Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq
ADAMTS5	11096	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	28296456	28296456	+	Silent	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ADAMTS5	NM_007038	exon8	c.G2709A	p.Q903Q	TCCATCCTGGCAC	.	43.0	15.0	56.0	0.0	.	229
AEN	64782	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	89169543	89169543	+	Nonsense_Mutation	SNP	C	C	T	rs199532354		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	AEN	NM_022767	exon2	c.C103T	p.R35X	AGGAGCCGACAGC	.	23.0	5.0	15.0	0.0	C|0.998;T|0.002	226
AFG3L2	10939	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	12356735	12356735	+	Silent	SNP	T	T	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	AFG3L2	NM_006796	exon9	c.A1122C	p.G374G	CTCAGATCCACTA	.	51.0	11.0	58.0	0.0	.	90
ALB	213	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	74283386	74283387	+	Frame_Shift_Del	DEL	TG	TG	-	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	TG	TG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ALB	NM_000477	exon11	c.1428_1428del	p.476_476del	AGACTATGTGAGT	.	68.0	23.0	111.0	0.0	.	96
ALB	213	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	74285295	74285296	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ALB	NM_000477	exon13	c.1724_1725insC	p.F575fs	ATGATTTCGCAGC	.	62.0	18.0	51.0	0.0	.	96
ARHGAP11B	89839	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	30926529	30926529	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ARHGAP11B	NM_001039841	exon4	c.A454G	p.K152E	GAGGAAAAGAATA	.	431.0	113.0	461.0	0.0	.	22
ASXL2	55252	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	25965885	25965885	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ASXL2	NM_018263	exon12	c.G3321T	p.M1107I	ACCCAGCATGAAC	.	57.0	13.0	35.0	0.0	.	23
BMPR1B	658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	96052422	96052422	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	BMPR1B	NM_001256793	exon8	c.A925G	p.T309A	CTAATCACAGACT	.	132.0	33.0	162.0	0.0	.	1378
BPIFB4	149954	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	31672781	31672781	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	.	NM_182519	exon4	c.G761A	p.R254H	ACACCCGTGTGGC	.	33.0	12.0	32.0	0.0	.	.
C22orf26	55267	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	22	46449729	46449729	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	C22orf26	NM_018280	exon1	c.C245A	p.P82Q	AAACGCGGAGCAC	.	15.0	5.0	12.0	0.0	.	90
C2CD3	26005	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	73824849	73824849	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	C2CD3	NM_015531	exon11	c.G1819T	p.A607S	TGGAGGCGAGTCG	.	51.0	5.0	47.0	0.0	.	75
C4orf17	84103	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	100463066	100463066	+	Splice_Site	SNP	G	G	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	C4orf17	NM_032149	exon9	c.881-1G>C	.	ATTTCAGAGGCTG	.	176.0	10.0	232.0	0.0	.	90
CACNA1A	773	bcgsc.ca;mdanderson.org	37	19	13325091	13325091	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	CACNA1A	NM_001127221	exon40	c.C5899G	p.R1967G	TCTGCCGGTAGTA	.	17.0	4.0	21.0	0.0	.	67
CAMSAP3	57662	ucsc.edu;bcgsc.ca	37	19	7673101	7673101	+	Silent	SNP	G	G	A	rs199927493	byfrequency	TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	.	NM_001080429	exon7	c.G792A	p.A264A	GGCCGCGCTGGCC	.	37.0	4.0	53.0	0.0	G|0.991;A|0.009	.
CAPN11	11131	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	44147887	44147887	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	CAPN11	NM_007058	exon14	c.C1627A	p.H543N	GAGAAGCACAGCG	.	31.0	8.0	37.0	0.0	.	136
CBLB	868	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	105586253	105586253	+	Splice_Site	DEL	C	C	-	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	CBLB	NM_170662	exon3	c.168+1G>-	.	AACTTACCACTTT	.	56.0	19.0	68.0	0.0	.	849
CD93	22918	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	20	23066708	23066708	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	CD93	NM_012072	exon1	c.C122A	p.S41X	TTGCCCGAGTGGG	.	13.0	4.0	33.0	0.0	.	153
CEP85L	387119	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	118887408	118887408	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	.	NM_001178035	exon4	c.G313T	p.V105L	GCATCACATGGGC	.	46.0	13.0	61.0	0.0	.	.
