Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA7	0	genome.wustl.edu	37	19	1053382	1053382	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	1053382	1053382	T	G	SNP	ABCA7	ENST00000263094	human	ensembl	69_37n	+1	known	missense	c.3275	p.V1092G	0.997	NULL	pfam_ABC_transporter-like,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687	45	0	0.00	8	11	57.89	-	-	-
AKAP3	0	genome.wustl.edu	37	12	4736391	4736391	+	Silent	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	4736391	4736391	A	G	SNP	AKAP3	ENST00000228850	human	ensembl	69_37n	-1	known	silent	c.1677	p.F559	0.000	pfam_AKAP_110_C,smart_AKAP_110	pfam_AKAP_110_C,pfam_RII_binding_1,smart_AKAP_110	-	no_errors	AKAP3	HGNC	ENSG00000111254	98	0	0.00	63	32	33.68	-	-	-
ANKRD27	0	genome.wustl.edu	37	19	33098731	33098731	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	33098731	33098731	G	C	SNP	ANKRD27	ENST00000306065	human	ensembl	69_37n	-1	known	missense	c.2183	p.A728G	0.167	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_VPS9,superfamily_Ankyrin_rpt-contain_dom,smart_VPS9_subgr,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_VPS9,prints_Ankyrin_rpt	-	no_errors	ANKRD27	HGNC	ENSG00000105186	72	0	0.00	18	22	55.00	-	-	-
ANKRD30A	0	genome.wustl.edu	37	10	37486216	37486216	+	Silent	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	10	37486216	37486216	C	G	SNP	ANKRD30A	ENST00000361713	human	ensembl	69_37n	+1	known	silent	c.2454	p.P818	0.011	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	607	0	0.00	378	347	47.73	-	-	-
ANKRD30A	0	genome.wustl.edu	37	10	37486216	37486216	+	Silent	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	10	37486216	37486216	C	G	SNP	ANKRD30A	ENST00000361713	human	ensembl	69_37n	+1	known	silent	c.2454	p.P818	0.011	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	67	0	0.00	378	347	47.73	-	-	-
APH1A	0	genome.wustl.edu	37	1	150238892	150238892	+	RNA	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	150238892	150238892	T	G	SNP	APH1A	ENST00000461320	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	APH1A	HGNC	ENSG00000117362	68	0	0.00	19	23	53.49	-	-	-
APOBEC3H	0	genome.wustl.edu	37	22	39498014	39498014	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	39498014	39498014	T	G	SNP	APOBEC3H	ENST00000442487	human	ensembl	69_37n	+1	known	missense	c.510	p.S170R	0.000	pfam_APOBEC_C	pfam_APOBEC_N,pfam_APOBEC_C,pfam_CMP_dCMP_Zn-bd,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC3H	HGNC	ENSG00000100298	129	0	0.00	56	13	17.81	-	-	-
ASB10	0	genome.wustl.edu	37	7	150884015	150884015	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	7	150884015	150884015	C	G	SNP	ASB10	ENST00000422024	human	ensembl	69_37n	-1	known	missense	c.338	p.G113A	0.922	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB10	HGNC	ENSG00000146926	90	0	0.00	26	21	44.68	-	-	-
ASB9	0	genome.wustl.edu	37	X	15262576	15262576	+	RNA	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	15262576	15262576	C	A	SNP	ASB9	ENST00000473862	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ASB9	HGNC	ENSG00000102048	70	0	0.00	98	89	47.59	-	-	-
ATG9B	0	genome.wustl.edu	37	7	150721193	150721193	+	RNA	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	7	150721193	150721193	T	G	SNP	ATG9B	ENST00000377974	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATG9B	HGNC	ENSG00000181652	44	0	0.00	25	21	45.65	-	-	-
ATP8B3	0	genome.wustl.edu	37	19	1782989	1782989	+	RNA	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	1782989	1782989	T	G	SNP	ATP8B3	ENST00000546207	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATP8B3	HGNC	ENSG00000130270	44	0	0.00	50	49	49.00	-	-	-
BARHL1	0	genome.wustl.edu	37	9	135458334	135458334	+	Silent	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	135458334	135458334	G	C	SNP	BARHL1	ENST00000263610	human	ensembl	69_37n	+1	known	silent	c.150	p.S50	0.932	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	BARHL1	HGNC	ENSG00000125492	51	0	0.00	20	19	48.72	-	-	-
BCAT2	0	genome.wustl.edu	37	19	49303276	49303276	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	49303276	49303276	T	G	SNP	BCAT2	ENST00000316273	human	ensembl	69_37n	-1	known	missense	c.493	p.T165P	0.914	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	-	no_errors	BCAT2	HGNC	ENSG00000105552	126	1	0.79	15	29	65.91	-	-	-
BTNL8	0	genome.wustl.edu	37	5	180335598	180335598	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	180335598	180335598	T	G	SNP	BTNL8	ENST00000340184	human	ensembl	69_37n	+1	known	missense	c.62	p.V21G	0.867	pfam_Ig_V-set	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like	-	no_errors	BTNL8	HGNC	ENSG00000113303	40	0	0.00	50	71	56.80	-	-	-
C11orf9	0	genome.wustl.edu	37	11	61544784	61544784	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	61544784	61544784	C	G	SNP	C11orf9	ENST00000278836	human	ensembl	69_37n	+1	known	missense	c.1639	p.R547G	1.000	NULL	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	-	no_errors	C11orf9	HGNC	ENSG00000124920	78	0	0.00	21	11	34.38	-	-	-
C15orf59	0	genome.wustl.edu	37	15	74032293	74032293	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	15	74032293	74032293	T	G	SNP	C15orf59	ENST00000379822	human	ensembl	69_37n	-1	known	missense	c.847	p.T283P	0.995	NULL	superfamily_Polyketide_synth_docking	-	no_errors	C15orf59	HGNC	ENSG00000205363	53	0	0.00	25	33	56.90	-	-	-
C1orf123	0	genome.wustl.edu	37	1	53683750	53683750	+	RNA	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	53683750	53683750	T	G	SNP	C1orf123	ENST00000478839	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C1orf123	HGNC	ENSG00000162384	30	0	0.00	20	36	63.16	-	-	-
C22orf13	0	genome.wustl.edu	37	22	24939827	24939827	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	24939827	24939827	T	G	SNP	C22orf13	ENST00000407471	human	ensembl	69_37n	-1	known	missense	c.611	p.N204T	1.000	pfam_Guanylyl_cyclase	pfam_Guanylyl_cyclase	-	no_errors	C22orf13	HGNC	ENSG00000138867	50	0	0.00	33	20	36.36	-	-	-
C3orf18	0	genome.wustl.edu	37	3	50603097	50603097	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	3	50603097	50603097	A	C	SNP	C3orf18	ENST00000357203	human	ensembl	69_37n	-1	known	missense	c.34	p.F12V	0.600	NULL	NULL	-	no_errors	C3orf18	HGNC	ENSG00000088543	73	0	0.00	37	36	48.65	-	-	-
C9orf142	0	genome.wustl.edu	37	9	139888352	139888352	+	RNA	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	139888352	139888352	A	C	SNP	C9orf142	ENST00000463765	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	C9orf142	HGNC	ENSG00000148362	30	0	0.00	26	30	50.85	-	-	-
CASZ1	0	genome.wustl.edu	37	1	10705025	10705025	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	10705025	10705025	C	G	SNP	CASZ1	ENST00000377022	human	ensembl	69_37n	-1	known	missense	c.3817	p.A1273P	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	91	0	0.00	107	27	20.00	-	-	-
CBX4	0	genome.wustl.edu	37	17	77809500	77809500	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	77809500	77809500	T	C	SNP	CBX4	ENST00000269397	human	ensembl	69_37n	-1	known	missense	c.191	p.E64G	1.000	superfamily_Chromodomain-like,pfscan_Chromo_domain/shadow	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,prints_Chromo_dom_subgr,pfscan_Chromo_domain/shadow	-	no_errors	CBX4	HGNC	ENSG00000141582	148	1	0.67	65	32	32.32	-	-	-
CCAR1	0	genome.wustl.edu	37	10	70496773	70496773	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	10	70496773	70496773	C	A	SNP	CCAR1	ENST00000265872	human	ensembl	69_37n	+1	known	missense	c.214	p.Q72K	1.000	NULL	pfam_SAP_DNA-bd,superfamily_NA-bd_OB-fold-like,smart_SAP_DNA-bd,pfscan_SAP_DNA-bd	-	no_errors	CCAR1	HGNC	ENSG00000060339	26	0	0.00	54	112	67.47	-	-	-
CCDC112	0	genome.wustl.edu	37	5	114611288	114611288	+	Silent	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	5	114611288	114611288	A	G	SNP	CCDC112	ENST00000379611	human	ensembl	69_37n	-1	known	silent	c.543	p.I181	1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	93	0	0.00	60	30	33.33	-	-	-
CCDC112	0	genome.wustl.edu	37	5	114611288	114611288	+	Silent	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	114611288	114611288	A	G	SNP	CCDC112	ENST00000379611	human	ensembl	69_37n	-1	known	silent	c.543	p.I181	1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	27	0	0.00	60	30	33.33	-	-	-
