Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC8	0	genome.wustl.edu	37	11	17418752	17418752	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	11	17418752	17418752	C	T	SNP	ABCC8	ENST00000302539	human	ensembl	69_37n	-1	known	missense	c.3979	p.E1327K	1.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCC8	HGNC	ENSG00000006071	128	0	0.00	38	10	20.83	-	-	-
ALDH1L1	0	genome.wustl.edu	37	3	125828868	125828868	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	3	125828868	125828868	C	A	SNP	ALDH1L1	ENST00000393434	human	ensembl	69_37n	-1	known	missense	c.2266	p.V756L	0.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L1	HGNC	ENSG00000144908	316	0	0.00	62	29	31.87	-	-	-
ATP2A2	0	genome.wustl.edu	37	12	110781179	110781179	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	12	110781179	110781179	C	T	SNP	ATP2A2	ENST00000539276	human	ensembl	69_37n	+1	known	missense	c.2461	p.R821W	1.000	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Ca-transp	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,prints_ATPase_P-typ_H-transp,prints_ATPase_P-typ_cation-exchng_asu,tigrfam_ATPase_P-typ_Ca-transp,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2A2	HGNC	ENSG00000174437	130	0	0.00	81	15	15.62	-	-	-
ATXN7L1	0	genome.wustl.edu	37	7	105255024	105255024	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	7	105255024	105255024	T	A	SNP	ATXN7L1	ENST00000419735	human	ensembl	69_37n	-1	known	missense	c.1757	p.H586L	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L1	HGNC	ENSG00000146776	608	0	0.00	233	56	19.31	-	-	-
B4GALT1	0	genome.wustl.edu	37	9	33135287	33135287	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	9	33135287	33135287	G	A	SNP	B4GALT1	ENST00000379731	human	ensembl	69_37n	-1	known	missense	c.548	p.P183L	1.000	pfam_Galactosyl_T_2_met	pfam_Galactosyl_T_2_met,prints_Galactosyl_T_2_met	-	no_errors	B4GALT1	HGNC	ENSG00000086062	220	0	0.00	37	20	35.09	-	-	-
CELSR3	0	genome.wustl.edu	37	3	48699138	48699138	+	Silent	SNP	C	C	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	3	48699138	48699138	C	T	SNP	CELSR3	ENST00000544264	human	ensembl	69_37n	-1	known	silent	c.930	p.A310	0.000	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EGF-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	24	0	0.00	13	5	27.78	-	-	-
CYP4A22	0	genome.wustl.edu	37	1	47610236	47610236	+	Silent	SNP	C	C	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	1	47610236	47610236	C	T	SNP	CYP4A22	ENST00000371891	human	ensembl	69_37n	+1	known	silent	c.912	p.S304	0.996	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP4A22	HGNC	ENSG00000162365	549	0	0.00	239	28	10.49	-	-	-
EIF4G3	0	genome.wustl.edu	37	1	21167444	21167444	+	Silent	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	1	21167444	21167444	G	A	SNP	EIF4G3	ENST00000374937	human	ensembl	69_37n	-1	known	silent	c.3816	p.T1272	1.000	pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_Initiation_fac_eIF4g_MI	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G3	HGNC	ENSG00000075151	223	0	0.00	137	21	13.29	-	-	-
EXOC6	0	genome.wustl.edu	37	10	94653133	94653133	+	Silent	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	10	94653133	94653133	G	A	SNP	EXOC6	ENST00000371547	human	ensembl	69_37n	+1	known	silent	c.177	p.A59	0.994	pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6	HGNC	ENSG00000138190	206	1	0.48	76	25	24.75	-	-	-
EXOC6B	0	genome.wustl.edu	37	2	72406489	72406489	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	2	72406489	72406489	C	G	SNP	EXOC6B	ENST00000272427	human	ensembl	69_37n	-1	known	missense	c.2411	p.G804A	1.000	pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6B	HGNC	ENSG00000144036	425	0	0.00	174	35	16.75	-	-	-
FAM157B	0	genome.wustl.edu	37	9	141107536	141107537	+	RNA	INS	-	-	GCA			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	9	141107536	141107537	-	GCA	INS	FAM157B	ENST00000446912	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.033:0.036	-	-	-	no_errors	FAM157B	HGNC	ENSG00000233013	82	0	0.00	67	16	19.28	-	-	-