COL5A2	1290	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	189907465	189907465	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	COL5A2	NM_000393	exon49	c.C3506G	p.P1169R	GGTCCAGGGATTC	.	42.0	17.0	46.0	0.0	.	92
COQ6	51004	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	14	74428466	74428466	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	COQ6	NM_182476	exon11	c.G1237T	p.E413X	GGTTATGAAACAG	.	40.0	13.0	52.0	0.0	.	90
CTDSPL2	51496	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	44816346	44816346	+	Silent	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	CTDSPL2	NM_016396	exon13	c.T1375C	p.L459L	TTTCGCTTGCATG	.	49.0	24.0	46.0	0.0	.	90
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	41268766	41268766	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	CTNNB1,NS,Wilms_tumour,0	CTNNB1	NM_001098209	exon7	c.A1004C	p.K335T	ACGAAAAACTACT	.	111.0	24.0	94.0	0.0	.	24361
CYP26B1	56603	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	72374800	72374800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	CYP26B1	NM_019885	exon1	c.G164T	p.G55V	GGGAAGCCCATGG	.	49.0	11.0	63.0	0.0	.	92
EFTUD2	9343	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	42964016	42964016	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	EFTUD2	NM_004247	exon3	c.G208A	p.E70K	CCTCCTCGGCTGT	.	50.0	12.0	58.0	0.0	.	91
EIF4E	1977	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	99850252	99850252	+	Silent	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	EIF4E	NM_001130679	exon1	c.C12T	p.V4V	CGGTTCGACAGTC	.	46.0	12.0	54.0	0.0	.	1270
EIF4G2	1982	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	10824602	10824602	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	EIF4G2	NM_001042559	exon11	c.A971G	p.N324S	ATTTGATTGATCG	.	54.0	15.0	58.0	0.0	.	91
ENTPD1	953	hgsc.bcm.edu;bcgsc.ca	37	10	97624496	97624496	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ENTPD1	NM_001164178	exon9	c.G1240T	p.A414S	TCTTACGCTGGAG	.	63.0	4.0	66.0	0.0	.	93
EPHA2	1969	broad.mit.edu;mdanderson.org	37	1	16464616	16464616	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	EPHA2	NM_004431	exon5	c.G1044A	p.W348X	GGGCGTCCAGCGC	.	15.0	4.0	20.0	0.0	.	1419
EWSR1	2130	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	29664336	29664336	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	EWSR1	NM_013986	exon1	c.C11G	p.T4R	CGTCCACGGGTGA	.	43.0	11.0	56.0	0.0	.	3375
EYS	346007	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	65149117	65149117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	EYS	NM_001142800	exon27	c.C5773A	p.Q1925K	AGTCTTGCTTGAC	.	90.0	16.0	146.0	0.0	.	660
FBLN1	2192	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	45960824	45960824	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	FBLN1	NM_006485	exon15	c.G1758T	p.R586S	CTGCAGGGTTCTT	.	41.0	15.0	55.0	0.0	.	515
GABRQ	55879	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	151821124	151821124	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	GABRQ	NM_018558	exon9	c.G1279C	p.A427P	CAGCTGGCCACCT	.	84.0	44.0	64.0	0.0	.	133
GAN	8139	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	81390417	81390417	+	Silent	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	GAN	NM_022041	exon4	c.C661T	p.L221L	TCAGCTCTGTGGG	.	149.0	46.0	132.0	0.0	.	92
GGN	199720	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	38877684	38877684	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	GGN	NM_152657	exon3	c.T218C	p.L73P	AGGGGCAGGGTCG	.	44.0	9.0	64.0	0.0	.	90
GRPEL2	134266	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	148725167	148725167	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	GRPEL2	NM_152407	exon1	c.C65G	p.A22G	GTGCCGCGTGGGA	.	91.0	18.0	133.0	0.0	.	91