CCDC78	0	genome.wustl.edu	37	16	772688	772688	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	16	772688	772688	C	G	SNP	CCDC78	ENST00000345165	human	ensembl	69_37n	-1	putative	missense	c.949	p.A317P	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CCDC78	HGNC	ENSG00000162004	34	0	0.00	46	19	29.23	-	-	-
CCNF	0	genome.wustl.edu	37	16	2495482	2495482	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	16	2495482	2495482	T	G	SNP	CCNF	ENST00000397066	human	ensembl	69_37n	+1	known	missense	c.953	p.V318G	1.000	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,pfam_Cyclin_C,pfam_F-box_dom_cyclin-like,superfamily_Cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_Cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	CCNF	HGNC	ENSG00000162063	86	0	0.00	38	46	54.76	-	-	-
CENPB	0	genome.wustl.edu	37	20	3766022	3766022	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	20	3766022	3766022	G	C	SNP	CENPB	ENST00000379751	human	ensembl	69_37n	-1	known	missense	c.1109	p.A370G	0.949	pfam_DDE_SF_endonuclease_CENPB-like	pfam_Centromere_CenpB_dimerisation,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	CENPB	HGNC	ENSG00000125817	51	0	0.00	24	10	29.41	-	-	-
CHD5	0	genome.wustl.edu	37	1	6185196	6185196	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	6185196	6185196	A	C	SNP	CHD5	ENST00000262450	human	ensembl	69_37n	-1	known	missense	c.4358	p.V1453G	1.000	pfam_DUF1086	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254	173	1	0.57	59	46	43.40	-	-	-
CHRND	0	genome.wustl.edu	37	2	233393286	233393286	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	233393286	233393286	A	C	SNP	CHRND	ENST00000457943	human	ensembl	69_37n	+1	known	missense	c.158	p.H53P	0.140	NULL	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	-	no_errors	CHRND	HGNC	ENSG00000135902	64	0	0.00	236	57	19.39	-	-	-
CHRND	0	genome.wustl.edu	37	2	233399890	233399890	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	2	233399890	233399890	G	-	DEL	CHRND	ENST00000258385	human	ensembl	69_37n	+1	known	frame_shift_del	c.1422	p.F475fs	0.991	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRND	HGNC	ENSG00000135902	193	0	0.00	133	58	29.44	-	-	-
CHRND	0	genome.wustl.edu	37	2	233399890	233399890	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	233399890	233399890	G	-	DEL	CHRND	ENST00000258385	human	ensembl	69_37n	+1	known	frame_shift_del	c.1422	p.F475fs	0.991	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRND	HGNC	ENSG00000135902	78	0	0.00	133	58	29.44	-	-	-
CLK2	0	genome.wustl.edu	37	1	155238508	155238508	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	155238508	155238508	G	T	SNP	CLK2	ENST00000368361	human	ensembl	69_37n	-1	known	missense	c.478	p.Q160K	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CLK2	HGNC	ENSG00000176444	56	0	0.00	124	27	17.88	-	-	-
COX10	0	genome.wustl.edu	37	17	14110451	14110451	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	14110451	14110451	A	C	SNP	COX10	ENST00000261643	human	ensembl	69_37n	+1	known	missense	c.1253	p.H418P	1.000	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	-	no_errors	COX10	HGNC	ENSG00000006695	37	0	0.00	5	14	73.68	-	-	-
CRBN	0	genome.wustl.edu	37	3	3221322	3221322	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	3	3221322	3221322	T	G	SNP	CRBN	ENST00000231948	human	ensembl	69_37n	-1	known	missense	c.50	p.H17P	1.000	NULL	pfam_Pept_S16_N,superfamily_PUA-like_domain,smart_Pept_S16_N	-	no_errors	CRBN	HGNC	ENSG00000113851	107	1	0.93	18	26	57.78	-	-	-
CRYBA2	0	genome.wustl.edu	37	2	219856873	219856873	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	219856873	219856873	C	G	SNP	CRYBA2	ENST00000295728	human	ensembl	69_37n	-1	known	missense	c.254	p.S85T	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBA2	HGNC	ENSG00000163499	43	0	0.00	18	12	40.00	-	-	-
DCAF8	0	genome.wustl.edu	37	1	160209535	160209535	+	Silent	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	160209535	160209535	C	G	SNP	DCAF8	ENST00000555195	human	ensembl	69_37n	-1	known	silent	c.1137	p.R379	0.927	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Pex19,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF8	HGNC	ENSG00000132716	72	0	0.00	24	17	40.48	-	-	-
DNAH12	0	genome.wustl.edu	37	3	57414077	57414077	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	3	57414077	57414077	T	C	SNP	DNAH12	ENST00000351747	human	ensembl	69_37n	-1	known	missense	c.5282	p.Q1761R	0.012	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844	46	0	0.00	23	8	25.81	-	-	-
DNAH12	0	genome.wustl.edu	37	3	57414077	57414077	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	3	57414077	57414077	T	C	SNP	DNAH12	ENST00000351747	human	ensembl	69_37n	-1	known	missense	c.5282	p.Q1761R	0.012	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844	50	0	0.00	23	8	25.81	-	-	-
DNAH6	0	genome.wustl.edu	37	2	84838960	84838960	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	84838960	84838960	C	G	SNP	DNAH6	ENST00000237449	human	ensembl	69_37n	+1	known	missense	c.3457	p.R1153G	1.000	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423	25	0	0.00	36	72	66.67	-	-	-
DNAJB2	0	genome.wustl.edu	37	2	220144582	220144582	+	Silent	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	2	220144582	220144582	C	T	SNP	DNAJB2	ENST00000336576	human	ensembl	69_37n	+1	known	silent	c.27	p.D9	0.984	pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJB2	HGNC	ENSG00000135924	136	0	0.00	70	44	38.60	-	-	-
DNAJB2	0	genome.wustl.edu	37	2	220144582	220144582	+	Silent	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	220144582	220144582	C	T	SNP	DNAJB2	ENST00000336576	human	ensembl	69_37n	+1	known	silent	c.27	p.D9	0.984	pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJB2	HGNC	ENSG00000135924	46	0	0.00	70	44	38.60	-	-	-
DNAJB4	0	genome.wustl.edu	37	1	78478782	78478782	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	78478782	78478782	C	T	SNP	DNAJB4	ENST00000370763	human	ensembl	69_37n	+1	known	missense	c.259	p.R87W	1.000	NULL	pfam_DnaJ_C,pfam_DnaJ_N,superfamily_DnaJ_N,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJB4	HGNC	ENSG00000162616	65	0	0.00	225	26	10.36	-	-	-
DNTTIP2	0	genome.wustl.edu	37	1	94344542	94344542	+	RNA	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	94344542	94344542	T	G	SNP	DNTTIP2	ENST00000460191	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DNTTIP2	HGNC	ENSG00000067334	38	0	0.00	16	13	44.83	-	-	-
DPAGT1	0	genome.wustl.edu	37	11	118972221	118972221	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	118972221	118972221	T	G	SNP	DPAGT1	ENST00000354202	human	ensembl	69_37n	-1	known	missense	c.145	p.T49P	0.002	NULL	pfam_Glycosyl_transferase_4	-	no_errors	DPAGT1	HGNC	ENSG00000172269	64	0	0.00	46	11	19.30	-	-	-
DSPP	0	genome.wustl.edu	37	4	88536880	88536880	+	Silent	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	4	88536880	88536880	C	T	SNP	DSPP	ENST00000282478	human	ensembl	69_37n	+1	known	silent	c.3066	p.S1022	0.011	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	46	0	0.00	446	68	13.23	-	-	-
DSPP	0	genome.wustl.edu	37	4	88536886	88536886	+	Silent	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	4	88536886	88536886	C	T	SNP	DSPP	ENST00000282478	human	ensembl	69_37n	+1	known	silent	c.3072	p.S1024	0.076	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	45	0	0.00	378	111	22.70	-	-	-
EML2	0	genome.wustl.edu	37	19	46137720	46137720	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	46137720	46137720	G	T	SNP	EML2	ENST00000587152	human	ensembl	69_37n	-1	known	nonsense	c.792	p.Y264*	1.000	pfam_HELP,superfamily_Quinonprotein_ADH-like	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like,superfamily_Quinoprot_gluc/sorb_DH,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML2	HGNC	ENSG00000125746	121	0	0.00	46	39	45.88	-	-	-
ENSG00000256349	0	genome.wustl.edu	37	11	66288848	66288848	+	Splice_Site	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	66288848	66288848	G	T	SNP	ENSG00000256349	ENST00000419755	human	ensembl	69_37n	+1	known	splice_site	c.941+1	e9+1	1.000	-	-	-	no_errors	CTD-3074O7.11	Clone_based_vega_gene	ENSG00000256349	76	0	0.00	133	36	21.30	-	-	-
EPHA8	0	genome.wustl.edu	37	1	22919888	22919888	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	22919888	22919888	A	G	SNP	EPHA8	ENST00000166244	human	ensembl	69_37n	+1	known	missense	c.1385	p.E462G	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHA8	HGNC	ENSG00000070886	110	1	0.89	15	11	42.31	-	-	-
