Broad GDAC Standard Data Status
stddata__2015_02_02 Run for Tumor Type: KIPAN
Cohort
BCR
Clinical
CN
LowP
Methylation
mRNA
mRNASeq
miR
miRSeq
RPPA
MAF
rawMAF
KIPAN
973
897
883
0
892
88
0
0
873
661
644
0
Note that the links below require Broad internal Firehose login credentials.
Pipeline Dataset
Not Available
Available
InProcess
Successful
Unsuccessful
1
Clinical_Pick_Tier1
0
0
0
1
0
2
CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
3
CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
4
CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
5
CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
6
CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
7
CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
8
CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
9
CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
10
CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
11
CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
12
Merge_Clinical
0
0
0
1
0
13
Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
14
Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
15
Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
16
Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
17
Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
18
Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
19
Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
20
Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
21
Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
22
Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
23
Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
24
Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
25
Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
26
Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
27
Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
28
Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
29
Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
0
1
30
Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
31
Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
32
Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
33
Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
34
Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
35
Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
36
Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
37
Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
38
Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
39
Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
0
0
0
1
0
40
Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
0
0
0
1
0
41
Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
0
0
0
1
0
42
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
43
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
44
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
45
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
46
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
47
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
48
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
49
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
50
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
51
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
52
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
53
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
54
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
55
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
56
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
57
Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
58
Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
59
Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
60
Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
61
Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
62
Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
63
Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
64
Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
65
Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
66
Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
67
Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
0
0
0
1
0
68
Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
0
0
0
1
0
69
Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
70
Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
71
Methylation_Preprocess
0
0
0
1
0
72
miRseq_Mature_Preprocess
0
0
0
1
0
73
miRseq_Preprocess
0
0
0
1
0
74
mRNA_Preprocess_Median
0
0
0
1
0
75
mRNAseq_Preprocess
0
0
0
1
0
76
Mutation_Packager_Calls
0
0
0
1
0
77
Mutation_Packager_Coverage
0
0
0
1
0
78
RPPA_AnnotateWithGene
1
0
0
0
0
79
TP-Clinical_Pick_Tier1
0
0
0
1
0
80
TP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
81
TP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
82
TP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
83
TP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
84
TP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
85
TP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
86
TP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
87
TP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
88
TP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
89
TP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
90
TP-Merge_Clinical
0
0
0
1
0
91
TP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
92
TP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
93
TP-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
94
TP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
95
TP-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
96
TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
97
TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
98
TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
99
TP-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
100
TP-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
101
TP-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
102
TP-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
103
TP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
104
TP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
105
TP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
106
TP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
107
TP-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
0
1
108
TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
109
TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
110
TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
111
TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
112
TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
113
TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
114
TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
115
TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
116
TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
117
TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
0
0
0
1
0
118
TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
0
0
0
1
0
119
TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
0
0
0
1
0
120
TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
121
TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
122
TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
123
TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
124
TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
125
TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
126
TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
127
TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
128
TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
129
TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
130
TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
131
TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
132
TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
133
TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
134
TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
135
TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
136
TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
137
TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
138
TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
139
TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
140
TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
141
TP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
142
TP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
143
TP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
144
TP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
145
TP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
0
0
0
1
0
146
TP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
0
0
0
1
0
147
TP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
148
TP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
149
TP-Methylation_Preprocess
0
0
0
1
0
150
TP-miRseq_Mature_Preprocess
0
0
0
1
0
151
TP-miRseq_Preprocess
0
0
0
1
0
152
TP-mRNA_Preprocess_Median
0
0
0
1
0
153
TP-mRNAseq_Preprocess
0
0
0
1
0
154
TP-Mutation_Packager_Calls
0
0
0
1
0
155
TP-Mutation_Packager_Coverage
0
0
0
1
0
156
TP-RPPA_AnnotateWithGene
1
0
0
0
0
157
TAP-Clinical_Pick_Tier1
0
0
0
0
1
158
