Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
KRCC1	51315	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	88328025	88328027	+	In_Frame_Del	DEL	TAA	TAA	-	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	TAA	TAA	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_016618	exon4	c.57_59del	p.19_20del	GTACTTTAATATA	.	43	10	32	0	.	.
IFRD1	3475	hgsc.bcm.edu	37	7	112102177	112102178	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	-	-	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001007245	exon8	c.740_741insA	p.A247fs	TTCTTGCATGGAC	.	85	18	102	0	.	.
CHMP1A	5119	hgsc.bcm.edu	37	16	89712424	89712425	+	Frame_Shift_Ins	INS	-	-	CCTT	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	-	-	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001083314	exon6	c.621_622insAAGG	p.G207fs	ACAGGAGCCTTCC	.	89	12	99	0	.	.
SNX9	51429	hgsc.bcm.edu	37	6	158288657	158288716	+	Frame_Shift_Del	DEL	ACAAATCCGGTAAGAGAACTGTACATTCGAGTCTGATTGTCCCATGTGGACTTATTTTTA	ACAAATCCGGTAAGAGAACTGTACATTCGAGTCTGATTGTCCCATGTGGACTTATTTTTA	-	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	ACAAATCCGGTAAGAGAACTGTACATTCGAGTCTGATTGTCCCATGTGGACTTATTTTTA	ACAAATCCGGTAAGAGAACTGTACATTCGAGTCTGATTGTCCCATGTGGACTTATTTTTA	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_016224	exon2	c.90_99del	p.30_33del	ACAATCACAAATC	.	94	0	71	0	.	.
FKRP	79147	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	47258782	47258782	+	Silent	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_024301	exon4	c.G75A	p.S25S	TGTCTCGTGGCTG	.	78	15	110	0	.	.
GZF1	64412	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	23349409	23349409	+	Silent	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_022482	exon3	c.T1470C	p.P490P	AAGACCTTTTATG	.	87	36	112	0	.	.
PEX11B	8799	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	145518133	145518133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_003846	exon3	c.G235A	p.D79N	CTATCAGATGTTG	.	51	17	48	0	.	.
CPS1	1373	hgsc.bcm.edu	37	2	211464283	211464283	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	CPS1,NS,carcinoma,0,1	CPS1	NM_001122633	exon15	c.G1565T	p.C522F	TGAACTGTGGTGA	.	42	2	40	0	.	0
RTBDN	83546	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	12939521	12939521	+	Silent	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001270440	exon5	c.A411G	p.L137L	CCCCAATAGCCGC	.	23	7	36	0	.	.
MED16	10025	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	875282	875282	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_005481	exon10	c.A1733G	p.D578G	AGCCGGTCGCCGG	.	89	28	105	0	.	.
DUSP18	150290	hgsc.bcm.edu	37	22	31059695	31059695	+	Missense_Mutation	SNP	C	C	T	rs200346696	bycluster	TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	DUSP18,caecum,carcinoma,0,1	DUSP18	NM_152511	exon2	c.G296A	p.R99H	AAAGTACGGCCCT	.	34	3	40	0	0.001	0
OTUD7A	161725	hgsc.bcm.edu	37	15	31794022	31794022	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	OTUD7A,NS,malignant_melanoma,0,1	OTUD7A	NM_130901	exon8	c.G1021A	p.G341R	TCCCTCCGAATGG	.	34	2	41	0	.	0
BMP7	655	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	55777538	55777538	+	Silent	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001719	exon3	c.G753A	p.T251T	ATCCAGCGTCTCC	.	21	4	23	0	.	.
PARP4	143	hgsc.bcm.edu	37	13	25064843	25064843	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	PARP4,NS,carcinoma,0,1	PARP4	NM_006437	exon10	c.C1177A	p.L393I	CCCTGAGAAATTC	.	70	3	106	0	.	0
RRN3P1	730092	hgsc.bcm.edu	37	16	21821976	21821976	+	RNA	SNP	C	C	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	TGGATACAAAAAA	.	30	4	37	0	.	.
CADM4	199731	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	44130107	44130107	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_145296	exon6	c.G711T	p.E237D	GTCTCCCTCCCTC	.	48	11	54	0	.	.
COL20A1	57642	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	61944199	61944199	+	Silent	SNP	C	C	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_020882	exon16	c.C1989A	p.V663V	TGCAGTCCAGCTG	.	34	9	32	0	.	.
TTC28	23331	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	28394632	28394632	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001145418	exon16	c.T5015C	p.F1672S	GAGTAGAAGGCAT	.	35	7	36	0	.	.