EXOC3L1	0	genome.wustl.edu	37	16	67218756	67218756	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	16	67218756	67218756	A	C	SNP	EXOC3L1	ENST00000563889	human	ensembl	69_37n	-1	novel	missense	c.1660	p.W554G	0.003	pfam_Sec6	pfam_Sec6	-	no_stop_codon	EXOC3L1	HGNC	ENSG00000179044	31	0	0.00	8	9	52.94	-	-	-
EXOSC2	0	genome.wustl.edu	37	9	133569210	133569210	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	133569210	133569210	G	C	SNP	EXOSC2	ENST00000372358	human	ensembl	69_37n	+1	known	missense	c.32	p.R11P	0.990	NULL	superfamily_NA-bd_OB-fold-like	-	no_errors	EXOSC2	HGNC	ENSG00000130713	50	0	0.00	12	22	64.71	-	-	-
FAM110C	0	genome.wustl.edu	37	2	45606	45606	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	45606	45606	G	A	SNP	FAM110C	ENST00000327669	human	ensembl	69_37n	-1	known	silent	c.780	p.F260	1.000	NULL	NULL	-	no_errors	FAM110C	HGNC	ENSG00000184731	89	0	0.00	16	14	46.67	-	-	-
FAM129B	0	genome.wustl.edu	37	9	130287426	130287426	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	130287426	130287426	A	C	SNP	FAM129B	ENST00000373312	human	ensembl	69_37n	-1	known	missense	c.332	p.V111G	0.324	pfscan_Pleckstrin_homology	pfscan_Pleckstrin_homology	-	no_errors	FAM129B	HGNC	ENSG00000136830	59	0	0.00	68	93	55.69	-	-	-
FZD5	0	genome.wustl.edu	37	2	208633326	208633326	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	208633326	208633326	G	T	SNP	FZD5	ENST00000295417	human	ensembl	69_37n	-1	known	nonsense	c.138	p.Y46*	1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD5	HGNC	ENSG00000163251	190	0	0.00	110	22	16.67	-	-	-
GABRA6	0	genome.wustl.edu	37	5	161116743	161116743	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	5	161116743	161116743	A	C	SNP	GABRA6	ENST00000274545	human	ensembl	69_37n	+1	known	missense	c.631	p.I211L	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa6_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA6	HGNC	ENSG00000145863	206	0	0.00	170	66	27.85	-	-	-
GABRA6	0	genome.wustl.edu	37	5	161116743	161116743	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	161116743	161116743	A	C	SNP	GABRA6	ENST00000274545	human	ensembl	69_37n	+1	known	missense	c.631	p.I211L	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa6_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA6	HGNC	ENSG00000145863	40	0	0.00	170	66	27.85	-	-	-
GCDH	0	genome.wustl.edu	37	19	13002672	13002672	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	13002672	13002672	A	G	SNP	GCDH	ENST00000222214	human	ensembl	69_37n	+1	known	missense	c.155	p.D52G	1.000	superfamily_AcylCoA_DH/oxidase	pfam_Acyl-CoA_Oxase/DH_1,pfam_Acyl-CoA_DH_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase,superfamily_AcylCo_DH/oxidase_C	-	no_errors	GCDH	HGNC	ENSG00000105607	51	0	0.00	26	22	44.90	-	-	-
GDAP1L1	0	genome.wustl.edu	37	20	42893238	42893238	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	20	42893238	42893238	A	C	SNP	GDAP1L1	ENST00000445952	human	ensembl	69_37n	+1	known	missense	c.638	p.H213P	0.121	NULL	superfamily_Thioredoxin-like_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	GDAP1L1	HGNC	ENSG00000124194	46	0	0.00	28	43	60.56	-	-	-
GIGYF2	0	genome.wustl.edu	37	2	233712266	233712266	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	233712266	233712266	G	C	SNP	GIGYF2	ENST00000373566	human	ensembl	69_37n	+1	known	missense	c.3735	p.Q1245H	0.053	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF2	HGNC	ENSG00000204120	61	0	0.00	12	24	66.67	-	-	-
GLI2	0	genome.wustl.edu	37	2	121747071	121747071	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	121747071	121747071	G	A	SNP	GLI2	ENST00000361492	human	ensembl	69_37n	+1	known	missense	c.3581	p.S1194N	0.039	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047	24	0	0.00	5	5	50.00	-	-	-
GMIP	0	genome.wustl.edu	37	19	19741085	19741085	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	19741085	19741085	C	G	SNP	GMIP	ENST00000203556	human	ensembl	69_37n	-1	known	missense	c.2600	p.R867P	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	GMIP	HGNC	ENSG00000089639	58	0	0.00	34	35	50.72	-	-	-
GOLGA2P5	0	genome.wustl.edu	37	12	100559710	100559710	+	RNA	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	100559710	100559710	T	G	SNP	GOLGA2P5	ENST00000421840	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GOLGA2P5	HGNC	ENSG00000238105	61	0	0.00	25	17	39.53	-	-	-
GPAM	0	genome.wustl.edu	37	10	113932823	113932823	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	10	113932823	113932823	G	T	SNP	GPAM	ENST00000348367	human	ensembl	69_37n	-1	known	missense	c.562	p.L188M	1.000	NULL	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	GPAM	HGNC	ENSG00000119927	59	0	0.00	324	39	10.74	-	-	-
GPRIN2	0	genome.wustl.edu	37	10	46999178	46999178	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	10	46999178	46999178	A	C	SNP	GPRIN2	ENST00000374314	human	ensembl	69_37n	+1	known	missense	c.298	p.T100P	0.084	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	11	0	0.00	13	7	35.00	-	-	-
GPS2	0	genome.wustl.edu	37	17	7217236	7217236	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	17	7217236	7217236	G	-	DEL	GPS2	ENST00000380728	human	ensembl	69_37n	-1	known	frame_shift_del	c.469	p.Q157fs	0.996	NULL	NULL	-	no_errors	GPS2	HGNC	ENSG00000132522	199	0	0.00	139	22	13.50	-	-	-
GRM3	0	genome.wustl.edu	37	7	86493622	86493622	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	7	86493622	86493622	C	T	SNP	GRM3	ENST00000361669	human	ensembl	69_37n	+1	known	missense	c.2591	p.T864M	1.000	prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt_2	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B,pfscan_GPCR_3_C	-	no_errors	GRM3	HGNC	ENSG00000198822	615	1	0.16	730	234	24.27	-	-	-
GRM3	0	genome.wustl.edu	37	7	86493622	86493622	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	7	86493622	86493622	C	T	SNP	GRM3	ENST00000361669	human	ensembl	69_37n	+1	known	missense	c.2591	p.T864M	1.000	prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt_2	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B,pfscan_GPCR_3_C	-	no_errors	GRM3	HGNC	ENSG00000198822	68	0	0.00	730	234	24.27	-	-	-
GUCY2F	0	genome.wustl.edu	37	X	108696999	108696999	+	Silent	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	108696999	108696999	A	C	SNP	GUCY2F	ENST00000218006	human	ensembl	69_37n	-1	known	silent	c.1122	p.G374	0.999	pfam_ANF_lig-bd_rcpt	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Haem_no_assoc-bd,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2F	HGNC	ENSG00000101890	61	0	0.00	103	69	39.66	-	-	-
HADH	0	genome.wustl.edu	37	4	108955557	108955557	+	RNA	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	4	108955557	108955557	T	C	SNP	HADH	ENST00000510728	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HADH	HGNC	ENSG00000138796	43	0	0.00	87	30	25.64	-	-	-
HARS	0	genome.wustl.edu	37	5	140058630	140058630	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	140058630	140058630	T	G	SNP	HARS	ENST00000504156	human	ensembl	69_37n	-1	known	missense	c.479	p.N160T	1.000	pfam_aa-tRNA-synt_IIb_cons-dom,pirsf_His-tRNA_synth_IIA,pfscan_aa-tRNA-synth_II,tigrfam_His-tRNA-synth_IIa_subgr	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_WHEP-TRS,superfamily_Anticodon-bd,superfamily_S15_NS1_RNA-bd,pirsf_His-tRNA_synth_IIA,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_His-tRNA-synth_IIa_subgr	-	no_errors	HARS	HGNC	ENSG00000170445	107	0	0.00	188	102	35.05	-	-	-
HAVCR1	0	genome.wustl.edu	37	5	156482504	156482504	+	Silent	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	156482504	156482504	A	C	SNP	HAVCR1	ENST00000425854	human	ensembl	69_37n	-1	known	silent	c.87	p.G29	0.186	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	HAVCR1	HGNC	ENSG00000113249	37	0	0.00	27	79	73.15	-	-	-
HCFC1	0	genome.wustl.edu	37	X	153220423	153220423	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	153220423	153220423	T	G	SNP	HCFC1	ENST00000310441	human	ensembl	69_37n	-1	known	missense	c.3427	p.T1143P	0.004	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	110	1	0.89	57	48	44.04	-	-	-
HCFC1	0	genome.wustl.edu	37	X	153220495	153220495	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	153220495	153220495	T	G	SNP	HCFC1	ENST00000310441	human	ensembl	69_37n	-1	known	missense	c.3355	p.T1119P	1.000	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	175	0	0.00	108	51	31.48	-	-	-