TAP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
159
TAP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
160
TAP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
161
TAP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
162
TAP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
163
TAP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
164
TAP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
165
TAP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
166
TAP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
167
TAP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
168
TAP-Merge_Clinical
0
0
0
1
0
169
TAP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
170
TAP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
171
TAP-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
172
TAP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
173
TAP-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
174
TAP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
175
TAP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
176
TAP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
177
TAP-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
178
TAP-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
179
TAP-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
180
TAP-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
181
TAP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
182
TAP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
183
TAP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
184
TAP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
185
TAP-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
1
0
186
TAP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
187
TAP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
188
TAP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
189
TAP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
190
TAP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
191
TAP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
192
TAP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
193
TAP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
194
TAP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
195
TAP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
196
TAP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
197
TAP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
198
TAP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
199
TAP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
200
TAP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
201
TAP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
202
TAP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
203
TAP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
204
TAP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
205
TAP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
206
TAP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
207
TAP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
208
TAP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
209
TAP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
210
TAP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
211
TAP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
212
TAP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
213
TAP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
214
TAP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
215
TAP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
216
TAP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
217
TAP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
218
TAP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
219
TAP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
220
TAP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
221
TAP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
222
TAP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
223
TAP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
224
TAP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
225
TAP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
226
TAP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
227
TAP-Methylation_Preprocess
0
0
0
1
0
228
TAP-miRseq_Mature_Preprocess
0
0
0
1
0
229
TAP-miRseq_Preprocess
0
0
0
1
0
230
TAP-mRNA_Preprocess_Median
1
0
0
0
0
231
TAP-mRNAseq_Preprocess
0
0
0
1
0
232
TAP-Mutation_Packager_Calls
1
0
0
0
0
233
TAP-Mutation_Packager_Coverage
1
0
0
0
0
234
TAP-RPPA_AnnotateWithGene
0
0
0
1
0
235
NT-Clinical_Pick_Tier1
0
0
0
1
0
236
NT-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
237
NT-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
238
NT-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
239
NT-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
0
0
0
1
0
240
NT-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
241
NT-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
0
0
0
1
0
242
NT-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
243
NT-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
244
NT-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
245
NT-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
246
NT-Merge_Clinical
0
0
0
1
0
247
NT-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
248
NT-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
249
NT-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
250
NT-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
251
NT-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
252
NT-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
253
NT-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
254
NT-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
255
NT-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
256
NT-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
257
NT-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
258
NT-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
259
NT-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
260
NT-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
261
NT-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
262
NT-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
263
NT-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
1
0
0
0
0
264
NT-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
265
NT-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
266
NT-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
267
NT-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
268
NT-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
269
NT-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
270
NT-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
271
NT-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
272
NT-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
273
NT-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
0
0
0
1
0
274
NT-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
0
0
0
1
0
275
NT-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
0
0
0
1
0
276
NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
277
NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
278
NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
279
NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
280
NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
281
NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
282
NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
283
NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
284
NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
285
NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
286
NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
287
NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
288
NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
289
NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
290
NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
291
NT-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
292
NT-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
293
NT-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
294
NT-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
295
NT-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
296
NT-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
297
NT-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
298
NT-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
299
NT-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
300
NT-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
301
NT-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
302
NT-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
303
NT-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
304
NT-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
305
NT-Methylation_Preprocess
0
0
0
1
0
306
NT-miRseq_Mature_Preprocess
0
0
0
1
0
307
NT-miRseq_Preprocess
0
0
0
1
0
308
NT-mRNA_Preprocess_Median
1
0
0
0
0
309
NT-mRNAseq_Preprocess
0
0
0
1
0
310
NT-Mutation_Packager_Calls
1
0
0
0
0
311
NT-Mutation_Packager_Coverage
1
0
0
0
0
312
NT-RPPA_AnnotateWithGene
1
0
0
0
0
313
NB-Clinical_Pick_Tier1
0
0
0
1
0
314
NB-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