HERC2	8924	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	15	28419597	28419597	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	HERC2	NM_004667	exon65	c.T10001G	p.V3334G	TCGTGGACAGAGG	.	211.0	67.0	211.0	0.0	.	234
HIGD1A	25994	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	42826810	42826810	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	HIGD1A	NM_001099668	exon4	c.A277G	p.M93V	AGCCCATACCTAA	.	538.0	108.0	648.0	0.0	.	226
IL18BP	10068	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	71711533	71711533	+	Silent	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	IL18BP	NM_001145057	exon3	c.C165T	p.P55P	CCAGCCCCCAGTG	.	20.0	6.0	26.0	0.0	.	90
INTS2	57508	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	59947136	59947136	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	INTS2	NM_020748	exon21	c.A3016G	p.I1006V	CTGCAATGTACAT	.	70.0	22.0	71.0	0.0	.	206
KCNQ5	56479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	73843259	73843259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	KCNQ5	NM_001160133	exon11	c.G1420A	p.E474K	ACAGCCGAGGGCA	.	48.0	12.0	92.0	0.0	.	158
KIAA0232	9778	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	6863165	6863165	+	Silent	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	KIAA0232	NM_014743	exon7	c.C1056T	p.S352S	TAGTAGCAGTAGC	.	88.0	21.0	107.0	0.0	.	92
KIAA1217	56243	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	24508649	24508649	+	Silent	SNP	A	A	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	KIAA1217	NM_019590	exon2	c.A165G	p.S55S	TGGTTCAGTTTCC	.	66.0	22.0	80.0	0.0	.	98
KRT78	196374	broad.mit.edu;mdanderson.org	37	12	53242690	53242690	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	KRT78	NM_173352	exon1	c.C25T	p.Q9X	CCCTCTGGGCCCG	.	19.0	8.0	22.0	0.0	.	188
KRT81	3887	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	52681386	52681386	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	KRT81	NM_002281	exon6	c.G1020T	p.K340N	CTGGCACTTGGCA	.	50.0	18.0	57.0	0.0	.	90
LAMC1	3915	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	183101589	183101589	+	Silent	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	LAMC1	NM_002293	exon21	c.G3621A	p.T1207T	TGATACGTCAACT	.	101.0	37.0	103.0	1.0	.	252
LAMC3	10319	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	133942439	133942439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	LAMC3,NS,carcinoma,0	LAMC3	NM_006059	exon14	c.G2440A	p.G814R	TGTAGCGGGAACG	.	26.0	10.0	42.0	0.0	.	93
LDHAL6A	160287	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	18499168	18499168	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	LDHAL6A	NM_144972	exon6	c.G712T	p.G238C	TACAGTGGCTATG	.	75.0	16.0	105.0	0.0	.	90
LRRC37B	114659	broad.mit.edu;ucsc.edu	37	17	30351740	30351740	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	LRRC37B	NM_052888	exon2	c.G1690T	p.G564X	TTCCAAGGAAACT	.	446.0	137.0	610.0	2.0	.	92
LRRC8E	80131	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	7960521	7960521	+	Silent	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	LRRC8E	NM_001268284	exon3	c.G33A	p.T11T	GTTCACGGAACAG	.	56.0	21.0	109.0	0.0	.	92
MAN2B1	4125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	12757461	12757461	+	Silent	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	MAN2B1	NM_000528	exon24	c.A3009G	p.S1003S	TTGAACTGAGGCC	.	62.0	13.0	72.0	0.0	.	94
MAT1A	4143	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	82036284	82036284	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	MAT1A	NM_000429	exon6	c.T616G	p.S206A	GCACAGAGATGAC	.	16.0	8.0	19.0	0.0	.	90
MUC2	4583	broad.mit.edu;bcgsc.ca	37	11	1092920	1092920	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	MUC2	NM_002457	exon30	c.C4739A	p.T1580N	CACAGACCCCAAC	.	50.0	5.0	68.0	2.0	.	90