FAM5C	339479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	190068073	190068073	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_199051	exon8	c.G1376A	p.R459H	CCGCAGCGGGTGC	.	16	6	19	0	.	.
NT5DC3	51559	hgsc.bcm.edu;bcgsc.ca	37	12	104171615	104171615	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001031701	exon14	c.G1639A	p.A547T	ACTTGGCCTGGGC	.	51	4	45	0	.	.
PEG3	5178	hgsc.bcm.edu	37	19	57335782	57335782	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	ZIM2_ENST00000326441,right_lower_lobe,carcinoma,0,4	ZIM2_ENST00000326441	NM_001146184	exon3	c.C242A	p.T81N	TCCTTGGTGCGGG	.	32	2	27	0	.	0
TLE1	7088	hgsc.bcm.edu	37	9	84226713	84226713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	TLE1,NS,carcinoma,0,1	TLE1	NM_005077	exon13	c.G1225A	p.A409T	CCACGGCGGCCGC	.	56	2	65	0	.	0
KCNK4	50801	hgsc.bcm.edu	37	11	64064727	64064727	+	Silent	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	KCNK4,rectum,carcinoma,0,1	KCNK4	NM_033310	exon4	c.C450T	p.I150I	TGGCATCGGTCAC	.	26	3	34	0	.	0
GJA9	81025	hgsc.bcm.edu;bcgsc.ca	37	1	39340249	39340249	+	Silent	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_030772	exon2	c.C1522A	p.R508R	GAACCCGCCTACC	.	70	4	67	0	.	.
MGA	23269	hgsc.bcm.edu	37	15	41961679	41961679	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	MGA,NS,carcinoma,0,2	MGA	NM_001080541	exon2	c.C587A	p.S196Y	TGCACTCTATGCA	.	19	2	20	0	.	0
ZNF727	442319	hgsc.bcm.edu	37	7	63529386	63529386	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	ZNF727,NS,carcinoma,0,1	ZNF727	NM_001159522	exon2	c.T121G	p.F41V	AACCTGTTCTCCT	.	90	6	103	1	.	0
RNR1	6052	hgsc.bcm.edu	37	MT	1072	1072	+	RNA	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	CAAACTGGGATTA	.	60	12	62	0	.	.
TMEM132E	124842	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	32955682	32955682	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_207313	exon4	c.G829A	p.A277T	TCAACAGCCACCG	.	47	8	46	0	.	.
UBR3	130507	hgsc.bcm.edu	37	2	170780438	170780438	+	Splice_Site	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_172070	exon12	c.1867-1G>T	.	ATTCCAGCCAGCA	.	93	3	67	0	.	.
ARID1B	57492	hgsc.bcm.edu	37	6	157469954	157469954	+	Missense_Mutation	SNP	G	G	T	rs146077641	alternate_allele	TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	ARID1B,NS,carcinoma,0,1	ARID1B	NM_020732	exon9	c.G2748T	p.M916I	CAGCATGACCCCC	.	32	3	42	1	.	0
ND4L	0	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	MT	10668	10668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	ENST00000361335	exon1	c.G199A	p.A67T	GTCTTTGCCGCCT	.	36	31	47	0	.	.
THAP3	90326	hgsc.bcm.edu	37	1	6692962	6692962	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	THAP3_ENST00000054650,NS,carcinoma,0,1	THAP3_ENST00000054650	NM_001195753	exon6	c.T545C	p.L182P	ATGCCCTTTTGGA	.	50	3	71	1	.	0
TRIM51HP	440041	hgsc.bcm.edu	37	11	55062174	55062174	+	RNA	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	ACATCTGCTAAAA	.	133	35	177	0	.	.
C8B	732	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	57409394	57409394	+	Silent	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_000066	exon8	c.C1209T	p.C403C	ACCTCTGCATTTG	.	62	12	56	0	.	.
C6orf164	63914	hgsc.bcm.edu;ucsc.edu	37	6	88107925	88107925	+	RNA	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	TGCTGAATAAAGC	.	13	5	21	0	.	.
SIK2	23235	hgsc.bcm.edu	37	11	111572283	111572283	+	Silent	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_015191	exon6	c.G711A	p.P237P	GATTCCGTATTTC	.	91	4	107	0	.	.