HDDC2	0	genome.wustl.edu	37	6	125598352	125598352	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	6	125598352	125598352	A	T	SNP	HDDC2	ENST00000398153	human	ensembl	69_37n	-1	known	missense	c.413	p.F138Y	0.997	pfam_HD_domain,smart_HD/PDEase_dom	pfam_HD_domain,smart_HD/PDEase_dom	-	no_errors	HDDC2	HGNC	ENSG00000111906	454	0	0.00	423	144	25.40	-	-	-
HDDC2	0	genome.wustl.edu	37	6	125598352	125598352	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	6	125598352	125598352	A	T	SNP	HDDC2	ENST00000398153	human	ensembl	69_37n	-1	known	missense	c.413	p.F138Y	0.997	pfam_HD_domain,smart_HD/PDEase_dom	pfam_HD_domain,smart_HD/PDEase_dom	-	no_errors	HDDC2	HGNC	ENSG00000111906	80	0	0.00	423	144	25.40	-	-	-
HK2	0	genome.wustl.edu	37	2	75105930	75105930	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	75105930	75105930	G	C	SNP	HK2	ENST00000290573	human	ensembl	69_37n	+1	known	missense	c.1147	p.A383P	0.997	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK2	HGNC	ENSG00000159399	45	0	0.00	10	12	54.55	-	-	-
IGFL3	0	genome.wustl.edu	37	19	46627331	46627331	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	19	46627331	46627331	G	A	SNP	IGFL3	ENST00000341415	human	ensembl	69_37n	-1	known	silent	c.162	p.C54	0.022	NULL	NULL	-	no_errors	IGFL3	HGNC	ENSG00000188624	100	0	0.00	86	25	22.52	-	-	-
IGFL3	0	genome.wustl.edu	37	19	46627331	46627331	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	46627331	46627331	G	A	SNP	IGFL3	ENST00000341415	human	ensembl	69_37n	-1	known	silent	c.162	p.C54	0.022	NULL	NULL	-	no_errors	IGFL3	HGNC	ENSG00000188624	31	0	0.00	86	25	22.52	-	-	-
IGHE	0	genome.wustl.edu	37	14	106067816	106067816	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	14	106067816	106067816	T	G	SNP	IGHE	ENST00000390541	human	ensembl	69_37n	-1	known	missense	c.250	p.T84P	0.992	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	-	no_start_codon	IGHE	HGNC	ENSG00000211891	102	0	0.00	162	72	30.64	-	-	-
IRF3	0	genome.wustl.edu	37	19	50165501	50165501	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	50165501	50165501	A	C	SNP	IRF3	ENST00000309877	human	ensembl	69_37n	-1	known	missense	c.686	p.V229G	1.000	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF3	HGNC	ENSG00000126456	75	0	0.00	26	13	33.33	-	-	-
KCNJ2	0	genome.wustl.edu	37	17	68171472	68171472	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	68171472	68171472	T	G	SNP	KCNJ2	ENST00000243457	human	ensembl	69_37n	+1	known	missense	c.292	p.F98V	1.000	pfam_K_chnl_inward-rec_Kir_Cr2,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir_Cr2	pfam_K_chnl_inward-rec_Kir_Cr2,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir_Cr2,prints_K_chnl_inward-rec_Kir2.1	-	no_errors	KCNJ2	HGNC	ENSG00000123700	199	0	0.00	130	19	12.75	-	-	-
KCNQ4	0	genome.wustl.edu	37	1	41296813	41296813	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	41296813	41296813	T	G	SNP	KCNQ4	ENST00000443478	human	ensembl	69_37n	+1	novel	missense	c.931	p.S311A	0.676	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	KCNQ4	HGNC	ENSG00000117013	59	0	0.00	20	16	43.24	-	-	-
KDM2A	0	genome.wustl.edu	37	11	66985085	66985085	+	RNA	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	66985085	66985085	A	G	SNP	KDM2A	ENST00000525379	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.082	-	-	-	no_errors	KDM2A	HGNC	ENSG00000173120	29	0	0.00	35	31	45.59	-	-	-
KLHL1	0	genome.wustl.edu	37	13	70281929	70281929	+	Splice_Site	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	13	70281929	70281929	C	T	SNP	KLHL1	ENST00000377844	human	ensembl	69_37n	-1	known	splice_site	c.2016-1	e10-1	1.000	-	-	-	no_errors	KLHL1	HGNC	ENSG00000150361	239	0	0.00	297	62	17.27	-	-	-
KLHL1	0	genome.wustl.edu	37	13	70281929	70281929	+	Splice_Site	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	13	70281929	70281929	C	T	SNP	KLHL1	ENST00000377844	human	ensembl	69_37n	-1	known	splice_site	c.2016-1	e10-1	1.000	-	-	-	no_errors	KLHL1	HGNC	ENSG00000150361	36	0	0.00	297	62	17.27	-	-	-
LCN12	0	genome.wustl.edu	37	9	139847492	139847492	+	RNA	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	139847492	139847492	T	G	SNP	LCN12	ENST00000484304	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	LCN12	HGNC	ENSG00000184925	117	1	0.80	24	51	48.11	-	-	-
LEFTY2	0	genome.wustl.edu	37	1	226125151	226125151	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	226125151	226125151	A	G	SNP	LEFTY2	ENST00000366820	human	ensembl	69_37n	-1	known	missense	c.1091	p.L364P	0.004	NULL	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,pirsf_LRDF,prints_LRDF	-	no_errors	LEFTY2	HGNC	ENSG00000143768	40	0	0.00	16	13	44.83	-	-	-
LPO	0	genome.wustl.edu	37	17	56332273	56332273	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	17	56332273	56332273	C	T	SNP	LPO	ENST00000262290	human	ensembl	69_37n	+1	known	nonsense	c.1207	p.Q403*	0.377	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	LPO	HGNC	ENSG00000167419	165	0	0.00	137	18	11.61	-	-	-
LPO	0	genome.wustl.edu	37	17	56332273	56332273	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	56332273	56332273	C	T	SNP	LPO	ENST00000262290	human	ensembl	69_37n	+1	known	nonsense	c.1207	p.Q403*	0.377	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	LPO	HGNC	ENSG00000167419	62	0	0.00	137	18	11.61	-	-	-
LRRC25	0	genome.wustl.edu	37	19	18507105	18507105	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	18507105	18507105	G	C	SNP	LRRC25	ENST00000339007	human	ensembl	69_37n	-1	known	missense	c.669	p.S223R	0.897	NULL	NULL	-	no_errors	LRRC25	HGNC	ENSG00000175489	79	0	0.00	20	32	60.38	-	-	-
LTBP3	0	genome.wustl.edu	37	11	65315445	65315445	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	65315445	65315445	A	G	SNP	LTBP3	ENST00000301873	human	ensembl	69_37n	-1	known	missense	c.1792	p.S598P	1.000	smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,pfam_TB_dom,superfamily_TB_dom,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056	93	0	0.00	25	19	43.18	-	-	-
LYNX1	0	genome.wustl.edu	37	8	143846046	143846046	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	8	143846046	143846046	T	G	SNP	LYNX1	ENST00000335822	human	ensembl	69_37n	-1	known	missense	c.373	p.T125P	0.981	pfam_LY6_UPAR	pfam_LY6_UPAR	-	no_errors	LYNX1	HGNC	ENSG00000180155	115	0	0.00	29	45	60.81	-	-	-
MRGPRX2	0	genome.wustl.edu	37	11	19077074	19077074	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	19077074	19077074	C	G	SNP	MRGPRX2	ENST00000329773	human	ensembl	69_37n	-1	known	missense	c.876	p.Q292H	0.000	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	MRGPRX2	HGNC	ENSG00000183695	33	0	0.00	35	45	56.25	-	-	-
MUC6	0	genome.wustl.edu	37	11	1024858	1024858	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	1024858	1024858	T	G	SNP	MUC6	ENST00000421673	human	ensembl	69_37n	-1	known	missense	c.3211	p.T1071P	0.168	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	32	0	0.00	4	11	68.75	-	-	-
MYBPC2	0	genome.wustl.edu	37	19	50957613	50957613	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	50957613	50957613	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	69_37n	+1	known	silent	c.2001	p.G667	0.993	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYBPC2	HGNC	ENSG00000086967	121	0	0.00	31	9	21.43	-	-	-
MYBPH	0	genome.wustl.edu	37	1	203144709	203144709	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	203144709	203144709	T	G	SNP	MYBPH	ENST00000255416	human	ensembl	69_37n	-1	known	missense	c.175	p.T59P	0.011	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYBPH	HGNC	ENSG00000133055	118	1	0.83	44	34	43.59	-	-	-
MYF5	0	genome.wustl.edu	37	12	81111101	81111101	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	81111101	81111101	G	C	SNP	MYF5	ENST00000228644	human	ensembl	69_37n	+1	known	missense	c.259	p.A87P	1.000	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_Basic,pfscan_HLH_DNA-bd	pfam_Basic,pfam_Myf5,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_Basic,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	MYF5	HGNC	ENSG00000111049	79	0	0.00	19	11	36.67	-	-	-
NCF4	0	genome.wustl.edu	37	22	37260160	37260160	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	37260160	37260160	A	C	SNP	NCF4	ENST00000397147	human	ensembl	69_37n	+1	known	missense	c.106	p.T36P	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,prints_NCF_P40,prints_p67phox,pfscan_Phox,pfscan_SH3_domain	-	no_errors	NCF4	HGNC	ENSG00000100365	58	0	0.00	19	46	70.77	-	-	-