315
NB-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
316
NB-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
317
NB-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
318
NB-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
319
NB-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
320
NB-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
321
NB-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
322
NB-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
323
NB-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
324
NB-Merge_Clinical
0
0
0
1
0
325
NB-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
326
NB-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
327
NB-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
328
NB-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
329
NB-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
330
NB-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
331
NB-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
332
NB-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
333
NB-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
334
NB-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
335
NB-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
336
NB-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
337
NB-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
338
NB-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
339
NB-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
340
NB-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
341
NB-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
1
0
0
0
0
342
NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
343
NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
344
NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
345
NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
346
NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
347
NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
348
NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
349
NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
350
NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
351
NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
352
NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
353
NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
354
NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
355
NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
356
NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
357
NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
358
NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
359
NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
360
NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
361
NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
362
NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
363
NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
364
NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
365
NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
366
NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
367
NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
368
NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
369
NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
370
NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
371
NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
372
NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
373
NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
374
NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
375
NB-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
376
NB-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
377
NB-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
378
NB-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
379
NB-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
380
NB-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
381
NB-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
382
NB-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
383
NB-Methylation_Preprocess
1
0
0
0
0
384
NB-miRseq_Mature_Preprocess
1
0
0
0
0
385
NB-miRseq_Preprocess
1
0
0
0
0
386
NB-mRNA_Preprocess_Median
1
0
0
0
0
387
NB-mRNAseq_Preprocess
1
0
0
0
0
388
NB-Mutation_Packager_Calls
1
0
0
0
0
389
NB-Mutation_Packager_Coverage
1
0
0
0
0
390
NB-RPPA_AnnotateWithGene
1
0
0
0
0
391
FFPE-Clinical_Pick_Tier1
1
0
0
0
0
392
FFPE-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
393
FFPE-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
394
FFPE-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
395
FFPE-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
396
FFPE-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
397
FFPE-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
398
FFPE-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
399
FFPE-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
400
FFPE-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
401
FFPE-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
402
FFPE-Merge_Clinical
1
0
0
0
0
403
FFPE-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
404
FFPE-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
405
FFPE-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
406
FFPE-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
407
FFPE-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
408
FFPE-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
409
FFPE-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
410
FFPE-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
411
FFPE-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
412
FFPE-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
413
FFPE-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
414
FFPE-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
415
FFPE-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
416
FFPE-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
417
FFPE-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
418
FFPE-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
419
FFPE-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
1
0
0
0
0
420
FFPE-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
421
FFPE-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
422
FFPE-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
423
FFPE-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
424
FFPE-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
425
FFPE-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
426
FFPE-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
427
FFPE-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
428
FFPE-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
429
FFPE-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
430
FFPE-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
431
FFPE-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
432
FFPE-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
433
FFPE-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
434
FFPE-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
435
FFPE-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
436
FFPE-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
437
FFPE-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
438
FFPE-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
439
FFPE-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
440
FFPE-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
441
FFPE-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
442
FFPE-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
443
FFPE-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
444
FFPE-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
445
FFPE-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
446
FFPE-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
447
FFPE-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
448
FFPE-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
449
FFPE-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
450
FFPE-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
451
FFPE-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
452
FFPE-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
453
FFPE-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
454
FFPE-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
455
FFPE-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
456
FFPE-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
457
FFPE-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
458
FFPE-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
459
FFPE-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
460
FFPE-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
461
FFPE-Methylation_Preprocess
0
0
0
1
0
462
FFPE-miRseq_Mature_Preprocess
0
0
0
1
0
463
FFPE-miRseq_Preprocess
0
0
0
1
0
464
FFPE-mRNA_Preprocess_Median
1
0
0
0
0
465
FFPE-mRNAseq_Preprocess
1
0
0
0
0
466
FFPE-Mutation_Packager_Calls
1
0
0
0
0
467
FFPE-Mutation_Packager_Coverage
1
0
0
0
0
468
FFPE-RPPA_AnnotateWithGene
1
0
0
0
0
Total
342
0
0
123
3
This table generated on Mon Apr 6 10:42:01 2015