RPSAP58	388524	hgsc.bcm.edu	37	19	24010294	24010294	+	RNA	SNP	C	C	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	RPSAP58_ENST00000496398,NS,carcinoma,0,40	RPSAP58_ENST00000496398	.	.	.	.	ACTAACCAGATCC	.	41	2	45	0	.	0
ERVK13-1	100507321	hgsc.bcm.edu	37	16	2712543	2712543	+	RNA	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	GGAGCCCAATCAA	.	62	6	67	0	.	.
C16orf86	388284	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	67702138	67702138	+	Missense_Mutation	SNP	G	G	A	rs369814761		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001012984	exon4	c.G589A	p.V197I	CAGTACGTCAACT	.	33	8	38	0	.	.
TTN	7273	hgsc.bcm.edu	37	2	179569097	179569097	+	Silent	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	TTN_ENST00000342992,NS,carcinoma,0,1	TTN_ENST00000342992	NM_001267550	exon106	c.G30000A	p.L10000L	TTCTTTCAGAGTC	.	48	2	36	0	.	0
ADD2	119	hgsc.bcm.edu	37	2	70933527	70933527	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	ADD2_ENST00000264436,colon,carcinoma,0,2	ADD2_ENST00000264436	NM_001185055	exon2	c.C62T	p.T21M	GGGACCGTCTCTT	.	39	2	62	0	.	0
SUGT1	10910	hgsc.bcm.edu	37	13	53250435	53250435	+	Missense_Mutation	SNP	C	C	T	rs371011852		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001130912	exon12	c.C794T	p.T265M	TGCCTACGCCAAA	.	48	4	43	0	.	.
NET1	10276	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	5496410	5496410	+	Silent	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001047160	exon9	c.A951G	p.K317K	AGTCAAATACCCT	.	55	8	60	0	.	.
CYP2S1	29785	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	41709463	41709463	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_030622	exon7	c.G1085A	p.R362Q	CGCAGCGGCTGCT	.	71	11	85	0	.	.
PLCL1	5334	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	198950711	198950711	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_006226	exon2	c.C2470T	p.R824W	GGATATCGGCATG	.	67	14	87	0	.	.
ASB7	140460	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	101170164	101170164	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_024708	exon5	c.A734G	p.Y245C	GGAACTATGAAGG	.	73	21	77	0	.	.
ZNF418	147686	hgsc.bcm.edu;bcgsc.ca	37	19	58437921	58437921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_133460	exon4	c.G1628T	p.C543F	TTTCCACATTCTC	.	61	4	50	0	.	.
ZNF12	7559	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	6731851	6731851	+	Missense_Mutation	SNP	T	T	C	rs367716418		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_016265	exon5	c.A722G	p.Y241C	CACTTATAGGGCT	.	57	8	54	0	.	.
EHMT2	10919	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	31855598	31855598	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_006709	exon14	c.G1886A	p.R629Q	GCCTCCCGGCCTG	.	22	6	32	0	.	.
TRAK1	22906	hgsc.bcm.edu	37	3	42260987	42260987	+	Silent	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	TRAK1_ENST00000543338,lower_third,carcinoma,0,2	TRAK1_ENST00000543338	NM_001042646	exon15	c.G1965A	p.A655A	TTTAGCGCACCAT	.	43	2	58	0	.	0
GPR17	2840	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	128407628	128407628	+	Silent	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_005291	exon2	c.A42G	p.P14P	GCCCCCAAGAGAG	.	88	27	103	0	.	.
NIPBL	25836	hgsc.bcm.edu;bcgsc.ca	37	5	37007576	37007576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_015384	exon18	c.G4239T	p.Q1413H	TCTTCAGGTAAGA	.	70	4	59	0	.	.
ZNF703	80139	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	37555950	37555950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_025069	exon2	c.G1531A	p.A511T	GCCGCCGCCGCCG	.	35	9	30	0	.	.
ITGA9	3680	hgsc.bcm.edu	37	3	37670693	37670693	+	Missense_Mutation	SNP	G	G	A	rs369282174		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	ITGA9,NS,carcinoma,0,1	ITGA9	NM_002207	exon16	c.G1705A	p.V569I	CAGGACGTCATCA	.	40	2	45	0	.	0
AAK1	22848	hgsc.bcm.edu	37	2	69741780	69741780	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	AAK1_ENST00000409085,NS,carcinoma,0,2	AAK1_ENST00000409085	NM_014911	exon13	c.G1599C	p.Q533H	CTGCTGCTGGTAG	.	45	3	43	1	.	0
MEI1	150365	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	42191438	42191438	+	Silent	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_152513	exon29	c.T3558C	p.S1186S	TAGCAGTGTCCTC	.	96	26	102	0	.	.
