Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADGB	0	genome.wustl.edu	37	6	147049874	147049874	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	6	147049874	147049874	C	A	SNP	ADGB	ENST00000480328	human	ensembl	69_37n	+1	known	nonsense	c.776	p.S259*	0.999	superfamily_Globin-like	superfamily_Globin-like,pfscan_IQ_motif_EF-hand-BS	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ADGB	HGNC	ENSG00000118492	85	0	0.00	87	19	17.92	-	-	-
ARHGAP35	0	genome.wustl.edu	37	19	47503802	47503802	+	Frame_Shift_Del	DEL	T	T	-			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	19	47503802	47503802	T	-	DEL	ARHGAP35	ENST00000404338	human	ensembl	69_37n	+1	known	frame_shift_del	c.4357	p.S1453fs	0.950	NULL	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007	55	0	0.00	25	7	21.21	-	-	-
ARHGEF10L	0	genome.wustl.edu	37	1	17975064	17975064	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	17975064	17975064	C	G	SNP	ARHGEF10L	ENST00000361221	human	ensembl	69_37n	+1	known	missense	c.2288	p.P763R	0.998	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10L	HGNC	ENSG00000074964	87	0	0.00	40	7	14.89	-	-	-
ATG5	0	genome.wustl.edu	37	6	106649944	106649944	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	6	106649944	106649944	G	A	SNP	ATG5	ENST00000360666	human	ensembl	69_37n	-1	known	missense	c.224	p.S75L	1.000	NULL	NULL	-	no_errors	ATG5	HGNC	ENSG00000057663	83	0	0.00	80	9	10.11	-	-	-
ATP1B1	0	genome.wustl.edu	37	1	169094132	169094132	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	169094132	169094132	G	T	SNP	ATP1B1	ENST00000367815	human	ensembl	69_37n	+1	known	missense	c.237	p.Q79H	0.334	pfam_ATPase_P-typ_cation-exchng_bsu,tigrfam_ATPase_P-typ_cation-exchng_bsu	pfam_ATPase_P-typ_cation-exchng_bsu,tigrfam_ATPase_P-typ_cation-exchng_bsu	-	no_errors	ATP1B1	HGNC	ENSG00000143153	86	0	0.00	70	8	10.26	-	-	-
C20orf111	0	genome.wustl.edu	37	20	42831600	42831600	+	Splice_Site	SNP	C	C	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	20	42831600	42831600	C	A	SNP	C20orf111	ENST00000255174	human	ensembl	69_37n	-1	known	splice_site	c.191+1	e2+1	1.000	-	-	-	no_errors	C20orf111	HGNC	ENSG00000132823	125	0	0.00	104	29	21.80	-	-	-
CALR3	0	genome.wustl.edu	37	19	16606648	16606648	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	19	16606648	16606648	C	T	SNP	CALR3	ENST00000269881	human	ensembl	69_37n	-1	known	missense	c.107	p.R36Q	1.000	pfam_Calret/calnex,superfamily_ConA-like_lec_gl,pirsf_Calreticulin	pfam_Calret/calnex,superfamily_ConA-like_lec_gl,superfamily_Calreticulin/calnexin_P,pirsf_Calreticulin,prints_Calret/calnex	-	no_errors	CALR3	HGNC	ENSG00000141979	77	0	0.00	59	14	18.92	-	-	-
CD1B	0	genome.wustl.edu	37	1	158298045	158298045	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	158298045	158298045	G	A	SNP	CD1B	ENST00000368168	human	ensembl	69_37n	-1	known	missense	c.983	p.S328L	0.062	NULL	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	CD1B	HGNC	ENSG00000158485	196	0	0.00	127	32	20.13	-	-	-
CEP19	0	genome.wustl.edu	37	3	196434456	196434456	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	3	196434456	196434456	C	A	SNP	CEP19	ENST00000409690	human	ensembl	69_37n	-1	known	missense	c.470	p.C157F	1.000	NULL	NULL	-	no_errors	CEP19	HGNC	ENSG00000174007	124	0	0.00	98	17	14.66	-	-	-
COL5A3	0	genome.wustl.edu	37	19	10097049	10097049	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	19	10097049	10097049	G	A	SNP	COL5A3	ENST00000264828	human	ensembl	69_37n	-1	known	missense	c.2294	p.P765L	0.074	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573	30	0	0.00	11	13	54.17	-	-	-
EFCAB7	0	genome.wustl.edu	37	1	63999242	63999242	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	63999242	63999242	G	A	SNP	EFCAB7	ENST00000371088	human	ensembl	69_37n	+1	known	missense	c.604	p.E202K	0.998	NULL	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	EFCAB7	HGNC	ENSG00000203965	63	0	0.00	28	22	44.00	-	-	-
EFCAB7	0	genome.wustl.edu	37	1	64011686	64011686	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	64011686	64011686	G	C	SNP	EFCAB7	ENST00000371088	human	ensembl	69_37n	+1	known	missense	c.904	p.V302L	0.997	NULL	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	EFCAB7	HGNC	ENSG00000203965	77	0	0.00	77	13	14.44	-	-	-