NDST1	0	genome.wustl.edu	37	5	149915315	149915315	+	Silent	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	149915315	149915315	C	T	SNP	NDST1	ENST00000261797	human	ensembl	69_37n	+1	known	silent	c.1305	p.G435	0.923	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom	-	no_errors	NDST1	HGNC	ENSG00000070614	50	0	0.00	51	21	29.17	-	-	-
NFKBIE	0	genome.wustl.edu	37	6	44232797	44232797	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	6	44232797	44232797	C	G	SNP	NFKBIE	ENST00000275015	human	ensembl	69_37n	-1	known	missense	c.704	p.R235P	0.005	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	NFKBIE	HGNC	ENSG00000146232	102	0	0.00	26	18	40.91	-	-	-
NHS	0	genome.wustl.edu	37	X	17705940	17705940	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	17705940	17705940	T	C	SNP	NHS	ENST00000380060	human	ensembl	69_37n	+1	known	missense	c.644	p.L215P	0.994	NULL	NULL	-	no_errors	NHS	HGNC	ENSG00000188158	249	2	0.79	61	37	36.63	-	-	-
NID1	0	genome.wustl.edu	37	1	236141220	236141220	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	236141220	236141220	T	G	SNP	NID1	ENST00000264187	human	ensembl	69_37n	-1	known	missense	c.3691	p.T1231P	1.000	smart_EGF-like	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd,superfamily_Green_fluorescent_prot-like,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd,smart_EGF-like,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962	57	0	0.00	50	71	58.20	-	-	-
NOTCH3	0	genome.wustl.edu	37	19	15276624	15276624	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	15276624	15276624	T	G	SNP	NOTCH3	ENST00000263388	human	ensembl	69_37n	-1	known	missense	c.5641	p.T1881P	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt-contain_dom	pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_3,prints_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	65	0	0.00	15	19	55.88	-	-	-
NOTCH3	0	genome.wustl.edu	37	19	15291055	15291055	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	15291055	15291055	T	C	SNP	NOTCH3	ENST00000263388	human	ensembl	69_37n	-1	known	missense	c.3155	p.E1052G	0.762	smart_EGF-like,smart_EGF-like_Ca-bd,pirsf_Notch,pfscan_EG-like_dom	pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_3,prints_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	162	0	0.00	10	15	60.00	-	-	-
NR1D1	0	genome.wustl.edu	37	17	38253621	38253621	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	38253621	38253621	A	G	SNP	NR1D1	ENST00000246672	human	ensembl	69_37n	-1	known	missense	c.67	p.S23P	0.999	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	NR1D1	HGNC	ENSG00000126368	54	0	0.00	144	111	43.36	-	-	-
NUMBL	0	genome.wustl.edu	37	19	41173889	41173889	+	Silent	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	41173889	41173889	C	T	SNP	NUMBL	ENST00000252891	human	ensembl	69_37n	-1	known	silent	c.1314	p.Q438	1.000	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTyr_interaction_dom,pfam_PTB,smart_PTyr_interaction_dom,pirsf_Numb/numb-like,pfscan_PTyr_interaction_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	25	0	0.00	8	4	33.33	-	-	-
O3FAR1	0	genome.wustl.edu	37	10	95326590	95326590	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	10	95326590	95326590	T	G	SNP	O3FAR1	ENST00000371483	human	ensembl	69_37n	+1	known	missense	c.113	p.V38G	0.967	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	-	no_errors	O3FAR1	HGNC	ENSG00000186188	214	0	0.00	15	14	48.28	-	-	-
OAF	0	genome.wustl.edu	37	11	120099649	120099649	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	120099649	120099649	T	G	SNP	OAF	ENST00000328965	human	ensembl	69_37n	+1	known	missense	c.620	p.V207G	0.003	NULL	NULL	-	no_errors	OAF	HGNC	ENSG00000184232	68	0	0.00	13	6	31.58	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228402101	228402101	+	Silent	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	228402101	228402101	C	G	SNP	OBSCN	ENST00000422127	human	ensembl	69_37n	+1	known	silent	c.1485	p.G495	0.892	superfamily_Fibronectin_type3,smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	147	0	0.00	40	14	25.93	-	-	-
OR2D2	0	genome.wustl.edu	37	11	6912828	6912828	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	6912828	6912828	C	A	SNP	OR2D2	ENST00000299459	human	ensembl	69_37n	-1	known	missense	c.904	p.V302L	0.592	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt	-	no_errors	OR2D2	HGNC	ENSG00000166368	62	0	0.00	125	67	34.72	-	-	-
PABPC3	0	genome.wustl.edu	37	13	25671062	25671062	+	Silent	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	13	25671062	25671062	A	G	SNP	PABPC3	ENST00000281589	human	ensembl	69_37n	+1	known	silent	c.726	p.E242	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	40	0	0.00	504	105	17.24	-	-	-
PABPC3	0	genome.wustl.edu	37	13	25671089	25671089	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	13	25671089	25671089	G	T	SNP	PABPC3	ENST00000281589	human	ensembl	69_37n	+1	known	missense	c.753	p.M251I	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	46	0	0.00	628	96	13.26	-	-	-
PANK4	0	genome.wustl.edu	37	1	2453125	2453125	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	2453125	2453125	C	G	SNP	PANK4	ENST00000502770	human	ensembl	69_37n	-1	known	missense	c.380	p.G127A	0.000	NULL	NULL	-	no_errors	PANK4	HGNC	ENSG00000157881	92	0	0.00	75	18	19.35	-	-	-
PARVG	0	genome.wustl.edu	37	22	44585003	44585003	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	44585003	44585003	C	G	SNP	PARVG	ENST00000415224	human	ensembl	69_37n	+1	known	missense	c.257	p.A86G	0.189	pfam_CH-domain,superfamily_CH-domain,pfscan_CH-domain	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	PARVG	HGNC	ENSG00000138964	65	0	0.00	22	33	60.00	-	-	-
PCNT	0	genome.wustl.edu	37	21	47817989	47817989	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	21	47817989	47817989	A	G	SNP	PCNT	ENST00000359568	human	ensembl	69_37n	+1	known	missense	c.4508	p.E1503G	1.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	62	0	0.00	90	62	40.26	-	-	-
PDZD7	0	genome.wustl.edu	37	10	102789826	102789826	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	10	102789826	102789826	G	C	SNP	PDZD7	ENST00000370215	human	ensembl	69_37n	-1	known	missense	c.151	p.L51V	0.993	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD7	HGNC	ENSG00000186862	157	0	0.00	36	13	26.53	-	-	-
PFKM	0	genome.wustl.edu	37	12	48526792	48526792	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	48526792	48526792	A	C	SNP	PFKM	ENST00000312352	human	ensembl	69_37n	+1	known	missense	c.379	p.T127P	1.000	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKM	HGNC	ENSG00000152556	60	0	0.00	112	31	21.68	-	-	-
PICK1	0	genome.wustl.edu	37	22	38465067	38465067	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	38465067	38465067	T	G	SNP	PICK1	ENST00000356976	human	ensembl	69_37n	+1	known	missense	c.377	p.V126G	1.000	pfam_Arfaptin_homology_dom	pfam_Arfaptin_homology_dom,pfam_PDZ,pfam_BAR_dom,superfamily_PDZ,smart_PDZ,pfscan_Arfaptin_homology_dom,pfscan_PDZ	-	no_errors	PICK1	HGNC	ENSG00000100151	101	0	0.00	30	25	45.45	-	-	-
PIGZ	0	genome.wustl.edu	37	3	196674232	196674232	+	Silent	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	3	196674232	196674232	A	C	SNP	PIGZ	ENST00000412723	human	ensembl	69_37n	-1	known	silent	c.1536	p.G512	0.000	NULL	pfam_GPI_mannosylTrfase	-	no_errors	PIGZ	HGNC	ENSG00000119227	34	0	0.00	49	35	40.70	-	-	-
PKD1	0	genome.wustl.edu	37	16	2152597	2152597	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	16	2152597	2152597	A	G	SNP	PKD1	ENST00000262304	human	ensembl	69_37n	-1	known	missense	c.8986	p.S2996P	1.000	NULL	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_LipOase_LH2,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_LipOase_LH2,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_LipOase_LH2,pfscan_REJ-like,pfscan_WSC_carb-bd,prints_PKD_1,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	122	0	0.00	50	23	31.51	-	-	-
PLCXD1	0	genome.wustl.edu	37	X	208197	208197	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	208197	208197	A	G	SNP	PLCXD1	ENST00000381657	human	ensembl	69_37n	+1	known	missense	c.425	p.E142G	0.541	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	-	no_errors	PLCXD1	HGNC	ENSG00000182378	102	1	0.97	70	108	60.67	-	-	-