EXD1	161829	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	41483652	41483652	+	Silent	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_152596	exon8	c.A678G	p.Q226Q	TAGTTTTTGTCTC	.	318	72	289	0	.	.
LRRC15	131578	hgsc.bcm.edu;broad.mit.edu	37	3	194080098	194080098	+	Missense_Mutation	SNP	C	C	T	rs372437949		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	LRRC15_ENST00000439944,NS,carcinoma,0,2	LRRC15_ENST00000439944	NM_001135057	exon3	c.G1693A	p.V565I	AGCCGACGCAGGC	.	18	3	20	0	.	0
KLHL20	27252	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	173743534	173743534	+	Silent	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_014458	exon9	c.A1386G	p.L462L	GTTCTTATATGCT	.	110	6	94	0	.	.
RPSAP58	388524	hgsc.bcm.edu	37	19	24010099	24010099	+	RNA	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	RPSAP58_ENST00000496398,NS,carcinoma,0,2	RPSAP58_ENST00000496398	.	.	.	.	GATGGCATCTATA	.	39	2	37	0	.	0
PSMA5	5686	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	109964511	109964511	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_002790	exon2	c.C67T	p.Q23X	CCACTTGAAATAA	.	57	15	64	0	.	.
CYP4F3	4051	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	15758064	15758064	+	Missense_Mutation	SNP	C	C	T	rs200536182	bycluster	TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	CYP4F3,NS,malignant_melanoma,0,1	CYP4F3	NM_001199209	exon5	c.C455T	p.T152M	TGCTGACGCCTGC	.	57	9	85	0	.	0
DLGAP2	9228	hgsc.bcm.edu	37	8	1616531	1616531	+	Missense_Mutation	SNP	C	C	T	rs370388753		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_004745	exon6	c.C1607T	p.P536L	CCCCACCGGTGCC	.	93	5	110	0	.	.
SV2C	22987	hgsc.bcm.edu	37	5	75428097	75428097	+	Silent	SNP	C	C	T	rs370011561		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	SV2C,NS,adenocarcinoma,0,3	SV2C	NM_014979	exon2	c.C522T	p.F174F	TGGCTTCGTGTTA	.	48	2	39	0	.	0
FERD3L	222894	hgsc.bcm.edu	37	7	19184752	19184752	+	Silent	SNP	C	C	T	rs73079402		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	FERD3L,NS,carcinoma,0,1	FERD3L	NM_152898	exon1	c.G234A	p.E78E	CTCTTCCTCCTCC	.	14	2	25	0	.	0
TPTE2P6	374491	hgsc.bcm.edu	37	13	25163341	25163341	+	RNA	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	TAATTGGTGAGAC	.	72	4	87	0	.	.
COL27A1	85301	hgsc.bcm.edu	37	9	116931158	116931158	+	Silent	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	COL27A1,NS,carcinoma,0,1	COL27A1	NM_032888	exon3	c.G1323T	p.R441R	CACCCGGCCCCTA	.	42	2	52	0	.	0
EPHA8	2046	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	22915663	22915663	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_020526	exon5	c.C1279T	p.R427W	CCCCGCCGGGCCG	.	57	11	77	0	.	.
BIRC2	329	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	102221620	102221620	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001256163	exon3	c.G941C	p.R314T	GCTTGAGGTGTTG	.	72	17	91	0	.	.
FBN3	84467	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	8150345	8150345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_032447	exon55	c.G6989A	p.R2330Q	CAGCCCCGGCCAC	.	34	9	32	0	.	.
PHF3	23469	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	64394977	64394977	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_015153	exon3	c.A1354C	p.N452H	CAGTTGAATGCTA	.	73	18	78	0	.	.
ITGB8	3696	hgsc.bcm.edu;bcgsc.ca	37	7	20441344	20441344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_002214	exon10	c.G1282T	p.V428F	ATTTAGGTTCTTT	.	48	4	45	0	.	.
DOCK10	55619	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	225704784	225704784	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_014689	exon24	c.A2667T	p.L889F	ATTCAATAAGTTC	.	73	6	67	0	.	.
PPP1R15A	23645	hgsc.bcm.edu	37	19	49377974	49377974	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_014330	exon2	c.C1484T	p.A495V	AGGAAGCTGCTGA	.	64	4	83	0	.	.
ZAK	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	174085956	174085956	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_133646	exon12	c.A1066T	p.M356L	GCAGAGATGTCAT	.	28	5	43	0	.	.
