Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	
ALG6	29929	hgsc.bcm.edu;ucsc.edu	37	1	63902501	63902506	+	In_Frame_Del	DEL	TCTCAG	TCTCAG	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	TCTCAG	TCTCAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
ANKMY1	51281	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	241465702	241465702	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
ARID1A	8289	broad.mit.edu;hgsc.bcm.edu	37	1	27097703	27097703	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
ARID1B	57492	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	157522543	157522543	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
B3GNT5	84002	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	182987783	182987783	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
BACE2	25825	hgsc.bcm.edu	37	21	42598262	42598262	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
BACH2	60468	hgsc.bcm.edu	37	6	90660846	90660856	+	Frame_Shift_Del	DEL	CGGCCCCAGCT	CGGCCCCAGCT	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	CGGCCCCAGCT	CGGCCCCAGCT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
C3orf32	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	8673776	8673776	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
CADM1	23705	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	115102194	115102194	+	Silent	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
CARS2	79587	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	13	111335435	111335435	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
CDSN	1041	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	31084879	31084879	+	Silent	SNP	C	C	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
CES2	8824	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	66976070	66976070	+	Silent	SNP	C	C	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
COL12A1	1303	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	75827250	75827250	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
COL15A1	1306	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	101765861	101765861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
CTAGE1	64693	hgsc.bcm.edu;ucsc.edu	37	18	19996490	19996491	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
DCAKD	79877	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	43112204	43112204	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
DLGAP3	58512	hgsc.bcm.edu;ucsc.edu	37	1	35365794	35365799	+	In_Frame_Del	DEL	GCTGCC	GCTGCC	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	GCTGCC	GCTGCC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
DNAH5	1767	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	13865955	13865955	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
DYNC1H1	1778	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	102516411	102516411	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
DYSF	8291	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	71909676	71909676	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
EHHADH	1962	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	184922240	184922240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
ERBB4	2066	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	212530141	212530141	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
FAM120B	84498	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	170627090	170627090	+	Silent	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
FAM194A	131831	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	150398270	150398270	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
FBXO9	26268	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	52943655	52943655	+	Silent	SNP	T	T	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
FGFBP3	143282	broad.mit.edu;hgsc.bcm.edu	37	10	93668183	93668183	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
FGFR4	2264	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	176524604	176524604	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
FRMPD1	22844	broad.mit.edu;ucsc.edu	37	9	37708465	37708465	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
GIMAP8	155038	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	150171609	150171609	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
GJD2	57369	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	35045023	35045023	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
GNB1	2782	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	1721888	1721888	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
HEPHL1	341208	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	93779079	93779079	+	Silent	SNP	A	A	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
HLF	3131	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	53398085	53398085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
IDS	3423	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	148586585	148586585	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
IKZF1	10320	broad.mit.edu;hgsc.bcm.edu	37	7	50467916	50467916	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
INCENP	3619	broad.mit.edu;ucsc.edu	37	11	61908398	61908398	+	Missense_Mutation	SNP	T	C	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
KALRN	8997	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	124211627	124211627	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
KIAA0415	0	broad.mit.edu;ucsc.edu	37	7	4830219	4830219	+	Silent	SNP	C	T	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
KIAA1161	57462	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	34371724	34371724	+	Silent	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
KLF17	128209	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	44596402	44596402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
KRT1	3848	hgsc.bcm.edu	37	12	53069223	53069243	+	In_Frame_Del	DEL	ACCTCCGGAGCCGTAGCTGCT	ACCTCCGGAGCCGTAGCTGCT	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	ACCTCCGGAGCCGTAGCTGCT	ACCTCCGGAGCCGTAGCTGCT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
LIPE	3991	broad.mit.edu;hgsc.bcm.edu	37	19	42912198	42912198	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
LRP6	4040	broad.mit.edu;hgsc.bcm.edu	37	12	12278312	12278312	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
MCTP2	55784	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	95001402	95001402	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
MEGF8	1954	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	42848626	42848626	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
MGEA5	10724	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	103565869	103565869	+	Silent	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
MLC1	23209	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	22	50518782	50518782	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
MLPH	79083	hgsc.bcm.edu	37	2	238455269	238455270	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
NAV3	89795	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	78362323	78362323	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
NHS	4810	broad.mit.edu;hgsc.bcm.edu	37	X	17742451	17742451	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
NID2	22795	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	52472479	52472479	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
NOC3L	64318	hgsc.bcm.edu;ucsc.edu	37	10	96112093	96112093	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
NUDT19	390916	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	33183154	33183154	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
OR2AG1	144125	broad.mit.edu;hgsc.bcm.edu	37	11	6806985	6806985	+	Silent	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