GATA3	0	genome.wustl.edu	37	10	8115874	8115875	+	Frame_Shift_Ins	INS	-	-	G			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	10	8115874	8115875	-	G	INS	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1223_1224	p.P409fs	0.903:0.359	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	193	0	0.00	73	25	25.51	-	-	-
HAPLN2	0	genome.wustl.edu	37	1	156593871	156593872	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	1	156593871	156593872	-	T	INS	HAPLN2	ENST00000255039	human	ensembl	69_37n	+1	known	frame_shift_ins	c.358_359	p.E121fs	1.000:1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like,prints_Link	-	no_errors	HAPLN2	HGNC	ENSG00000132702	26	0	0.00	5	2	28.57	-	-	-
ITPKC	0	genome.wustl.edu	37	19	41235234	41235234	+	Silent	SNP	G	G	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	19	41235234	41235234	G	T	SNP	ITPKC	ENST00000263370	human	ensembl	69_37n	+1	known	silent	c.1383	p.L461	0.998	NULL	pfam_IPK	-	no_errors	ITPKC	HGNC	ENSG00000086544	181	0	0.00	51	16	23.88	-	-	-
ITSN1	0	genome.wustl.edu	37	21	35183459	35183459	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	21	35183459	35183459	G	A	SNP	ITSN1	ENST00000381285	human	ensembl	69_37n	+1	known	missense	c.2500	p.A834T	0.599	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_Ca-dep,superfamily_DH-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_SH3_domain,smart_EPS15_homology,smart_EF_hand_Ca-bd,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_Ca-dep,prints_SH3_domain,prints_p67phox,pfscan_EF_HAND_2,pfscan_EPS15_homology,pfscan_C2_membr_targeting,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ITSN1	HGNC	ENSG00000205726	137	0	0.00	75	13	14.44	-	-	-
KIAA1614	0	genome.wustl.edu	37	1	180904418	180904418	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	1	180904418	180904418	G	A	SNP	KIAA1614	ENST00000367588	human	ensembl	69_37n	+1	known	missense	c.1373	p.R458H	0.000	NULL	NULL	-	no_errors	KIAA1614	HGNC	ENSG00000135835	10	0	0.00	4	4	50.00	-	-	-
KIF1A	0	genome.wustl.edu	37	2	241662889	241662889	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	2	241662889	241662889	T	A	SNP	KIF1A	ENST00000498729	human	ensembl	69_37n	-1	known	missense	c.4405	p.S1469C	0.998	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,prints_Kinesin_motor_dom,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294	64	0	0.00	21	4	16.00	-	-	-
KLK7	0	genome.wustl.edu	37	19	51483714	51483714	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	19	51483714	51483714	G	A	SNP	KLK7	ENST00000304045	human	ensembl	69_37n	-1	known	missense	c.251	p.T84M	0.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	KLK7	HGNC	ENSG00000169035	303	0	0.00	92	19	16.96	-	-	-
LGALS8	0	genome.wustl.edu	37	1	236706922	236706924	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	1	236706922	236706924	AGG	-	DEL	LGALS8	ENST00000352231	human	ensembl	69_37n	+1	known	in_frame_del	c.738_740	p.G247in_frame_del	1.000:1.000:1.000	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl,smart_Galectin_CRD	-	no_errors	LGALS8	HGNC	ENSG00000116977	210	0	0.00	105	42	28.38	-	-	-
MOGAT3	0	genome.wustl.edu	37	7	100839243	100839243	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	7	100839243	100839243	C	A	SNP	MOGAT3	ENST00000223114	human	ensembl	69_37n	-1	known	missense	c.1010	p.C337F	0.011	pfam_DAGAT	pfam_DAGAT	-	no_errors	MOGAT3	HGNC	ENSG00000106384	143	1	0.69	47	35	42.68	-	-	-
NEUROG3	0	genome.wustl.edu	37	10	71332756	71332756	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	10	71332756	71332756	C	G	SNP	NEUROG3	ENST00000242462	human	ensembl	69_37n	-1	known	missense	c.44	p.R15P	0.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	NEUROG3	HGNC	ENSG00000122859	25	0	0.00	5	6	54.55	-	-	-
NUDT8	0	genome.wustl.edu	37	11	67396411	67396411	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	11	67396411	67396411	C	-	DEL	NUDT8	ENST00000376693	human	ensembl	69_37n	-1	known	frame_shift_del	c.306	p.L103fs	0.040	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT8	HGNC	ENSG00000167799	50	0	0.00	14	2	12.50	-	-	-