CACNA1D	776	hgsc.bcm.edu	37	3	53810928	53810928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	CACNA1D_ENST00000350061,NS,carcinoma,0,2	CACNA1D_ENST00000350061	NM_000720	exon38	c.G4592A	p.R1531H	TTCGACGCATCCA	.	72	3	77	0	.	0
ALMS1P	200420	hgsc.bcm.edu	37	2	73900918	73900918	+	RNA	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	CTCTCTCTTTTTT	.	21	4	25	0	.	.
FNDC3A	22862	hgsc.bcm.edu	37	13	49719949	49719949	+	Silent	SNP	C	C	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001079673	exon8	c.C855A	p.T285T	ACTTACCTGGTCA	.	93	3	91	0	.	.
CCDC178	374864	hgsc.bcm.edu	37	18	30926184	30926184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	C18orf34_ENST00000383096,rectum,carcinoma,+1,2	C18orf34_ENST00000383096	NM_001105528	exon8	c.G649A	p.V217M	TCTGCACAGCCAA	.	74	3	96	0	.	+1
ZNF208	7757	hgsc.bcm.edu	37	19	22155346	22155346	+	Silent	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	ZNF208_ENST00000428290,NS,carcinoma,0,3	ZNF208_ENST00000428290	NM_007153	exon4	c.A2490G	p.E830E	GGGCTTTTCTCCA	.	71	4	61	0	.	0
RPSAP58	388524	hgsc.bcm.edu	37	19	24010116	24010116	+	RNA	SNP	C	C	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	RPSAP58_ENST00000496398,NS,carcinoma,0,2	RPSAP58_ENST00000496398	.	.	.	.	AAATCTCAAGAGG	.	45	2	46	0	.	0
FAXDC2	10826	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	154202045	154202045	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_032385	exon7	c.C665T	p.P222L	TCTATAGGGTGGG	.	76	21	75	0	.	.
SPTAN1	6709	hgsc.bcm.edu	37	9	131348107	131348107	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	SPTAN1,colon,carcinoma,0,1	SPTAN1	NM_003127	exon19	c.C2641T	p.Q881X	GCTTCCCAGCGTC	.	23	2	35	0	.	0
CDKN2A	1029	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	21971003	21971003	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	CDKN2A_ENST00000498124,bladder,carcinoma,0,13	CDKN2A_ENST00000498124	NM_058195	exon2	c.G398C	p.X133S	GCTCCTCAGCCAG	.	23	9	25	0	.	0
SEC14L4	284904	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	30888052	30888052	+	Missense_Mutation	SNP	G	G	A	rs369641628		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001161368	exon9	c.C755T	p.P252L	CACTTGGGGTTGC	.	61	17	54	0	.	.
FAM208A	23272	hgsc.bcm.edu	37	3	56658514	56658514	+	Silent	SNP	C	C	T	rs150032629		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	FAM208A,NS,carcinoma,0,4	FAM208A	NM_001112736	exon23	c.G4476A	p.S1492S	TGACTGCGACTCA	.	73	3	92	0	0.000	0
GNPTAB	79158	hgsc.bcm.edu	37	12	102147186	102147186	+	Missense_Mutation	SNP	C	C	T	rs141007019	bycluster	TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	GNPTAB,NS,carcinoma,0,3	GNPTAB	NM_024312	exon19	c.G3566A	p.R1189Q	CGGTTTCGATACT	.	46	2	40	0	0.000	0
STOX2	56977	hgsc.bcm.edu	37	4	184932087	184932087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	STOX2_ENST00000308497,colon,carcinoma,0,1	STOX2_ENST00000308497	NM_020225	exon3	c.G2096T	p.S699I	TATTTAGCAAAGA	.	49	2	45	0	.	0
CAMSAP1	157922	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	138703285	138703285	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_015447	exon17	c.C4679A	p.S1560X	CGGTCTGAGCTGT	.	46	23	59	0	.	.
HIST3H2A	92815	hgsc.bcm.edu	37	1	228645259	228645259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_033445	exon1	c.C260T	p.A87V	CGGATGGCCAGCT	.	81	4	75	0	.	.