PNMT	0	genome.wustl.edu	37	17	37826537	37826537	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	37826537	37826537	C	A	SNP	PNMT	ENST00000269582	human	ensembl	69_37n	+1	known	nonsense	c.744	p.Y248*	0.069	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	PNMT	HGNC	ENSG00000141744	105	1	0.93	15	7	31.82	-	-	-
POLG	0	genome.wustl.edu	37	15	89873481	89873481	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	15	89873481	89873481	A	C	SNP	POLG	ENST00000268124	human	ensembl	69_37n	-1	known	missense	c.686	p.V229G	1.000	pirsf_DNA-dir_DNA_pol_A_mt_sub,superfamily_RNaseH-like_dom	pirsf_DNA-dir_DNA_pol_A_mt_sub,pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA-dir_DNA_pol_A_mt	-	no_errors	POLG	HGNC	ENSG00000140521	63	0	0.00	12	14	53.85	-	-	-
POU2F1	0	genome.wustl.edu	37	1	167343435	167343435	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	167343435	167343435	G	C	SNP	POU2F1	ENST00000367866	human	ensembl	69_37n	+1	known	missense	c.493	p.A165P	1.000	NULL	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,pfscan_Homeodomain,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F1	HGNC	ENSG00000143190	29	0	0.00	23	24	51.06	-	-	-
PPARGC1B	0	genome.wustl.edu	37	5	149216613	149216613	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	149216613	149216613	A	C	SNP	PPARGC1B	ENST00000434684	human	ensembl	69_37n	+1	putative	missense	c.1654	p.T552P	0.956	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PPARGC1B	HGNC	ENSG00000155846	60	0	0.00	25	21	45.65	-	-	-
PRRC2B	0	genome.wustl.edu	37	9	134353170	134353170	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	134353170	134353170	C	G	SNP	PRRC2B	ENST00000357304	human	ensembl	69_37n	+1	known	missense	c.4446	p.C1482W	0.168	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	51	0	0.00	27	30	52.63	-	-	-
RABAC1	0	genome.wustl.edu	37	19	42463050	42463050	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	42463050	42463050	T	C	SNP	RABAC1	ENST00000222008	human	ensembl	69_37n	-1	known	missense	c.107	p.E36G	1.000	pfam_Prenylated_rab_accept_PRA1	pfam_Prenylated_rab_accept_PRA1	-	no_errors	RABAC1	HGNC	ENSG00000105404	67	0	0.00	6	14	70.00	-	-	-
RPH3A	0	genome.wustl.edu	37	12	113307580	113307580	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	12	113307580	113307580	G	A	SNP	RPH3A	ENST00000389385	human	ensembl	69_37n	+1	known	silent	c.627	p.R209	1.000	NULL	pfam_C2_Ca-dep,pfam_Rabphilin3A_effector_Zn-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,smart_C2_Ca-dep,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_membr_targeting,pfscan_Rab-bd_domain,pfscan_Znf_FYVE-rel	-	no_errors	RPH3A	HGNC	ENSG00000089169	304	1	0.33	227	105	31.63	-	-	-
RPH3A	0	genome.wustl.edu	37	12	113307580	113307580	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	113307580	113307580	G	A	SNP	RPH3A	ENST00000389385	human	ensembl	69_37n	+1	known	silent	c.627	p.R209	1.000	NULL	pfam_C2_Ca-dep,pfam_Rabphilin3A_effector_Zn-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,smart_C2_Ca-dep,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_membr_targeting,pfscan_Rab-bd_domain,pfscan_Znf_FYVE-rel	-	no_errors	RPH3A	HGNC	ENSG00000089169	40	0	0.00	227	105	31.63	-	-	-
RPLP0	0	genome.wustl.edu	37	12	120634697	120634697	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	120634697	120634697	G	C	SNP	RPLP0	ENST00000228306	human	ensembl	69_37n	-1	known	missense	c.833	p.A278G	1.000	pfam_Ribosomal_60S	pfam_Ribosomal_L10/acidic_P0,pfam_Ribosomal_60S	-	no_errors	RPLP0	HGNC	ENSG00000089157	76	0	0.00	8	37	82.22	-	-	-
RPLP0P2	0	genome.wustl.edu	37	11	61404984	61404984	+	RNA	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	61404984	61404984	C	G	SNP	RPLP0P2	ENST00000496593	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.907	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742	73	0	0.00	33	20	37.74	-	-	-
RRBP1	0	genome.wustl.edu	37	20	17640580	17640580	+	Silent	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	20	17640580	17640580	T	G	SNP	RRBP1	ENST00000246043	human	ensembl	69_37n	-1	known	silent	c.573	p.T191	0.000	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844	72	0	0.00	25	74	74.00	-	-	-
RRP1	0	genome.wustl.edu	37	21	45223490	45223490	+	Silent	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	21	45223490	45223490	T	G	SNP	RRP1	ENST00000497547	human	ensembl	69_37n	+1	known	silent	c.1221	p.G407	0.000	NULL	pfam_Nop52	-	no_errors	RRP1	HGNC	ENSG00000160214	60	0	0.00	14	9	39.13	-	-	-
RUNX3	0	genome.wustl.edu	37	1	25228963	25228963	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	25228963	25228963	T	G	SNP	RUNX3	ENST00000338888	human	ensembl	69_37n	-1	known	missense	c.940	p.T314P	0.988	pirsf_TF_Runt-rel_RUNX	pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,prints_AML1_Runt,pfscan_AML1/Runt_N	-	no_errors	RUNX3	HGNC	ENSG00000020633	31	0	0.00	9	14	60.87	-	-	-
RXFP3	0	genome.wustl.edu	37	5	33937028	33937028	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	33937028	33937028	G	A	SNP	RXFP3	ENST00000330120	human	ensembl	69_37n	+1	known	silent	c.183	p.P61	0.875	NULL	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Frt_met_rcpt	-	no_errors	RXFP3	HGNC	ENSG00000182631	37	0	0.00	62	27	30.34	-	-	-
RYR3	0	genome.wustl.edu	37	15	33923486	33923486	+	Silent	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	15	33923486	33923486	G	T	SNP	RYR3	ENST00000389232	human	ensembl	69_37n	+1	known	silent	c.2859	p.L953	0.982	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	373	0	0.00	319	114	26.21	-	-	-
RYR3	0	genome.wustl.edu	37	15	33923486	33923486	+	Silent	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	15	33923486	33923486	G	T	SNP	RYR3	ENST00000389232	human	ensembl	69_37n	+1	known	silent	c.2859	p.L953	0.982	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	35	0	0.00	319	114	26.21	-	-	-
SEC14L1	0	genome.wustl.edu	37	17	75210067	75210067	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	75210067	75210067	T	C	SNP	SEC14L1	ENST00000392476	human	ensembl	69_37n	+1	known	missense	c.2110	p.S704P	1.000	NULL	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1	-	no_errors	SEC14L1	HGNC	ENSG00000129657	142	1	0.70	34	21	38.18	-	-	-
SELL	0	genome.wustl.edu	37	1	169677594	169677594	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	169677594	169677594	C	G	SNP	SELL	ENST00000236147	human	ensembl	69_37n	-1	known	missense	c.475	p.A159P	0.000	pirsf_L-selectin,pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pirsf_L-selectin,pfam_C-type_lectin,pfam_Sushi_SCR_CCP,pfam_EGF-like_dom,superfamily_C-type_lectin_fold,superfamily_Complement_control_module,smart_C-type_lectin,smart_EGF-like,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELL	HGNC	ENSG00000188404	128	0	0.00	100	62	38.27	-	-	-
SEMA3F	0	genome.wustl.edu	37	3	50224126	50224126	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	3	50224126	50224126	C	A	SNP	SEMA3F	ENST00000002829	human	ensembl	69_37n	+1	known	missense	c.1894	p.Q632K	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Ig_sub,smart_Ig_sub2,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA3F	HGNC	ENSG00000001617	74	0	0.00	40	19	32.20	-	-	-
SEMA7A	0	genome.wustl.edu	37	15	74703050	74703050	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	15	74703050	74703050	T	G	SNP	SEMA7A	ENST00000261918	human	ensembl	69_37n	-1	known	missense	c.1916	p.H639P	0.086	NULL	pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA7A	HGNC	ENSG00000138623	116	1	0.84	21	18	43.90	-	-	-
SHISA7	0	genome.wustl.edu	37	19	55953908	55953908	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	55953908	55953908	C	G	SNP	SHISA7	ENST00000376325	human	ensembl	69_37n	-1	known	missense	c.323	p.G108A	1.000	NULL	NULL	-	no_errors	SHISA7	HGNC	ENSG00000187902	58	0	0.00	4	16	80.00	-	-	-
SHKBP1	0	genome.wustl.edu	37	19	41092756	41092756	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	19	41092756	41092756	G	T	SNP	SHKBP1	ENST00000291842	human	ensembl	69_37n	+1	known	missense	c.1242	p.E414D	1.000	superfamily_WD40_repeat_dom	pfam_T1-type_BTB,pfam_WD40_repeat,superfamily_BTB/POZ_fold,superfamily_WD40_repeat_dom,smart_BTB/POZ-like,smart_WD40_repeat,pfscan_BTB/POZ-like	-	no_errors	SHKBP1	HGNC	ENSG00000160410	78	0	0.00	54	27	33.33	-	-	-