NUP160	0	genome.wustl.edu	37	11	47808045	47808045	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	11	47808045	47808045	C	T	SNP	NUP160	ENST00000378460	human	ensembl	69_37n	-1	known	missense	c.3808	p.A1270T	1.000	NULL	pfam_Nucleoporin_Nup160	-	no_errors	NUP160	HGNC	ENSG00000030066	121	0	0.00	66	16	19.51	-	-	-
PSAP	0	genome.wustl.edu	37	10	73594255	73594255	+	Silent	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	10	73594255	73594255	G	A	SNP	PSAP	ENST00000373120	human	ensembl	69_37n	-1	known	silent	c.48	p.A16	0.010	pirsf_Saposin_chordata	pirsf_Saposin_chordata,pfam_SapB_1,pfam_SapB_2,pfam_SapA,superfamily_Saposin-like,smart_SapA,smart_SaposinB,prints_Saposin,pfscan_SapA,pfscan_SaposinB	-	no_errors	PSAP	HGNC	ENSG00000197746	98	0	0.00	34	4	10.53	-	-	-
PTMS	0	genome.wustl.edu	37	12	6879111	6879111	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	12	6879111	6879111	G	T	SNP	PTMS	ENST00000309083	human	ensembl	69_37n	+1	known	nonsense	c.142	p.E48*	1.000	pfam_Pro/parathymosin	pfam_Pro/parathymosin	-	no_errors	PTMS	HGNC	ENSG00000159335	185	1	0.54	182	22	10.73	-	-	-
PTMS	0	genome.wustl.edu	37	12	6879322	6879322	+	Splice_Site	SNP	G	G	C			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	12	6879322	6879322	G	C	SNP	PTMS	ENST00000389462	human	ensembl	69_37n	+1	known	splice_site	c.274-1	e4-1	1.000	-	-	-	no_errors	PTMS	HGNC	ENSG00000159335	110	0	0.00	122	17	12.14	-	-	-
SPAG5	0	genome.wustl.edu	37	17	26919888	26919888	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	17	26919888	26919888	T	A	SNP	SPAG5	ENST00000321765	human	ensembl	69_37n	-1	known	missense	c.374	p.Y125F	0.000	NULL	NULL	-	no_errors	SPAG5	HGNC	ENSG00000076382	487	0	0.00	233	55	19.10	-	-	-
TBC1D4	0	genome.wustl.edu	37	13	75933979	75933980	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	13	75933979	75933980	TC	-	DEL	TBC1D4	ENST00000377636	human	ensembl	69_37n	-1	known	frame_shift_del	c.1096_1095	p.E365fs	1.000:1.000	pfam_PTyr_interaction_dom,smart_PTyr_interaction_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTyr_interaction_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTyr_interaction_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTyr_interaction_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111	97	0	0.00	79	14	14.89	-	-	-
TTN	0	genome.wustl.edu	37	2	179429426	179429426	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	2	179429426	179429426	A	C	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.73729	p.F24577V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	105	0	0.00	52	20	27.78	-	-	-
UBR7	0	genome.wustl.edu	37	14	93686624	93686624	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	14	93686624	93686624	C	-	DEL	UBR7	ENST00000013070	human	ensembl	69_37n	+1	known	frame_shift_del	c.990	p.L331fs	1.000	NULL	pfam_Znf_N-recognin,superfamily_Znf_FYVE_PHD,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR7	HGNC	ENSG00000012963	68	0	0.00	38	11	21.15	-	-	-
USP31	0	genome.wustl.edu	37	16	23096260	23096260	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	16	23096260	23096260	C	T	SNP	USP31	ENST00000219689	human	ensembl	69_37n	-1	known	missense	c.1751	p.R584H	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP31	HGNC	ENSG00000103404	270	0	0.00	91	30	24.59	-	-	-
ZBTB42	0	genome.wustl.edu	37	14	105268210	105268210	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	14	105268210	105268210	G	A	SNP	ZBTB42	ENST00000342537	human	ensembl	69_37n	+1	known	missense	c.676	p.E226K	0.992	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB42	HGNC	ENSG00000179627	24	0	0.00	6	9	60.00	-	-	-
ZNF239	0	genome.wustl.edu	37	10	44052732	44052732	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	14c1c6b6-575e-416b-b219-15552b62ea74	8e0edd30-4ae0-4245-bd91-0ae937ae0599	10	44052732	44052732	C	G	SNP	ZNF239	ENST00000306006	human	ensembl	69_37n	-1	known	missense	c.796	p.D266H	0.426	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF239	HGNC	ENSG00000196793	370	0	0.00	115	35	23.33	-	-	-