ZNF208	7757	hgsc.bcm.edu	37	19	22154452	22154452	+	Silent	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	ZNF208_ENST00000428290,right_lower_lobe,carcinoma,0,6	ZNF208_ENST00000428290	NM_007153	exon4	c.T3384C	p.L1128L	TTTAGTAAGGATT	.	45	2	54	1	.	0
GPD2	2820	hgsc.bcm.edu;broad.mit.edu	37	2	157427724	157427724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	GPD2,right_lower_lobe,carcinoma,0,1	GPD2	NM_001083112	exon13	c.G1687T	p.V563F	CTAAATGTCCAGG	.	88	4	87	0	.	0
BAI1	575	hgsc.bcm.edu	37	8	143570419	143570419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	BAI1,right_lower_lobe,carcinoma,0,1	BAI1	NM_001702	exon14	c.G2476T	p.V826L	GTGTTTGTGGTGG	.	40	2	40	0	.	0
SNX29	92017	hgsc.bcm.edu	37	16	12136879	12136879	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	RUNDC2A,NS,carcinoma,0,2	RUNDC2A	NM_032167	exon5	c.G373T	p.E125X	CTCAACGAACACT	.	42	2	50	0	.	0
ARHGAP24	83478	hgsc.bcm.edu	37	4	86921760	86921760	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_001025616	exon10	c.C2132T	p.A711V	AAGATGCCGAGAA	.	81	3	103	0	.	.
ZNF136	7695	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	12297963	12297963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_003437	exon4	c.G770A	p.C257Y	AGGTATGTGGGAA	.	68	8	60	0	.	.
ALPK3	57538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	85400849	85400849	+	Silent	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_020778	exon6	c.G3486A	p.L1162L	TTCCCTGAAGAAC	.	30	4	35	0	.	.
PA2G4	5036	hgsc.bcm.edu	37	12	56503676	56503676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	PA2G4,NS,carcinoma,0,1	PA2G4	NM_006191	exon7	c.G586T	p.D196Y	GTCATCGATGGAG	.	42	2	33	0	.	0
KCNIP4	80333	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	20736336	20736336	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_025221	exon5	c.T392C	p.I131T	AGCAAAATGGAAA	.	102	24	100	0	.	.
HMGCL	3155	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	24140684	24140684	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_000191	exon5	c.C493T	p.R165W	ACCCCCGCACAGA	.	20	5	38	0	.	.
LRRC9	341883	hgsc.bcm.edu	37	14	60394514	60394514	+	RNA	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	ATACTATGTGAAG	.	33	11	41	0	.	.
RFWD2	64326	hgsc.bcm.edu	37	1	175956191	175956191	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_022457	exon18	c.C2021A	p.T674N	AGCAAAGTCTTAG	.	44	4	48	0	.	.
DENND4B	9909	broad.mit.edu	37	1	153907303	153907303	+	Silent	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	DENND4B_ENST00000361217,bladder,carcinoma,0,2	DENND4B	NM_014856	exon18	c.G2706A	p.Q902Q	CTGCTGCTGTTGC	.	26	3	26	0	.	210
GBP1	2633	broad.mit.edu	37	1	89528730	89528730	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	GBP1,middle_lobe,carcinoma,0,1	GBP1	NM_002053	exon2	c.A188G	p.K63R	TCACCCTTTTTCT	.	92	3	94	1	.	68
GPN2	54707	broad.mit.edu	37	1	27210710	27210710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	GPN2,bladder,carcinoma,-2,1	GPN2	NM_018066	exon4	c.G801T	p.E267D	TCGCTGCTCTTGG	.	13	3	26	0	.	18
MACF1	23499	broad.mit.edu	37	1	39798190	39798190	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	MACF1	.	.	.	.	TGCAAAATGGACA	.	20	3	23	0	.	909
RD3	343035	broad.mit.edu;bcgsc.ca	37	1	211652604	211652604	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	RD3	NM_183059	exon3	c.T362C	p.V121A	TGCAGCACCGAGC	.	20	4	30	0	.	26
FLJ31813	0	broad.mit.edu	37	10	51826259	51826259	+	RNA	DEL	A	A	-	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	AAAAGCAAAAAAA	.	12	5	8	0	.	.
OR51A4	401666	broad.mit.edu	37	11	4967989	4967989	+	Silent	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	OR51A4	NM_001005329	exon1	c.C342A	p.S114S	GACTGAGGACTCC	.	42	3	58	0	.	73
OR5D16	390144	broad.mit.edu;bcgsc.ca	37	11	55606662	55606662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	OR5D16,NS,carcinoma,+2,1	OR5D16	NM_001005496	exon1	c.G435A	p.M145I	TGCCATGCTGGTG	.	60	5	38	0	.	94
POC1B	282809	broad.mit.edu	37	12	89891025	89891025	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	POC1B	NM_172240	exon3	c.C195A	p.S65R	CTGCACGCTGGTT	.	53	3	40	0	.	41
.	0	broad.mit.edu	37	14	65733835	65733838	+	RNA	DEL	CTTT	CTTT	-	rs370367895	bycluster	TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	TTCCTGCTTTCTT	.	7	2	5	0	.	.