EPB41L5	0	genome.wustl.edu	37	2	120903830	120903830	+	Silent	SNP	T	T	C			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	2	120903830	120903830	T	C	SNP	EPB41L5	ENST00000263713	human	ensembl	69_37n	+1	known	silent	c.1758	p.H586	1.000	NULL	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	EPB41L5	HGNC	ENSG00000115109	71	0	0.00	45	16	26.23	-	-	-
FAM217A	0	genome.wustl.edu	37	6	4069649	4069649	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	6	4069649	4069649	C	T	SNP	FAM217A	ENST00000274673	human	ensembl	69_37n	-1	known	missense	c.808	p.D270N	0.949	NULL	NULL	-	no_errors	FAM217A	HGNC	ENSG00000145975	147	0	0.00	46	39	45.88	-	-	-
FASTKD2	0	genome.wustl.edu	37	2	207638973	207638973	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	2	207638973	207638973	G	A	SNP	FASTKD2	ENST00000236980	human	ensembl	69_37n	+1	known	missense	c.1279	p.E427K	1.000	NULL	pfam_FAST_Leu-rich,pfam_FAST_2,pfam_RAP,smart_RAP	-	no_errors	FASTKD2	HGNC	ENSG00000118246	148	1	0.67	46	92	66.19	-	-	-
FMN2	0	genome.wustl.edu	37	1	240370352	240370352	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	240370352	240370352	C	T	SNP	FMN2	ENST00000319653	human	ensembl	69_37n	+1	known	missense	c.2240	p.S747F	0.999	NULL	pfam_FH2_actin-bd,pfam_Formin_homology_1,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	47	0	0.00	22	17	43.59	-	-	-
FMN2	0	genome.wustl.edu	37	1	240370552	240370552	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	240370552	240370552	C	T	SNP	FMN2	ENST00000319653	human	ensembl	69_37n	+1	known	missense	c.2440	p.P814S	0.626	smart_Actin-bd_FH2/DRF_autoreg	pfam_FH2_actin-bd,pfam_Formin_homology_1,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	55	0	0.00	23	17	42.50	-	-	-
GCNT4	0	genome.wustl.edu	37	5	74325091	74325091	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	5	74325091	74325091	G	A	SNP	GCNT4	ENST00000322348	human	ensembl	69_37n	-1	known	missense	c.772	p.P258S	0.877	pfam_Glyco_trans_14	pfam_Glyco_trans_14	-	no_errors	GCNT4	HGNC	ENSG00000176928	60	0	0.00	45	7	13.46	-	-	-
GOLGA6L6	0	genome.wustl.edu	37	15	20740459	20740461	+	In_Frame_Del	DEL	TCG	TCG	-			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	TCG	TCG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	15	20740459	20740461	TCG	-	DEL	GOLGA6L6	ENST00000427390	human	ensembl	69_37n	-1	known	in_frame_del	c.1291_1289	p.AK430in_frame_delE	0.966:0.963:0.960	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L6	HGNC	ENSG00000215405	17	0	0.00	8	8	50.00	-	-	-
GPATCH4	0	genome.wustl.edu	37	1	156568029	156568030	+	In_Frame_Ins	INS	-	-	CCA			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	156568029	156568030	-	CCA	INS	GPATCH4	ENST00000438976	human	ensembl	69_37n	-1	known	in_frame_ins	c.251_250	p.84in_frame_insV	0.994:0.999	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH4	HGNC	ENSG00000160818	183	0	0.00	118	24	16.90	-	-	-
HPSE2	0	genome.wustl.edu	37	10	100219345	100219346	+	Frame_Shift_Ins	INS	-	-	G			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	10	100219345	100219346	-	G	INS	HPSE2	ENST00000370552	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1765_1764	p.C588fs	1.000:1.000	NULL	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987	30	0	0.00	9	2	18.18	-	-	-
INTS4L1	0	genome.wustl.edu	37	7	64649422	64649422	+	RNA	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	7	64649422	64649422	C	T	SNP	INTS4L1	ENST00000587624	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	INTS4L1	HGNC	ENSG00000164669	43	0	0.00	28	9	24.32	-	-	-
LIG4	0	genome.wustl.edu	37	13	108862458	108862458	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	13	108862458	108862458	C	T	SNP	LIG4	ENST00000356922	human	ensembl	69_37n	-1	known	missense	c.1159	p.E387K	1.000	pfam_DNA_ligase_ATP-dep_cent,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_IV,pfam_BRCT_dom,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold-like,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG4	HGNC	ENSG00000174405	85	0	0.00	84	17	16.83	-	-	-