OR51E1	143503	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	4674702	4674702	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PCDHGA3	56112	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	140724196	140724196	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PCDP1	200373	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	120388454	120388454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PFKP	5214	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	3151561	3151561	+	Silent	SNP	A	A	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PGLYRP4	57115	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	153303264	153303264	+	Silent	SNP	G	G	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PHKA2	5256	hgsc.bcm.edu;ucsc.edu	37	X	18961909	18961920	+	In_Frame_Del	DEL	AATTGCCTCAAG	AATTGCCTCAAG	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	AATTGCCTCAAG	AATTGCCTCAAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PLXND1	23129	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	129324804	129324804	+	Silent	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PMS2	5395	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	6029494	6029494	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
POLE	5426	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	133226298	133226298	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
POLR3B	55703	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	106772092	106772092	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PRR12	57479	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	50098148	50098148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PRRC2C	23215	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	171509126	171509126	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PTPN22	26191	broad.mit.edu;hgsc.bcm.edu	37	1	114394727	114394727	+	Splice_Site	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
PZP	5858	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	9305466	9305466	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
RAET1G	353091	hgsc.bcm.edu	37	6	150240945	150240945	+	Silent	SNP	G	G	A	rs189388116	by1000genomes	TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
RALBP1	10928	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	9516929	9516929	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
RGS3	5998	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	116356377	116356377	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
RNASEH2A	10535	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	12921170	12921170	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SAP130	79595	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	128757928	128757928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SAP130	79595	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	128757929	128757929	+	Silent	SNP	A	A	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SARDH	1757	broad.mit.edu;ucsc.edu	37	9	136578237	136578237	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SLC17A6	57084	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	22364829	22364829	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SNX11	29916	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	46198653	46198653	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SORBS3	10174	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	22414254	22414254	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SOS1	6654	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	39281850	39281850	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SPINT1	6692	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	41136788	41136788	+	Silent	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SRBD1	55133	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	45832575	45832575	+	Silent	SNP	T	T	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
ST8SIA1	6489	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	22354654	22354654	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
STAG3	10734	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	99801730	99801730	+	Silent	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
STAG3	10734	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	99801731	99801731	+	Silent	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SYNJ2	8871	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	158464376	158464376	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TAGAP	117289	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	159457430	159457430	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TGM5	9333	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	43552757	43552757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TMC6	11322	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	76116777	76116777	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TMEM184C	55751	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	4	148555434	148555434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TMEM61	199964	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	55457606	55457606	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TMIGD2	126259	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	4298004	4298004	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TNFRSF1A	7132	hgsc.bcm.edu	37	12	6442919	6442919	+	Silent	SNP	G	G	A	rs104895249	alternate_allele	TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TOP1MT	116447	hgsc.bcm.edu	37	8	144403383	144403383	+	Silent	SNP	C	C	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TOP3A	7156	broad.mit.edu;ucsc.edu	37	17	18188466	18188466	+	Nonsense_Mutation	SNP	T	A	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
TTN	7273	broad.mit.edu;hgsc.bcm.edu	37	2	179460510	179460510	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
UMODL1	89766	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	21	43529671	43529671	+	Splice_Site	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
VSIG4	11326	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	65253460	65253460	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
WDR5	11091	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	137007540	137007540	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
WSCD1	23302	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	6023803	6023803	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
ZBTB10	65986	broad.mit.edu;hgsc.bcm.edu	37	8	81412314	81412314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
ZNF474	133923	hgsc.bcm.edu	37	5	121488450	121488461	+	In_Frame_Del	DEL	TGTGGAGCTCCA	TGTGGAGCTCCA	-	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	TGTGGAGCTCCA	TGTGGAGCTCCA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
FAT4	79633	broad.mit.edu	37	4	126238838	126238838	+	Missense_Mutation	SNP	C	A	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
KCNA7	3743	broad.mit.edu	37	19	49575301	49575301	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
MRPL38	64978	broad.mit.edu	37	17	73898001	73898001	+	Missense_Mutation	SNP	G	C	C	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
OR9G9	504191	broad.mit.edu	37	11	56468430	56468430	+	Silent	SNP	C	T	T	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
SDHAP1	255812	broad.mit.edu	37	3	195692311	195692311	+	Missense_Mutation	SNP	T	C	C	rs62282793	byfrequency;by1000genomes	TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
Unknown	0	broad.mit.edu	37	10	134650414	134650414	+	Missense_Mutation	SNP	C	A	A	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
Unknown	0	broad.mit.edu	37	5	180699086	180699087	+	RNA	INS	-	A	A	rs11381664		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
VHL	7428	broad.mit.edu	37	3	10183725	10183725	+	Nonsense_Mutation	SNP	C	A	A	rs5030826		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	WXS	Illumina Miseq			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
VPS41	27072	broad.mit.edu	37	7	38807138	38807138	+	Missense_Mutation	SNP	G	A	A	rs139485137	bycluster;byfrequency;by1000genomes	TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
WDR18	57418	broad.mit.edu	37	19	994079	994079	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-AK-3444-01A-01D-0966-08	TCGA-AK-3444-10A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ea794170-156d-4251-b899-abfd60b213b0	333c5bbe-e69c-408e-ac80-91b0d8ad44c1	