SHKBP1	0	genome.wustl.edu	37	19	41092756	41092756	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	41092756	41092756	G	T	SNP	SHKBP1	ENST00000291842	human	ensembl	69_37n	+1	known	missense	c.1242	p.E414D	1.000	superfamily_WD40_repeat_dom	pfam_T1-type_BTB,pfam_WD40_repeat,superfamily_BTB/POZ_fold,superfamily_WD40_repeat_dom,smart_BTB/POZ-like,smart_WD40_repeat,pfscan_BTB/POZ-like	-	no_errors	SHKBP1	HGNC	ENSG00000160410	38	0	0.00	54	27	33.33	-	-	-
SIGLEC5	0	genome.wustl.edu	37	19	52131147	52131147	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	52131147	52131147	T	G	SNP	SIGLEC5	ENST00000222107	human	ensembl	69_37n	-1	known	missense	c.937	p.T313P	0.885	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC5	HGNC	ENSG00000105501	77	0	0.00	66	29	30.21	-	-	-
SIGLEC6	0	genome.wustl.edu	37	19	52023268	52023268	+	RNA	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	52023268	52023268	C	G	SNP	SIGLEC6	ENST00000474054	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.037	-	-	-	no_errors	SIGLEC6	HGNC	ENSG00000105492	106	0	0.00	63	15	19.23	-	-	-
SLC12A3	0	genome.wustl.edu	37	16	56913108	56913108	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	16	56913108	56913108	G	C	SNP	SLC12A3	ENST00000438926	human	ensembl	69_37n	+1	known	missense	c.1304	p.S435T	0.243	pfam_AA-permease_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease_dom,pfam_AA_permease_N,prints_NaCl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A3	HGNC	ENSG00000070915	75	0	0.00	9	14	60.87	-	-	-
SLC35A2	0	genome.wustl.edu	37	X	48762371	48762371	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	X	48762371	48762371	C	A	SNP	SLC35A2	ENST00000452555	human	ensembl	69_37n	-1	known	missense	c.899	p.W300L	1.000	pfam_Nuc_sug_transpt,pfam_UAA,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	pfam_Nuc_sug_transpt,pfam_UAA,pfam_DMT,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A2	HGNC	ENSG00000102100	63	0	0.00	53	32	37.65	-	-	-
SLC35A2	0	genome.wustl.edu	37	X	48762371	48762371	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	48762371	48762371	C	A	SNP	SLC35A2	ENST00000452555	human	ensembl	69_37n	-1	known	missense	c.899	p.W300L	1.000	pfam_Nuc_sug_transpt,pfam_UAA,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	pfam_Nuc_sug_transpt,pfam_UAA,pfam_DMT,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A2	HGNC	ENSG00000102100	49	0	0.00	53	32	37.65	-	-	-
SLC38A10	0	genome.wustl.edu	37	17	79220018	79220018	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	79220018	79220018	C	G	SNP	SLC38A10	ENST00000374759	human	ensembl	69_37n	-1	known	missense	c.2698	p.A900P	0.003	NULL	pfam_AA_transpt_TM	-	no_errors	SLC38A10	HGNC	ENSG00000157637	276	0	0.00	19	15	44.12	-	-	-
SLIT3	0	genome.wustl.edu	37	5	168199899	168199899	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	168199899	168199899	G	C	SNP	SLIT3	ENST00000519560	human	ensembl	69_37n	-1	known	missense	c.1346	p.A449G	1.000	smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C	pfam_EGF-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd,smart_EGF-like,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	161	0	0.00	29	19	38.78	-	-	-
SPAG8	0	genome.wustl.edu	37	9	35809551	35809551	+	RNA	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	35809551	35809551	A	C	SNP	SPAG8	ENST00000489063	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPAG8	HGNC	ENSG00000137098	71	0	0.00	65	65	50.00	-	-	-
SPATA21	0	genome.wustl.edu	37	1	16748588	16748588	+	RNA	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	16748588	16748588	C	T	SNP	SPATA21	ENST00000466212	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPATA21	HGNC	ENSG00000187144	31	0	0.00	55	26	32.10	-	-	-
SPATC1	0	genome.wustl.edu	37	8	145096163	145096163	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	8	145096163	145096163	T	G	SNP	SPATC1	ENST00000377470	human	ensembl	69_37n	+1	known	missense	c.1337	p.V446G	1.000	NULL	NULL	-	no_errors	SPATC1	HGNC	ENSG00000186583	55	0	0.00	32	34	50.75	-	-	-
SPTBN5	0	genome.wustl.edu	37	15	42172431	42172431	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	15	42172431	42172431	T	C	SNP	SPTBN5	ENST00000320955	human	ensembl	69_37n	-1	known	missense	c.2738	p.E913G	0.648	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	48	0	0.00	24	34	58.62	-	-	-
SRC	0	genome.wustl.edu	37	20	36022255	36022255	+	RNA	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	20	36022255	36022255	A	G	SNP	SRC	ENST00000489153	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	SRC	HGNC	ENSG00000197122	99	0	0.00	21	21	48.84	-	-	-
SRCAP	0	genome.wustl.edu	37	16	30731617	30731617	+	Silent	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	16	30731617	30731617	A	C	SNP	SRCAP	ENST00000262518	human	ensembl	69_37n	+1	known	silent	c.2952	p.P984	0.995	NULL	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603	48	0	0.00	69	28	28.57	-	-	-
SREBF2	0	genome.wustl.edu	37	22	42276902	42276902	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	42276902	42276902	G	C	SNP	SREBF2	ENST00000424354	human	ensembl	69_37n	+1	known	missense	c.2044	p.A682P	0.003	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	SREBF2	HGNC	ENSG00000198911	82	0	0.00	1	6	85.71	-	-	-
SUSD3	0	genome.wustl.edu	37	9	95847083	95847083	+	RNA	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	9	95847083	95847083	A	C	SNP	SUSD3	ENST00000471462	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SUSD3	HGNC	ENSG00000157303	39	0	0.00	9	18	64.29	-	-	-
SYP	0	genome.wustl.edu	37	X	49050648	49050648	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	X	49050648	49050648	C	T	SNP	SYP	ENST00000263233	human	ensembl	69_37n	-1	known	missense	c.398	p.R133Q	1.000	pfam_MARVEL-like_dom	pfam_MARVEL-like_dom,prints_Synaptophysin/porin	-	no_errors	SYP	HGNC	ENSG00000102003	379	1	0.26	239	101	29.62	-	-	-
SYP	0	genome.wustl.edu	37	X	49050648	49050648	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	X	49050648	49050648	C	T	SNP	SYP	ENST00000263233	human	ensembl	69_37n	-1	known	missense	c.398	p.R133Q	1.000	pfam_MARVEL-like_dom	pfam_MARVEL-like_dom,prints_Synaptophysin/porin	-	no_errors	SYP	HGNC	ENSG00000102003	68	0	0.00	239	101	29.62	-	-	-
TCIRG1	0	genome.wustl.edu	37	11	67817893	67817893	+	Splice_Site	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	67817893	67817893	T	G	SNP	TCIRG1	ENST00000530802	human	ensembl	69_37n	+1	known	splice_site	c.NULL	NULL	0.001	-	-	-	no_errors	TCIRG1	HGNC	ENSG00000110719	85	0	0.00	36	26	41.94	-	-	-
TECTA	0	genome.wustl.edu	37	11	121000388	121000388	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	11	121000388	121000388	G	A	SNP	TECTA	ENST00000264037	human	ensembl	69_37n	+1	known	silent	c.2409	p.S803	0.975	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_Zona_pellucida_Endoglin/CD105,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	-	no_errors	TECTA	HGNC	ENSG00000109927	408	2	0.49	316	160	33.54	-	-	-
TECTA	0	genome.wustl.edu	37	11	121000388	121000388	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	11	121000388	121000388	G	A	SNP	TECTA	ENST00000264037	human	ensembl	69_37n	+1	known	silent	c.2409	p.S803	0.975	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_Zona_pellucida_Endoglin/CD105,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	-	no_errors	TECTA	HGNC	ENSG00000109927	66	0	0.00	316	160	33.54	-	-	-
TEN1	0	genome.wustl.edu	37	17	73996333	73996333	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	73996333	73996333	G	C	SNP	TEN1	ENST00000397640	human	ensembl	69_37n	+1	known	missense	c.362	p.G121A	0.000	NULL	NULL	-	no_errors	TEN1	HGNC	ENSG00000257949	59	0	0.00	38	24	38.71	-	-	-
TEX264	0	genome.wustl.edu	37	3	51708440	51708440	+	Silent	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	3	51708440	51708440	A	C	SNP	TEX264	ENST00000341333	human	ensembl	69_37n	+1	known	silent	c.120	p.S40	0.969	NULL	superfamily_Reg_factor_effector_bac	-	no_errors	TEX264	HGNC	ENSG00000164081	72	0	0.00	80	33	28.45	-	-	-
THTPA	0	genome.wustl.edu	37	14	24028236	24028236	+	RNA	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	14	24028236	24028236	C	T	SNP	THTPA	ENST00000553985	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-66N24.4	Clone_based_vega_gene	ENSG00000157306	37	0	0.00	4	4	50.00	-	-	-
TMEM161B	0	genome.wustl.edu	37	5	87516503	87516503	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	5	87516503	87516503	A	C	SNP	TMEM161B	ENST00000296595	human	ensembl	69_37n	-1	known	missense	c.323	p.V108G	1.000	pfam_Transmembrane_161A/B	pfam_Transmembrane_161A/B	-	no_errors	TMEM161B	HGNC	ENSG00000164180	33	0	0.00	46	107	69.03	-	-	-