.	0	broad.mit.edu	37	15	102297875	102297875	+	RNA	SNP	A	A	G	rs75560924		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	ACTCGCATGGGAA	.	38	4	27	0	G|1.000;|0.000	.
OR10H1	26539	broad.mit.edu	37	19	15918259	15918259	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	OR10H1	NM_013940	exon1	c.G589A	p.A197T	CTTTGGCCACCAC	.	71	3	80	0	.	59
SCN2A	6326	broad.mit.edu	37	2	166231253	166231253	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	SCN2A	NM_001040143	exon21	c.G4031T	p.C1344F	TGGTTTGTCTGAT	.	54	4	56	1	.	589
RBBP8NL	140893	broad.mit.edu	37	20	60991830	60991830	+	Missense_Mutation	SNP	C	C	T	rs371268446		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	C20orf151,colon,carcinoma,-1,1	.	NM_080833	exon5	c.G299A	p.R100H	AAGATGCGCTGCA	.	41	3	47	0	.	.
TPTEP1	0	broad.mit.edu	37	22	17128576	17128576	+	RNA	SNP	A	A	C	rs2381064		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	GCCCGTAGTTTTG	.	45	4	46	1	.	.
BAP1	8314	broad.mit.edu	37	3	52436651	52436667	+	Frame_Shift_Del	DEL	TGAACTCATCGTAGTTG	TGAACTCATCGTAGTTG	-	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	BAP1	NM_004656	exon16	c.2007_2023del	p.669_675del	TGCAGATGAACTC	.	9	4	12	0	.	371
.	0	broad.mit.edu	37	3	22424366	22424366	+	RNA	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	TTTGTTGACATTC	.	38	5	39	0	.	.
KBTBD8	84541	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	67054577	67054577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	KBTBD8	NM_032505	exon3	c.G1186A	p.G396R	GCAATCGGAGGTC	.	38	13	72	1	.	101
SLC9C1	285335	broad.mit.edu	37	3	111985124	111985124	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_183061	exon8	c.C839A	p.T280K	AAACTTGTAGAAT	.	304	5	370	2	.	.
ACTR3C	653857	broad.mit.edu	37	7	149990455	149990455	+	Silent	SNP	T	T	C	rs2689611		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	Q9C0K3_HUMAN,NS,carcinoma,0,1	.	NM_001164459	exon3	c.A99G	p.T33T	CGTTAATGTACGT	.	81	5	86	0	.	.
DPY19L2P2	0	broad.mit.edu	37	7	102898150	102898150	+	RNA	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	ATGTGCGATACCA	.	165	4	154	1	.	.
NOS3	4846	broad.mit.edu	37	7	150704218	150704218	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	NOS3,NS,carcinoma,-2,1	NOS3	NM_000603	exon17	c.G1966A	p.A656T	TCCCGGGCATACC	.	43	3	50	0	.	131
BTN2A2	10385	ucsc.edu	37	6	26393052	26393052	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	BTN2A2	NM_006995	exon8	c.A1429T	p.T477S	GCCTTTACTGTGC	.	41	8	26	2	.	87
BTN2A2	10385	ucsc.edu	37	6	26393054	26393054	+	Silent	SNP	T	T	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	BTN2A2	NM_006995	exon8	c.T1431C	p.T477T	CTTTACTGTGCCT	.	40	8	26	2	.	87
EPN2	22905	ucsc.edu;bcgsc.ca	37	17	19186722	19186722	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	EPN2	NM_148921	exon3	c.G290T	p.R97L	AGTGCCGGGAGAA	.	32	4	39	0	.	52
GRIN2D	2906	ucsc.edu;bcgsc.ca	37	19	48925062	48925062	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	GRIN2D	NM_000836	exon10	c.G2112T	p.Q704H	GGAGCAGTACCCG	.	32	4	36	0	.	76
RBMX	27316	ucsc.edu	37	X	135958704	135958704	+	Missense_Mutation	SNP	G	G	C	rs112089728	bycluster	TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	RBMX	NM_002139	exon5	c.C499G	p.P167A	CTGAAGGTGCAGA	.	52	14	34	4	.	149
CEP104	9731	bcgsc.ca	37	1	3750520	3750520	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	CEP104	NM_014704	exon12	c.C1565T	p.T522I	TGAGCTGTTTCAA	.	54	4	77	0	.	79
LOC100129138	0	bcgsc.ca	37	1	104615792	104615792	+	RNA	SNP	C	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	GGGGGCCGGAGAG	.	27	8	22	0	.	.