MASP1	0	genome.wustl.edu	37	3	186970996	186970996	+	Silent	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	3	186970996	186970996	C	T	SNP	MASP1	ENST00000296280	human	ensembl	69_37n	-1	known	silent	c.852	p.S284	0.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_Peptidase_S1_S6,pfam_CUB,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_EGF-like_Ca-bd,smart_Sushi_SCR_CCP,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_CUB,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1_S6	-	no_errors	MASP1	HGNC	ENSG00000127241	82	0	0.00	77	16	17.20	-	-	-
MED25	0	genome.wustl.edu	37	19	50335258	50335258	+	Silent	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	19	50335258	50335258	C	T	SNP	MED25	ENST00000312865	human	ensembl	69_37n	+1	known	silent	c.1296	p.Y432	0.703	pfam_Mediator_Med25	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973	110	0	0.00	68	8	10.53	-	-	-
NCOA6	0	genome.wustl.edu	37	20	33370003	33370003	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	20	33370003	33370003	G	C	SNP	NCOA6	ENST00000359003	human	ensembl	69_37n	-1	known	missense	c.156	p.F52L	1.000	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646	69	0	0.00	65	34	34.34	-	-	-
NCOR1	0	genome.wustl.edu	37	17	16029456	16029457	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	17	16029456	16029457	-	T	INS	NCOR1	ENST00000268712	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1574_1573	p.T525fs	1.000:1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027	103	0	0.00	44	28	38.89	-	-	-
NUMB	0	genome.wustl.edu	37	14	73753872	73753872	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	14	73753872	73753872	T	A	SNP	NUMB	ENST00000355058	human	ensembl	69_37n	-1	known	missense	c.601	p.T201S	1.000	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTyr_interaction_dom,pfam_PTB,smart_PTyr_interaction_dom,pirsf_Numb/numb-like,pfscan_PTyr_interaction_dom	-	no_errors	NUMB	HGNC	ENSG00000133961	200	0	0.00	105	59	35.98	-	-	-
NUP133	0	genome.wustl.edu	37	1	229622242	229622242	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	1	229622242	229622242	C	G	SNP	NUP133	ENST00000261396	human	ensembl	69_37n	-1	known	missense	c.1376	p.G459A	0.948	NULL	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N	-	no_errors	NUP133	HGNC	ENSG00000069248	99	0	0.00	29	28	49.12	-	-	-
PLA2G7	0	genome.wustl.edu	37	6	46672386	46672386	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	6	46672386	46672386	C	T	SNP	PLA2G7	ENST00000274793	human	ensembl	69_37n	-1	known	missense	c.1237	p.D413N	0.670	pfam_PAF_acetylhydro,pirsf_Ac_Ohase_PAF	pfam_PAF_acetylhydro,pirsf_Ac_Ohase_PAF	-	no_errors	PLA2G7	HGNC	ENSG00000146070	130	0	0.00	106	33	23.74	-	-	-
PLA2G7	0	genome.wustl.edu	37	6	46678354	46678354	+	Silent	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	6	46678354	46678354	C	T	SNP	PLA2G7	ENST00000274793	human	ensembl	69_37n	-1	known	silent	c.705	p.L235	0.135	pfam_PAF_acetylhydro,pirsf_Ac_Ohase_PAF	pfam_PAF_acetylhydro,pirsf_Ac_Ohase_PAF	-	no_errors	PLA2G7	HGNC	ENSG00000146070	98	0	0.00	53	30	36.14	-	-	-
RAB19	0	genome.wustl.edu	37	7	140107556	140107556	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	7	140107556	140107556	T	G	SNP	RAB19	ENST00000275874	human	ensembl	69_37n	+1	known	missense	c.110	p.F37C	1.000	pfam_Small_GTPase,pfam_MIRO-like,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB19	HGNC	ENSG00000146955	110	0	0.00	84	18	17.65	-	-	-
RANBP2	0	genome.wustl.edu	37	2	109347330	109347330	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	2	109347330	109347330	G	A	SNP	RANBP2	ENST00000283195	human	ensembl	69_37n	+1	known	missense	c.241	p.E81K	1.000	pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR-1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201	178	0	0.00	126	52	29.21	-	-	-
RECQL	0	genome.wustl.edu	37	12	21630747	21630747	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	12	21630747	21630747	A	T	SNP	RECQL	ENST00000421138	human	ensembl	69_37n	-1	known	missense	c.857	p.L286Q	1.000	smart_Helicase_ATP-bd,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_RQC_domain,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL	HGNC	ENSG00000004700	66	0	0.00	34	37	52.11	-	-	-