TMPRSS9	0	genome.wustl.edu	37	19	2396400	2396400	+	RNA	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	2396400	2396400	C	T	SNP	TMPRSS9	ENST00000592650	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TMPRSS9	HGNC	ENSG00000178297	11	0	0.00	10	6	37.50	-	-	-
TMTC2	0	genome.wustl.edu	37	12	83251119	83251119	+	Silent	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	83251119	83251119	A	G	SNP	TMTC2	ENST00000321196	human	ensembl	69_37n	+1	known	silent	c.414	p.G138	0.615	NULL	pfam_TPR-1,pfam_TPR_2,pfam_DUF1736,pfam_TPR-4,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC2	HGNC	ENSG00000179104	88	0	0.00	75	37	30.58	-	-	-
TNRC6C	0	genome.wustl.edu	37	17	76071307	76071307	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	17	76071307	76071307	G	C	SNP	TNRC6C	ENST00000335749	human	ensembl	69_37n	+1	known	missense	c.2999	p.R1000P	1.000	NULL	pfam_Argonaute_hook_dom,pfam_UBA/transl_elong_EF1B_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687	38	0	0.00	45	29	38.16	-	-	-
TNS3	0	genome.wustl.edu	37	7	47342642	47342642	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	7	47342642	47342642	G	A	SNP	TNS3	ENST00000311160	human	ensembl	69_37n	-1	known	silent	c.3363	p.F1121	1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Tyr_Pase_cat,smart_SH2,smart_PTyr_interaction_dom,pfscan_SH2,pfscan_Tyr/Dual-specificity_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS3	HGNC	ENSG00000136205	71	0	0.00	39	25	39.06	-	-	-
TOMM22	0	genome.wustl.edu	37	22	39077991	39077991	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	39077991	39077991	C	G	SNP	TOMM22	ENST00000216034	human	ensembl	69_37n	+1	known	missense	c.8	p.A3G	1.000	NULL	pfam_Tom22	-	no_errors	TOMM22	HGNC	ENSG00000100216	39	0	0.00	3	12	80.00	-	-	-
TPP2	0	genome.wustl.edu	37	13	103301465	103301465	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	13	103301465	103301465	A	C	SNP	TPP2	ENST00000376065	human	ensembl	69_37n	+1	known	missense	c.2837	p.N946T	0.998	pfam_Peptidase_S8A_TPPII	pfam_Peptidase_S8/S53,pfam_Peptidase_S8A_TPPII,superfamily_Peptidase_S8/S53,prints_Peptidase_S8_subtilisin-rel	-	no_errors	TPP2	HGNC	ENSG00000134900	66	0	0.00	138	58	29.44	-	-	-
TRPC4AP	0	genome.wustl.edu	37	20	33591353	33591353	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	20	33591353	33591353	G	C	SNP	TRPC4AP	ENST00000252015	human	ensembl	69_37n	-1	known	missense	c.2116	p.P706A	1.000	pfam_DUF3689	pfam_DUF3689	-	no_errors	TRPC4AP	HGNC	ENSG00000100991	176	0	0.00	52	15	22.39	-	-	-
TSPAN11	0	genome.wustl.edu	37	12	31116820	31116820	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	12	31116820	31116820	C	A	SNP	TSPAN11	ENST00000261177	human	ensembl	69_37n	+1	known	nonsense	c.144	p.Y48*	1.000	pfam_Tetraspanin/Peripherin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN11	HGNC	ENSG00000110900	132	0	0.00	33	30	47.62	-	-	-
TTC38	0	genome.wustl.edu	37	22	46669905	46669905	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	22	46669905	46669905	A	C	SNP	TTC38	ENST00000445282	human	ensembl	69_37n	+1	known	missense	c.304	p.T102P	0.000	NULL	NULL	-	no_errors	TTC38	HGNC	ENSG00000075234	42	0	0.00	26	19	42.22	-	-	-
TTN	0	genome.wustl.edu	37	2	179633421	179633421	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	179633421	179633421	T	G	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.9142	p.T3048P	0.805	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	128	0	0.00	227	58	20.28	-	-	-
UACA	0	genome.wustl.edu	37	15	70949398	70949398	+	Silent	SNP	G	G	A			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	15	70949398	70949398	G	A	SNP	UACA	ENST00000322954	human	ensembl	69_37n	-1	known	silent	c.4248	p.C1416	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831	59	0	0.00	52	54	50.94	-	-	-
UBL4B	0	genome.wustl.edu	37	1	110655404	110655404	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	110655404	110655404	A	C	SNP	UBL4B	ENST00000334179	human	ensembl	69_37n	+1	known	missense	c.248	p.H83P	0.000	NULL	pfam_Ubiquitin,pfam_SUMO,smart_Ubiquitin,pfscan_Ubiquitin_supergroup	-	no_errors	UBL4B	HGNC	ENSG00000186150	58	0	0.00	34	26	41.94	-	-	-
UROS	0	genome.wustl.edu	37	10	127477546	127477546	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	10	127477546	127477546	C	G	SNP	UROS	ENST00000368786	human	ensembl	69_37n	-1	known	missense	c.689	p.R230P	0.000	pfam_4pyrrol_synth_uPrphyn_synth,superfamily_4pyrrol_synth_uPrphyn_synth	pfam_4pyrrol_synth_uPrphyn_synth,superfamily_4pyrrol_synth_uPrphyn_synth	-	no_errors	UROS	HGNC	ENSG00000188690	32	0	0.00	12	8	40.00	-	-	-
USE1	0	genome.wustl.edu	37	19	17330035	17330035	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	19	17330035	17330035	T	G	SNP	USE1	ENST00000263897	human	ensembl	69_37n	+1	known	missense	c.436	p.S146A	0.386	pfam_Vesicle_transport_protein_Use1	pfam_Vesicle_transport_protein_Use1	-	no_errors	USE1	HGNC	ENSG00000053501	71	0	0.00	35	54	51.43	-	-	-
USP10	0	genome.wustl.edu	37	16	84779261	84779261	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	16	84779261	84779261	G	T	SNP	USP10	ENST00000570191	human	ensembl	69_37n	+1	known	missense	c.1186	p.V396L	0.989	NULL	pfam_Peptidase_C19,pfam_Ataxin-2_C,pfscan_Peptidase_C19	-	no_errors	USP10	HGNC	ENSG00000103194	43	0	0.00	27	19	41.30	-	-	-
VANGL2	0	genome.wustl.edu	37	1	160393856	160393856	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	160393856	160393856	T	G	SNP	VANGL2	ENST00000368061	human	ensembl	69_37n	+1	known	missense	c.1088	p.V363G	1.000	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738	58	0	0.00	23	41	64.06	-	-	-
WDR4	0	genome.wustl.edu	37	21	44299550	44299550	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	21	44299550	44299550	C	G	SNP	WDR4	ENST00000330317	human	ensembl	69_37n	-1	known	missense	c.56	p.G19A	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR4	HGNC	ENSG00000160193	109	0	0.00	50	22	30.56	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168115717	168115717	+	Silent	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	bf856604-4326-4145-bc3c-137098338f61	2	168115717	168115717	A	G	SNP	XIRP2	ENST00000420519	human	ensembl	69_37n	+1	known	silent	c.2760	p.T920	0.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	XIRP2	HGNC	ENSG00000163092	127	0	0.00	75	49	39.52	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168115717	168115717	+	Silent	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	168115717	168115717	A	G	SNP	XIRP2	ENST00000420519	human	ensembl	69_37n	+1	known	silent	c.2760	p.T920	0.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	XIRP2	HGNC	ENSG00000163092	54	0	0.00	75	49	39.52	-	-	-
ZNF142	0	genome.wustl.edu	37	2	219507438	219507438	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	2	219507438	219507438	G	T	SNP	ZNF142	ENST00000411696	human	ensembl	69_37n	-1	known	nonsense	c.3801	p.Y1267*	0.959	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568	81	0	0.00	32	21	38.89	-	-	-
ZNF425	0	genome.wustl.edu	37	7	148800715	148800715	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	7	148800715	148800715	A	G	SNP	ZNF425	ENST00000378061	human	ensembl	69_37n	-1	known	missense	c.2248	p.S750P	0.011	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF425	HGNC	ENSG00000204947	59	0	0.00	38	23	37.70	-	-	-
ZNF451	0	genome.wustl.edu	37	6	56965972	56965972	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	6	56965972	56965972	C	T	SNP	ZNF451	ENST00000370708	human	ensembl	69_37n	+1	known	missense	c.758	p.P253L	0.993	NULL	pfam_LAP2alpha	-	no_errors	ZNF451	HGNC	ENSG00000112200	26	0	0.00	0	2	100.00	-	-	-
ZNF595	0	genome.wustl.edu	37	4	53277	53277	+	RNA	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	4	53277	53277	G	C	SNP	ZNF595	ENST00000339368	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	ZNF595	HGNC	ENSG00000197701	203	0	0.00	247	150	37.50	-	-	-
ZZZ3	0	genome.wustl.edu	37	1	78099032	78099032	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15I-01A-21D-A135-09	TCGA-E2-A15I-11A-32D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9bec02b4-7cf0-4797-b1ac-253ef78a34af	cc8284b1-f404-4283-b41b-006f9402d472	1	78099032	78099032	G	C	SNP	ZZZ3	ENST00000370801	human	ensembl	69_37n	-1	known	missense	c.8	p.A3G	1.000	NULL	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	ZZZ3	HGNC	ENSG00000036549	48	0	0.00	24	25	51.02	-	-	-
