	69_37n	-1	known	missense	c.1030	p.D344N	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL21	HGNC	ENSG00000162413	17	0	0.00	40	8	16.67	-	-	-
MARVELD2	0	genome.wustl.edu	37	5	68728474	68728474	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	5	68728474	68728474	A	G	SNP	MARVELD2	ENST00000325631	human	ensembl	69_37n	+1	known	missense	c.1303	p.K435E	0.991	NULL	pfam_Occludin_RNApol2_elong_fac_ELL,pfam_MARVEL-like_dom	-	no_errors	MARVELD2	HGNC	ENSG00000152939	76	0	0.00	91	18	16.51	-	-	-
NRK	0	genome.wustl.edu	37	X	105152945	105152945	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	X	105152945	105152945	C	T	SNP	NRK	ENST00000428173	human	ensembl	69_37n	+1	known	nonsense	c.1315	p.R439*	0.001	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_cat_dom	-	no_errors	NRK	HGNC	ENSG00000123572	11	0	0.00	46	12	20.69	-	-	-
ODZ4	0	genome.wustl.edu	37	11	78775887	78775887	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	11	78775887	78775887	C	T	SNP	ODZ4	ENST00000278550	human	ensembl	69_37n	-1	known	missense	c.389	p.R130H	1.000	pfam_Ten_N	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	ODZ4	HGNC	ENSG00000149256	14	0	0.00	14	5	26.32	-	-	-
PCDHB7	0	genome.wustl.edu	37	5	140553401	140553401	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	5	140553401	140553401	G	A	SNP	PCDHB7	ENST00000231137	human	ensembl	69_37n	+1	known	missense	c.985	p.G329R	0.008	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	51	0	0.00	56	19	25.33	-	-	-
PHACTR3	0	genome.wustl.edu	37	20	58342410	58342410	+	Silent	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	20	58342410	58342410	G	A	SNP	PHACTR3	ENST00000371015	human	ensembl	69_37n	+1	known	silent	c.711	p.P237	0.667	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR3	HGNC	ENSG00000087495	19	0	0.00	14	4	22.22	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178938934	178938934	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	178938934	178938934	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.2176	p.E726K	1.000	superfamily_Kinase-like_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	125	0	0.00	116	30	20.55	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	118	0	0.00	104	35	25.18	-	-	-
REEP3	0	genome.wustl.edu	37	10	65380602	65380602	+	Silent	SNP	G	G	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	10	65380602	65380602	G	T	SNP	REEP3	ENST00000373758	human	ensembl	69_37n	+1	known	silent	c.741	p.V247	1.000	NULL	pfam_TB2_DP1_HVA22	-	no_errors	REEP3	HGNC	ENSG00000165476	187	0	0.00	155	37	19.27	-	-	-
RLF	0	genome.wustl.edu	37	1	40705088	40705088	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	1	40705088	40705088	C	T	SNP	RLF	ENST00000372771	human	ensembl	69_37n	+1	known	missense	c.4714	p.R1572C	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RLF	HGNC	ENSG00000117000	64	0	0.00	51	23	31.08	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037843	10037843	+	RNA	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	Y	10037843	10037843	C	T	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	20	0	0.00	18	4	18.18	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037883	10037883	+	RNA	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	Y	10037883	10037883	G	A	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	20	0	0.00	18	4	18.18	-	-	-
SF3B1	0	genome.wustl.edu	37	2	198266493	198266493	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	2	198266493	198266493	A	T	SNP	SF3B1	ENST00000335508	human	ensembl	69_37n	-1	known	missense	c.2343	p.D781E	1.000	superfamily_ARM-type_fold	pfam_SF3b_su1,superfamily_ARM-type_fold	-	no_errors	SF3B1	HGNC	ENSG00000115524	353	0	0.00	179	43	19.37	-	-	-
STAG1	0	genome.wustl.edu	37	3	136088052	136088052	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	136088052	136088052	G	A	SNP	STAG1	ENST00000383202	human	ensembl	69_37n	-1	known	nonsense	c.2443	p.Q815*	1.000	NULL	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG1	HGNC	ENSG00000118007	112	0	0.00	88	45	33.83	-	-	-
SUPT6H	0	genome.wustl.edu	37	17	27014157	27014157	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	17	27014157	27014157	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	69_37n	+1	known	missense	c.2752	p.R918W	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111	32	0	0.00	49	25	33.78	-	-	-
ZNF99	0	genome.wustl.edu	37	19	22940742	22940742	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	19	22940742	22940742	C	A	SNP	ZNF99	ENST00000397104	human	ensembl	69_37n	-1	known	missense	c.1696	p.A566S	0.824	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973	75	0	0.00	56	30	34.88	-	-	-