MXRA5	25878	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	3248697	3248697	+	Silent	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	MXRA5	NM_015419	exon3	c.C306T	p.L102L	AGAGCTGAGGTCT	.	35.0	17.0	55.0	0.0	.	136
NCKAP1L	3071	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	54910687	54910687	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	NCKAP1L	NM_005337	exon11	c.T1006C	p.F336L	GGCCAGTTTCATT	.	78.0	19.0	97.0	0.0	.	93
NELL1	4745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	21592455	21592455	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	NELL1	NM_006157	exon18	c.G2126T	p.W709L	ACAATTGGACCCA	.	69.0	12.0	82.0	0.0	.	155
NFU1	27247	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	69650764	69650764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	NFU1	NM_001002755	exon3	c.G252T	p.R84S	CATGGTCCTTGTC	.	90.0	25.0	98.0	0.0	.	90
NOL6	65083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	33465828	33465828	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	NOL6	NM_022917	exon19	c.G2432A	p.S811N	TCTGGGCTCTGCA	.	41.0	12.0	45.0	0.0	.	92
NOTCH1	4851	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	139405212	139405212	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	NOTCH1	NM_017617	exon17	c.G2633A	p.C878Y	TGCCGGCACGGGC	.	38.0	17.0	73.0	0.0	.	5459
NPTX2	4885	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	98257930	98257930	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	NPTX2	NM_002523	exon5	c.C1285T	p.L429F	CGTCTCCTTGACT	.	50.0	12.0	64.0	0.0	.	515
NSRP1	84081	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	28506153	28506156	+	Frame_Shift_Del	DEL	AAGG	AAGG	-	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	AAGG	AAGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	NSRP1	NM_032141	exon5	c.346_349del	p.116_117del	AGAAAAAAGGAAC	.	256.0	58.0	290.0	0.0	.	91
OR51I1	390063	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	5462429	5462429	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	OR51I1	NM_001005288	exon1	c.A316G	p.I106V	TGTGGATGAAGAA	.	70.0	20.0	75.0	0.0	.	69
PADI1	29943	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	17565194	17565194	+	Silent	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PADI1	NM_013358	exon13	c.C1542T	p.A514A	GGCAGCCCAGTTT	.	55.0	18.0	120.0	0.0	.	68
PCDH10	57575	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	134071449	134071449	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PCDH10	NM_032961	exon1	c.G154A	p.G52R	GCTCGCGGGTTTC	.	79.0	19.0	94.0	0.0	.	92
PCDHA7	56141	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	140214367	140214367	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PCDHA7	NM_031852	exon1	c.399delC	p.F133fs	GGTGTTCCCAGCG	.	328.0	94.0	405.0	0.0	.	94
PDE3A	5139	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	20766493	20766493	+	Silent	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PDE3A	NM_000921	exon3	c.C1128A	p.A376A	GAGAGCCGTGAGC	.	71.0	22.0	73.0	0.0	.	94
PLCB4	5332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	20	9449315	9449315	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PLCB4	NM_001172646	exon35	c.G3346T	p.E1116X	GAACGGGAAAGGT	.	49.0	18.0	57.0	0.0	.	274
PNLDC1	154197	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	160237044	160237044	+	Missense_Mutation	SNP	G	G	T	rs137878641	byfrequency;alternate_allele	TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PNLDC1	NM_173516	exon13	c.G1006T	p.A336S	GTTCACGCGAGCA	.	41.0	11.0	47.0	0.0	G|0.999;A|0.001	90
POSTN	10631	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	38162065	38162065	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	POSTN	NM_006475	exon5	c.G500A	p.S167N	ATGTGACTATGTA	.	317.0	102.0	356.0	0.0	.	516