.	127608	bcgsc.ca	37	1	248098009	248098009	+	Silent	SNP	A	G	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	CAAAAAAATGAAT	.	38	10	46	0	.	.
LMAN2L	81562	bcgsc.ca	37	2	97373516	97373516	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	LMAN2L	NM_001142292	exon8	c.C872A	p.P291Q	TCTTCTGGGGTTC	.	48	4	64	0	.	27
TMEM184C	55751	bcgsc.ca	37	4	148539206	148539206	+	Silent	SNP	C	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	TMEM184C	NM_018241	exon1	c.C99T	p.C33C	CCTATGCGTGTGG	.	67	4	94	0	.	25
.	0	bcgsc.ca	37	5	2787892	2787892	+	RNA	SNP	G	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	CCCACAGTATTGG	.	52	7	37	0	.	.
DNAH5	1767	bcgsc.ca	37	5	13830277	13830277	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	DNAH5,colon,carcinoma,-1,1	DNAH5	NM_001369	exon37	c.G6107A	p.R2036H	TCAATACGGTTAA	.	64	4	39	0	.	868
SLC36A1	206358	bcgsc.ca	37	5	150853233	150853233	+	Splice_Site	SNP	G	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	SLC36A1	NM_078483	exon8	c.724-1G>T	.	CTTTCAGAGGATC	.	49	4	48	0	.	50
PNLDC1	154197	bcgsc.ca	37	6	160225658	160225658	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	PNLDC1	NM_173516	exon6	c.G417T	p.W139C	GAACTGGAGAGTT	.	70	5	76	0	.	66
.	441420	bcgsc.ca	37	9	45376206	45376206	+	RNA	SNP	A	C	C	rs372171742		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	GGACCAAACCAAC	.	41	7	51	2	.	.
SNX15	29907	bcgsc.ca	37	11	64799964	64799964	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	SNX15	NM_147777	exon3	c.A197G	p.H66R	ACACCCACCGCAA	.	46	5	63	0	.	35
POLE	5426	bcgsc.ca	37	12	133253969	133253969	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	POLE	NM_006231	exon8	c.G781A	p.D261N	GGTCATCTCGGCG	.	55	4	56	0	.	416
.	401730	bcgsc.ca	37	13	23411988	23411988	+	RNA	SNP	A	C	C	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	TTATTAAATTTAT	.	33	5	54	0	.	.
.	0	bcgsc.ca	37	15	20450232	20450232	+	RNA	SNP	G	A	A	rs375441502		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	.	.	.	.	GGGAGCGTTCCTG	.	114	10	124	0	.	.
UBE2Q2	92912	bcgsc.ca	37	15	76183298	76183298	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	UBE2Q2	NM_173469	exon11	c.G972A	p.M324I	CATCATGCAAATA	.	52	4	66	0	.	26
PIEZO2	63895	bcgsc.ca	37	18	10718203	10718203	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_022068	exon34	c.G4910A	p.G1637E	CCTGGTCCATCGG	.	35	4	35	0	.	.
ZNF534	147658	bcgsc.ca	37	19	52941105	52941105	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	ZNF534	NM_001143939	exon4	c.G431T	p.G144V	TTTATGGATGTAA	.	47	4	45	0	.	105
TMEM257	9142	bcgsc.ca	37	X	144909307	144909307	+	Silent	SNP	C	T	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	.	.	NM_004709	exon1	c.C112T	p.L38L	TCCCCACTGACTA	.	79	4	70	0	.	.
KCNMB1	3779	hgsc.bcm.edu	37	5	169805956	169805956	+	Missense_Mutation	SNP	C	C	T	rs2301149	bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes;alternate_allele	TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	KCNMB1,NS,carcinoma,0,1	KCNMB1	NM_004137	exon4	c.G328A	p.E110K	TGTCCACGCTGCC	.	59	3	53	0	.	0
PCDH15	65217	hgsc.bcm.edu	37	10	55566583	55566583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-3X-AAVE-01A-11D-A417-09	TCGA-3X-AAVE-10A-01D-A41A-09	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	57584133-036a-4eab-9c63-c0fdd134ae42	36d5f070-dd59-4be0-85b4-ce3e1cb99d06	PCDH15_ENST00000414778,NS,carcinoma,0,1	PCDH15_ENST00000414778	.	p.S1604Y	.	.	TCAGTAGAAAATG	.	38	2	45	0	.	0