SALL1	0	genome.wustl.edu	37	16	51174727	51174727	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	16	51174727	51174727	C	T	SNP	SALL1	ENST00000251020	human	ensembl	69_37n	-1	known	missense	c.1406	p.R469H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	61	0	0.00	23	8	25.81	-	-	-
SLCO2A1	0	genome.wustl.edu	37	3	133664056	133664056	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	3	133664056	133664056	G	A	SNP	SLCO2A1	ENST00000481359	human	ensembl	69_37n	-1	known	missense	c.1154	p.A385V	1.000	NULL	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO2A1	HGNC	ENSG00000174640	75	0	0.00	36	21	36.21	-	-	-
SPRED2	0	genome.wustl.edu	37	2	65571979	65571979	+	Silent	SNP	G	G	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	2	65571979	65571979	G	T	SNP	SPRED2	ENST00000356388	human	ensembl	69_37n	-1	known	silent	c.78	p.S26	1.000	pfam_EVH1,smart_EVH1,pfscan_EVH1	pfam_Sprouty,pfam_EVH1,smart_EVH1,pfscan_EVH1	-	no_errors	SPRED2	HGNC	ENSG00000198369	47	0	0.00	41	6	12.77	-	-	-
STK35	0	genome.wustl.edu	37	20	2097463	2097463	+	Silent	SNP	T	T	C			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	20	2097463	2097463	T	C	SNP	STK35	ENST00000381482	human	ensembl	69_37n	+1	known	silent	c.1044	p.I348	0.998	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	STK35	HGNC	ENSG00000125834	100	0	0.00	44	29	39.73	-	-	-
TMEM143	0	genome.wustl.edu	37	19	48836505	48836505	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	19	48836505	48836505	G	T	SNP	TMEM143	ENST00000293261	human	ensembl	69_37n	-1	known	missense	c.1351	p.Q451K	0.193	NULL	pfam_DUF3754	-	no_errors	TMEM143	HGNC	ENSG00000161558	43	0	0.00	14	5	26.32	-	-	-
TMPRSS9	0	genome.wustl.edu	37	19	2416579	2416579	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	19	2416579	2416579	C	T	SNP	TMPRSS9	ENST00000332578	human	ensembl	69_37n	+1	known	missense	c.1687	p.L563F	0.452	pirsf_Pept_S1A_polyserase-1,pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pirsf_Pept_S1A_polyserase-1,pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Pept_cys/ser_Trypsin-like,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1_S6	-	no_errors	TMPRSS9	HGNC	ENSG00000178297	28	0	0.00	18	11	37.93	-	-	-
TP53	0	genome.wustl.edu	37	17	7579349	7579349	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	17	7579349	7579349	A	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.338	p.F113C	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	38	0	0.00	13	8	38.10	-	-	-
TSPAN3	0	genome.wustl.edu	37	15	77346562	77346562	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	15	77346562	77346562	G	T	SNP	TSPAN3	ENST00000267970	human	ensembl	69_37n	-1	known	missense	c.390	p.N130K	1.000	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN3	HGNC	ENSG00000140391	147	0	0.00	49	48	48.98	-	-	-
VCAN	0	genome.wustl.edu	37	5	82834037	82834037	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	5	82834037	82834037	G	T	SNP	VCAN	ENST00000265077	human	ensembl	69_37n	+1	known	nonsense	c.5215	p.E1739*	0.001	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EGF-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Complement_control_module,smart_Ig_sub,smart_Link,smart_EGF-like,smart_EGF-like_Ca-bd,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427	49	0	0.00	21	11	34.38	-	-	-
VPS13C	0	genome.wustl.edu	37	15	62277090	62277090	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	15	62277090	62277090	G	C	SNP	VPS13C	ENST00000261517	human	ensembl	69_37n	-1	known	missense	c.1687	p.Q563E	0.354	NULL	pfam_VPSAP,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	109	0	0.00	83	15	15.31	-	-	-
WDR17	0	genome.wustl.edu	37	4	177050008	177050008	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A1NF-01A-11D-A14G-09	TCGA-E9-A1NF-10A-01D-A14G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cd428bec-fc31-4d2d-9e6c-c8f30608d797	edffc09c-201a-44d1-b758-5d9d64f5f6a6	4	177050008	177050008	A	G	SNP	WDR17	ENST00000280190	human	ensembl	69_37n	+1	known	missense	c.982	p.K328E	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627	50	0	0.00	44	7	13.73	-	-	-