PPIG	9360	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	170460700	170460700	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PPIG	NM_004792	exon4	c.G65T	p.G22V	CAGCTGGAAGAGT	.	70.0	26.0	89.0	0.0	.	92
PRDM9	56979	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	23526529	23526529	+	Silent	SNP	A	A	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PRDM9	NM_020227	exon11	c.A1332G	p.P444P	AGATCCACACAGC	.	87.0	25.0	115.0	1.0	.	139
PRKCQ	5588	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	6498670	6498670	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PRKCQ	NM_006257	exon15	c.C1613A	p.T538N	CAGAAGGTATTCG	.	72.0	16.0	50.0	0.0	.	1380
PRMT10	90826	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	148579096	148579097	+	Nonsense_Mutation	INS	-	-	AGGCTTTTTAGTTGCA	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PRMT10	NM_138364	exon8	c.1177_1178insTGCAACTAAAAAGCCT	p.D393_K394delinsCNX	TCTTATCAGGCTT	.	119.0	21.0	102.0	0.0	.	91
PRUNE2	158471	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	79320343	79320343	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PRUNE2	NM_015225	exon8	c.G6847A	p.D2283N	AAGCATCAGGAAC	.	90.0	16.0	93.0	0.0	.	157
PSMA1	5682	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	14535383	14535383	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	PSMA1	NM_148976	exon7	c.C412G	p.L138V	TAAGGAGACCAAC	.	61.0	17.0	82.0	0.0	.	92
RAG1	5896	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	36596559	36596559	+	Missense_Mutation	SNP	G	G	T	rs138101978		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	RAG1	NM_000448	exon2	c.G1705T	p.A569S	GTGTCTGCTTTGA	.	62.0	18.0	80.0	1.0	G|1.000;T|0.000	230
SCN1B	6324	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	35524522	35524522	+	Silent	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SCN1B	NM_001037	exon3	c.C327T	p.T109T	CATCACCAATGTC	.	65.0	26.0	73.0	1.0	.	91
SCN2A	6326	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	166229735	166229735	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SCN2A	NM_001040143	exon20	c.G3850C	p.V1284L	GTATAGGTCTCAC	.	96.0	21.0	102.0	0.0	.	142
SETD2	29072	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	47162395	47162395	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SETD2	NM_014159	exon3	c.C3731T	p.P1244L	ACATGTGGTATCT	.	71.0	7.0	79.0	0.0	.	1273
SEZ6L2	26470	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	29891311	29891311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SEZ6L2	NM_001243332	exon9	c.C1447T	p.P483S	CCCCTGGGCGATA	.	50.0	14.0	61.0	0.0	.	92
SIGLEC9	27180	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	51630358	51630358	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SIGLEC9	NM_001198558	exon4	c.G820A	p.V274I	TGTGCAGTTGATG	.	40.0	8.0	52.0	0.0	.	91
SLC47A1	55244	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	19459199	19459199	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SLC47A1	NM_018242	exon9	c.A830G	p.Y277C	GGGCCTATGAGGT	.	22.0	7.0	25.0	0.0	.	90
SOX2	6657	ucsc.edu;mdanderson.org	37	3	181431520	181431520	+	RNA	SNP	T	T	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SOX2	.	.	.	.	TAATATTTAGAGC	.	198.0	61.0	251.0	0.0	.	650
SPANXC	64663	broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	140335728	140335728	+	Silent	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SPANXC	NM_022661	exon2	c.C216A	p.A72A	CTCTCGGGCGTGG	.	308.0	165.0	219.0	0.0	.	62
SPANXE	171489	broad.mit.edu;bcgsc.ca	37	X	140785700	140785700	+	Silent	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	.	NM_145665	exon2	c.C216A	p.A72A	CTTTCGGGCGTGG	.	552.0	95.0	397.0	0.0	.	.
SPRR1B	6699	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	153004986	153004986	+	Silent	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	SPRR1B	NM_003125	exon2	c.G165A	p.E55E	GCCCGAGCCCTGC	.	66.0	9.0	86.0	0.0	.	69
TFAP2E	339488	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	36060160	36060160	+	Silent	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	TFAP2E	NM_178548	exon7	c.C1212T	p.A404A	CACTGCCTTCCAG	.	44.0	10.0	73.0	0.0	.	90
TFG	10342	broad.mit.edu;mdanderson.org	37	3	100467366	100467366	+	Silent	SNP	T	T	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	TFG	NM_006070	exon8	c.T1194G	p.G398G	ACCTGGTTATCGA	.	23.0	6.0	32.0	0.0	.	861
TLN2	83660	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	63031555	63031555	+	Silent	SNP	A	A	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	TLN2	NM_015059	exon28	c.A3696G	p.P1232P	ACCTCCAAGCACG	.	37.0	7.0	37.0	0.0	.	573
TMPRSS13	84000	ucsc.edu;bcgsc.ca	37	11	117782522	117782522	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	TMPRSS13	NM_001206790	exon6	c.T863A	p.I288N	CTCAAGATTGAGA	.	31.0	4.0	51.0	0.0	.	91
TPO	7173	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	1499804	1499804	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	TPO,NS,carcinoma,0	TPO	NM_001206744	exon12	c.C2050T	p.R684C	CAGAGGCGTGAGC	.	36.0	12.0	32.0	0.0	.	332
TSTA3	7264	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	144695934	144695934	+	Silent	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	TSTA3	NM_003313	exon8	c.C717T	p.P239P	GATGATGGGCTCC	.	122.0	43.0	70.0	0.0	.	91
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	179439946	179439946	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	TTN	NM_001267550	exon326	c.T70913G	p.I23638S	TGATAGATGCCAC	.	53.0	15.0	77.0	0.0	.	636
VPS13C	54832	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	15	62226473	62226473	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	VPS13C	NM_020821	exon49	c.T5813G	p.F1938C	AAGTCAAATTGGA	.	236.0	10.0	280.0	0.0	.	92
VPS72	6944	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	151158055	151158055	+	Silent	SNP	C	C	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	VPS72	NM_001271087	exon3	c.G312T	p.P104P	ACCAGCCGGGGTG	.	139.0	36.0	97.0	0.0	.	154
VSIG4	11326	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	65253415	65253415	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	VSIG4	NM_001100431	exon2	c.A313G	p.M105V	CATCCATCTCCAG	.	62.0	27.0	52.0	0.0	.	130
WNT2	7472	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	116960721	116960721	+	Silent	SNP	G	G	A	rs139486726		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	WNT2	NM_003391	exon2	c.C210T	p.A70A	CCACTCGGCCACG	.	50.0	13.0	36.0	0.0	G|1.000;A|0.000	1011
ZCCHC2	54877	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	60241963	60241963	+	Silent	SNP	T	T	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ZCCHC2	NM_017742	exon13	c.T2649G	p.P883P	GGTGCCTCAAATT	.	102.0	25.0	114.0	0.0	.	432
ZNF230	7773	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	44515439	44515440	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ZNF230	NM_006300	exon5	c.1248_1249insA	p.R416fs	CTGCCGGAAAAAA	.	113.0	24.0	120.0	0.0	.	90
ZNF362	149076	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	33760792	33760792	+	Silent	SNP	C	C	G	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ZNF362	NM_152493	exon8	c.C1032G	p.P344P	GTGTCCCAACTGC	.	171.0	40.0	226.0	1.0	.	68
ZNF469	84627	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	88494198	88494198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	.	NM_001127464	exon1	c.G320T	p.R107M	CCTCAAGGCTGGC	.	36.0	9.0	41.0	0.0	.	.
ZNF608	57507	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	123979216	123979216	+	Silent	SNP	G	G	A	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	ZNF608,NS,carcinoma,-1	ZNF608	NM_020747	exon6	c.C4284T	p.S1428S	AGACTTGCTGCGG	.	110.0	27.0	119.0	0.0	.	229
ZNF804A	91752	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	185800549	185800549	+	Silent	SNP	T	T	C	novel		TCGA-K7-A6G5-01A-11D-A30V-10	TCGA-K7-A6G5-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	1ba1022c-bdf7-464b-a527-f69dd5bac5be	9878f24b-c9b2-4b3b-9cf2-d4ad1132ee86	.	ZNF804A	NM_194250	exon4	c.T426C	p.V142V	AACTGTTACTGTG	.	66.0	19.0	70.0	0.0	.	163
